Cp4.1LG20g02410 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g02410
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	spermidine synthase 1-like
Location	Cp4.1LG20: 1318380 .. 1320977 (-)
RNA-Seq Expression	Cp4.1LG20g02410
Synteny	Cp4.1LG20g02410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTTCAAAACGACACCATCGTCACTGACCATACTCGACCCATCACAATCGTTCAAAATGGCGCCTCTTTTGTGCCAACATTTCCAGATTGCTACGTCAATATTGATGAAGAATTTCCTGGTAATATACATTAAAAGTCATCTCACGAACACAAAATTATAACTCGTTATTAACCATTATTTTAATGATGTGATTAAATAAATAGGGGAGGCACATGTGTATAAGCAAGAGAAGGTCATATTCCAAGGCAAATCCCAGTATCAAGATTTTTTTGTTTTTCAGGTTTTTTTTTTTATCTTTTATATATATGTATATATAATTTTCTTGAATTTATTGTTATTATTGACTAATTTTTACTGATTTTATTTATTTATTTTTTATTAAATTTGAGTCACAAACATATGGGAAGATTGCTATATTGGATGGCTGCCTTCAGCTAACAGAGAAGGATGAGTGTTCTTATCAGGAAATGCTCACTCATCTCCCACTCTGTTCTATTCCCAATCCCAAAAAGGTTCTTTTTTTTCTTCTTTTATATATATATATATATATATATAAATGACGGTTAACTGACTAATCGTTACTTTATAGGTTTTGTTGATTGGAGGCGGGGATGGAGGAATTCTTCGAGAAATATCTCGACATGTTTCCGTTGAGCAAATTGACATTTGTGAGCTTGATGAAATGGTGATAAATGTGAGTACATGGTTTAAATTGATATAATTATTAGTTTTGAGTTTTAATTCATACGACCTAGCAAAAACAAATTTTTAGTAAAAATAAGTGATCTCACATGATCTATTGCTCAACCTTCACTTTTTGGAGCTTTCTCTGCTCGATCGGTAAGTCATTGATGTTTCCAGCTTTGTAGCTAACAATGGCATTAGGTTTAACAAACTTAGACAAGAACATGCATGGATGAAATTATGAGTGTTTTACCTTCAGGTTTACAAGGAGTTTTTCCCGGACATTGCCATTGGGTACGTGGATCCTCGTGTGCATGTACACATAGGCGACGGTAGGAAACAGAAAACTACATGTCGTTCGAGGAGTGTTATCGGGTTTTGTGTTTCGTAAAGTTGTCTGACTGTTGTAAACGTTGTTGTTGTTATTTCAGGTGTGGCCTTCATCAAGTCTGTTCCTCCAGGCACCTATGATGCTATCATAATTGATGCATTTCGAGGGATGGGTATGTGATTTTTCACTCATTGTTCACAAAAACTGCGAACAAAAAACTGAAGTTAACAAACATGGCAGCAAACAAATCTTTGGTAATGAAATATCATAATTTTTACCTTAAAGAGAAGCTGAAGCCATTGTTGAATGTGGATATCAGGAGCTTATGCAACCGAGCTTTCGGACGAAGACTTCCTTAAGTCGATCGCTAAGGCTCTGAAGCCGGGTGGAGTACTGTCGGCTCAAGCAGACAGCGTGTGGATCAAGAATTTCACCATGGAAGACACCATAACTCGCTGTCGTAACATCTTCAAGGGCTCTGTAAACTACGCTTGGACCTCTGTTCCTTCATATCCAAGGCAAACCAACCAAACCCAATAATTCTTTACTCTTATGCTTCTGCACAATCTGTAGTTTTCTGATGGTTTCTTTCCAAATTCAGTGGGGCAATCGGCTTCGTGCTTTGTTCGACCAACGGTCCTTCGGTCGTCGACTTCAAACACCCAGTGAACCAGTTGGACCCAGAAAATTTTGGTGTTGCAAATGGACCCCCCAAGTTCTATAACTCAGAGGTGGTTCCCTTGGTTCATATTTGTTCATGAGCCTATGCTATTCATGTCACTTCTAAGTTCTAACTAATTGCCTATGTTTTGCTGTTTAGATCCATACTGCTGCCTTTTGTCTTCCTACGTTCGCTAAGTCGAAGATGGGTTCTACGTATGCATGAGAAACTCGGAGCTATAGGTATAAGAACATGCAAGTGTGTTGCATTCTATCAATAAGAGAAGTCCTATATAGCCTATACTAAAGTGTAGCAAAATCAGTGCTTACTGAACTGTAGGATGAAGGAAATTGTTGTCATTTCTAATATAAATGGATGTATCGTTCTATCACAATGGGAGATGTCTGATTTCAAGATCTTTTGGTTGCATAGACTTTATACAAAGATAATGAGGTAGAAAAAAATAGACAAACAGAAACACTAGAACTCCGAGGTCAGCTTCTTCGCCAACAGCTGGTCGACGAGGGTTAGTCCAGTATATCTGGCTTGCGCACCACATGGAATATAGTGTAGCTACTACTATAATAAGCTTAACCGACTGATACGATTGTTTAGGAATCGACTTCGCGGACTTCACTCTGTGTCGTAAAGAAGCATGAATTGAATGGTATATTTTGAGGGCATGCTTAACATTTAAGAAAACTCTAATGACAAACGAAGTAAATGAATATAATTGGTATCCACGAACCTGTTAATGTAAACAAAGCCGCCAATTAAGCAAGTGCACAAGAATCCAATCACCATAACAGCATCTGGGTTAATTGGTGCTCGGTTCTCCCACCAACCAGTGCTCAATATCCAAGTGTACATCGATGAATGCCCGTTTTCCTGCAAATTTGACGATACAGATATAATA

mRNA sequence

ATGGCCTTTCAAAACGACACCATCGTCACTGACCATACTCGACCCATCACAATCGTTCAAAATGGCGCCTCTTTTGTGCCAACATTTCCAGATTGCTACGTCAATATTGATGAAGAATTTCCTGGGGAGGCACATGTGTATAAGCAAGAGAAGGTCATATTCCAAGGCAAATCCCAGTATCAAGATTTTTTTGTTTTTCAGCTAACAGAGAAGGATGAGTGTTCTTATCAGGAAATGCTCACTCATCTCCCACTCTGTTCTATTCCCAATCCCAAAAAGGTTTACAAGGAGTTTTTCCCGGACATTGCCATTGGGTACGTGGATCCTCGTGTGCATGTACACATAGGCGACGGTGTGGCCTTCATCAAGTCTGTTCCTCCAGGCACCTATGATGCTATCATAATTGATGCATTTCGAGGGATGGGAGCTTATGCAACCGAGCTTTCGGACGAAGACTTCCTTAAGTCGATCGCTAAGGCTCTGAAGCCGGGTGGAGTACTGTCGGCTCAAGCAGACAGCGTTGGGGCAATCGGCTTCGTGCTTTGTTCGACCAACGGTCCTTCGGTCGTCGACTTCAAACACCCAGTGAACCAGTTGGACCCAGAAAATTTTGGTGTTGCAAATGGACCCCCCAAGTTCTATAACTCAGAGATCCATACTGCTGCCTTTTGTCTTCCTACGTTCGCTAAGTCGAAGATGGGTTCTACGTATGCATGAGAAACTCGGAGCTATAGGTATAAGAACATGCAAGTGTGTTGCATTCTATCAATAAGAGAAGTCCTATATAGCCTATACTAAAGTGTAGCAAAATCAGTGCTTACTGAACTGTAGGATGAAGGAAATTGTTGTCATTTCTAATATAAATGGATGTATCGTTCTATCACAATGGGAGATGTCTGATTTCAAGATCTTTTGGTTGCATAGACTTTATACAAAGATAATGAGGTAGAAAAAAATAGACAAACAGAAACACTAGAACTCCGAGGTCAGCTTCTTCGCCAACAGCTGGTCGACGAGGGTTAGTCCAGTATATCTGGCTTGCGCACCACATGGAATATAGTGTAGCTACTACTATAATAAGCTTAACCGACTGATACGATTGTTTAGGAATCGACTTCGCGGACTTCACTCTGTGTCGTAAAGAAGCATGAATTGAATGGTATATTTTGAGGGCATGCTTAACATTTAAGAAAACTCTAATGACAAACGAAGTAAATGAATATAATTGGTATCCACGAACCTGTTAATGTAAACAAAGCCGCCAATTAAGCAAGTGCACAAGAATCCAATCACCATAACAGCATCTGGGTTAATTGGTGCTCGGTTCTCCCACCAACCAGTGCTCAATATCCAAGTGTACATCGATGAATGCCCGTTTTCCTGCAAATTTGACGATACAGATATAATA

Coding sequence (CDS)

ATGGCCTTTCAAAACGACACCATCGTCACTGACCATACTCGACCCATCACAATCGTTCAAAATGGCGCCTCTTTTGTGCCAACATTTCCAGATTGCTACGTCAATATTGATGAAGAATTTCCTGGGGAGGCACATGTGTATAAGCAAGAGAAGGTCATATTCCAAGGCAAATCCCAGTATCAAGATTTTTTTGTTTTTCAGCTAACAGAGAAGGATGAGTGTTCTTATCAGGAAATGCTCACTCATCTCCCACTCTGTTCTATTCCCAATCCCAAAAAGGTTTACAAGGAGTTTTTCCCGGACATTGCCATTGGGTACGTGGATCCTCGTGTGCATGTACACATAGGCGACGGTGTGGCCTTCATCAAGTCTGTTCCTCCAGGCACCTATGATGCTATCATAATTGATGCATTTCGAGGGATGGGAGCTTATGCAACCGAGCTTTCGGACGAAGACTTCCTTAAGTCGATCGCTAAGGCTCTGAAGCCGGGTGGAGTACTGTCGGCTCAAGCAGACAGCGTTGGGGCAATCGGCTTCGTGCTTTGTTCGACCAACGGTCCTTCGGTCGTCGACTTCAAACACCCAGTGAACCAGTTGGACCCAGAAAATTTTGGTGTTGCAAATGGACCCCCCAAGTTCTATAACTCAGAGATCCATACTGCTGCCTTTTGTCTTCCTACGTTCGCTAAGTCGAAGATGGGTTCTACGTATGCATGA

Protein sequence

MAFQNDTIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGKSQYQDFFVFQLTEKDECSYQEMLTHLPLCSIPNPKKVYKEFFPDIAIGYVDPRVHVHIGDGVAFIKSVPPGTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSVGAIGFVLCSTNGPSVVDFKHPVNQLDPENFGVANGPPKFYNSEIHTAAFCLPTFAKSKMGSTYA

Homology

[Close]

BLAST of Cp4.1LG20g02410 vs. ExPASy Swiss-Prot
Match: Q96557 (Spermidine synthase 2 OS=Datura stramonium OX=4076 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.2e-59
Identity = 129/285 (45.26%), Postives = 164/285 (57.54%), Query Frame = 0


Query: 30  PDCYVNIDEEFPGEAHVYKQEKVIFQGKSQYQDFFVF---------------QLTEKDEC 89
           P  +  I   +PGEAH  K EK++FQGKS YQD  VF               QLTE+DEC
Sbjct: 27  PGWFSEISPLWPGEAHSLKVEKILFQGKSDYQDVMVFQSTTYGKVLVLDGVIQLTERDEC 86

Query: 90  SYQEMLTHLPLCSIPNPKKVY-----------------------------------KEFF 149
           +YQEM+THLPLCSIPNPKKV                                    K+FF
Sbjct: 87  AYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVEVAKQFF 146

Query: 150 PDIAIGYVDPRVHVHIGDGVAFIKSVPPGTYDAIIIDAFRGMGAYATELSDEDFLKSIAK 209
           PD+A+GY DPRV++HIGDGVAF+K+VP GTYDA+I+D+   +G  A EL ++ F ++IA+
Sbjct: 147 PDVAVGYEDPRVNLHIGDGVAFLKNVPAGTYDAVIVDSSDPIGP-AQELFEKPFFETIAR 206

Query: 210 ALKPGGVLSAQADSV----------------------------------GAIGFVLCSTN 231
           AL+PGGV+S QA+S+                                  G IGF+LCST 
Sbjct: 207 ALRPGGVVSTQAESIWLHMHIIEEIVANCREIFKGSVNYAWTTVPTYPSGMIGFMLCSTE 266

[Close]

BLAST of Cp4.1LG20g02410 vs. ExPASy Swiss-Prot
Match: Q9ZTR0 (Spermidine synthase 2 OS=Pisum sativum OX=3888 GN=SPDSYN2 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.2e-58
Identity = 131/299 (43.81%), Postives = 168/299 (56.19%), Query Frame = 0


Query: 21  NGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGKSQYQDFFVF-------------- 80
           NG S V   P  +  I   +PGEAH  K EK++FQGKS+YQ   VF              
Sbjct: 45  NGVSSV--IPGWFSEISPMWPGEAHSLKIEKILFQGKSEYQKVMVFQSSTYGKVLVLDGV 104

Query: 81  -QLTEKDECSYQEMLTHLPLCSIPNPKKVY------------------------------ 140
            QLTE+DEC+YQEM+THLPLCSIPNPKKV                               
Sbjct: 105 IQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHSSIEKIDICEIDNM 164

Query: 141 -----KEFFPDIAIGYVDPRVHVHIGDGVAFIKSVPPGTYDAIIIDAFRGMGAYATELSD 200
                K+FFP++A+G+ DPRV + IGDGVAF+K+ P GTYDA+I+D+   +G  A EL +
Sbjct: 165 VVEVSKQFFPEVAVGFNDPRVTLRIGDGVAFLKAAPEGTYDAVIVDSSDPIGP-AQELFE 224

Query: 201 EDFLKSIAKALKPGGVLSAQADSV----------------------------------GA 236
           + F +S+A+AL+PGGV+  QA+S+                                  G 
Sbjct: 225 KPFFQSVARALRPGGVMCTQAESIWLHMDIIEDIVSNCRHIFKGSVNYAWTTVPTYPSGM 284

[Close]

BLAST of Cp4.1LG20g02410 vs. ExPASy Swiss-Prot
Match: Q9ZS45 (Spermidine synthase OS=Solanum lycopersicum OX=4081 GN=SPDSYN PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-57
Identity = 128/285 (44.91%), Postives = 163/285 (57.19%), Query Frame = 0


Query: 30  PDCYVNIDEEFPGEAHVYKQEKVIFQGKSQYQDFFVF---------------QLTEKDEC 89
           P  +  I   +PGEAH  K EK++FQGKS YQ+  VF               QLTE+DEC
Sbjct: 52  PGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVLVFQSSTYGKVLVLDGVIQLTERDEC 111

Query: 90  SYQEMLTHLPLCSIPNPKKVY-----------------------------------KEFF 149
           +YQEM+THLPLCSIPNPKKV                                    K+FF
Sbjct: 112 AYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVEVAKQFF 171

Query: 150 PDIAIGYVDPRVHVHIGDGVAFIKSVPPGTYDAIIIDAFRGMGAYATELSDEDFLKSIAK 209
           PD+A+GY DPRV++HIGDGVAF+K+VP GTYDA+I+D+   +G  A EL ++ F +SIAK
Sbjct: 172 PDVAVGYEDPRVNLHIGDGVAFLKNVPAGTYDAVIVDSSDPIGP-AQELFEKPFFESIAK 231

Query: 210 ALKPGGVLSAQADSV----------------------------------GAIGFVLCSTN 231
           AL+PGGV+S QA+S+                                  G IGF+LCST 
Sbjct: 232 ALRPGGVVSTQAESIWLHMHIIEEIVANCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTE 291

[Close]

BLAST of Cp4.1LG20g02410 vs. ExPASy Swiss-Prot
Match: O48658 (Spermidine synthase 1 OS=Hyoscyamus niger OX=4079 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-57
Identity = 128/285 (44.91%), Postives = 162/285 (56.84%), Query Frame = 0


Query: 30  PDCYVNIDEEFPGEAHVYKQEKVIFQGKSQYQDFFVF---------------QLTEKDEC 89
           P  +  I   +PGEAH  K EK++FQGKS YQ+  VF               QLTE+DEC
Sbjct: 25  PGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDEC 84

Query: 90  SYQEMLTHLPLCSIPNPKKVY-----------------------------------KEFF 149
           +YQEM+THLPLCSIPNPKKV                                    KEFF
Sbjct: 85  AYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVEVAKEFF 144

Query: 150 PDIAIGYVDPRVHVHIGDGVAFIKSVPPGTYDAIIIDAFRGMGAYATELSDEDFLKSIAK 209
           PD+A+GY DPRV++HIGDGVAF+K+VP GTYDA+I+D+   +G  A EL ++ F +SIA+
Sbjct: 145 PDVAVGYEDPRVNLHIGDGVAFLKNVPAGTYDAVIVDSSDPIGP-AQELFEKPFFESIAR 204

Query: 210 ALKPGGVLSAQADSV----------------------------------GAIGFVLCSTN 231
           AL+PGGV+S QA+S+                                  G IGF+LCST 
Sbjct: 205 ALRPGGVVSTQAESIWLHMHIIEEIVANCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTE 264

[Close]

BLAST of Cp4.1LG20g02410 vs. ExPASy Swiss-Prot
Match: Q9ZTR1 (Spermidine synthase 1 OS=Pisum sativum OX=3888 GN=SPDSYN1 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-57
Identity = 132/299 (44.15%), Postives = 165/299 (55.18%), Query Frame = 0


Query: 21  NGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGKSQYQDFFVF-------------- 80
           NG S V   P  +  I   +PGEAH  K EK++FQGKS YQD  VF              
Sbjct: 37  NGLSSV--IPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVMVFQSATYGKVLILDGV 96

Query: 81  -QLTEKDECSYQEMLTHLPLCSIPNPKKVY------------------------------ 140
            QLTE+DEC+YQEM+THLPLCSIPNPKKV                               
Sbjct: 97  IQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHSSVEKIDICEIDKM 156

Query: 141 -----KEFFPDIAIGYVDPRVHVHIGDGVAFIKSVPPGTYDAIIIDAFRGMGAYATELSD 200
                KE+FPDIA+G+ DPRV ++IGDGVAF+K+ P GTYDA+I+D+   +G  A EL +
Sbjct: 157 VVDVSKEYFPDIAVGFADPRVTLNIGDGVAFLKAAPEGTYDAVIVDSSDPIGP-AQELFE 216

Query: 201 EDFLKSIAKALKPGGVLSAQADSV----------------------------------GA 236
           + F +S+A+AL+PGGV+  QA+S+                                  G 
Sbjct: 217 KPFFESVARALRPGGVVCTQAESIWLHMHIIEDIVVNCRQVFKGSVNYAWTTVPTYPSGM 276

[Close]

BLAST of Cp4.1LG20g02410 vs. NCBI nr
Match: XP_023519819.1 (spermidine synthase 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 450 bits (1158), Expect = 7.43e-158
Identity = 238/322 (73.91%), Postives = 238/322 (73.91%), Query Frame = 0


Query: 1   MAFQNDTIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGKSQY 60
           MAFQNDTIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGKSQY
Sbjct: 1   MAFQNDTIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGKSQY 60

Query: 61  QDFFVFQ---------------LTEKDECSYQEMLTHLPLCSIPNPKKV----------- 120
           QDFFVFQ               LTEKDECSYQEMLTHLPLCSIPNPKKV           
Sbjct: 61  QDFFVFQSQTYGKIAILDGCLQLTEKDECSYQEMLTHLPLCSIPNPKKVLLIGGGDGGIL 120

Query: 121 ------------------------YKEFFPDIAIGYVDPRVHVHIGDGVAFIKSVPPGTY 180
                                   YKEFFPDIAIGYVDPRVHVHIGDGVAFIKSVPPGTY
Sbjct: 121 REISRHVSVEQIDICELDEMVINVYKEFFPDIAIGYVDPRVHVHIGDGVAFIKSVPPGTY 180

Query: 181 DAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSV---------------- 238
           DAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSV                
Sbjct: 181 DAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSVWIKNFTMEDTITRCRN 240

[Close]

BLAST of Cp4.1LG20g02410 vs. NCBI nr
Match: XP_022923862.1 (spermidine synthase 1-like [Cucurbita moschata])

HSP 1 Score: 431 bits (1107), Expect = 4.81e-150
Identity = 231/325 (71.08%), Postives = 234/325 (72.00%), Query Frame = 0


Query: 1   MAFQN---DTIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK 60
           MAFQN    TIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK
Sbjct: 1   MAFQNHDASTIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK 60

Query: 61  SQYQDFFVFQ---------------LTEKDECSYQEMLTHLPLCSIPNPKKV-------- 120
           SQYQDFFVFQ               LTEKDECSYQEMLTHLPLCSIPNP+KV        
Sbjct: 61  SQYQDFFVFQSQTYGKIAILDGCLQLTEKDECSYQEMLTHLPLCSIPNPRKVLLIGGGDG 120

Query: 121 ---------------------------YKEFFPDIAIGYVDPRVHVHIGDGVAFIKSVPP 180
                                      YKEFFPDIAIGYVDPRV+VHIGDGVAFIKSVPP
Sbjct: 121 GILREISRHDSVEQIDICELDEMVINVYKEFFPDIAIGYVDPRVNVHIGDGVAFIKSVPP 180

Query: 181 GTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSV------------- 238
           GTYDAIIIDAF GMGAYATELSDEDFLKSIAKALKPGGVLSAQADSV             
Sbjct: 181 GTYDAIIIDAFPGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSVWIKNFTMEDTITR 240

[Close]

BLAST of Cp4.1LG20g02410 vs. NCBI nr
Match: XP_023000661.1 (spermidine synthase 1-like [Cucurbita maxima])

HSP 1 Score: 430 bits (1105), Expect = 9.70e-150
Identity = 230/325 (70.77%), Postives = 235/325 (72.31%), Query Frame = 0


Query: 1   MAFQN---DTIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK 60
           MAFQN    TIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK
Sbjct: 1   MAFQNLDAPTIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK 60

Query: 61  SQYQDFFVFQ---------------LTEKDECSYQEMLTHLPLCSIPNPKKV-------- 120
           SQYQDFFVFQ               LTEKDECSYQEMLTHLPLCSIPNPKKV        
Sbjct: 61  SQYQDFFVFQSQTYGKIAILDGCLQLTEKDECSYQEMLTHLPLCSIPNPKKVLLIGGGDG 120

Query: 121 ---------------------------YKEFFPDIAIGYVDPRVHVHIGDGVAFIKSVPP 180
                                      YKEFFPDIAIGYVDPRV+VHIG+GVAFIKSVPP
Sbjct: 121 GILREISRHASVEQIDICELDEMVINVYKEFFPDIAIGYVDPRVNVHIGNGVAFIKSVPP 180

Query: 181 GTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSV------------- 238
           GTYD+IIIDAFRGMGAYATELSDE FLKSIAKALKPGGVLSAQADSV             
Sbjct: 181 GTYDSIIIDAFRGMGAYATELSDEGFLKSIAKALKPGGVLSAQADSVWIKNFTMEDTITR 240

[Close]

BLAST of Cp4.1LG20g02410 vs. NCBI nr
Match: KAG7019827.1 (hypothetical protein SDJN02_18791, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347 bits (890), Expect = 7.16e-118
Identity = 194/291 (66.67%), Postives = 197/291 (67.70%), Query Frame = 0


Query: 1   MAFQN---DTIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK 60
           MAFQN    TIVTDHTRPITI+ NGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK
Sbjct: 1   MAFQNHDASTIVTDHTRPITIIPNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK 60

Query: 61  SQYQDFFVFQ---------------LTEKDECSYQEMLTHLPLCSIPNPKKV-------- 120
           SQYQDFFVFQ               LTEKDECSYQEMLTHLPLCSIPNPKKV        
Sbjct: 61  SQYQDFFVFQSQTYGKIAILDGCLQLTEKDECSYQEMLTHLPLCSIPNPKKVLLIGGGDG 120

Query: 121 ---------------------------YKEFFPDIAIGYVDPRVHVHIGDGVAFIKSVPP 180
                                      YKEFFPDIAIGYVDPRV+VHIGDGVAFIKSVPP
Sbjct: 121 GILREISRHASVEQIDICELDEMVINVYKEFFPDIAIGYVDPRVNVHIGDGVAFIKSVPP 180

Query: 181 GTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSVGAIGFVLCSTNGP 238
           GTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSV    F +  T   
Sbjct: 181 GTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSVWIENFTMEDTITR 240

[Close]

BLAST of Cp4.1LG20g02410 vs. NCBI nr
Match: XP_008446082.2 (PREDICTED: spermidine synthase 1-like [Cucumis melo])

HSP 1 Score: 317 bits (812), Expect = 4.46e-105
Identity = 182/329 (55.32%), Postives = 200/329 (60.79%), Query Frame = 0


Query: 7   TIVTDHTRPITI-------------VQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVI 66
           TI T+   PI I             VQ+G SF P FP CYV+I   +P + HVYK EKVI
Sbjct: 6   TIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYVDIAPFYPEQGHVYKVEKVI 65

Query: 67  FQGKSQYQDFFVFQ---------------LTEKDECSYQEMLTHLPLCSIPNPKKV---- 126
           F+GKSQYQD FVFQ               LTEKDE +YQEMLTHLPLCSIPNPKKV    
Sbjct: 66  FKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIG 125

Query: 127 -------------------------------YKEFFPDIAIGYVDPRVHVHIGDGVAFIK 186
                                          YK+ FPDIAIGY DPRV+ +IGDGVAFIK
Sbjct: 126 GGDGGILREVSRHACVEQIDICDLDKMVIDVYKKHFPDIAIGYKDPRVNSYIGDGVAFIK 185

Query: 187 SVPPGTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSV--------- 238
           SVPP TYDAIIIDAF+GMGAYATELS+ED LKSIAKALKPGGV+SA ADS+         
Sbjct: 186 SVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVMSAPADSIWLNNFAMED 245

[Close]

BLAST of Cp4.1LG20g02410 vs. ExPASy TrEMBL
Match: A0A6J1E7A6 (spermidine synthase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431452 PE=3 SV=1)

HSP 1 Score: 431 bits (1107), Expect = 2.33e-150
Identity = 231/325 (71.08%), Postives = 234/325 (72.00%), Query Frame = 0


Query: 1   MAFQN---DTIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK 60
           MAFQN    TIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK
Sbjct: 1   MAFQNHDASTIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK 60

Query: 61  SQYQDFFVFQ---------------LTEKDECSYQEMLTHLPLCSIPNPKKV-------- 120
           SQYQDFFVFQ               LTEKDECSYQEMLTHLPLCSIPNP+KV        
Sbjct: 61  SQYQDFFVFQSQTYGKIAILDGCLQLTEKDECSYQEMLTHLPLCSIPNPRKVLLIGGGDG 120

Query: 121 ---------------------------YKEFFPDIAIGYVDPRVHVHIGDGVAFIKSVPP 180
                                      YKEFFPDIAIGYVDPRV+VHIGDGVAFIKSVPP
Sbjct: 121 GILREISRHDSVEQIDICELDEMVINVYKEFFPDIAIGYVDPRVNVHIGDGVAFIKSVPP 180

Query: 181 GTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSV------------- 238
           GTYDAIIIDAF GMGAYATELSDEDFLKSIAKALKPGGVLSAQADSV             
Sbjct: 181 GTYDAIIIDAFPGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSVWIKNFTMEDTITR 240

[Close]

BLAST of Cp4.1LG20g02410 vs. ExPASy TrEMBL
Match: A0A6J1KGF9 (spermidine synthase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495031 PE=3 SV=1)

HSP 1 Score: 430 bits (1105), Expect = 4.70e-150
Identity = 230/325 (70.77%), Postives = 235/325 (72.31%), Query Frame = 0


Query: 1   MAFQN---DTIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK 60
           MAFQN    TIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK
Sbjct: 1   MAFQNLDAPTIVTDHTRPITIVQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGK 60

Query: 61  SQYQDFFVFQ---------------LTEKDECSYQEMLTHLPLCSIPNPKKV-------- 120
           SQYQDFFVFQ               LTEKDECSYQEMLTHLPLCSIPNPKKV        
Sbjct: 61  SQYQDFFVFQSQTYGKIAILDGCLQLTEKDECSYQEMLTHLPLCSIPNPKKVLLIGGGDG 120

Query: 121 ---------------------------YKEFFPDIAIGYVDPRVHVHIGDGVAFIKSVPP 180
                                      YKEFFPDIAIGYVDPRV+VHIG+GVAFIKSVPP
Sbjct: 121 GILREISRHASVEQIDICELDEMVINVYKEFFPDIAIGYVDPRVNVHIGNGVAFIKSVPP 180

Query: 181 GTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSV------------- 238
           GTYD+IIIDAFRGMGAYATELSDE FLKSIAKALKPGGVLSAQADSV             
Sbjct: 181 GTYDSIIIDAFRGMGAYATELSDEGFLKSIAKALKPGGVLSAQADSVWIKNFTMEDTITR 240

[Close]

BLAST of Cp4.1LG20g02410 vs. ExPASy TrEMBL
Match: A0A1S3BF22 (spermidine synthase 1-like OS=Cucumis melo OX=3656 GN=LOC103488909 PE=3 SV=1)

HSP 1 Score: 317 bits (812), Expect = 2.16e-105
Identity = 182/329 (55.32%), Postives = 200/329 (60.79%), Query Frame = 0


Query: 7   TIVTDHTRPITI-------------VQNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVI 66
           TI T+   PI I             VQ+G SF P FP CYV+I   +P + HVYK EKVI
Sbjct: 6   TIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYVDIAPFYPEQGHVYKVEKVI 65

Query: 67  FQGKSQYQDFFVFQ---------------LTEKDECSYQEMLTHLPLCSIPNPKKV---- 126
           F+GKSQYQD FVFQ               LTEKDE +YQEMLTHLPLCSIPNPKKV    
Sbjct: 66  FKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIG 125

Query: 127 -------------------------------YKEFFPDIAIGYVDPRVHVHIGDGVAFIK 186
                                          YK+ FPDIAIGY DPRV+ +IGDGVAFIK
Sbjct: 126 GGDGGILREVSRHACVEQIDICDLDKMVIDVYKKHFPDIAIGYKDPRVNSYIGDGVAFIK 185

Query: 187 SVPPGTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSV--------- 238
           SVPP TYDAIIIDAF+GMGAYATELS+ED LKSIAKALKPGGV+SA ADS+         
Sbjct: 186 SVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVMSAPADSIWLNNFAMED 245

[Close]

BLAST of Cp4.1LG20g02410 vs. ExPASy TrEMBL
Match: A0A6J1C7X6 (spermidine synthase 1-like OS=Momordica charantia OX=3673 GN=LOC111009053 PE=3 SV=1)

HSP 1 Score: 311 bits (797), Expect = 4.64e-103
Identity = 175/322 (54.35%), Postives = 194/322 (60.25%), Query Frame = 0


Query: 12  HTRPITIV-----------QNGASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGKSQY 71
           H  P+ +V           QN AS  P FP  Y ++   +P EAHVYK EK+IFQ KSQY
Sbjct: 17  HVTPVNVVSQNVTQNGNGIQNSASLSPVFPGYYADLAPSWPEEAHVYKIEKIIFQEKSQY 76

Query: 72  QDFFVFQ---------------LTEKDECSYQEMLTHLPLCSIPNPKKV----------- 131
           QD FVFQ               LTEKDE +YQEMLTHLPLCSIPNPKKV           
Sbjct: 77  QDLFVFQTATHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGIL 136

Query: 132 ------------------------YKEFFPDIAIGYVDPRVHVHIGDGVAFIKSVPPGTY 191
                                   YK+FFPDIA+GY DPRV+V IGDG AFIKS+PPGTY
Sbjct: 137 REVSRHSSVEHIDICDLDKMVIDVYKKFFPDIAVGYEDPRVNVTIGDGAAFIKSIPPGTY 196

Query: 192 DAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQADSV---------------- 238
           DAII+DAF+GMGAYATELSD+DFL+SIAKALKPGGV+S  ADSV                
Sbjct: 197 DAIILDAFQGMGAYATELSDKDFLESIAKALKPGGVMSTPADSVWLKNFAMEDTIALCRK 256

[Close]

BLAST of Cp4.1LG20g02410 vs. ExPASy TrEMBL
Match: A0A5A7UJN5 (Spermidine synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00590 PE=3 SV=1)

HSP 1 Score: 308 bits (788), Expect = 4.01e-102
Identity = 177/308 (57.47%), Postives = 193/308 (62.66%), Query Frame = 0


Query: 1   MAFQND-------------TIVTDHTRPITI-------------VQNGASFVPTFPDCYV 60
           MAFQN              TI T+   PI I             VQ+G SF P FP CYV
Sbjct: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV 60

Query: 61  NIDEEFPGEAHVYKQEKVIFQGKSQYQDFFVFQ---------LTEKDECSYQEMLTHLPL 120
           +I   +P + HVYK EKVIF+GKSQYQD FVFQ         LTEKDE +YQEMLTHLPL
Sbjct: 61  DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQVVILDGSLQLTEKDEFAYQEMLTHLPL 120

Query: 121 CSIPNPKKV-----------------------------------YKEFFPDIAIGYVDPR 180
           CSI NPKKV                                   YK+ FPDIAIGY DPR
Sbjct: 121 CSILNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVIDVYKKHFPDIAIGYKDPR 180

Query: 181 VHVHIGDGVAFIKSVPPGTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSAQ 238
           V+ +IGDGVAFIKSVPP TYDAIIIDAF+GMGAYATELS+ED LKSIAKALKPGGV+SA 
Sbjct: 181 VNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVMSAP 240

[Close]

BLAST of Cp4.1LG20g02410 vs. TAIR 10
Match: AT1G23820.1 (spermidine synthase 1 )

HSP 1 Score: 220.7 bits (561), Expect = 1.3e-57
Identity = 129/297 (43.43%), Postives = 165/297 (55.56%), Query Frame = 0


Query: 23  ASFVPTFPDCYVNIDEEFPGEAHVYKQEKVIFQGKSQYQDFFVF---------------Q 82
           A F    P  +  +   +PGEAH  K EKV+FQGKS YQD  VF               Q
Sbjct: 82  ACFSTVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQ 141

Query: 83  LTEKDECSYQEMLTHLPLCSIPNPKKVY-------------------------------- 142
           LTE+DEC+YQEM+THLPLCSIPNPKKV                                 
Sbjct: 142 LTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVV 201

Query: 143 ---KEFFPDIAIGYVDPRVHVHIGDGVAFIKSVPPGTYDAIIIDAFRGMGAYATELSDED 202
              K+FFPD+AIGY DPRV++ IGDGVAF+K+   G+YDA+I+D+   +G  A EL ++ 
Sbjct: 202 DVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGP-AKELFEKP 261

Query: 203 FLKSIAKALKPGGVLSAQADSV----------------------------------GAIG 236
           F +S+A+AL+PGGV+  QA+S+                                  G IG
Sbjct: 262 FFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIG 321

[Close]

BLAST of Cp4.1LG20g02410 vs. TAIR 10
Match: AT1G70310.1 (spermidine synthase 2 )

HSP 1 Score: 199.1 bits (505), Expect = 3.9e-51
Identity = 117/291 (40.21%), Postives = 159/291 (54.64%), Query Frame = 0


Query: 30  PDCYVNIDEEFPGEAHVYKQEKVIFQGKSQYQDFFVF---------------QLTEKDEC 89
           P  +  I   +PGEAH  K EK++FQGKS YQD  VF               QLTE+DEC
Sbjct: 49  PGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDEC 108

Query: 90  SYQEMLTHLPLCSIPNPKKVY-----------------------------------KEFF 149
           +YQEM+THLPLCSI NPKKV                                    K++F
Sbjct: 109 AYQEMITHLPLCSISNPKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVAKQYF 168

Query: 150 PDIAIGYVDPRVHVHIGDGVAFIKSVPPGTYDAIIIDAFRGMGAYATELSDEDFLKSIAK 209
           P++A+GY DPRV++ IGDGVAF+K+   GTYDA+I+D+   +G  A EL ++ F +S+ +
Sbjct: 169 PNVAVGYEDPRVNLIIGDGVAFLKNAAEGTYDAVIVDSSDPIGP-AKELFEKPFFESVNR 228

Query: 210 ALKPGGVLSAQADSV----------------------------------GAIGFVLCSTN 236
           AL+PGGV+  QA+S+                                  G IGF+LCS+ 
Sbjct: 229 ALRPGGVVCTQAESLWLHMDIIEDIVSNCRDIFKGSVNYAWTSVPTYPSGVIGFMLCSSE 288

[Close]

BLAST of Cp4.1LG20g02410 vs. TAIR 10
Match: AT5G53120.1 (spermidine synthase 3 )

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-43
Identity = 107/283 (37.81%), Postives = 147/283 (51.94%), Query Frame = 0


Query: 40  FPGEAHVYKQEKVIFQGKSQYQDFFVF---------------QLTEKDECSYQEMLTHLP 99
           +PGEAH  K EKV+F+ KS +Q+  VF               QLTEKDEC+YQEM+ HLP
Sbjct: 78  WPGEAHSLKVEKVLFKDKSDFQEVLVFESATYGKVLVLDGIVQLTEKDECAYQEMIAHLP 137

Query: 100 LCSIPNPKKVY-----------------------------------KEFFPDIAIGYVDP 159
           LCSI +PK V                                    K+FFP++A+G+ DP
Sbjct: 138 LCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDP 197

Query: 160 RVHVHIGDGVAFIKSVPPGTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSA 219
           RV +HIGD   F++  P G YDAII+D+   +G  A  L ++ F +++A+ALKPGGVL  
Sbjct: 198 RVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGP-ALALVEKPFFETLARALKPGGVLCN 257

Query: 220 QADSV---------------------------------GAIGFVLCSTNGPSVVDFKHPV 239
            A+S+                                 G IGFVLCST GP+ VDFK+P+
Sbjct: 258 MAESMWLHTHLIEDMISICRQTFKSVHYAWSSVPTYPSGVIGFVLCSTEGPA-VDFKNPI 317

[Close]

BLAST of Cp4.1LG20g02410 vs. TAIR 10
Match: AT5G53120.2 (spermidine synthase 3 )

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-43
Identity = 107/283 (37.81%), Postives = 147/283 (51.94%), Query Frame = 0


Query: 40  FPGEAHVYKQEKVIFQGKSQYQDFFVF---------------QLTEKDECSYQEMLTHLP 99
           +PGEAH  K EKV+F+ KS +Q+  VF               QLTEKDEC+YQEM+ HLP
Sbjct: 78  WPGEAHSLKVEKVLFKDKSDFQEVLVFESATYGKVLVLDGIVQLTEKDECAYQEMIAHLP 137

Query: 100 LCSIPNPKKVY-----------------------------------KEFFPDIAIGYVDP 159
           LCSI +PK V                                    K+FFP++A+G+ DP
Sbjct: 138 LCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDP 197

Query: 160 RVHVHIGDGVAFIKSVPPGTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSA 219
           RV +HIGD   F++  P G YDAII+D+   +G  A  L ++ F +++A+ALKPGGVL  
Sbjct: 198 RVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGP-ALALVEKPFFETLARALKPGGVLCN 257

Query: 220 QADSV---------------------------------GAIGFVLCSTNGPSVVDFKHPV 239
            A+S+                                 G IGFVLCST GP+ VDFK+P+
Sbjct: 258 MAESMWLHTHLIEDMISICRQTFKSVHYAWSSVPTYPSGVIGFVLCSTEGPA-VDFKNPI 317

[Close]

BLAST of Cp4.1LG20g02410 vs. TAIR 10
Match: AT5G53120.3 (spermidine synthase 3 )

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-43
Identity = 107/283 (37.81%), Postives = 147/283 (51.94%), Query Frame = 0


Query: 40  FPGEAHVYKQEKVIFQGKSQYQDFFVF---------------QLTEKDECSYQEMLTHLP 99
           +PGEAH  K EKV+F+ KS +Q+  VF               QLTEKDEC+YQEM+ HLP
Sbjct: 78  WPGEAHSLKVEKVLFKDKSDFQEVLVFESATYGKVLVLDGIVQLTEKDECAYQEMIAHLP 137

Query: 100 LCSIPNPKKVY-----------------------------------KEFFPDIAIGYVDP 159
           LCSI +PK V                                    K+FFP++A+G+ DP
Sbjct: 138 LCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDP 197

Query: 160 RVHVHIGDGVAFIKSVPPGTYDAIIIDAFRGMGAYATELSDEDFLKSIAKALKPGGVLSA 219
           RV +HIGD   F++  P G YDAII+D+   +G  A  L ++ F +++A+ALKPGGVL  
Sbjct: 198 RVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGP-ALALVEKPFFETLARALKPGGVLCN 257

Query: 220 QADSV---------------------------------GAIGFVLCSTNGPSVVDFKHPV 239
            A+S+                                 G IGFVLCST GP+ VDFK+P+
Sbjct: 258 MAESMWLHTHLIEDMISICRQTFKSVHYAWSSVPTYPSGVIGFVLCSTEGPA-VDFKNPI 317

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g02410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96557	2.2e-59	45.26	Spermidine synthase 2 OS=Datura stramonium OX=4076 PE=2 SV=1	[more]
Q9ZTR0	7.2e-58	43.81	Spermidine synthase 2 OS=Pisum sativum OX=3888 GN=SPDSYN2 PE=2 SV=1	[more]
Q9ZS45	1.2e-57	44.91	Spermidine synthase OS=Solanum lycopersicum OX=4081 GN=SPDSYN PE=2 SV=1	[more]
O48658	1.2e-57	44.91	Spermidine synthase 1 OS=Hyoscyamus niger OX=4079 PE=2 SV=1	[more]
Q9ZTR1	1.2e-57	44.15	Spermidine synthase 1 OS=Pisum sativum OX=3888 GN=SPDSYN1 PE=2 SV=1	[more]

BLAST of Cp4.1LG20g02410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519819.1	7.43e-158	73.91	spermidine synthase 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923862.1	4.81e-150	71.08	spermidine synthase 1-like [Cucurbita moschata]	[more]
XP_023000661.1	9.70e-150	70.77	spermidine synthase 1-like [Cucurbita maxima]	[more]
KAG7019827.1	7.16e-118	66.67	hypothetical protein SDJN02_18791, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_008446082.2	4.46e-105	55.32	PREDICTED: spermidine synthase 1-like [Cucumis melo]	[more]

BLAST of Cp4.1LG20g02410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E7A6	2.33e-150	71.08	spermidine synthase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431452 PE=3 SV...	[more]
A0A6J1KGF9	4.70e-150	70.77	spermidine synthase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495031 PE=3 SV=1	[more]
A0A1S3BF22	2.16e-105	55.32	spermidine synthase 1-like OS=Cucumis melo OX=3656 GN=LOC103488909 PE=3 SV=1	[more]
A0A6J1C7X6	4.64e-103	54.35	spermidine synthase 1-like OS=Momordica charantia OX=3673 GN=LOC111009053 PE=3 S...	[more]
A0A5A7UJN5	4.01e-102	57.47	Spermidine synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]

BLAST of Cp4.1LG20g02410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23820.1	1.3e-57	43.43	spermidine synthase 1	[more]
AT1G70310.1	3.9e-51	40.21	spermidine synthase 2	[more]
AT5G53120.1	1.0e-43	37.81	spermidine synthase 3	[more]
AT5G53120.2	1.0e-43	37.81	spermidine synthase 3	[more]
AT5G53120.3	1.0e-43	37.81	spermidine synthase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01564	Spermine_synth	coord: 94..174 e-value: 5.6E-13 score: 48.7
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 70..94 e-value: 1.4E-6 score: 29.9 coord: 95..236 e-value: 8.8E-35 score: 122.2
None	No IPR available	PANTHER	PTHR11558:SF28	SYNTHASE 1, PUTATIVE-RELATED	coord: 175..233 coord: 93..174
None	No IPR available	PANTHER	PTHR11558:SF28	SYNTHASE 1, PUTATIVE-RELATED	coord: 26..94
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 97..167 e-value: 3.26284E-5 score: 40.1059
IPR037163	Spermidine synthase, tetramerisation domain superfamily	GENE3D	2.30.140.10	Spermidine synthase, tetramerisation domain	coord: 29..69 e-value: 1.5E-5 score: 27.3
IPR001045	Spermidine/spermine synthases	PANTHER	PTHR11558	SPERMIDINE/SPERMINE SYNTHASE	coord: 26..94 coord: 93..174 coord: 175..233
IPR030374	Polyamine biosynthesis domain	PROSITE	PS51006	PABS_2	coord: 96..226 score: 13.962642
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 36..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g02410.1	Cp4.1LG20g02410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity