Cp4.1LG18g08630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Position :
0
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AAATGGCTTCTTCTTCAGCCACTTCAATTTTGAAGCCCTTATCCAAGGCAGATTCTTGCCTTCTCTCTTTGCCTTCTCTCTTCACCTGCAGACCCCCGCACTCTTTTCTCTCTTTCCCTTCCAAATTCACCACCGCCCCCTTCCATCTTTCCTCTTCTCATTGTTCTTCGCTCTTTTCCTCCTCGAAGAAGAAGACACATCTCTCATCGCTAGTTGCCTCTGTAGCCCAGTCTTCGGAGTGGGGCCAAGAAGACGATACCATCACCATTGACCCAAAACTCGGCGGCGACGAGGATGGCGAAGAAGGCCCTCATTGGGAAAATCAAGAGCTCAGTGAGAATGAGTCTCGTATTTCTGATTGGGAAGGTGAAGGTGAAGGCGAAGATGATGGAGGAAGTGAGGGTGAAGGAGGAGGAGTTTTGGAGCTGGGAGACGAGGAAGAAGGCCCTTTGGAGGAGCCAAATGAAGACGCTAAATTGTATGTTGGGAATTTGTCATATGACGTTGATAGTCAAAAGCTTGCAATGCTGTTTGAGAAGGCTGGAACTGTCGAGATTGCTGAGGTTATTTACGACCGACAATCAGATCGGAGTCGTGGTTTCGGTTTTGTGACAATGAGTAGTGTTGAAGAAGCTGAGAAAGCTGTGGATACCTTCAACCGTTATGAGTTCTTGGGGAGGACGTTGGTTGTTAATAAGGCTGCCGCCAGAGGTTCAAGGCCAGAACGCCAACCTCGAACATTTCAACCAGCTTTCAGAATCTATGTTGGTAATCTTGCATGGGAAGTAGACAGTGCACGCCTGGAGCAGGTCTTCAGTGAACATGGTAAAGTAGTAGACGCTCGGGTTCTTTACGACCGGGACAGTGGCCGTTCTCGTGGATTTGGCTTCGTGACCATGGCCGACGAAACTGGAATGAATGATGCCATTGCTGCTCTGGATGGGCAGAGCGTAGATGGAAGGGCAATCAGAGTGAATGTCGCAGAGGAAAAACCAAGGCGCAATTTC1002003004005006007008009001000Expect = 2.2E-25 / Score = 100.3Expect = 2.8E-27 / Score = 106.6Expect = 1.6E-19 / Score = 69.5Expect = 2.2E-19 / Score = 69.0Score = 19.399549Score = 17.983952Expect = 7.3E-27 / Score = 96.2Expect = 5.0E-28 / Score = 99.9Score = Score = Score = Score = Score = Expect = 1.36743E-32 / Score = 114.248Expect = 3.52623E-34 / Score = 118.485Score = Score = SequenceSM00360PF00076PS50102PS50102G3DSA:3.30.70.330G3DSA:3.30.70.330mobidb-litemobidb-litemobidb-litePTHR48025:SF8PTHR48025cd12399cd12399SSF54928SSF54928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 158..231
e-value: 2.2E-25
score: 100.3
coord: 252..325
e-value: 2.8E-27
score: 106.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 253..323
e-value: 2.2E-19
score: 69.0
coord: 159..228
e-value: 1.6E-19
score: 69.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 251..329
score: 19.399549
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 157..235
score: 17.983952
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 92..240
e-value: 7.3E-27
score: 96.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 241..335
e-value: 5.0E-28
score: 99.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..152
NoneNo IPR availablePANTHERPTHR48025:SF8RIBONUCLEOPROTEINcoord: 1..334
NoneNo IPR availablePANTHERPTHR48025OS02G0815200 PROTEINcoord: 1..334
NoneNo IPR availableCDDcd12399RRM_HP0827_likecoord: 252..328
e-value: 1.36743E-32
score: 114.248
NoneNo IPR availableCDDcd12399RRM_HP0827_likecoord: 158..233
e-value: 3.52623E-34
score: 118.485
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 153..246
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 245..333