Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAAACAAGAGGCAAACACTCGAAGACAAAGAGGGGTCAAGCTCGAGCAATAGCGAAGCAGTTCAAAGTCAAGAATCTGTCAATAAGGCAAAAACTTGGCCTCACAGAGAAGCCTGCAAAGGCCTCAAAGGAAGGAATGGGGTTTTTCATTAGAAGAACTCTGCCTCGGAAGTTTGGTATATCATTCACAATTCCAGACCGAATGGCCACAGAGATCAATGACAAGATGAGGATAAGTGGCTTACACCCTCTGAGAATCACCAGAGTCCCATCTGGTGGACCAATGGAGTTTCATGCAGTTGTAAAAGAGGCTGAGAAAGGTTCAGCTCCATTGAAGAATCAGCAGCAAGGCAGGCCACCAAATCCTAAAGTAGCATATCATAGGAGCCGCTTGAATGAGTGGCATCCCCATGTGTTTCATTTCATCTCTGATTATTGTTAA
mRNA sequence
ATGGCCAAAACAAGAGGCAAACACTCGAAGACAAAGAGGGGTCAAGCTCGAGCAATAGCGAAGCAGTTCAAAGTCAAGAATCTGTCAATAAGGCAAAAACTTGGCCTCACAGAGAAGCCTGCAAAGGCCTCAAAGGAAGGAATGGGGTTTTTCATTAGAAGAACTCTGCCTCGGAAGTTTGGTATATCATTCACAATTCCAGACCGAATGGCCACAGAGATCAATGACAAGATGAGGATAAGTGGCTTACACCCTCTGAGAATCACCAGAGTCCCATCTGGTGGACCAATGGAGTTTCATGCAGTTGTAAAAGAGGCTGAGAAAGGTTCAGCTCCATTGAAGAATCAGCAGCAAGGCAGGCCACCAAATCCTAAAGTAGCATATCATAGGAGCCGCTTGAATGAGTGGCATCCCCATGTGTTTCATTTCATCTCTGATTATTGTTAA
Coding sequence (CDS)
ATGGCCAAAACAAGAGGCAAACACTCGAAGACAAAGAGGGGTCAAGCTCGAGCAATAGCGAAGCAGTTCAAAGTCAAGAATCTGTCAATAAGGCAAAAACTTGGCCTCACAGAGAAGCCTGCAAAGGCCTCAAAGGAAGGAATGGGGTTTTTCATTAGAAGAACTCTGCCTCGGAAGTTTGGTATATCATTCACAATTCCAGACCGAATGGCCACAGAGATCAATGACAAGATGAGGATAAGTGGCTTACACCCTCTGAGAATCACCAGAGTCCCATCTGGTGGACCAATGGAGTTTCATGCAGTTGTAAAAGAGGCTGAGAAAGGTTCAGCTCCATTGAAGAATCAGCAGCAAGGCAGGCCACCAAATCCTAAAGTAGCATATCATAGGAGCCGCTTGAATGAGTGGCATCCCCATGTGTTTCATTTCATCTCTGATTATTGTTAA
Protein sequence
MAKTRGKHSKTKRGQARAIAKQFKVKNLSIRQKLGLTEKPAKASKEGMGFFIRRTLPRKFGISFTIPDRMATEINDKMRISGLHPLRITRVPSGGPMEFHAVVKEAEKGSAPLKNQQQGRPPNPKVAYHRSRLNEWHPHVFHFISDYC
Homology
BLAST of Cp4.1LG18g07320 vs. NCBI nr
Match:
KAG6589576.1 (hypothetical protein SDJN03_14999, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 292 bits (748), Expect = 1.25e-99
Identity = 144/148 (97.30%), Postives = 144/148 (97.30%), Query Frame = 0
Query: 1 MAKTRGKHSKTKRGQARAIAKQFKVKNLSIRQKLGLTEKPAKASKEGMGFFIRRTLPRKF 60
MAKTRGKHSKTKRGQARAIAKQFKVKNLSIRQKLGLTEKPAK SKEGMGFFIRRTLPRKF
Sbjct: 1 MAKTRGKHSKTKRGQARAIAKQFKVKNLSIRQKLGLTEKPAKVSKEGMGFFIRRTLPRKF 60
Query: 61 GISFTIPDRMATEINDKMRISGLHPLRITRVPSGGPMEFHAVVKEAEKGSAPLKNQQQGR 120
GISFTIPDRMATEINDK RISGLHPLRITRVPSGGPMEFHAVVKEAEKGSAPLKNQQQGR
Sbjct: 61 GISFTIPDRMATEINDKKRISGLHPLRITRVPSGGPMEFHAVVKEAEKGSAPLKNQQQGR 120
Query: 121 PPNPKVAYHRSRLNEWHPHVFHFISDYC 148
PPNPK AYHRSRLNEWHP VFHFISDYC
Sbjct: 121 PPNPKAAYHRSRLNEWHPQVFHFISDYC 148
BLAST of Cp4.1LG18g07320 vs. NCBI nr
Match:
KGN63749.1 (hypothetical protein Csa_013996 [Cucumis sativus])
HSP 1 Score: 200 bits (508), Expect = 6.13e-63
Identity = 109/150 (72.67%), Postives = 122/150 (81.33%), Query Frame = 0
Query: 1 MAKTRGKHSKTK-RGQARAIAKQFKVKNLSIRQKLGLTEKPAKASKEGMGFFIRRTLPRK 60
MAKTR K+ K K R +AR IAK+F+V+N + RQKL LTEK + SKE M +R K
Sbjct: 1 MAKTRNKNIKAKKRDRARTIAKRFRVENFT-RQKLVLTEKLEETSKERME--VRALHEIK 60
Query: 61 FGISFTIPDRMATEINDKMRISGLHPLRITRVPSGGPMEFHAVVKEAEKGSAPLKNQQQG 120
FGISFTIPDRMATEI+DK RISGLHPLRITRVP GGPMEFH +VKEAEKGSAPLKNQQ+G
Sbjct: 61 FGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKG 120
Query: 121 RPPNPKVAYHRSRLNEWHPHVFHFISD-YC 148
+PPNPK AYHRS LNEWHP VFHFIS+ YC
Sbjct: 121 KPPNPKAAYHRSCLNEWHPQVFHFISNSYC 147
BLAST of Cp4.1LG18g07320 vs. NCBI nr
Match:
TYK28377.1 (hypothetical protein E5676_scaffold629G00030 [Cucumis melo var. makuwa])
HSP 1 Score: 182 bits (463), Expect = 2.50e-56
Identity = 102/148 (68.92%), Postives = 112/148 (75.68%), Query Frame = 0
Query: 1 MAKTRGKHSKTK-RGQARAIAKQFKVKNLSIRQKLGLTEKPAKASKEGMGFFIRRTLPR- 60
MAKTR K++K K R QAR IAKQF+V L EK +ASKE M RTL +
Sbjct: 1 MAKTRNKNTKMKKRDQARTIAKQFRV----------LKEKLEEASKERMEV---RTLHKI 60
Query: 61 KFGISFTIPDRMATEINDKMRISGLHPLRITRVPSGGPMEFHAVVKEAEKGSAPLKNQQQ 120
KFGISFTIPDRMATEINDK ISGL PLRITRVP GGPMEFH +VKEAEKGSAPLKN ++
Sbjct: 61 KFGISFTIPDRMATEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNHKK 120
Query: 121 GRPPNPKVAYHRSRLNEWHPHVFHFISD 146
G+PPNPK AYHRS NEWHP VFHFIS+
Sbjct: 121 GKPPNPKTAYHRSCFNEWHPQVFHFISN 135
BLAST of Cp4.1LG18g07320 vs. NCBI nr
Match:
KAA0058005.1 (hypothetical protein E6C27_scaffold274G003090 [Cucumis melo var. makuwa])
HSP 1 Score: 179 bits (455), Expect = 4.12e-55
Identity = 98/147 (66.67%), Postives = 109/147 (74.15%), Query Frame = 0
Query: 1 MAKTRGKHSKTK-RGQARAIAKQFKVKNLSIRQKLGLTEKPAKASKEGMGFFIRRTLPRK 60
MAKTR K++K K R QAR IAK+F+V L EK +ASKE M +R K
Sbjct: 1 MAKTRNKNTKMKKRDQARTIAKRFRV----------LKEKLEEASKERME--VRTVHQIK 60
Query: 61 FGISFTIPDRMATEINDKMRISGLHPLRITRVPSGGPMEFHAVVKEAEKGSAPLKNQQQG 120
FGISFTIPDRM TEINDK ISGL PLRITRVP GGPMEFH +VKEAEKGSAPLKN ++G
Sbjct: 61 FGISFTIPDRMTTEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNHKKG 120
Query: 121 RPPNPKVAYHRSRLNEWHPHVFHFISD 146
+PPNPK AYHRS NEWHP VFHFIS+
Sbjct: 121 KPPNPKTAYHRSCFNEWHPQVFHFISN 135
BLAST of Cp4.1LG18g07320 vs. NCBI nr
Match:
PON36990.1 (hypothetical protein PanWU01x14_323790 [Parasponia andersonii])
HSP 1 Score: 124 bits (310), Expect = 1.68e-33
Identity = 59/98 (60.20%), Postives = 70/98 (71.43%), Query Frame = 0
Query: 48 MGFFIRRTLPRKFGISFTIPDRMATEINDKMRISGLHPLRITRVPSGGPMEFHAVVKEAE 107
M F R P+KFGISF +PDR+A EI+DK I G HP+RITR+PSGGP EFH VV+EAE
Sbjct: 1 MDFCALRAQPKKFGISFIVPDRLAVEISDKKTIVGNHPMRITRIPSGGPTEFHRVVEEAE 60
Query: 108 KGSAPLKNQQQG---RPPNPKVAYHRSRLNEWHPHVFH 142
K S PLK + PNPK AYHRS +N+WHP VF+
Sbjct: 61 KESRPLKKYNENVMATRPNPKKAYHRSHMNDWHPKVFY 98
BLAST of Cp4.1LG18g07320 vs. ExPASy TrEMBL
Match:
A0A0A0LRV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014460 PE=4 SV=1)
HSP 1 Score: 200 bits (508), Expect = 2.97e-63
Identity = 109/150 (72.67%), Postives = 122/150 (81.33%), Query Frame = 0
Query: 1 MAKTRGKHSKTK-RGQARAIAKQFKVKNLSIRQKLGLTEKPAKASKEGMGFFIRRTLPRK 60
MAKTR K+ K K R +AR IAK+F+V+N + RQKL LTEK + SKE M +R K
Sbjct: 1 MAKTRNKNIKAKKRDRARTIAKRFRVENFT-RQKLVLTEKLEETSKERME--VRALHEIK 60
Query: 61 FGISFTIPDRMATEINDKMRISGLHPLRITRVPSGGPMEFHAVVKEAEKGSAPLKNQQQG 120
FGISFTIPDRMATEI+DK RISGLHPLRITRVP GGPMEFH +VKEAEKGSAPLKNQQ+G
Sbjct: 61 FGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQKG 120
Query: 121 RPPNPKVAYHRSRLNEWHPHVFHFISD-YC 148
+PPNPK AYHRS LNEWHP VFHFIS+ YC
Sbjct: 121 KPPNPKAAYHRSCLNEWHPQVFHFISNSYC 147
BLAST of Cp4.1LG18g07320 vs. ExPASy TrEMBL
Match:
A0A5D3DX07 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00030 PE=4 SV=1)
HSP 1 Score: 182 bits (463), Expect = 1.21e-56
Identity = 102/148 (68.92%), Postives = 112/148 (75.68%), Query Frame = 0
Query: 1 MAKTRGKHSKTK-RGQARAIAKQFKVKNLSIRQKLGLTEKPAKASKEGMGFFIRRTLPR- 60
MAKTR K++K K R QAR IAKQF+V L EK +ASKE M RTL +
Sbjct: 1 MAKTRNKNTKMKKRDQARTIAKQFRV----------LKEKLEEASKERMEV---RTLHKI 60
Query: 61 KFGISFTIPDRMATEINDKMRISGLHPLRITRVPSGGPMEFHAVVKEAEKGSAPLKNQQQ 120
KFGISFTIPDRMATEINDK ISGL PLRITRVP GGPMEFH +VKEAEKGSAPLKN ++
Sbjct: 61 KFGISFTIPDRMATEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNHKK 120
Query: 121 GRPPNPKVAYHRSRLNEWHPHVFHFISD 146
G+PPNPK AYHRS NEWHP VFHFIS+
Sbjct: 121 GKPPNPKTAYHRSCFNEWHPQVFHFISN 135
BLAST of Cp4.1LG18g07320 vs. ExPASy TrEMBL
Match:
A0A5A7UWL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003090 PE=4 SV=1)
HSP 1 Score: 179 bits (455), Expect = 2.00e-55
Identity = 98/147 (66.67%), Postives = 109/147 (74.15%), Query Frame = 0
Query: 1 MAKTRGKHSKTK-RGQARAIAKQFKVKNLSIRQKLGLTEKPAKASKEGMGFFIRRTLPRK 60
MAKTR K++K K R QAR IAK+F+V L EK +ASKE M +R K
Sbjct: 1 MAKTRNKNTKMKKRDQARTIAKRFRV----------LKEKLEEASKERME--VRTVHQIK 60
Query: 61 FGISFTIPDRMATEINDKMRISGLHPLRITRVPSGGPMEFHAVVKEAEKGSAPLKNQQQG 120
FGISFTIPDRM TEINDK ISGL PLRITRVP GGPMEFH +VKEAEKGSAPLKN ++G
Sbjct: 61 FGISFTIPDRMTTEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNHKKG 120
Query: 121 RPPNPKVAYHRSRLNEWHPHVFHFISD 146
+PPNPK AYHRS NEWHP VFHFIS+
Sbjct: 121 KPPNPKTAYHRSCFNEWHPQVFHFISN 135
BLAST of Cp4.1LG18g07320 vs. ExPASy TrEMBL
Match:
A0A2P5AKC8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_323790 PE=4 SV=1)
HSP 1 Score: 124 bits (310), Expect = 8.15e-34
Identity = 59/98 (60.20%), Postives = 70/98 (71.43%), Query Frame = 0
Query: 48 MGFFIRRTLPRKFGISFTIPDRMATEINDKMRISGLHPLRITRVPSGGPMEFHAVVKEAE 107
M F R P+KFGISF +PDR+A EI+DK I G HP+RITR+PSGGP EFH VV+EAE
Sbjct: 1 MDFCALRAQPKKFGISFIVPDRLAVEISDKKTIVGNHPMRITRIPSGGPTEFHRVVEEAE 60
Query: 108 KGSAPLKNQQQG---RPPNPKVAYHRSRLNEWHPHVFH 142
K S PLK + PNPK AYHRS +N+WHP VF+
Sbjct: 61 KESRPLKKYNENVMATRPNPKKAYHRSHMNDWHPKVFY 98
BLAST of Cp4.1LG18g07320 vs. ExPASy TrEMBL
Match:
A0A2P5F4J0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_115550 PE=4 SV=1)
HSP 1 Score: 122 bits (305), Expect = 4.67e-33
Identity = 58/98 (59.18%), Postives = 69/98 (70.41%), Query Frame = 0
Query: 48 MGFFIRRTLPRKFGISFTIPDRMATEINDKMRISGLHPLRITRVPSGGPMEFHAVVKEAE 107
M F R P+KFGISF +PDR+A EI+DK I G HP+RITR+P GGP EFH VV+EAE
Sbjct: 1 MDFCALRAQPKKFGISFIVPDRLAVEISDKKTIVGKHPMRITRIPLGGPTEFHRVVEEAE 60
Query: 108 KGSAPLKNQQQG---RPPNPKVAYHRSRLNEWHPHVFH 142
K S PLK + PNPK AYHRS +N+WHP VF+
Sbjct: 61 KESRPLKKYHENVMATGPNPKKAYHRSHMNDWHPKVFY 98
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG6589576.1 | 1.25e-99 | 97.30 | hypothetical protein SDJN03_14999, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KGN63749.1 | 6.13e-63 | 72.67 | hypothetical protein Csa_013996 [Cucumis sativus] | [more] |
| TYK28377.1 | 2.50e-56 | 68.92 | hypothetical protein E5676_scaffold629G00030 [Cucumis melo var. makuwa] | [more] |
| KAA0058005.1 | 4.12e-55 | 66.67 | hypothetical protein E6C27_scaffold274G003090 [Cucumis melo var. makuwa] | [more] |
| PON36990.1 | 1.68e-33 | 60.20 | hypothetical protein PanWU01x14_323790 [Parasponia andersonii] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LRV9 | 2.97e-63 | 72.67 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014460 PE=4 SV=1 | [more] |
| A0A5D3DX07 | 1.21e-56 | 68.92 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7UWL1 | 2.00e-55 | 66.67 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A2P5AKC8 | 8.15e-34 | 60.20 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_323790 PE... | [more] |
| A0A2P5F4J0 | 4.67e-33 | 59.18 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_115550 PE=4 SV... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
