Cp4.1LG17g00130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
ACTAATATATATATATATGTGCTACACAACAACATAGGTTCACGAGACTAATGAACTCTGATGTACCTTTTTCTCTTTCTTTTCTCTCCCTTCCACTAACCAAAACCAACATGGACCATTGGCTTTACTTCCCATTCTGTTTTAACCCATCTTCTGCTATTTCACCTTTCTTCACACCATGCATTTCTACATAAATATTTCTTTGTCCTCTAAACCCCTCCACTTTTTTACTTTTTACTATAATATCCTGCTCATCTCTCTCTCTCTCAACTCGACACCTGTTCTCTTTCTACACGTTACTTCTTTCCTTTCTCTTATAAAGTATTAACAAATGTAGATACATATGCATATATAGCTGCTTCTGTCCACCCAGCTTCCCCACTTCATTCTAACCTTTGTTCTTTACAACTCAAGTCTCTTTCTCTCCATTCCTTTCCCATTCTTTCCTCCTGCCATCCCTCTCCATTTTTGCCACTTGTTGCTCACTGCTAACTTTCTGGCCTTGCATTCTTTTCAAATTCACCTGGCTTCCATGGAGTTCAATCGAGTTCCTGCTGTAATGCTTTGGTTCACCGCCATTTTGGTGGCGGACAACTTGAGCAATGTGCAAGGAAGATACCATTTTCACAAGGGACAAAAGAAACAGAACCCTGATGAACAGCCCTCTCTTCCATCCCCTGTTTATTCACCACCACCGCAAGACTCGGTTCCTTCAACTCCAGCTCACCCAGCTCCCTCAGTGCCATCTGATCCCTACCCTGATGATCCAGGAAACACCACTTCTGACTGTGTTTTTGACGTCACTAATTATGGGGCGGTTGGAGATGGTTGTGCTGATGACACTGCTGCCTTCAGGGCAGCATGGAAAGCAGCCTGTGCTGTTGAATCTGCCACTCTTTTAGTTCCCTCTGATCGTTGCTTTAAAATCACTTCAACTATCTTCTCAGGACCTTGCAAACCAGGACTTGTGTTTAAGGTGGATGGAACCCTGATGCCACCGGACGGACCAGAGTCGTGGCCGAAGGCGGACAGTTTGAGGCAATGGCTCGTGTTTTACAGGCTGGATCAAATGACATTGACTGGAACTGGAACCATCGAAGGGAATGGCCAAAAATGGTGGGAGTTGCCATGCAAACCACATAGGGGTCCAAATGGGTCGACTCTGCCAGGACCATGTGACAGCCCTGCGTTAATAAGGTTCTTCATGAGCAGTAATTTGGCAGTGAGTGGGCTGAGAATTCAGAACAGTCCACAGTTCCATATGAAATTCGATGGGTGTGAAGGAGTTCTGATAGACAAGCTGTCAATATCTTCCCCAAAGCTCAGTCCCAACACTGACGGAATCCATATAGAGAATACCAAAGGAGTAGGAATATACAACTCCATGATAGGCAATGTCCACAATTCACAGGCATGCGTTTCCAACATAACAGTGAGAAATGCAGTGATTAGGGAATCAGACAATGGAGTGAGGATAAAGACATGGCAAGGAGGGTCGGGTACAGTGAGCGACATCTTATTCGAGAACATACAGATGGAGAATGTTAGAAACTGCATCATAGTTGACCAGTACTACTGCTTGTCCAAGGATTGTCGTAACCAGACATCGGCTGTGTTTGTGAACCAAGTCTTGTACAAGAACATCAAGGGAACTTACGACGTTAGGAACACTCCAATTCACTTCGCGTGCAGCGACACAGTGGCCTGCACGAATATTACAATGTCTGAAGTAGAATTGCTACCACATGAGGGTGAATTGGTGGAAGATCCTTTCTGTTGGAATGCATTTGGGATTCAGGAGACTTTGACCATTCCTCCCATTGATTGCTTGCAAGAAGGAGCACCTCAGAATGTCGCAGAGACCTATGAATATAGCTGC20040060080010001200140016001800Expect = 980.0 / Score = 7.3Expect = 11.0 / Score = 15.0Expect = 390.0 / Score = 9.8Expect = 9.8E-28 / Score = 97.1Expect = 9.0E-31 / Score = 107.1Expect = 3.8E-93 / Score = 314.7Score = Score = Score = Score = Score = Score = Score = SequenceSM00710PF00295G3DSA:2.160.20.10mobidb-litemobidb-litePTHR31375PTHR31375:SF142SSF51126
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 296..317
e-value: 11.0
score: 15.0
coord: 249..275
e-value: 980.0
score: 7.3
coord: 325..346
e-value: 390.0
score: 9.8
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 119..288
e-value: 9.8E-28
score: 97.1
coord: 292..402
e-value: 9.0E-31
score: 107.1
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 80..446
e-value: 3.8E-93
score: 314.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..83
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 8..288
coord: 289..440
NoneNo IPR availablePANTHERPTHR31375:SF142POLYGALACTURONASE PLANT-LIKE PROTEINcoord: 8..288
coord: 289..440
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 86..442