Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTGTGGATGATATGCTTAGTTTTGATTAGCATGGTGGTGATGGCCCGAGCAGATGAAGAGGAGAGTAAACCCATTGAGTTTTTGAATTGCAATCAACCAAAGCCTCCTCCGGCTTGCCTTCAAATAATACATAGGAGATTTCCCCGCCCTCCCTTACAGGGTGACCGTGGTTGCAACGCAATTACCCGTTGTCGTGGAGGAATTGGATCAGGTAGACCACCACCGCACATTTGA
mRNA sequence
ATGAAGTTGTGGATGATATGCTTAGTTTTGATTAGCATGGTGGTGATGGCCCGAGCAGATGAAGAGGAGAGTAAACCCATTGAGTTTTTGAATTGCAATCAACCAAAGCCTCCTCCGGCTTGCCTTCAAATAATACATAGGAGATTTCCCCGCCCTCCCTTACAGGGTGACCGTGGTTGCAACGCAATTACCCGTTGTCGTGGAGGAATTGGATCAGGTAGACCACCACCGCACATTTGA
Coding sequence (CDS)
ATGAAGTTGTGGATGATATGCTTAGTTTTGATTAGCATGGTGGTGATGGCCCGAGCAGATGAAGAGGAGAGTAAACCCATTGAGTTTTTGAATTGCAATCAACCAAAGCCTCCTCCGGCTTGCCTTCAAATAATACATAGGAGATTTCCCCGCCCTCCCTTACAGGGTGACCGTGGTTGCAACGCAATTACCCGTTGTCGTGGAGGAATTGGATCAGGTAGACCACCACCGCACATTTGA
Protein sequence
MKLWMICLVLISMVVMARADEEESKPIEFLNCNQPKPPPACLQIIHRRFPRPPLQGDRGCNAITRCRGGIGSGRPPPHI
Homology
BLAST of Cp4.1LG15g01590 vs. NCBI nr
Match:
XP_038877580.1 (protein RALF-like 11 [Benincasa hispida])
HSP 1 Score: 63.9 bits (154), Expect = 2.21e-11
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0
Query: 1 MKLWMICLVLISMVVMARADEEESKPIEFLN-CNQPKPPPACLQIIHRRFPRPPLQGDRG 60
MK W+IC+V ISM+V+ E K ++FL+ CNQP PPP C ++ + P +RG
Sbjct: 1 MKSWLICVVFISMLVVGPGVAAEKKYLQFLDPCNQPNPPPTCSEVKEQVEANP---YNRG 60
Query: 61 CNAITRCRGG 69
C+AI RCRGG
Sbjct: 61 CSAIHRCRGG 67
BLAST of Cp4.1LG15g01590 vs. NCBI nr
Match:
KAE8637268.1 (hypothetical protein CSA_017684 [Cucumis sativus])
HSP 1 Score: 60.8 bits (146), Expect = 3.73e-10
Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 0
Query: 1 MKLWMICLVLISMVVMARADEEESKPIEFLN-CNQPKPPPACLQIIHRRFPRPPLQGDRG 60
MK W+IC+V ISM+VM++ ++ ++F N C+ P PPP+C + P P DRG
Sbjct: 1 MKSWLICVVFISMLVMSQEVGAQTNHLKFPNPCDLPSPPPSCSSKVKDHAPTNPY--DRG 60
Query: 61 CNAITRCRG 68
C+AI RCRG
Sbjct: 61 CSAIHRCRG 67
BLAST of Cp4.1LG15g01590 vs. NCBI nr
Match:
KGN58523.2 (hypothetical protein Csa_001790 [Cucumis sativus])
HSP 1 Score: 60.8 bits (146), Expect = 4.22e-10
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 0
Query: 1 MKLWMICLVLISMVVMARADEEESKPIEFLNCNQPKPPPACLQIIHRRFPRPPLQGDRGC 60
M+ WMIC+V ISMVVM + E + K ++F++CNQPKPPP C + + +RGC
Sbjct: 1 MRSWMICVVFISMVVMFQNVEADRKYLKFVDCNQPKPPPFCGLLKSTQLV------ERGC 60
Query: 61 NAITR-CRG-GIGSGRPPP 77
+A+ CRG G + RP P
Sbjct: 61 SALPSICRGSGSAARRPNP 73
BLAST of Cp4.1LG15g01590 vs. NCBI nr
Match:
XP_022947821.1 (protein RALF-like 10 [Cucurbita moschata])
HSP 1 Score: 58.9 bits (141), Expect = 2.04e-09
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0
Query: 1 MKLWMICLVLISMVVMARADEEESKPIEFLN-CNQPKPPPACLQIIHRRFPRPPLQGDRG 60
M+ W+ICLVLI M+V+++ E+K ++F + C QP PPP C I P P + RG
Sbjct: 1 MRSWLICLVLIGMLVVSQDVASETKFLKFPDPCQQPNPPPGCS--IGNAVPANPYR--RG 60
Query: 61 CNAITRCRGG 69
C+ ITRCRGG
Sbjct: 61 CSKITRCRGG 66
BLAST of Cp4.1LG15g01590 vs. NCBI nr
Match:
XP_016900883.1 (PREDICTED: protein RALF-like 30 [Cucumis melo])
HSP 1 Score: 58.5 bits (140), Expect = 2.97e-09
Identity = 32/70 (45.71%), Postives = 44/70 (62.86%), Query Frame = 0
Query: 1 MKLWMICLVLISMVVMARADEEESKPIEFLN-CNQPKPPPACLQIIHRRFPRPPLQGDRG 60
MK W+IC L+SM+VM ++K ++FL+ C QP PP +C + H R P + DRG
Sbjct: 1 MKSWLICFALLSMLVMGHEVAAKTKFLKFLDPCLQPSPPRSCYK--HERVDSP-IAYDRG 60
Query: 61 CNAITRCRGG 69
C+ I RCRGG
Sbjct: 61 CSPILRCRGG 67
BLAST of Cp4.1LG15g01590 vs. ExPASy TrEMBL
Match:
A0A0A0M0X3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690160 PE=3 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 1.81e-10
Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 0
Query: 1 MKLWMICLVLISMVVMARADEEESKPIEFLN-CNQPKPPPACLQIIHRRFPRPPLQGDRG 60
MK W+IC+V ISM+VM++ ++ ++F N C+ P PPP+C + P P DRG
Sbjct: 1 MKSWLICVVFISMLVMSQEVGAQTNHLKFPNPCDLPSPPPSCSSKVKDHAPTNPY--DRG 60
Query: 61 CNAITRCRG 68
C+AI RCRG
Sbjct: 61 CSAIHRCRG 67
BLAST of Cp4.1LG15g01590 vs. ExPASy TrEMBL
Match:
A0A6J1G7J2 (protein RALF-like 10 OS=Cucurbita moschata OX=3662 GN=LOC111451581 PE=3 SV=1)
HSP 1 Score: 58.9 bits (141), Expect = 9.89e-10
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0
Query: 1 MKLWMICLVLISMVVMARADEEESKPIEFLN-CNQPKPPPACLQIIHRRFPRPPLQGDRG 60
M+ W+ICLVLI M+V+++ E+K ++F + C QP PPP C I P P + RG
Sbjct: 1 MRSWLICLVLIGMLVVSQDVASETKFLKFPDPCQQPNPPPGCS--IGNAVPANPYR--RG 60
Query: 61 CNAITRCRGG 69
C+ ITRCRGG
Sbjct: 61 CSKITRCRGG 66
BLAST of Cp4.1LG15g01590 vs. ExPASy TrEMBL
Match:
A0A1S4DY33 (protein RALF-like 30 OS=Cucumis melo OX=3656 GN=LOC107991083 PE=3 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 1.44e-09
Identity = 32/70 (45.71%), Postives = 44/70 (62.86%), Query Frame = 0
Query: 1 MKLWMICLVLISMVVMARADEEESKPIEFLN-CNQPKPPPACLQIIHRRFPRPPLQGDRG 60
MK W+IC L+SM+VM ++K ++FL+ C QP PP +C + H R P + DRG
Sbjct: 1 MKSWLICFALLSMLVMGHEVAAKTKFLKFLDPCLQPSPPRSCYK--HERVDSP-IAYDRG 60
Query: 61 CNAITRCRGG 69
C+ I RCRGG
Sbjct: 61 CSPILRCRGG 67
BLAST of Cp4.1LG15g01590 vs. ExPASy TrEMBL
Match:
A0A0A0LI94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G191310 PE=3 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 2.96e-09
Identity = 31/70 (44.29%), Postives = 42/70 (60.00%), Query Frame = 0
Query: 1 MKLWMICLVLISMVVMARADEEESKPIEFLN-CNQPKPPPACLQIIHRRFPRPPLQGDRG 60
MK W+ICL LI M+V+ + E+K ++F++ CNQP PPP C P +R
Sbjct: 1 MKSWLICLALIGMLVVGQEVAAETKHLKFIDPCNQPSPPPTCPNRDKVEEANP---YNRD 60
Query: 61 CNAITRCRGG 69
C+AI RCRGG
Sbjct: 61 CSAINRCRGG 67
BLAST of Cp4.1LG15g01590 vs. ExPASy TrEMBL
Match:
A0A0A0LZK3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G610770 PE=3 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 5.13e-08
Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0
Query: 1 MKLWMICLVLISMVVMARADEEESKPIEFLN-CNQPKPPPACLQIIHRRFPRPPLQGDRG 60
MK W+IC L+SM+VM+ E K + F + C QP PP +C + P P DRG
Sbjct: 34 MKSWLICFALLSMLVMSHEVAAEGKFLNFSDLCLQPSPPKSCYKDERADSPIP---YDRG 93
Query: 61 CNAITRCRGG 69
C+ I RCRGG
Sbjct: 94 CSPILRCRGG 100
BLAST of Cp4.1LG15g01590 vs. TAIR 10
Match:
AT2G19030.1 (ralf-like 11 )
HSP 1 Score: 43.1 bits (100), Expect = 1.2e-04
Identity = 27/71 (38.03%), Postives = 37/71 (52.11%), Query Frame = 0
Query: 1 MKLWMICLVLISMVVMARADEEESKPIEF---LNCNQPKPPPACLQI-IHRRFPRPPLQG 60
MK W+ICL++I V+A E + IE+ C P PPP C ++ P P +
Sbjct: 1 MKAWLICLLVICAAVIAEPVESRNY-IEYGAINKCAGPNPPPGCNPPGAEQKNPTPVNEY 60
Query: 61 DRGCNAITRCR 68
RGC+ I RCR
Sbjct: 61 SRGCSKIHRCR 70
BLAST of Cp4.1LG15g01590 vs. TAIR 10
Match:
AT2G19045.1 (RALF-like 13 )
HSP 1 Score: 43.1 bits (100), Expect = 1.2e-04
Identity = 27/71 (38.03%), Postives = 37/71 (52.11%), Query Frame = 0
Query: 1 MKLWMICLVLISMVVMARADEEESKPIEF---LNCNQPKPPPACLQI-IHRRFPRPPLQG 60
MK W+ICL++I V+A E + IE+ C P PPP C ++ P P +
Sbjct: 1 MKAWVICLLVICAAVIAEPVESRNY-IEYGAINKCAGPNPPPGCNPPGAEQKNPNPVNEY 60
Query: 61 DRGCNAITRCR 68
RGC+ I RCR
Sbjct: 61 SRGCSKIHRCR 70
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0M0X3 | 1.81e-10 | 44.93 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690160 PE=3 SV=1 | [more] |
A0A6J1G7J2 | 9.89e-10 | 47.14 | protein RALF-like 10 OS=Cucurbita moschata OX=3662 GN=LOC111451581 PE=3 SV=1 | [more] |
A0A1S4DY33 | 1.44e-09 | 45.71 | protein RALF-like 30 OS=Cucumis melo OX=3656 GN=LOC107991083 PE=3 SV=1 | [more] |
A0A0A0LI94 | 2.96e-09 | 44.29 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G191310 PE=3 SV=1 | [more] |
A0A0A0LZK3 | 5.13e-08 | 44.29 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G610770 PE=3 SV=1 | [more] |