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Cp4.1LG14g10390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATGAACACCAAACGCGACAAACAAAATTTATGCAGCACCGAACCCCCCACAGCCTCAAAATCTCCGAAAGGAAAATAAGAAATGTTAGAACATCGAAGTTAAAAAAAAGTAAAAAAACAACGGAGGAAATTGGTGACGGTGGAGCCACTTGATCGGCGGTGGATTTGTGGAGGAGGAGGAGCGAGAAGATGGCATTGGTATGGCGATCTCGAATCCTGTTTGATTTGGGGGTAAAGCCATTTTAGATGAATCTGGAATAGGCATTGCAAATTGTTAGGGTTTGTTGTGGCCCAATTAATTACCCTGAACTACACGCTGAAGCAAGCCATCCCCAACCCTCCTTTTTCTTCTTGTTTTCCCTTTTCTTCTCGGATCGTTTTCAATGCAATCTCTCCATTTATTATCCCTAAACCCTTTAATTTGGAGCGCGAATATAACTCTTCGAAGCAGAGAGAGCTTTAAATGCGAGTTGGTTGCTGCGGTTGCTTTCCATCTCCTCCTTCTTCTTAAGCGCTAAGTTTTCGAAATCCCTAATCTTATATCGTTAAAACCCATTTTCGCTTCTCGATTTTGGATCGACCCTTTTGATTTCCATGGATTTCATCGCGAATCCATTTCGATTTTCTTCATCTTCGTCGCCTTCGTTTGGTAATCTCTTTGAGAGAGTTCGAGACATTTGTTGCTATGCGGTTTCTGCGATTCTTGGCAACGTCTTGTCCGCGATCTTCACTTTTTTCTTCGCCCTAGGTTTGTTTCTGATTCATCTTCTGCATTTCTTCGCATCATTTCTCTGTGTTTATGTGATGATAATCATCTGATCAAGGAGAAGAAGAAGAAGAACAGAAAAACAGGGTTTCTGAAATTGTTCTTTGTTGTTTCTGGCAGTGGGGACTTTGCTTGGGGCCATGACTGGCGCATTGATTGGCCAAGAAACAGAGAGTGGGTTCGTTAGAGGAGCGGCTGTTGGGGCAATTTCTGGAGCTGTTTTCTCCATTGAAGTCTTTGAATCTTCTCTGGTTCTTTGGCAATCAGATGAATCAGGAATAGGCTGTCTTCTTTATCTTGTGAGCAAACTTTGTATCCAAATCTTTTGAGAGTTGAAAAATGGCTTCTCTGGTAATCCAACATTAATTTTGTTTGTTATTCTGTATAGATTGATGTCATTGCAAGCCTCCTAAGCGGACGACTCGTTCGAGAACGGATCGGTCCAGCCATATTGAGTGCAGTTCAAAGTCAGGTAGCTTTGCAATGCCATTGATGAATTGTATAGTTGTAGCTTGATTTAGAATGATGAAACTCATGTTCTGGTTTTGGTGTGAATCAGATGGGTGCTACAGAGACGAGCTTTGACGACATCCCAAACATCTTTGATACGAGTAGCGCAAAAGGATTGCCCGGGGACTCGGTCGAGAAAATTCCCAAGATCTTAGTATCTAAGAACAACAGTGTAGATGCTTACGGCGAGCGAGTCTGTTGTTCTGTTTGCCTTCAGGTTAGTCTCTAACTTTTGAATCTTCATACCAATTCGTCGTCGAAATAGCTACTTAATCGTATTTTCGGGTCGTATTTTCCCAGGACTTTCAACTAGGAGAGACTGTAAGAAGTTTACCATATTGCCATCACATGTTCCATTTGCCCTGCATTGATAAATGGCTTCTTACTCATGGCTCTTGCCCTTTATGTAGAAGGGATCTGTAATATTTTTCCACTACTACTACTGTCTTAACTTGCCCTTGTAAATTACAAAATCCACGAAAATTTTCCTTATTTTTCGCTAAAACTCGAGTTGGATCATTGCTTCAGTTGTTCGAACAGGGGCATTCGTAACATACTGAGGCAATCGATCGTCACCGATGTATAAAATTTTTGAGTAATTATAGCTTTATATTGCTCTTGTGAATAATCCATATTCCTCTTCTACTGATTCATCA TATGAACACCAAACGCGACAAACAAAATTTATGCAGCACCGAACCCCCCACAGCCTCAAAATCTCCGAAAGGAAAATAAGAAATGTTAGAACATCGAAGTTAAAAAAAAGTAAAAAAACAACGGAGGAAATTGGTGACGGTGGAGCCACTTGATCGGCGGTGGATTTGTGGAGGAGGAGGAGCGAGAAGATGGCATTGGTATGGCGATCTCGAATCCTGTTTGATTTGGGGGTAAAGCCATTTTAGATGAATCTGGAATAGGCATTGCAAATTGTTAGGGTTTGTTGTGGCCCAATTAATTACCCTGAACTACACGCTGAAGCAAGCCATCCCCAACCCTCCTTTTTCTTCTTGTTTTCCCTTTTCTTCTCGGATCGTTTTCAATGCAATCTCTCCATTTATTATCCCTAAACCCTTTAATTTGGAGCGCGAATATAACTCTTCGAAGCAGAGAGAGCTTTAAATGCGAGTTGGTTGCTGCGGTTGCTTTCCATCTCCTCCTTCTTCTTAAGCGCTAAGTTTTCGAAATCCCTAATCTTATATCGTTAAAACCCATTTTCGCTTCTCGATTTTGGATCGACCCTTTTGATTTCCATGGATTTCATCGCGAATCCATTTCGATTTTCTTCATCTTCGTCGCCTTCGTTTGGTAATCTCTTTGAGAGAGTTCGAGACATTTGTTGCTATGCGGTTTCTGCGATTCTTGGCAACGTCTTGTCCGCGATCTTCACTTTTTTCTTCGCCCTAGTGGGGACTTTGCTTGGGGCCATGACTGGCGCATTGATTGGCCAAGAAACAGAGAGTGGGTTCGTTAGAGGAGCGGCTGTTGGGGCAATTTCTGGAGCTGTTTTCTCCATTGAAGTCTTTGAATCTTCTCTGGTTCTTTGGCAATCAGATGAATCAGGAATAGGCTGTCTTCTTTATCTTATTGATGTCATTGCAAGCCTCCTAAGCGGACGACTCGTTCGAGAACGGATCGGTCCAGCCATATTGAGTGCAGTTCAAAGTCAGATGGGTGCTACAGAGACGAGCTTTGACGACATCCCAAACATCTTTGATACGAGTAGCGCAAAAGGATTGCCCGGGGACTCGGTCGAGAAAATTCCCAAGATCTTAGTATCTAAGAACAACAGTGTAGATGCTTACGGCGAGCGAGTCTGTTGTTCTGTTTGCCTTCAGGACTTTCAACTAGGAGAGACTGTAAGAAGTTTACCATATTGCCATCACATGTTCCATTTGCCCTGCATTGATAAATGGCTTCTTACTCATGGCTCTTGCCCTTTATGTAGAAGGGATCTGTAATATTTTTCCACTACTACTACTGTCTTAACTTGCCCTTGTAAATTACAAAATCCACGAAAATTTTCCTTATTTTTCGCTAAAACTCGAGTTGGATCATTGCTTCAGTTGTTCGAACAGGGGCATTCGTAACATACTGAGGCAATCGATCGTCACCGATGTATAAAATTTTTGAGTAATTATAGCTTTATATTGCTCTTGTGAATAATCCATATTCCTCTTCTACTGATTCATCA ATGGATTTCATCGCGAATCCATTTCGATTTTCTTCATCTTCGTCGCCTTCGTTTGGTAATCTCTTTGAGAGAGTTCGAGACATTTGTTGCTATGCGGTTTCTGCGATTCTTGGCAACGTCTTGTCCGCGATCTTCACTTTTTTCTTCGCCCTAGTGGGGACTTTGCTTGGGGCCATGACTGGCGCATTGATTGGCCAAGAAACAGAGAGTGGGTTCGTTAGAGGAGCGGCTGTTGGGGCAATTTCTGGAGCTGTTTTCTCCATTGAAGTCTTTGAATCTTCTCTGGTTCTTTGGCAATCAGATGAATCAGGAATAGGCTGTCTTCTTTATCTTATTGATGTCATTGCAAGCCTCCTAAGCGGACGACTCGTTCGAGAACGGATCGGTCCAGCCATATTGAGTGCAGTTCAAAGTCAGATGGGTGCTACAGAGACGAGCTTTGACGACATCCCAAACATCTTTGATACGAGTAGCGCAAAAGGATTGCCCGGGGACTCGGTCGAGAAAATTCCCAAGATCTTAGTATCTAAGAACAACAGTGTAGATGCTTACGGCGAGCGAGTCTGTTGTTCTGTTTGCCTTCAGGACTTTCAACTAGGAGAGACTGTAAGAAGTTTACCATATTGCCATCACATGTTCCATTTGCCCTGCATTGATAAATGGCTTCTTACTCATGGCTCTTGCCCTTTATGTAGAAGGGATCTGTAA MDFIANPFRFSSSSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNSVDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL Homology
BLAST of Cp4.1LG14g10390 vs. ExPASy Swiss-Prot
Match: Q8GT74 (NEP1-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=NIP2 PE=1 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 1.1e-95 Identity = 173/236 (73.31%), Postives = 199/236 (84.32%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. ExPASy Swiss-Prot
Match: Q8GT75 (NEP1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=NIP1 PE=1 SV=2) HSP 1 Score: 343.2 bits (879), Expect = 2.3e-93 Identity = 165/223 (73.99%), Postives = 194/223 (87.00%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. ExPASy Swiss-Prot
Match: Q9FKX5 (NEP1-interacting protein-like 1 OS=Arabidopsis thaliana OX=3702 GN=ATL27 PE=2 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 1.9e-87 Identity = 163/216 (75.46%), Postives = 186/216 (86.11%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. ExPASy Swiss-Prot
Match: Q8LBA0 (NEP1-interacting protein-like 2 OS=Arabidopsis thaliana OX=3702 GN=ATL24 PE=1 SV=2) HSP 1 Score: 160.6 bits (405), Expect = 2.1e-38 Identity = 80/211 (37.91%), Postives = 127/211 (60.19%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2) HSP 1 Score: 80.5 bits (197), Expect = 2.8e-14 Identity = 39/100 (39.00%), Postives = 53/100 (53.00%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. NCBI nr
Match: XP_022923585.1 (NEP1-interacting protein 2 [Cucurbita moschata] >XP_022965302.1 NEP1-interacting protein 2-like [Cucurbita maxima] >XP_023551841.1 NEP1-interacting protein 2-like [Cucurbita pepo subsp. pepo] >KAG6577795.1 NEP1-interacting protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 468 bits (1203), Expect = 3.94e-166 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. NCBI nr
Match: XP_004146160.1 (NEP1-interacting protein 2 [Cucumis sativus] >XP_008448516.1 PREDICTED: NEP1-interacting protein 2-like [Cucumis melo] >KAA0052939.1 NEP1-interacting protein 1 [Cucumis melo var. makuwa] >KGN55636.1 hypothetical protein Csa_010999 [Cucumis sativus] >TYK11396.1 NEP1-interacting protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 464 bits (1195), Expect = 6.54e-165 Identity = 232/235 (98.72%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. NCBI nr
Match: XP_038903408.1 (NEP1-interacting protein 2-like [Benincasa hispida]) HSP 1 Score: 463 bits (1192), Expect = 1.87e-164 Identity = 231/235 (98.30%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. NCBI nr
Match: XP_022145455.1 (NEP1-interacting protein 2-like [Momordica charantia]) HSP 1 Score: 462 bits (1190), Expect = 3.78e-164 Identity = 231/235 (98.30%), Postives = 234/235 (99.57%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. NCBI nr
Match: KAG6596259.1 (NEP1-interacting protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027807.1 NEP1-interacting protein 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 447 bits (1150), Expect = 4.75e-158 Identity = 222/235 (94.47%), Postives = 229/235 (97.45%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. ExPASy TrEMBL
Match: A0A6J1HJZ0 (NEP1-interacting protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465207 PE=4 SV=1) HSP 1 Score: 468 bits (1203), Expect = 1.91e-166 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. ExPASy TrEMBL
Match: A0A6J1EC93 (NEP1-interacting protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111431224 PE=4 SV=1) HSP 1 Score: 468 bits (1203), Expect = 1.91e-166 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. ExPASy TrEMBL
Match: A0A5A7UHC4 (NEP1-interacting protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00490 PE=4 SV=1) HSP 1 Score: 464 bits (1195), Expect = 3.17e-165 Identity = 232/235 (98.72%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. ExPASy TrEMBL
Match: A0A0A0L659 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002560 PE=4 SV=1) HSP 1 Score: 464 bits (1195), Expect = 3.17e-165 Identity = 232/235 (98.72%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. ExPASy TrEMBL
Match: A0A1S3BJV1 (NEP1-interacting protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490668 PE=4 SV=1) HSP 1 Score: 464 bits (1195), Expect = 3.17e-165 Identity = 232/235 (98.72%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. TAIR 10
Match: AT2G17730.1 (NEP-interacting protein 2 ) HSP 1 Score: 350.9 bits (899), Expect = 7.9e-97 Identity = 173/236 (73.31%), Postives = 199/236 (84.32%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. TAIR 10
Match: AT4G35840.1 (RING/U-box superfamily protein ) HSP 1 Score: 343.2 bits (879), Expect = 1.7e-94 Identity = 165/223 (73.99%), Postives = 194/223 (87.00%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. TAIR 10
Match: AT2G17730.2 (NEP-interacting protein 2 ) HSP 1 Score: 328.9 bits (842), Expect = 3.2e-90 Identity = 165/226 (73.01%), Postives = 189/226 (83.63%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. TAIR 10
Match: AT5G66070.1 (RING/U-box superfamily protein ) HSP 1 Score: 323.6 bits (828), Expect = 1.4e-88 Identity = 163/216 (75.46%), Postives = 186/216 (86.11%), Query Frame = 0
BLAST of Cp4.1LG14g10390 vs. TAIR 10
Match: AT5G66070.2 (RING/U-box superfamily protein ) HSP 1 Score: 310.1 bits (793), Expect = 1.6e-84 Identity = 163/240 (67.92%), Postives = 186/240 (77.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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