Cp4.1LG13g03410 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g03410
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	AP2/ERF and B3 domain-containing transcription factor RAV1-like
Location	Cp4.1LG13: 3208495 .. 3209493 (-)
RNA-Seq Expression	Cp4.1LG13g03410
Synteny	Cp4.1LG13g03410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCGAGTTCTATAGACGAAAGCAGCGGCAGCGACTCCACCTCCATTTCTCCCGTCACTCCATTACTCTTCCACTCATCCCCGGCGCCTGGGATGCCCCATGAGGCGGAGTCTCGGAAGCTTCCATCTTCCCGTTTCAAAGGAGTGGTCCCCCAGCCCAATGGCCGATGGGGGGCCCAGATTTACGAGAAGCATCAAAGAGTCTGGCTGGGGACATTCAACCAAGAACACCACGCTGCCAACGCCTACGACATCGCTGCCCTCCGCTTCCGTGGGCGCGATGCCGTCACCAACTTCAAATCCCTGGAGGACGACGATGATAATGATGGTATGGAGGGCGAGTTTCTGAAGTCCCACTCCAAGATGGAGATCGTGGACATGCTCCGGAAACACACGTACAATGAGGAGCTGGAGCAGAGGAAGCGGCAGCGTGGGGCCATAGCGGCGGCTAATACGGCTGTCCACCATTCGGGGTCTGATTCGAAGAGGGAAGTGTTGTTTGAGAAAACGGTGACGCCGAGTGACGTGGGGAAGTTGAACCGGCTGGTGATACCGAAGCAGCACGCGGAGAAGAATTTCCCGATGGGGGAGGGGGTGGGTTCAGGGAAAGGAATGCTTCTGAACTTGGAGGATATGGGAGGGAAAGTTTGGCGGTTCCGGTACTCGTATTGGAATAGTAGCCAGAGCTATGTGTTGACTAGGGGGTGGAGCCGGTTCGTGAAAGAGAAGAGTCTCCGAGCCGGGGATGTGGTTCGGTTCCTCCGCTCCACCGGGGCGGATAAGCAGCTTTACATCGATGGAAAGGCGATAAGTGAAGGGGGGGTGAAGGCGATAAGTGAAGGGGGGGTGAAGGCGGTTCATGTGGTCAAGCTTTTTGGAGTCAATATTCTGGAAGTGCCGCTGCCGGTGGGTCGTTGCGGCGGGGAGCCAAAGAACCAAGGGGTATTATTGGAATTGCAACCTTCCAAGAAGCAGAGAATAATCAAAGCTTTGTAA

mRNA sequence

ATGGATGCGAGTTCTATAGACGAAAGCAGCGGCAGCGACTCCACCTCCATTTCTCCCGTCACTCCATTACTCTTCCACTCATCCCCGGCGCCTGGGATGCCCCATGAGGCGGAGTCTCGGAAGCTTCCATCTTCCCGTTTCAAAGGAGTGGTCCCCCAGCCCAATGGCCGATGGGGGGCCCAGATTTACGAGAAGCATCAAAGAGTCTGGCTGGGGACATTCAACCAAGAACACCACGCTGCCAACGCCTACGACATCGCTGCCCTCCGCTTCCGTGGGCGCGATGCCGTCACCAACTTCAAATCCCTGGAGGACGACGATGATAATGATGGTATGGAGGGCGAGTTTCTGAAGTCCCACTCCAAGATGGAGATCGTGGACATGCTCCGGAAACACACGTACAATGAGGAGCTGGAGCAGAGGAAGCGGCAGCGTGGGGCCATAGCGGCGGCTAATACGGCTGTCCACCATTCGGGGTCTGATTCGAAGAGGGAAGTGTTGTTTGAGAAAACGGTGACGCCGAGTGACGTGGGGAAGTTGAACCGGCTGGTGATACCGAAGCAGCACGCGGAGAAGAATTTCCCGATGGGGGAGGGGGTGGGTTCAGGGAAAGGAATGCTTCTGAACTTGGAGGATATGGGAGGGAAAGTTTGGCGGTTCCGGTACTCGTATTGGAATAGTAGCCAGAGCTATGTGTTGACTAGGGGGTGGAGCCGGTTCGTGAAAGAGAAGAGTCTCCGAGCCGGGGATGTGGTTCGGTTCCTCCGCTCCACCGGGGCGGATAAGCAGCTTTACATCGATGGAAAGGCGATAAGTGAAGGGGGGGTGAAGGCGATAAGTGAAGGGGGGGTGAAGGCGGTTCATGTGGTCAAGCTTTTTGGAGTCAATATTCTGGAAGTGCCGCTGCCGGTGGGTCGTTGCGGCGGGGAGCCAAAGAACCAAGGGGTATTATTGGAATTGCAACCTTCCAAGAAGCAGAGAATAATCAAAGCTTTGTAA

Coding sequence (CDS)

ATGGATGCGAGTTCTATAGACGAAAGCAGCGGCAGCGACTCCACCTCCATTTCTCCCGTCACTCCATTACTCTTCCACTCATCCCCGGCGCCTGGGATGCCCCATGAGGCGGAGTCTCGGAAGCTTCCATCTTCCCGTTTCAAAGGAGTGGTCCCCCAGCCCAATGGCCGATGGGGGGCCCAGATTTACGAGAAGCATCAAAGAGTCTGGCTGGGGACATTCAACCAAGAACACCACGCTGCCAACGCCTACGACATCGCTGCCCTCCGCTTCCGTGGGCGCGATGCCGTCACCAACTTCAAATCCCTGGAGGACGACGATGATAATGATGGTATGGAGGGCGAGTTTCTGAAGTCCCACTCCAAGATGGAGATCGTGGACATGCTCCGGAAACACACGTACAATGAGGAGCTGGAGCAGAGGAAGCGGCAGCGTGGGGCCATAGCGGCGGCTAATACGGCTGTCCACCATTCGGGGTCTGATTCGAAGAGGGAAGTGTTGTTTGAGAAAACGGTGACGCCGAGTGACGTGGGGAAGTTGAACCGGCTGGTGATACCGAAGCAGCACGCGGAGAAGAATTTCCCGATGGGGGAGGGGGTGGGTTCAGGGAAAGGAATGCTTCTGAACTTGGAGGATATGGGAGGGAAAGTTTGGCGGTTCCGGTACTCGTATTGGAATAGTAGCCAGAGCTATGTGTTGACTAGGGGGTGGAGCCGGTTCGTGAAAGAGAAGAGTCTCCGAGCCGGGGATGTGGTTCGGTTCCTCCGCTCCACCGGGGCGGATAAGCAGCTTTACATCGATGGAAAGGCGATAAGTGAAGGGGGGGTGAAGGCGATAAGTGAAGGGGGGGTGAAGGCGGTTCATGTGGTCAAGCTTTTTGGAGTCAATATTCTGGAAGTGCCGCTGCCGGTGGGTCGTTGCGGCGGGGAGCCAAAGAACCAAGGGGTATTATTGGAATTGCAACCTTCCAAGAAGCAGAGAATAATCAAAGCTTTGTAA

Protein sequence

MDASSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSHSKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSGSDSKREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAISEGGVKAVHVVKLFGVNILEVPLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL

Homology

[Close]

BLAST of Cp4.1LG13g03410 vs. ExPASy Swiss-Prot
Match: Q9ZWM9 (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana OX=3702 GN=RAV1 PE=1 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 4.8e-92
Identity = 199/355 (56.06%), Postives = 232/355 (65.35%), Query Frame = 0


Query: 1   MDASSIDESSGS-----DSTSISPVTPLLFHSSPAPGMPH----------EAESRKLPSS 60
           M++SS+DES+ S     ++ +I+P       +    G             EAESRKLPSS
Sbjct: 1   MESSSVDESTTSTGSICETPAITPAKKSSVGNLYRMGSGSSVVLDSENGVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLED 120
           ++KGVVPQPNGRWGAQIYEKHQRVWLGTFN+E  AA AYD+A  RFR RDAVTNFK ++ 
Sbjct: 61  KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDVKM 120

Query: 121 DDDNDGMEGEFLKSHSKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSGSDS--- 180
           D+D    E +FL SHSK EIVDMLRKHTYNEELEQ KR+R         +  SG  +   
Sbjct: 121 DED----EVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGV 180

Query: 181 ------KREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGK 240
                   E LFEK VTPSDVGKLNRLVIPK HAEK+FP+     S KG+LLN ED+ GK
Sbjct: 181 STTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGK 240

Query: 241 VWRFRYSYWNSSQSYVLTRGWSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGV 300
           VWRFRYSYWNSSQSYVLT+GWSRFVKEK+LRAGDVV F RS G D+QLYI        G 
Sbjct: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYI--------GW 300

Query: 301 KAISEGGVKAVHVVKLFGVNILEVPLPVGRCGGEPKNQGVLLELQPSKKQRIIKA 332
           K+ S   + A  V++LFGVNI          G +  N   +L L  SKKQRI  A
Sbjct: 301 KSRSGSDLDAGRVLRLFGVNISPESSRNDVVGNKRVNDTEMLSLVCSKKQRIFHA 343

[Close]

BLAST of Cp4.1LG13g03410 vs. ExPASy Swiss-Prot
Match: P82280 (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana OX=3702 GN=RAV2 PE=1 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 9.0e-91
Identity = 205/364 (56.32%), Postives = 236/364 (64.84%), Query Frame = 0


Query: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPA------------------PGMPHEAESRKL 60
           MD+S IDE S S S S S  T       PA                  P    E ESRKL
Sbjct: 1   MDSSCIDEISSSTSESFSATTAKKLSPPPAAALRLYRMGSGGSSVVLDPENGLETESRKL 60

Query: 61  PSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKS 120
           PSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN++  AA +YDIAA RFRGRDAV NFK+
Sbjct: 61  PSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKN 120

Query: 121 LEDDDDNDGMEGEFLKSHSKMEIVDMLRKHTYNEELEQ-RKRQRGAIAAANTAVHHSGSD 180
           + +D D       FL++HSK EIVDMLRKHTY +ELEQ  KRQ      AN   + S + 
Sbjct: 121 VLEDGDL-----AFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTT 180

Query: 181 SK------REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPM-GEGVGSGKGMLLNLEDMG 240
                   REVLFEK VTPSDVGKLNRLVIPKQHAEK+FP+        KG+L+N ED+ 
Sbjct: 181 QNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVN 240

Query: 241 GKVWRFRYSYWNSSQSYVLTRGWSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEG 300
           GKVWRFRYSYWNSSQSYVLT+GWSRFVKEK+LRAGDVV F RSTG ++QLYID K  S  
Sbjct: 241 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVRS-- 300

Query: 301 GVKAISEGGVKAVHVVKLFGVNILEVPL-----PVGRCGGE-PKNQGVLLELQPSKKQRI 333
                 E  V+   VV+LFGV+I  V        V  CGG+  ++   +  L+ SKKQ I
Sbjct: 301 ---GPRENPVQV--VVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAI 352

[Close]

BLAST of Cp4.1LG13g03410 vs. ExPASy Swiss-Prot
Match: Q9C6M5 (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana OX=3702 GN=TEM1 PE=1 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 9.0e-91
Identity = 193/317 (60.88%), Postives = 217/317 (68.45%), Query Frame = 0


Query: 36  EAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRD 95
           E ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN+E  AA++YDIA  RFRGRD
Sbjct: 61  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRD 120

Query: 96  AVTNFKSLEDDDDNDGMEGEFLKSHSKMEIVDMLRKHTYNEELEQRKRQ----RGAIAAA 155
           AVTNFKS  D +D    E  FL +HSK EIVDMLRKHTY +E EQ +R+     G  +  
Sbjct: 121 AVTNFKSQVDGND---AESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGDGKRSGL 180

Query: 156 NTAVHHSGSDS---KREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFP-------MGEGVG 215
            TA +  G+D+    REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FP       MG    
Sbjct: 181 ETATY--GNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPS 240

Query: 216 SGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWSRFVKEKSLRAGDVVRFLRSTGAD 275
             KG+L+NLED  GKVWRFRYSYWNSSQSYVLT+GWSRFVKEK+LRAGDVV F RSTG D
Sbjct: 241 PTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPD 300

Query: 276 KQLYIDGKAISEGGVKAISEGGVKAVHVVKLFGVNILEV------PLPVGRCGGEPKNQG 333
           +QLYI  K  S                VV+LFGVNI  V       + V   G +   + 
Sbjct: 301 RQLYIHWKVRSS-----------PVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSRED 360

[Close]

BLAST of Cp4.1LG13g03410 vs. ExPASy Swiss-Prot
Match: Q9LS06 (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana OX=3702 GN=ARF14 PE=2 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 4.3e-85
Identity = 193/351 (54.99%), Postives = 228/351 (64.96%), Query Frame = 0


Query: 1   MDA-SSIDESSGSDST-----SISPV---------TPLLFHSSPAPGMPHEAESRKLPSS 60
           MDA SS+DESS +  +     S SP          T ++  S     +  EAESRKLPSS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLED 120
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFN+E  AA AYD+AA RFRGRDAVTNFK    
Sbjct: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTF 120

Query: 121 DDDNDGMEGEFLKSHSKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSG-----S 180
           ++     E EFL +HSK EIVDMLRKHTY EEL+QRKR R       TA   +       
Sbjct: 121 EE-----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTG 180

Query: 181 DSKREVLFEKTVTPSDVGKLNRLVIPKQHAEKNF--PMGEGVGSGKGMLLNLEDMGGKVW 240
               E+LFEKTVTPSDVGKLNRLVIPK  AEK+F  P+G    S KGMLLN ED+ GKVW
Sbjct: 181 FKTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVW 240

Query: 241 RFRYSYWNSSQSYVLTRGWSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKA 300
           RFRYSYWNSSQSYVLT+GWSRFVKEK L AGD++ F RS   D++ +I        G K+
Sbjct: 241 RFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFI--------GWKS 300

Query: 301 ISEGGVKAVHVVKLFGVNILEVPLPVGRCGGEPKNQGVLLELQPSKKQRII 330
            S   ++   V++LFGV+I    + V +     +   VL+     KKQR++
Sbjct: 301 KSGLDLETGRVMRLFGVDISLNAVVVVK-----ETTEVLMSSLRCKKQRVL 333

[Close]

BLAST of Cp4.1LG13g03410 vs. ExPASy Swiss-Prot
Match: Q8RZX9 (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0693400 PE=2 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.4e-83
Identity = 181/317 (57.10%), Postives = 207/317 (65.30%), Query Frame = 0


Query: 41  KLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNF 100
           KLPSS+FKGVVPQPNGRWGAQIYE+HQRVWLGTF  E  AA AYD+AA RFRGRDAVTNF
Sbjct: 76  KLPSSKFKGVVPQPNGRWGAQIYERHQRVWLGTFAGEDDAARAYDVAAQRFRGRDAVTNF 135

Query: 101 KSLEDDDDNDGMEGEFLKSHSKMEIVDMLRKHTYNEELEQRKRQRGA---IAAANTAVHH 160
           + L + D +   E  FL + SK E+VDMLRKHTY +EL Q KR   A    AA  TA   
Sbjct: 136 RPLAEADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLS 195

Query: 161 SGSDSK----------REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFP--MGEGVGSGKG 220
           +G  S           R+ LF+KTVTPSDVGKLNRLVIPKQHAEK+FP  +    G  KG
Sbjct: 196 NGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKG 255

Query: 221 MLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWSRFVKEKSLRAGDVVRFLR---STGADK 280
           +LLN ED  GKVWRFRYSYWNSSQSYVLT+GWSRFVKEK L AGDVV F R   S G D 
Sbjct: 256 VLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDG 315

Query: 281 QLYIDGKAISEGGVKAISEGGVKA---VHVVKLFGVNILEVPLPVGRCGGEPKNQGVLLE 333
           +L+ID K +   G    S     A   V  V+LFGV++L  P PV +  G  + + +   
Sbjct: 316 KLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAPAPVEQMAGCKRARDLAAT 375

[Close]

BLAST of Cp4.1LG13g03410 vs. NCBI nr
Match: XP_023549821.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 662 bits (1707), Expect = 1.06e-239
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60
           MDASSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60

Query: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSH 120
           QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSH
Sbjct: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSH 120

Query: 121 SKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSGSDSKREVLFEKTVTPSDVGKL 180
           SKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSGSDSKREVLFEKTVTPSDVGKL
Sbjct: 121 SKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSGSDSKREVLFEKTVTPSDVGKL 180

Query: 181 NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWSRF 240
           NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWSRF
Sbjct: 181 NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWSRF 240

Query: 241 VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAISEGGVKAVHVVKLFGVNILEV 300
           VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAISEGGVKAVHVVKLFGVNILEV
Sbjct: 241 VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAISEGGVKAVHVVKLFGVNILEV 300

Query: 301 PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL 332
           PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL
Sbjct: 301 PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL 332

[Close]

BLAST of Cp4.1LG13g03410 vs. NCBI nr
Match: KAG7034829.1 (AP2/ERF and B3 domain-containing transcription factor RAV1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 622 bits (1605), Expect = 2.78e-224
Identity = 314/332 (94.58%), Postives = 318/332 (95.78%), Query Frame = 0


Query: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60
           MDASSIDES GSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 1   MDASSIDESRGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60

Query: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSH 120
           QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSL+D+DDND MEGEFL SH
Sbjct: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDEDDNDAMEGEFLNSH 120

Query: 121 SKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSGSDSKREVLFEKTVTPSDVGKL 180
           SK+EIVDMLRKHTYNEELEQ KRQRGAIAAANTAVHHSG DSKREVLFEKTVTPSDVGKL
Sbjct: 121 SKLEIVDMLRKHTYNEELEQSKRQRGAIAAANTAVHHSGVDSKREVLFEKTVTPSDVGKL 180

Query: 181 NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWSRF 240
           NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLT+GWSRF
Sbjct: 181 NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKGWSRF 240

Query: 241 VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAISEGGVKAVHVVKLFGVNILEV 300
           VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISE        GGVKAVHVVKLFGVNILEV
Sbjct: 241 VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISE--------GGVKAVHVVKLFGVNILEV 300

Query: 301 PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL 332
           PLPVGRCGGEPKNQGVLLEL PSKKQRIIKAL
Sbjct: 301 PLPVGRCGGEPKNQGVLLELPPSKKQRIIKAL 324

[Close]

BLAST of Cp4.1LG13g03410 vs. NCBI nr
Match: KAG6579288.1 (AP2/ERF and B3 domain-containing transcription factor RAV1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 622 bits (1603), Expect = 5.61e-224
Identity = 314/332 (94.58%), Postives = 318/332 (95.78%), Query Frame = 0


Query: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60
           MDASSIDES GSDSTSISPVTPLLFHSSPA GMPHEAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 1   MDASSIDESRGSDSTSISPVTPLLFHSSPASGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60

Query: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSH 120
           QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSL+D+DDND MEGEFL SH
Sbjct: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDEDDNDAMEGEFLNSH 120

Query: 121 SKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSGSDSKREVLFEKTVTPSDVGKL 180
           SK+EIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSG DSKREVLFEKTVTPSDVGKL
Sbjct: 121 SKLEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSGVDSKREVLFEKTVTPSDVGKL 180

Query: 181 NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWSRF 240
           NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLT+GWSRF
Sbjct: 181 NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKGWSRF 240

Query: 241 VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAISEGGVKAVHVVKLFGVNILEV 300
           VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISE        GGVKAVHVVKLFGVNILEV
Sbjct: 241 VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISE--------GGVKAVHVVKLFGVNILEV 300

Query: 301 PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL 332
           PLPVGRCGGEPKNQGVLLEL PSKKQRIIKAL
Sbjct: 301 PLPVGRCGGEPKNQGVLLELPPSKKQRIIKAL 324

[Close]

BLAST of Cp4.1LG13g03410 vs. NCBI nr
Match: XP_022922118.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita moschata])

HSP 1 Score: 620 bits (1600), Expect = 1.61e-223
Identity = 313/332 (94.28%), Postives = 317/332 (95.48%), Query Frame = 0


Query: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60
           MDASSIDES GSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 1   MDASSIDESRGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60

Query: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSH 120
           QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSL+D+DD D MEGEFL SH
Sbjct: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDEDDKDAMEGEFLNSH 120

Query: 121 SKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSGSDSKREVLFEKTVTPSDVGKL 180
           SK+EIVDMLRKHTYNEELEQ KRQRGAIAAANTAVHHSG DSKREVLFEKTVTPSDVGKL
Sbjct: 121 SKLEIVDMLRKHTYNEELEQSKRQRGAIAAANTAVHHSGVDSKREVLFEKTVTPSDVGKL 180

Query: 181 NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWSRF 240
           NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLT+GWSRF
Sbjct: 181 NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKGWSRF 240

Query: 241 VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAISEGGVKAVHVVKLFGVNILEV 300
           VKEKSLRAGDVVRFLRSTGADKQLYIDGKA SE        GGVKAVHVVKLFGVNILEV
Sbjct: 241 VKEKSLRAGDVVRFLRSTGADKQLYIDGKATSE--------GGVKAVHVVKLFGVNILEV 300

Query: 301 PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL 332
           PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL
Sbjct: 301 PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL 324

[Close]

BLAST of Cp4.1LG13g03410 vs. NCBI nr
Match: XP_022974368.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita maxima])

HSP 1 Score: 621 bits (1602), Expect = 2.02e-223
Identity = 312/332 (93.98%), Postives = 318/332 (95.78%), Query Frame = 0


Query: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60
           MDASSIDESSGSDSTSISP+TPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 26  MDASSIDESSGSDSTSISPITPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 85

Query: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSH 120
           QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSL+DDDDND MEGEFL SH
Sbjct: 86  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDDDDNDAMEGEFLNSH 145

Query: 121 SKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSGSDSKREVLFEKTVTPSDVGKL 180
           SK+EIVDMLRKHTYNEEL+Q KRQRGAIAAANT VHHSG DSKREVLFEKTVTPSDVGKL
Sbjct: 146 SKLEIVDMLRKHTYNEELQQSKRQRGAIAAANTPVHHSGVDSKREVLFEKTVTPSDVGKL 205

Query: 181 NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWSRF 240
           NRLVIPKQHAEKNFP GEG+GSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLT+GWSRF
Sbjct: 206 NRLVIPKQHAEKNFPTGEGLGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKGWSRF 265

Query: 241 VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAISEGGVKAVHVVKLFGVNILEV 300
           VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISE        GGVKAVHVVKLFGVNILEV
Sbjct: 266 VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISE--------GGVKAVHVVKLFGVNILEV 325

Query: 301 PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL 332
           PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL
Sbjct: 326 PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL 349

[Close]

BLAST of Cp4.1LG13g03410 vs. ExPASy TrEMBL
Match: A0A6J1E5P2 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita moschata OX=3662 GN=LOC111430186 PE=3 SV=1)

HSP 1 Score: 620 bits (1600), Expect = 7.78e-224
Identity = 313/332 (94.28%), Postives = 317/332 (95.48%), Query Frame = 0


Query: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60
           MDASSIDES GSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 1   MDASSIDESRGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60

Query: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSH 120
           QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSL+D+DD D MEGEFL SH
Sbjct: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDEDDKDAMEGEFLNSH 120

Query: 121 SKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSGSDSKREVLFEKTVTPSDVGKL 180
           SK+EIVDMLRKHTYNEELEQ KRQRGAIAAANTAVHHSG DSKREVLFEKTVTPSDVGKL
Sbjct: 121 SKLEIVDMLRKHTYNEELEQSKRQRGAIAAANTAVHHSGVDSKREVLFEKTVTPSDVGKL 180

Query: 181 NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWSRF 240
           NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLT+GWSRF
Sbjct: 181 NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKGWSRF 240

Query: 241 VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAISEGGVKAVHVVKLFGVNILEV 300
           VKEKSLRAGDVVRFLRSTGADKQLYIDGKA SE        GGVKAVHVVKLFGVNILEV
Sbjct: 241 VKEKSLRAGDVVRFLRSTGADKQLYIDGKATSE--------GGVKAVHVVKLFGVNILEV 300

Query: 301 PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL 332
           PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL
Sbjct: 301 PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL 324

[Close]

BLAST of Cp4.1LG13g03410 vs. ExPASy TrEMBL
Match: A0A6J1IG08 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita maxima OX=3661 GN=LOC111472990 PE=3 SV=1)

HSP 1 Score: 621 bits (1602), Expect = 9.78e-224
Identity = 312/332 (93.98%), Postives = 318/332 (95.78%), Query Frame = 0


Query: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60
           MDASSIDESSGSDSTSISP+TPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 26  MDASSIDESSGSDSTSISPITPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 85

Query: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSH 120
           QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSL+DDDDND MEGEFL SH
Sbjct: 86  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDDDDNDAMEGEFLNSH 145

Query: 121 SKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSGSDSKREVLFEKTVTPSDVGKL 180
           SK+EIVDMLRKHTYNEEL+Q KRQRGAIAAANT VHHSG DSKREVLFEKTVTPSDVGKL
Sbjct: 146 SKLEIVDMLRKHTYNEELQQSKRQRGAIAAANTPVHHSGVDSKREVLFEKTVTPSDVGKL 205

Query: 181 NRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWSRF 240
           NRLVIPKQHAEKNFP GEG+GSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLT+GWSRF
Sbjct: 206 NRLVIPKQHAEKNFPTGEGLGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKGWSRF 265

Query: 241 VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAISEGGVKAVHVVKLFGVNILEV 300
           VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISE        GGVKAVHVVKLFGVNILEV
Sbjct: 266 VKEKSLRAGDVVRFLRSTGADKQLYIDGKAISE--------GGVKAVHVVKLFGVNILEV 325

Query: 301 PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL 332
           PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL
Sbjct: 326 PLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL 349

[Close]

BLAST of Cp4.1LG13g03410 vs. ExPASy TrEMBL
Match: A0A6J1EPB7 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita moschata OX=3662 GN=LOC111436555 PE=3 SV=1)

HSP 1 Score: 469 bits (1206), Expect = 8.19e-164
Identity = 246/336 (73.21%), Postives = 276/336 (82.14%), Query Frame = 0


Query: 4   SSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGAQIY 63
           SS+D+S+ SDSTS+SPVTPLLFHSS +PG+PH+AESRKLPSSRFKGVVPQPNGRWGAQIY
Sbjct: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWGAQIY 64

Query: 64  EKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSHSKM 123
           EKHQRVWLGTFN EH AA AYDIAALRFRGRDAVTNFK       +   E +FL SHSK+
Sbjct: 65  EKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKL 124

Query: 124 EIVDMLRKHTYNEELEQRKRQRGAI-------AAANTAVHHSGSDSKREVLFEKTVTPSD 183
           EIVDMLRKHTYN+EL+Q KR  G         AAA  ++ ++ S+S REVLFEKTVTPSD
Sbjct: 125 EIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFEKTVTPSD 184

Query: 184 VGKLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRG 243
           VGKLNRLVIPKQHAEKNFP+GEG+GS KG+LLN EDMGGK+WRFRYSYWNSSQSYVLT+G
Sbjct: 185 VGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYVLTKG 244

Query: 244 WSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAISEGGVKAVHVVKLFGVN 303
           WSRFVKEK+LRAGDVVRFLRSTG DK+LYIDG+A           GGVK V VVKLFGVN
Sbjct: 245 WSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRA-----------GGVKPVQVVKLFGVN 304

Query: 304 ILEVPLPVGRCGGEPKNQGVLLELQPSKKQRIIKAL 332
           ILEVP  VG CG   +++  L EL+ +KKQRIIKAL
Sbjct: 305 ILEVP--VGWCG--KRDREGLSELERTKKQRIIKAL 325

[Close]

BLAST of Cp4.1LG13g03410 vs. ExPASy TrEMBL
Match: A0A5D3BWI9 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00090 PE=3 SV=1)

HSP 1 Score: 467 bits (1202), Expect = 2.88e-163
Identity = 255/339 (75.22%), Postives = 277/339 (81.71%), Query Frame = 0


Query: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60
           M+ASSIDES+ SDSTSISPVTPLLFHSSP+     EAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 1   MEASSIDESTASDSTSISPVTPLLFHSSPSATA--EAESRKLPSSRFKGVVPQPNGRWGA 60

Query: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSH 120
           QIYEKHQRVWLGTFN+E+ AA AYDIAALRFRGRDAVTNFK   + D +  +E +FL SH
Sbjct: 61  QIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDHALEADFLNSH 120

Query: 121 SKMEIVDMLRKHTYNEELEQRKR-QRGAIAAANTAVHH-----SGSDSKREVLFEKTVTP 180
           SK+EIVDMLRKHTYNEEL+Q KR QRGA+A  + +  H     SGSDSKREVLFEKTVTP
Sbjct: 121 SKLEIVDMLRKHTYNEELQQSKRHQRGAMAVDSGSFPHYSGSGSGSDSKREVLFEKTVTP 180

Query: 181 SDVGKLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLT 240
           SDVGKLNRLVIPKQHAEKNFPM EGV SGKGMLLN EDMGGKVWRFRYSYWNSSQSYVLT
Sbjct: 181 SDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT 240

Query: 241 RGWSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAISEGGVKAVHVVKLFG 300
           +GWSRFVK+ +LRAGDVVRFLRSTG DKQLYI            I+  G+K VHVVKLFG
Sbjct: 241 KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIH--------ANPINAPGIKPVHVVKLFG 300

Query: 301 VNILEVPLPVGRCGGEPKNQGVLLELQ-PSKKQRIIKAL 332
           VNIL+  LPVG      K +G  LELQ P+KKQRIIK L
Sbjct: 301 VNILQ--LPVG------KTEGAFLELQQPTKKQRIIKPL 321

[Close]

BLAST of Cp4.1LG13g03410 vs. ExPASy TrEMBL
Match: A0A1S3CPL6 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo OX=3656 GN=LOC103503374 PE=2 SV=1)

HSP 1 Score: 467 bits (1201), Expect = 4.09e-163
Identity = 254/339 (74.93%), Postives = 277/339 (81.71%), Query Frame = 0


Query: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60
           M+ASSIDES+ SDSTSISPVTPLLFHSSP+     EAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 1   MEASSIDESTASDSTSISPVTPLLFHSSPSATA--EAESRKLPSSRFKGVVPQPNGRWGA 60

Query: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLEDDDDNDGMEGEFLKSH 120
           QIYEKHQRVWLGTFN+E+ AA AYDIAALRFRGRDAVTNFK   + D +  +E +FL SH
Sbjct: 61  QIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDHALEADFLNSH 120

Query: 121 SKMEIVDMLRKHTYNEELEQRKR-QRGAIAAANTAVHH-----SGSDSKREVLFEKTVTP 180
           SK+EIVDMLRKHTYNEEL+Q KR QRGA+A  + +  H     SGSDSKREVLFEKTVTP
Sbjct: 121 SKLEIVDMLRKHTYNEELQQSKRHQRGAMAVDSGSFPHYSGSGSGSDSKREVLFEKTVTP 180

Query: 181 SDVGKLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLT 240
           SDVGKLNRLVIPKQHAEKNFPM EGV SGKGMLLN EDMGGKVWRFRYSYWNSSQSYVLT
Sbjct: 181 SDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT 240

Query: 241 RGWSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAISEGGVKAVHVVKLFG 300
           +GWSRFVK+ +LRAGDVVRFLRSTG DKQLYI            I+  G+K VHVVKLFG
Sbjct: 241 KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIH--------ANPINAPGIKPVHVVKLFG 300

Query: 301 VNILEVPLPVGRCGGEPKNQGVLLELQ-PSKKQRIIKAL 332
           VNIL+  LPVG      K +G  LELQ P+KKQR+IK L
Sbjct: 301 VNILQ--LPVG------KTEGAFLELQQPTKKQRVIKPL 321

[Close]

BLAST of Cp4.1LG13g03410 vs. TAIR 10
Match: AT1G13260.1 (related to ABI3/VP1 1 )

HSP 1 Score: 339.3 bits (869), Expect = 3.4e-93
Identity = 199/355 (56.06%), Postives = 232/355 (65.35%), Query Frame = 0


Query: 1   MDASSIDESSGS-----DSTSISPVTPLLFHSSPAPGMPH----------EAESRKLPSS 60
           M++SS+DES+ S     ++ +I+P       +    G             EAESRKLPSS
Sbjct: 1   MESSSVDESTTSTGSICETPAITPAKKSSVGNLYRMGSGSSVVLDSENGVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLED 120
           ++KGVVPQPNGRWGAQIYEKHQRVWLGTFN+E  AA AYD+A  RFR RDAVTNFK ++ 
Sbjct: 61  KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDVKM 120

Query: 121 DDDNDGMEGEFLKSHSKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSGSDS--- 180
           D+D    E +FL SHSK EIVDMLRKHTYNEELEQ KR+R         +  SG  +   
Sbjct: 121 DED----EVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGV 180

Query: 181 ------KREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGK 240
                   E LFEK VTPSDVGKLNRLVIPK HAEK+FP+     S KG+LLN ED+ GK
Sbjct: 181 STTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGK 240

Query: 241 VWRFRYSYWNSSQSYVLTRGWSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGV 300
           VWRFRYSYWNSSQSYVLT+GWSRFVKEK+LRAGDVV F RS G D+QLYI        G 
Sbjct: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYI--------GW 300

Query: 301 KAISEGGVKAVHVVKLFGVNILEVPLPVGRCGGEPKNQGVLLELQPSKKQRIIKA 332
           K+ S   + A  V++LFGVNI          G +  N   +L L  SKKQRI  A
Sbjct: 301 KSRSGSDLDAGRVLRLFGVNISPESSRNDVVGNKRVNDTEMLSLVCSKKQRIFHA 343

[Close]

BLAST of Cp4.1LG13g03410 vs. TAIR 10
Match: AT1G68840.1 (related to ABI3/VP1 2 )

HSP 1 Score: 335.1 bits (858), Expect = 6.4e-92
Identity = 205/364 (56.32%), Postives = 236/364 (64.84%), Query Frame = 0


Query: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPA------------------PGMPHEAESRKL 60
           MD+S IDE S S S S S  T       PA                  P    E ESRKL
Sbjct: 1   MDSSCIDEISSSTSESFSATTAKKLSPPPAAALRLYRMGSGGSSVVLDPENGLETESRKL 60

Query: 61  PSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKS 120
           PSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN++  AA +YDIAA RFRGRDAV NFK+
Sbjct: 61  PSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKN 120

Query: 121 LEDDDDNDGMEGEFLKSHSKMEIVDMLRKHTYNEELEQ-RKRQRGAIAAANTAVHHSGSD 180
           + +D D       FL++HSK EIVDMLRKHTY +ELEQ  KRQ      AN   + S + 
Sbjct: 121 VLEDGDL-----AFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTT 180

Query: 181 SK------REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPM-GEGVGSGKGMLLNLEDMG 240
                   REVLFEK VTPSDVGKLNRLVIPKQHAEK+FP+        KG+L+N ED+ 
Sbjct: 181 QNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVN 240

Query: 241 GKVWRFRYSYWNSSQSYVLTRGWSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEG 300
           GKVWRFRYSYWNSSQSYVLT+GWSRFVKEK+LRAGDVV F RSTG ++QLYID K  S  
Sbjct: 241 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVRS-- 300

Query: 301 GVKAISEGGVKAVHVVKLFGVNILEVPL-----PVGRCGGE-PKNQGVLLELQPSKKQRI 333
                 E  V+   VV+LFGV+I  V        V  CGG+  ++   +  L+ SKKQ I
Sbjct: 301 ---GPRENPVQV--VVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAI 352

[Close]

BLAST of Cp4.1LG13g03410 vs. TAIR 10
Match: AT1G25560.1 (AP2/B3 transcription factor family protein )

HSP 1 Score: 335.1 bits (858), Expect = 6.4e-92
Identity = 193/317 (60.88%), Postives = 217/317 (68.45%), Query Frame = 0


Query: 36  EAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRD 95
           E ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN+E  AA++YDIA  RFRGRD
Sbjct: 61  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRD 120

Query: 96  AVTNFKSLEDDDDNDGMEGEFLKSHSKMEIVDMLRKHTYNEELEQRKRQ----RGAIAAA 155
           AVTNFKS  D +D    E  FL +HSK EIVDMLRKHTY +E EQ +R+     G  +  
Sbjct: 121 AVTNFKSQVDGND---AESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGDGKRSGL 180

Query: 156 NTAVHHSGSDS---KREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFP-------MGEGVG 215
            TA +  G+D+    REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FP       MG    
Sbjct: 181 ETATY--GNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPS 240

Query: 216 SGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTRGWSRFVKEKSLRAGDVVRFLRSTGAD 275
             KG+L+NLED  GKVWRFRYSYWNSSQSYVLT+GWSRFVKEK+LRAGDVV F RSTG D
Sbjct: 241 PTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPD 300

Query: 276 KQLYIDGKAISEGGVKAISEGGVKAVHVVKLFGVNILEV------PLPVGRCGGEPKNQG 333
           +QLYI  K  S                VV+LFGVNI  V       + V   G +   + 
Sbjct: 301 RQLYIHWKVRSS-----------PVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSRED 360

[Close]

BLAST of Cp4.1LG13g03410 vs. TAIR 10
Match: AT1G68840.2 (related to ABI3/VP1 2 )

HSP 1 Score: 335.1 bits (858), Expect = 6.4e-92
Identity = 205/364 (56.32%), Postives = 236/364 (64.84%), Query Frame = 0


Query: 1   MDASSIDESSGSDSTSISPVTPLLFHSSPA------------------PGMPHEAESRKL 60
           MD+S IDE S S S S S  T       PA                  P    E ESRKL
Sbjct: 1   MDSSCIDEISSSTSESFSATTAKKLSPPPAAALRLYRMGSGGSSVVLDPENGLETESRKL 60

Query: 61  PSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKS 120
           PSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN++  AA +YDIAA RFRGRDAV NFK+
Sbjct: 61  PSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKN 120

Query: 121 LEDDDDNDGMEGEFLKSHSKMEIVDMLRKHTYNEELEQ-RKRQRGAIAAANTAVHHSGSD 180
           + +D D       FL++HSK EIVDMLRKHTY +ELEQ  KRQ      AN   + S + 
Sbjct: 121 VLEDGDL-----AFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTT 180

Query: 181 SK------REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPM-GEGVGSGKGMLLNLEDMG 240
                   REVLFEK VTPSDVGKLNRLVIPKQHAEK+FP+        KG+L+N ED+ 
Sbjct: 181 QNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVN 240

Query: 241 GKVWRFRYSYWNSSQSYVLTRGWSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEG 300
           GKVWRFRYSYWNSSQSYVLT+GWSRFVKEK+LRAGDVV F RSTG ++QLYID K  S  
Sbjct: 241 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVRS-- 300

Query: 301 GVKAISEGGVKAVHVVKLFGVNILEVPL-----PVGRCGGE-PKNQGVLLELQPSKKQRI 333
                 E  V+   VV+LFGV+I  V        V  CGG+  ++   +  L+ SKKQ I
Sbjct: 301 ---GPRENPVQV--VVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAI 352

[Close]

BLAST of Cp4.1LG13g03410 vs. TAIR 10
Match: AT3G25730.1 (ethylene response DNA binding factor 3 )

HSP 1 Score: 316.2 bits (809), Expect = 3.1e-86
Identity = 193/351 (54.99%), Postives = 228/351 (64.96%), Query Frame = 0


Query: 1   MDA-SSIDESSGSDST-----SISPV---------TPLLFHSSPAPGMPHEAESRKLPSS 60
           MDA SS+DESS +  +     S SP          T ++  S     +  EAESRKLPSS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLED 120
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFN+E  AA AYD+AA RFRGRDAVTNFK    
Sbjct: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTF 120

Query: 121 DDDNDGMEGEFLKSHSKMEIVDMLRKHTYNEELEQRKRQRGAIAAANTAVHHSG-----S 180
           ++     E EFL +HSK EIVDMLRKHTY EEL+QRKR R       TA   +       
Sbjct: 121 EE-----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTG 180

Query: 181 DSKREVLFEKTVTPSDVGKLNRLVIPKQHAEKNF--PMGEGVGSGKGMLLNLEDMGGKVW 240
               E+LFEKTVTPSDVGKLNRLVIPK  AEK+F  P+G    S KGMLLN ED+ GKVW
Sbjct: 181 FKTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVW 240

Query: 241 RFRYSYWNSSQSYVLTRGWSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKA 300
           RFRYSYWNSSQSYVLT+GWSRFVKEK L AGD++ F RS   D++ +I        G K+
Sbjct: 241 RFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFI--------GWKS 300

Query: 301 ISEGGVKAVHVVKLFGVNILEVPLPVGRCGGEPKNQGVLLELQPSKKQRII 330
            S   ++   V++LFGV+I    + V +     +   VL+     KKQR++
Sbjct: 301 KSGLDLETGRVMRLFGVDISLNAVVVVK-----ETTEVLMSSLRCKKQRVL 333

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g03410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZWM9	4.8e-92	56.06	AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thalia...	[more]
P82280	9.0e-91	56.32	AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis tha...	[more]
Q9C6M5	9.0e-91	60.88	AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis tha...	[more]
Q9LS06	4.3e-85	54.99	AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thali...	[more]
Q8RZX9	1.4e-83	57.10	AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. jap...	[more]

BLAST of Cp4.1LG13g03410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549821.1	1.06e-239	100.00	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita pepo ...	[more]
KAG7034829.1	2.78e-224	94.58	AP2/ERF and B3 domain-containing transcription factor RAV1, partial [Cucurbita a...	[more]
KAG6579288.1	5.61e-224	94.58	AP2/ERF and B3 domain-containing transcription factor RAV1, partial [Cucurbita a...	[more]
XP_022922118.1	1.61e-223	94.28	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita mosch...	[more]
XP_022974368.1	2.02e-223	93.98	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita maxim...	[more]

BLAST of Cp4.1LG13g03410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5P2	7.78e-224	94.28	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita mos...	[more]
A0A6J1IG08	9.78e-224	93.98	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita max...	[more]
A0A6J1EPB7	8.19e-164	73.21	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita mos...	[more]
A0A5D3BWI9	2.88e-163	75.22	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo ...	[more]
A0A1S3CPL6	4.09e-163	74.93	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo ...	[more]

BLAST of Cp4.1LG13g03410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13260.1	3.4e-93	56.06	related to ABI3/VP1 1	[more]
AT1G68840.1	6.4e-92	56.32	related to ABI3/VP1 2	[more]
AT1G25560.1	6.4e-92	60.88	AP2/B3 transcription factor family protein	[more]
AT1G68840.2	6.4e-92	56.32	related to ABI3/VP1 2	[more]
AT3G25730.1	3.1e-86	54.99	ethylene response DNA binding factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 83..103 score: 50.74 coord: 47..58 score: 33.94
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 46..107 e-value: 2.6E-27 score: 106.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 45..93 e-value: 8.1E-7 score: 29.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 46..101 score: 19.73035
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 45..100 e-value: 2.89673E-24 score: 91.9495
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 168..270 e-value: 3.1E-24 score: 96.5
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 168..262 e-value: 2.6E-27 score: 94.6
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 168..270 score: 14.381359
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 167..254 e-value: 4.64713E-29 score: 105.488
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 45..102 e-value: 8.2E-20 score: 72.7
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 157..275 e-value: 3.5E-43 score: 148.1
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 166..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	PANTHER	PTHR31140:SF1	AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR TEM1	coord: 33..303
IPR044800	B3 domain-containing transcription factor LEC2-like	PANTHER	PTHR31140	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	coord: 33..303
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 45..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g03410.1	Cp4.1LG13g03410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity