Cp4.1LG11g08210 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g08210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	tetratricopeptide repeat protein 1
Location	Cp4.1LG11: 6684312 .. 6687826 (+)
RNA-Seq Expression	Cp4.1LG11g08210
Synteny	Cp4.1LG11g08210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTCTTCTCTCCCTAAAACCCAGAATCTGAGAACCAAATCGTTCCAAAATCTTAGAATTTTGTTGATTCGTGGGTGAAAATGGTTCGGATAGAAATGGAGGAATCCGAGGACGAAGTTCCCAGTCCTCCGAAGGCCTCTGCATCAACCCAAAAAACGATGGATTCAAGCGGTGTTCCGTCAACATCTAGTGCGAGCAAAGAACCTTCCGATGGCTACGAGACTGCCAGCGATGGGGAGCTTGGTGATAGTGGTGATGAGAATCAACAGCATCCTGAACAACATCCAGAACACGAGGAACAAATTGCCGCGCTCAGTGAAGATGAGATTAAAGAGGTCTTTCCCTCCTTTGAGCTCTGTTTAGTGCTGTTTGTTTTTTTTTTTTTGCTTGGCAATTGGTTTCTTTTGCTTTCTGCGATCAGCATTATCGGCAATAACATTAATGATTCAATTTCTCTGGTATCCATTTTAACTTTAAAGTAGTTCATGTGTTGTTTTTCCCCTTCTCCAATTTCAATTTTGTTTGAAGTTTTCTACAGCTCTTAACCTGGACCGTAATGATGTTCGACGATTGGATCATTTACTCTGCTGACGATTTTGGTTCCACATTGAAATGTTTGAATGAGTATTGATGAATGTATGCAAATGAATTGTCTTCATATCGCTTTGATCTTGATATCACGGACAGTTGATTTGTGTTTTCGTGTGCGAGAAGAAAAACCCGTTCTCAAAGAATTTCGGATTGTAGGGAATTTTAAGTTGTGGATATTTTGATGGAGCCAAGGGAACTGTTGGACAGCTTGTGATTTGTTTAGGATCTTGATTTTCCTTGTTGGTTGGGATGACATGACCTACCGACATGATTCTTATACAGCTCTCGTTGATTATTTTCCTCTAATTATGAGAAACAGGTCTCTTTTATCTAGAAATAAGTAATTGGTAAATGGATATCTAAGCTATTAAAATTTTGTTATTGACATGATATGTTCGTCCTTCATGCAAGCTTAAAATTTTCTTGGTTCATTTTTTCTTGAGTCGTGTGGATCTGAATCTTTCTATTACATATCTGGCAGAAAGCCTTGGCTGAAGCAAATAATGCAAAGTTGGCGGGCAATAAACTGTTTGGAGAAGGGAAATATGAGGAAGCAATAATGGAGTATGATCGTGCTTTGAACATTGCTCCGGACATGCCCTCTGCAGTGGAGTTACGGTCCATATGCCATGCAAACCGTGGCGTGTGTTTTCTGAAACTAGTATGTTTTCTCGATCTGAAATGAAAAAGACTGCCTTGTGTTATCTTGTTTATATATTTTTCTCCATTTTTTTTTATGCATTACAGCCATATTCATATTTTTTATGTCTTCACGAATGTCACTAGAGGGTTACACGTCCAATTTTAATGATCTATGCGATCTTACGTTAGCATGCTTAATTTCTACACGGATGCTGTTGTTAGTCCCAATTTCAGTTTTTGTTAATCTTGAGGCTATTATGAGTGGCTTCAATAATCACCAACCCAGAAAGATGGTGATTTATTGAAATTTCCATTCATAAATATAGGAACATGTGCAATTTTGTGAAGACCTTGAATAATTTGGGGGATGTGCTGTTGCTTTCTCTCCTCCTCCCTCTTTTAAATTGGAAACAGAAGCTTTTGAATGACCTGAAAGTACAAATTTGAAATCACCTCTCCATGTGAAAGATTCATTTTTTCTGATATCATGTGGTCATTCTTTCAAACTCGTTGTGTAGGATCTCTGGACTTTGCCGATTAATGCCTAGTCTTCGGGCTAGAAAGGAGTTGAAAACTCTTAATCGGGATAGATATAAGCTACTATTATTTCTAGGATACTGTTAGCTGCTTCTTCTTGGGGGATGATGGACAAATATTTTATAATTACTCTGTGATTTTTTGACTTGGGGAGGTCTTTTGGAATACTTTTGCCCAATTTCAAGTAGAAGCCTCGTCTACGCTCGGCATTAATGATTTCGATATCTAAGTTGAACCCATTAAAAATAAATACATAAATAAACTGAAGTCGGGAGGGCTATCGCATGAAAATTATGATCCTTCAAAAAGCCAAGGCCTTGAGGATGTATTTGTTCTGTTCACATGCCTCAAATTTCTCCTTTGTCACTAAATATTAATATTATGCATGTATATTTTAACTTCTTAGTGCATGCATCTGAATTTTGGCTGTCTTGTGAACTTAATTTGTTCGCTAAACATTATTTTGGTCTGATTGCTTCCATTTTTCAATTAAGATGGATTGAATCTAGACCTTTCTTGTGAGGTTTTGCTTTAATTCCACATGCATTTTTTCTTCTCATCAGCAGGATAATGTATGTTTGTATCACGTAGTGATTATCTTGAACATAATTTGTTTTAAGGAAAAATATGATGAGACGATCAAAGCATGCTCAAAGGCAATTGAAATCAATCCTGCATATGTCAAAGCTTTGTCTAGAAGAGGAGAGGCTCACGAGAAGCTTGAACACTTTGAGGAGGCCATTCATGGTAAACTTTGCTTTGCTTATGTTACCTTAAAATGGTCAATCTTGCCTGCAGTTGTTTTCTTTAGAGCTTTCCATTTTGTTCTGGAACTGTTGTAGTAATCTTCCTTCCAACATATATCTTATCTATTTACAGATATGAAAAAGATATTGGAATTGGACTCGTCAAATGACCAAGCTAAGAAGGCCATCCGTCGCCTTGAACCATTAGCCGAACAAAAACGAGAAAAGATGAAAGAAGAGATGATTGGTACGCAGCATTATACTGTTTTAAAAGTCTTTTCAGTATCGTATTTCATTATTCTTTGTTTTAGAATCTGCTTCCCTACCGTTCAAAGATTAGTCACATGCATGCGAAGTAGTCGTTATTTCTCGATGGATGTTGCTACGCGCTAACAAAGAACCATGGCAGAGCCAATCGAGTTTTTTCATTCTAACTTTTTTACATATATAATCTTTATGTTAAACAAACTTTAAACTCGTAATTACTGCATTTTGTGCATCTAGACGAGTGAATACACATTGGATGTCGTTCGAACAATTACTTCGTCTTCCAAGTCGATATTTTTTGACCCTATTCATGAATTTGCAATGCTTCTGTTTGAGCAGGAAAGTTAAAAGACATGGGCAATTCTTTGTTGGGTCGTTTTGGCATGAGCGTGGACAACTTCAAGGCTGTCAAAGACCCAAATACTGGTTCCTATTCGATTTCATTCCAACAATAGCTTGGCTTTACCCGATTTGTATTTACGACGACGATGGTAAGAGAATAGTATACGGAAAAAGAATAAAAATCGATACCCGTTTGTACCGGGCGTTGTTCATTCCAGGATTTAATGAATATAATTGATGGTAGTGTTAAAATTTGGGGGTATAGTTTACTTGATCTTTCAGATGGCAAATTGCTGCTGTGTTTCCCCTGCATGCTGCTTTATTTGTTGGTTGTACCTTATGATTGTAGACTTTGCTGATTTGTTTAGTTCAAGGGTGATTTGTGAGTTT

mRNA sequence

TCGTCTTCTCTCCCTAAAACCCAGAATCTGAGAACCAAATCGTTCCAAAATCTTAGAATTTTGTTGATTCGTGGGTGAAAATGGTTCGGATAGAAATGGAGGAATCCGAGGACGAAGTTCCCAGTCCTCCGAAGGCCTCTGCATCAACCCAAAAAACGATGGATTCAAGCGGTGTTCCGTCAACATCTAGTGCGAGCAAAGAACCTTCCGATGGCTACGAGACTGCCAGCGATGGGGAGCTTGGTGATAGTGGTGATGAGAATCAACAGCATCCTGAACAACATCCAGAACACGAGGAACAAATTGCCGCGCTCAGTGAAGATGAGATTAAAGAGAAAGCCTTGGCTGAAGCAAATAATGCAAAGTTGGCGGGCAATAAACTGTTTGGAGAAGGGAAATATGAGGAAGCAATAATGGAGTATGATCGTGCTTTGAACATTGCTCCGGACATGCCCTCTGCAGTGGAGTTACGGTCCATATGCCATGCAAACCGTGGCGTGTGTTTTCTGAAACTAGAAAAATATGATGAGACGATCAAAGCATGCTCAAAGGCAATTGAAATCAATCCTGCATATGTCAAAGCTTTGTCTAGAAGAGGAGAGGCTCACGAGAAGCTTGAACACTTTGAGGAGGCCATTCATGATATGAAAAAGATATTGGAATTGGACTCGTCAAATGACCAAGCTAAGAAGGCCATCCGTCGCCTTGAACCATTAGCCGAACAAAAACGAGAAAAGATGAAAGAAGAGATGATTGGAAAGTTAAAAGACATGGGCAATTCTTTGTTGGGTCGTTTTGGCATGAGCGTGGACAACTTCAAGGCTGTCAAAGACCCAAATACTGGTTCCTATTCGATTTCATTCCAACAATAGCTTGGCTTTACCCGATTTGTATTTACGACGACGATGAATAAAAATCGATACCCGTTTGTACCGGGCGTTGTTCATTCCAGGATTTAATGAATATAATTGATGGTAGTGTTAAAATTTGGGGGTATAGTTTACTTGATCTTTCAGATGGCAAATTGCTGCTGTGTTTCCCCTGCATGCTGCTTTATTTGTTGGTTGTACCTTATGATTGTAGACTTTGCTGATTTGTTTAGTTCAAGGGTGATTTGTGAGTTT

Coding sequence (CDS)

ATGGTTCGGATAGAAATGGAGGAATCCGAGGACGAAGTTCCCAGTCCTCCGAAGGCCTCTGCATCAACCCAAAAAACGATGGATTCAAGCGGTGTTCCGTCAACATCTAGTGCGAGCAAAGAACCTTCCGATGGCTACGAGACTGCCAGCGATGGGGAGCTTGGTGATAGTGGTGATGAGAATCAACAGCATCCTGAACAACATCCAGAACACGAGGAACAAATTGCCGCGCTCAGTGAAGATGAGATTAAAGAGAAAGCCTTGGCTGAAGCAAATAATGCAAAGTTGGCGGGCAATAAACTGTTTGGAGAAGGGAAATATGAGGAAGCAATAATGGAGTATGATCGTGCTTTGAACATTGCTCCGGACATGCCCTCTGCAGTGGAGTTACGGTCCATATGCCATGCAAACCGTGGCGTGTGTTTTCTGAAACTAGAAAAATATGATGAGACGATCAAAGCATGCTCAAAGGCAATTGAAATCAATCCTGCATATGTCAAAGCTTTGTCTAGAAGAGGAGAGGCTCACGAGAAGCTTGAACACTTTGAGGAGGCCATTCATGATATGAAAAAGATATTGGAATTGGACTCGTCAAATGACCAAGCTAAGAAGGCCATCCGTCGCCTTGAACCATTAGCCGAACAAAAACGAGAAAAGATGAAAGAAGAGATGATTGGAAAGTTAAAAGACATGGGCAATTCTTTGTTGGGTCGTTTTGGCATGAGCGTGGACAACTTCAAGGCTGTCAAAGACCCAAATACTGGTTCCTATTCGATTTCATTCCAACAATAG

Protein sequence

MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDENQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNIAPDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLEHFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDNFKAVKDPNTGSYSISFQQ

Homology

[Close]

BLAST of Cp4.1LG11g08210 vs. ExPASy Swiss-Prot
Match: Q3ZBR5 (Tetratricopeptide repeat protein 1 OS=Bos taurus OX=9913 GN=TTC1 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.3e-31
Identity = 97/268 (36.19%), Postives = 146/268 (54.48%), Query Frame = 0


Query: 7   EESEDEVPSPPKASASTQKTM-----DSSGVPSTSSASKE----PSDGYETASDG--ELG 66
           +  E E   PP +S   Q +      D    P      +E     S  +ET   G  +L 
Sbjct: 21  DPQEAECLHPPVSSGKEQHSQSELLKDVDAQPQEDQGEEECFHDASASFETEEPGADKLE 80

Query: 67  DSGDENQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYD 126
           +  +++    E   E+  ++     DE K++   E++  K  GN+ F +G Y EA   Y 
Sbjct: 81  NKPEDDMNPSELDEEYLMELEKNMPDEEKKRRREESSRLKEEGNEQFKKGDYIEAESSYT 140

Query: 127 RALNIAPDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEA 186
           RAL   P      + RS+  +NR    +K EK +  I  CSKAI++NP+Y++A+ RR E 
Sbjct: 141 RALQTCPS--CFQKDRSVLFSNRAAARMKQEKKEMAISDCSKAIQLNPSYIRAILRRAEL 200

Query: 187 HEKLEHFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSL 246
           +EK +  +EA+ D K ILE D S  QA++A  RL    E++ E++KEEM+GKLKD+GN +
Sbjct: 201 YEKTDKLDEALEDYKSILEKDPSVHQAREACMRLPKQIEERNERLKEEMLGKLKDLGNLV 260

Query: 247 LGRFGMSVDNFKAVKDPNTGSYSISFQQ 264
           L  FG+S +NF+  +D +TGSYSI+F Q
Sbjct: 261 LRPFGLSTENFQIKQDSSTGSYSINFVQ 286

[Close]

BLAST of Cp4.1LG11g08210 vs. ExPASy Swiss-Prot
Match: Q91Z38 (Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.3e-31
Identity = 86/228 (37.72%), Postives = 130/228 (57.02%), Query Frame = 0


Query: 36  SSASKEPSDGYETASDGELGDSGDENQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAK 95
           S++ +E   G   A      DS  E  +      E+  ++     +E K+K   E+   K
Sbjct: 67  SASFEEEQPGAHVAGSKASDDSSSELDE------EYLIELEKNMPEEEKQKRREESAKLK 126

Query: 96  LAGNKLFGEGKYEEAIMEYDRALNIAPDMPSAVELRSICHANRGVCFLKLEKYDETIKAC 155
             GN+ F  G Y EA   Y +AL + P      + RS+  +NR    +K +K +  I  C
Sbjct: 127 EEGNERFKRGDYMEAESSYSQALQMCP--ACFQKDRSVLFSNRAAARMKQDKKETAITDC 186

Query: 156 SKAIEINPAYVKALSRRGEAHEKLEHFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQ 215
           SKAI++NP Y++A+ RR E +EK +  +EA+ D K +LE D S  QA++A  RL    E+
Sbjct: 187 SKAIQLNPTYIRAILRRAELYEKTDKLDEALEDYKSVLEKDPSVHQAREACMRLPKQIEE 246

Query: 216 KREKMKEEMIGKLKDMGNSLLGRFGMSVDNFKAVKDPNTGSYSISFQQ 264
           + E++KEEM+GKLKD+GN +L  FG+S +NF+  +D +TGSYSI+F Q
Sbjct: 247 RNERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINFVQ 286

[Close]

BLAST of Cp4.1LG11g08210 vs. ExPASy Swiss-Prot
Match: Q99614 (Tetratricopeptide repeat protein 1 OS=Homo sapiens OX=9606 GN=TTC1 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-30
Identity = 96/264 (36.36%), Postives = 144/264 (54.55%), Query Frame = 0


Query: 5   EMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDENQQH 64
           E E +   VP P    + ++   D           +E       + + E G    EN+ +
Sbjct: 25  EAECAGPPVPDPKNQHSQSKLLRDDEAHLQEDQGEEECFHDCSASFEEEPGADKVENKSN 84

Query: 65  PEQHPEH--EEQIAALSE---DEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALN 124
            + +     EE +  L +   DE K+K   E+   K  GN+ F +G Y EA   Y RAL 
Sbjct: 85  EDVNSSELDEEYLIELEKNMSDEEKQKRREESTRLKEEGNEQFKKGDYIEAESSYSRALE 144

Query: 125 IAPDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKL 184
           + P      + RSI  +NR    +K +K +  I  CSKAI++NP+Y++A+ RR E +EK 
Sbjct: 145 MCPS--CFQKERSILFSNRAAARMKQDKKEMAINDCSKAIQLNPSYIRAILRRAELYEKT 204

Query: 185 EHFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRF 244
           +  +EA+ D K ILE D S  QA++A  RL    E++ E++KEEM+GKLKD+GN +L  F
Sbjct: 205 DKLDEALEDYKSILEKDPSIHQAREACMRLPKQIEERNERLKEEMLGKLKDLGNLVLRPF 264

Query: 245 GMSVDNFKAVKDPNTGSYSISFQQ 264
           G+S +NF+  +D +TGSYSI+F Q
Sbjct: 265 GLSTENFQIKQDSSTGSYSINFVQ 286

[Close]

BLAST of Cp4.1LG11g08210 vs. ExPASy Swiss-Prot
Match: Q9CZW5 (Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 PE=1 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 56/152 (36.84%), Postives = 90/152 (59.21%), Query Frame = 0


Query: 79  SEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNIAPDMPSAVELRSICHANR 138
           S D ++  +L  A  AK  GNK F  GKYE+AI  Y  A+++ P   + V+L S  + NR
Sbjct: 105 SGDSLEMSSLDRAQAAKNKGNKYFKAGKYEQAIQCYTEAISLCPTEKN-VDL-STFYQNR 164

Query: 139 GVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLEHFEEAIHDMKKILELDS- 198
              F +L+K+ E  + C+KA+E+NP YVKAL RR +AHEKL++ +E + D+  +  L+  
Sbjct: 165 AAAFEQLQKWKEVAQDCTKAVELNPKYVKALFRRAKAHEKLDNKKECLEDVTAVCILEGF 224

Query: 199 SNDQ----AKKAIRRLEPLAEQKREKMKEEMI 226
            N+Q    A K ++ L     +++ K +E ++
Sbjct: 225 QNEQSMLLADKVLKLLGKENAKEKYKNREPLM 254

[Close]

BLAST of Cp4.1LG11g08210 vs. ExPASy Swiss-Prot
Match: Q75Q39 (Mitochondrial import receptor subunit TOM70 OS=Rattus norvegicus OX=10116 GN=Tomm70 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 55/152 (36.18%), Postives = 88/152 (57.89%), Query Frame = 0


Query: 79  SEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNIAPDMPSAVELRSICHANR 138
           S D ++  +L  A  AK  GNK F  GKYE+AI  Y  A+++ P   +A    S  + NR
Sbjct: 104 SGDSLEMSSLDRAQAAKNKGNKYFKAGKYEQAIQCYTEAISLCPTEKNAD--LSTFYQNR 163

Query: 139 GVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLEHFEEAIHDMKKILELDS- 198
              F +L+K+ E  + C+KA+E+NP YVKAL RR +AHEKL++ +E + D+  +  L+  
Sbjct: 164 AAAFEQLQKWKEVAQDCTKAVELNPKYVKALFRRAKAHEKLDNKKECLEDVTAVCILEGF 223

Query: 199 SNDQ----AKKAIRRLEPLAEQKREKMKEEMI 226
            N+Q    A K ++ L     +++ K +E ++
Sbjct: 224 QNEQSMLLADKVLKLLGKENAKEKYKNREPLM 253

[Close]

BLAST of Cp4.1LG11g08210 vs. NCBI nr
Match: XP_023522143.1 (tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo] >XP_023547337.1 tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496 bits (1276), Expect = 2.53e-176
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60
           MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60

Query: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI 120
           NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI
Sbjct: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180
           APDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE
Sbjct: 121 APDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQQ 263
           MSVDNFKAVKDPNTGSYSISFQQ
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Cp4.1LG11g08210 vs. NCBI nr
Match: XP_022999753.1 (tetratricopeptide repeat protein 1 [Cucurbita maxima])

HSP 1 Score: 489 bits (1258), Expect = 1.40e-173
Identity = 259/263 (98.48%), Postives = 261/263 (99.24%), Query Frame = 0


Query: 1   MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60
           MVRIEMEESEDEVPSPPKASASTQKT DSSGVPSTSSAS+EPSDGYETASDGELGDSGDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTTDSSGVPSTSSASQEPSDGYETASDGELGDSGDE 60

Query: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI 120
           NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI+EYDRALNI
Sbjct: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180
           APDMPSA ELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE
Sbjct: 121 APDMPSAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQQ 263
           MSVDNFKAVKDPNTGSYSISFQQ
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Cp4.1LG11g08210 vs. NCBI nr
Match: XP_022946519.1 (tetratricopeptide repeat protein 1 [Cucurbita moschata])

HSP 1 Score: 488 bits (1257), Expect = 2.00e-173
Identity = 259/263 (98.48%), Postives = 260/263 (98.86%), Query Frame = 0


Query: 1   MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60
           MVRIEMEESEDEVPSPPKASASTQKT DSSGVPSTSSASKEPSDGYETASDGELGDSGDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTTDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60

Query: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI 120
           NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI+EYDRALNI
Sbjct: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180
           APDMPSA ELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHE LE
Sbjct: 121 APDMPSAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHENLE 180

Query: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQQ 263
           MSVDNFKAVKDPNTGSYSISFQQ
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Cp4.1LG11g08210 vs. NCBI nr
Match: KAG7030071.1 (Tetratricopeptide repeat protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 484 bits (1245), Expect = 1.35e-171
Identity = 256/263 (97.34%), Postives = 260/263 (98.86%), Query Frame = 0


Query: 1   MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60
           MVRIEMEESEDEVPSPPKASASTQKT DSSG PST+SASKEPSDGYETASDGELGDSGDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTTDSSGGPSTASASKEPSDGYETASDGELGDSGDE 60

Query: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI 120
           NQQHPEQHP+HEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI+EYDRALNI
Sbjct: 61  NQQHPEQHPKHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180
           +PDMPSA ELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE
Sbjct: 121 SPDMPSAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQQ 263
           MSVDNFKAVKDPNTGSYSISFQQ
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Cp4.1LG11g08210 vs. NCBI nr
Match: KAG6599130.1 (Tetratricopeptide repeat protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 475 bits (1222), Expect = 3.59e-168
Identity = 251/258 (97.29%), Postives = 255/258 (98.84%), Query Frame = 0


Query: 6   MEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDENQQHP 65
           MEESEDEVPSPPKASASTQKT DSSG PST+SASKEPSDGYETASDGELGDSGDENQQHP
Sbjct: 1   MEESEDEVPSPPKASASTQKTTDSSGGPSTASASKEPSDGYETASDGELGDSGDENQQHP 60

Query: 66  EQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNIAPDMP 125
           EQHP+HEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI+EYDRALNI+PDMP
Sbjct: 61  EQHPKHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNISPDMP 120

Query: 126 SAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLEHFEEA 185
           SA ELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLEHFEEA
Sbjct: 121 SAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLEHFEEA 180

Query: 186 IHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDN 245
           IHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDN
Sbjct: 181 IHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDN 240

Query: 246 FKAVKDPNTGSYSISFQQ 263
           FKAVKDPNTGSYSISFQQ
Sbjct: 241 FKAVKDPNTGSYSISFQQ 258

[Close]

BLAST of Cp4.1LG11g08210 vs. ExPASy TrEMBL
Match: A0A6J1KKL8 (tetratricopeptide repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494007 PE=4 SV=1)

HSP 1 Score: 489 bits (1258), Expect = 6.80e-174
Identity = 259/263 (98.48%), Postives = 261/263 (99.24%), Query Frame = 0


Query: 1   MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60
           MVRIEMEESEDEVPSPPKASASTQKT DSSGVPSTSSAS+EPSDGYETASDGELGDSGDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTTDSSGVPSTSSASQEPSDGYETASDGELGDSGDE 60

Query: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI 120
           NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI+EYDRALNI
Sbjct: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180
           APDMPSA ELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE
Sbjct: 121 APDMPSAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQQ 263
           MSVDNFKAVKDPNTGSYSISFQQ
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Cp4.1LG11g08210 vs. ExPASy TrEMBL
Match: A0A6J1G423 (tetratricopeptide repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111450555 PE=4 SV=1)

HSP 1 Score: 488 bits (1257), Expect = 9.66e-174
Identity = 259/263 (98.48%), Postives = 260/263 (98.86%), Query Frame = 0


Query: 1   MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60
           MVRIEMEESEDEVPSPPKASASTQKT DSSGVPSTSSASKEPSDGYETASDGELGDSGDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTTDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60

Query: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI 120
           NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI+EYDRALNI
Sbjct: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180
           APDMPSA ELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHE LE
Sbjct: 121 APDMPSAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHENLE 180

Query: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQQ 263
           MSVDNFKAVKDPNTGSYSISFQQ
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Cp4.1LG11g08210 vs. ExPASy TrEMBL
Match: A0A0A0LJ51 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G036720 PE=4 SV=1)

HSP 1 Score: 439 bits (1130), Expect = 2.18e-154
Identity = 234/263 (88.97%), Postives = 247/263 (93.92%), Query Frame = 0


Query: 1   MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60
           MVRIEMEE  DEVPSPPK S+S + T DSS VPSTS+ASK PSDGYETASDGELGDS DE
Sbjct: 1   MVRIEMEEPHDEVPSPPKPSSSVKTTTDSSSVPSTSNASKNPSDGYETASDGELGDSADE 60

Query: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI 120
            Q++P+QH E EE+IA LSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI EYDRALNI
Sbjct: 61  CQENPDQHSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAISEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180
           APD+P+AVEL+SICHANRGVCFLKLEKY +TIKACSKAIE+NPAYVKALSRRGEAHEKLE
Sbjct: 121 APDVPAAVELQSICHANRGVCFLKLEKYADTIKACSKAIELNPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEAI+DMKKILELDSSNDQAKK IRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQQ 263
           MSVDNFKAVKDPNTGSYSISFQQ
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Cp4.1LG11g08210 vs. ExPASy TrEMBL
Match: A0A6J1DGP0 (tetratricopeptide repeat protein 1 OS=Momordica charantia OX=3673 GN=LOC111020892 PE=4 SV=1)

HSP 1 Score: 436 bits (1121), Expect = 5.11e-153
Identity = 229/263 (87.07%), Postives = 250/263 (95.06%), Query Frame = 0


Query: 1   MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60
           MVRIEMEE+ED VPSPPKASAST KTMDSSG  STS+A+K+PSDG+ETASDGELGDSGDE
Sbjct: 1   MVRIEMEETEDAVPSPPKASASTTKTMDSSGGASTSNATKDPSDGFETASDGELGDSGDE 60

Query: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI 120
            Q+HP+QHP+ EE+I  L+EDEIKEKALAEAN+AKLAGNKLFGEGKYEEAI+EYDRAL I
Sbjct: 61  RQEHPDQHPQEEEKIPELTEDEIKEKALAEANSAKLAGNKLFGEGKYEEAILEYDRALQI 120

Query: 121 APDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180
           APDMPSAVELRSICH NRGVCFLKLEKY++TIK C+KAIE+NPAY+KALSRRGEAHEKLE
Sbjct: 121 APDMPSAVELRSICHGNRGVCFLKLEKYNDTIKECTKAIELNPAYIKALSRRGEAHEKLE 180

Query: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           +FEEAIHDMKKILELDSSN QA+KAI RLEPLAEQKREKMKEEMIGKLKD+GNSLLGRFG
Sbjct: 181 NFEEAIHDMKKILELDSSNVQARKAICRLEPLAEQKREKMKEEMIGKLKDVGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQQ 263
           MSVDNFKAVKDPNTGSYSISFQ+
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQR 263

[Close]

BLAST of Cp4.1LG11g08210 vs. ExPASy TrEMBL
Match: A0A5A7TIE6 (Tetratricopeptide repeat protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00140 PE=4 SV=1)

HSP 1 Score: 431 bits (1108), Expect = 4.88e-151
Identity = 229/263 (87.07%), Postives = 245/263 (93.16%), Query Frame = 0


Query: 1   MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60
           MVRIEMEE +DEVP+PP  SAS + T DSS  PSTS+ASK PSDGYETASDGELGDS DE
Sbjct: 1   MVRIEMEEHQDEVPNPPNPSASAKTTTDSSSGPSTSNASKNPSDGYETASDGELGDSADE 60

Query: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI 120
            Q++P+QH E EE+IA +SEDEIKEKALAEANNAKLAGNKLFGEGKYEEAI EYDRALNI
Sbjct: 61  CQENPDQHSEQEERIATISEDEIKEKALAEANNAKLAGNKLFGEGKYEEAISEYDRALNI 120

Query: 121 APDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180
           APD+P AVEL+SIC+ANRG CFLKLEKYD+TIKACSKAIE+NPAYVKALSRRGEAHEKLE
Sbjct: 121 APDVPVAVELQSICNANRGACFLKLEKYDDTIKACSKAIELNPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEAI+DMKKILELDSSNDQAKK IRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQQ 263
           MSVDNFKAVKDPNTGSYSISFQ+
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQR 263

[Close]

BLAST of Cp4.1LG11g08210 vs. TAIR 10
Match: AT4G30480.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 282.3 bits (721), Expect = 3.9e-76
Identity = 167/283 (59.01%), Postives = 200/283 (70.67%), Query Frame = 0


Query: 1   MVRIEMEESEDEV----PSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGD 60
           MV IE  ESEDE+       P +S+S Q T        T     + SDG+ETAS+ E+ D
Sbjct: 1   MVLIESSESEDEILIKNEPKPASSSSPQPT-------ETKQVDGDDSDGFETASEREISD 60

Query: 61  -SGDE---------NQQHPEQHPEHEEQIAALSEDEI-------KEKALAEANNAKLAGN 120
             G+E         +Q+ P+   + EEQI  +SE E        KEKALAEAN AK  GN
Sbjct: 61  EEGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGN 120

Query: 121 KLFGEGKYEEAIMEYDRALNIAPDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAI 180
           KLF  G YEEA+ +Y  AL +  ++P ++ELRSIC+ NRGVCFLKL K +ETIK C+KA+
Sbjct: 121 KLFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGVCFLKLGKCEETIKECTKAL 180

Query: 181 EINPAYVKALSRRGEAHEKLEHFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREK 240
           E+NP Y KAL RR EAHEKLEHFE+A+ D+KKILELD SNDQA+K IRRLEPLA +KREK
Sbjct: 181 ELNPTYNKALVRRAEAHEKLEHFEDAVTDLKKILELDPSNDQARKGIRRLEPLAAEKREK 240

Query: 241 MKEEMIGKLKDMGNSLLGRFGMSVDNFKAVKDPNTGSYSISFQ 263
           MKEE I KLK+MGNS+LGRFGMSVDNFKAVKDPNTGSYS+SFQ
Sbjct: 241 MKEEAITKLKEMGNSILGRFGMSVDNFKAVKDPNTGSYSLSFQ 276

[Close]

BLAST of Cp4.1LG11g08210 vs. TAIR 10
Match: AT4G30480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 1.0e-39
Identity = 103/207 (49.76%), Postives = 130/207 (62.80%), Query Frame = 0


Query: 1   MVRIEMEESEDEV----PSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGD 60
           MV IE  ESEDE+       P +S+S Q T        T     + SDG+ETAS+ E+ D
Sbjct: 1   MVLIESSESEDEILIKNEPKPASSSSPQPT-------ETKQVDGDDSDGFETASEREISD 60

Query: 61  -SGDE---------NQQHPEQHPEHEEQIAALSEDEI-------KEKALAEANNAKLAGN 120
             G+E         +Q+ P+   + EEQI  +SE E        KEKALAEAN AK  GN
Sbjct: 61  EEGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGN 120

Query: 121 KLFGEGKYEEAIMEYDRALNIAPDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAI 180
           KLF  G YEEA+ +Y  AL +  ++P ++ELRSIC+ NRGVCFLKL K +ETIK C+KA+
Sbjct: 121 KLFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGVCFLKLGKCEETIKECTKAL 180

Query: 181 EINPAYVKALSRRGEAHEKLEHFEEAI 187
           E+NP Y KAL RR EAHEKLEHFE+A+
Sbjct: 181 ELNPTYNKALVRRAEAHEKLEHFEDAV 200

[Close]

BLAST of Cp4.1LG11g08210 vs. TAIR 10
Match: AT4G30480.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-22
Identity = 75/166 (45.18%), Postives = 96/166 (57.83%), Query Frame = 0


Query: 1   MVRIEMEESEDEV----PSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGD 60
           MV IE  ESEDE+       P +S+S Q T        T     + SDG+ETAS+ E+ D
Sbjct: 1   MVLIESSESEDEILIKNEPKPASSSSPQPT-------ETKQVDGDDSDGFETASEREISD 60

Query: 61  -SGDE---------NQQHPEQHPEHEEQIAALSEDEI-------KEKALAEANNAKLAGN 120
             G+E         +Q+ P+   + EEQI  +SE E        KEKALAEAN AK  GN
Sbjct: 61  EEGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGN 120

Query: 121 KLFGEGKYEEAIMEYDRALNIAPDMPSAVELRSICHANRGVCFLKL 146
           KLF  G YEEA+ +Y  AL +  ++P ++ELRSIC+ NRGVCFLKL
Sbjct: 121 KLFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGVCFLKL 159

[Close]

BLAST of Cp4.1LG11g08210 vs. TAIR 10
Match: AT3G25230.1 (rotamase FKBP 1 )

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-13
Identity = 54/163 (33.13%), Postives = 79/163 (48.47%), Query Frame = 0


Query: 79  SEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI--------APDMPSAVEL 138
           S D   E+ +  A+  K  GN  F  GKY  A   Y++A+            +   A  L
Sbjct: 388 SWDMNTEEKIEAASKKKEEGNSKFKGGKYSLASKRYEKAVKFIEYDTSFSEEEKKQAKAL 447

Query: 139 RSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLEHFEEAIHDMK 198
           +  C+ N   C LKL+ Y +  K C+K +E+    VKAL RR +A+ +L   + A  D+K
Sbjct: 448 KVACNLNDAACKLKLKDYKQAEKLCTKVLELESTNVKALYRRAQAYMELSDLDLAEFDVK 507

Query: 199 KILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGN 234
           K LE+D +N + K   +RL       +EKMKE    + K  GN
Sbjct: 508 KALEIDPNNREVKLEQKRL-------KEKMKEFNKKEAKFYGN 543

[Close]

BLAST of Cp4.1LG11g08210 vs. TAIR 10
Match: AT3G25230.2 (rotamase FKBP 1 )

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-13
Identity = 54/163 (33.13%), Postives = 79/163 (48.47%), Query Frame = 0


Query: 79  SEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI--------APDMPSAVEL 138
           S D   E+ +  A+  K  GN  F  GKY  A   Y++A+            +   A  L
Sbjct: 388 SWDMNTEEKIEAASKKKEEGNSKFKGGKYSLASKRYEKAVKFIEYDTSFSEEEKKQAKAL 447

Query: 139 RSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLEHFEEAIHDMK 198
           +  C+ N   C LKL+ Y +  K C+K +E+    VKAL RR +A+ +L   + A  D+K
Sbjct: 448 KVACNLNDAACKLKLKDYKQAEKLCTKVLELESTNVKALYRRAQAYMELSDLDLAEFDVK 507

Query: 199 KILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGN 234
           K LE+D +N + K   +RL       +EKMKE    + K  GN
Sbjct: 508 KALEIDPNNREVKLEQKRL-------KEKMKEFNKKEAKFYGN 543

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g08210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3ZBR5	6.3e-31	36.19	Tetratricopeptide repeat protein 1 OS=Bos taurus OX=9913 GN=TTC1 PE=2 SV=1	[more]
Q91Z38	8.3e-31	37.72	Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1	[more]
Q99614	1.1e-30	36.36	Tetratricopeptide repeat protein 1 OS=Homo sapiens OX=9606 GN=TTC1 PE=1 SV=1	[more]
Q9CZW5	1.3e-15	36.84	Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 P...	[more]
Q75Q39	1.3e-15	36.18	Mitochondrial import receptor subunit TOM70 OS=Rattus norvegicus OX=10116 GN=Tom...	[more]

BLAST of Cp4.1LG11g08210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522143.1	2.53e-176	100.00	tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo] >XP_0235473...	[more]
XP_022999753.1	1.40e-173	98.48	tetratricopeptide repeat protein 1 [Cucurbita maxima]	[more]
XP_022946519.1	2.00e-173	98.48	tetratricopeptide repeat protein 1 [Cucurbita moschata]	[more]
KAG7030071.1	1.35e-171	97.34	Tetratricopeptide repeat protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6599130.1	3.59e-168	97.29	Tetratricopeptide repeat protein 1, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of Cp4.1LG11g08210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KKL8	6.80e-174	98.48	tetratricopeptide repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494007 P...	[more]
A0A6J1G423	9.66e-174	98.48	tetratricopeptide repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111450555...	[more]
A0A0A0LJ51	2.18e-154	88.97	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G036720 ...	[more]
A0A6J1DGP0	5.11e-153	87.07	tetratricopeptide repeat protein 1 OS=Momordica charantia OX=3673 GN=LOC11102089...	[more]
A0A5A7TIE6	4.88e-151	87.07	Tetratricopeptide repeat protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of Cp4.1LG11g08210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30480.2	3.9e-76	59.01	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30480.1	1.0e-39	49.76	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30480.3	1.9e-22	45.18	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G25230.1	2.7e-13	33.13	rotamase FKBP 1	[more]
AT3G25230.2	2.7e-13	33.13	rotamase FKBP 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 166..199 e-value: 5.3E-4 score: 29.3 coord: 91..124 e-value: 15.0 score: 13.5 coord: 132..165 e-value: 9.9E-7 score: 38.4
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 102..123 e-value: 0.069 score: 13.4
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 132..165 score: 8.7914
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 91..124 score: 9.5584
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 166..199 score: 9.7354
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 49..227 e-value: 9.9E-44 score: 150.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 90..219
IPR001440	Tetratricopeptide repeat 1	PFAM	PF00515	TPR_1	coord: 134..164 e-value: 2.8E-9 score: 36.4
IPR013105	Tetratricopeptide repeat 2	PFAM	PF07719	TPR_2	coord: 167..198 e-value: 1.5E-5 score: 24.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..44
None	No IPR available	PANTHER	PTHR46014	TETRATRICOPEPTIDE REPEAT PROTEIN 1	coord: 36..263
None	No IPR available	PANTHER	PTHR46014:SF1	TETRATRICOPEPTIDE REPEAT PROTEIN 1	coord: 36..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g08210.1	Cp4.1LG11g08210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity