
Cp4.1LG11g03120 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGACATTTGTTGGAAAATGGGATTGAGGTTGGGGCTGGTTTGGGCCACCGACGGTGACATTATCATCAGAATTCCCCCCCTATGCCTACATGAATGGTCAGGACTCTCACAAGAACCCCAAACAGAGAAATAAAAAATTAAGAAAAAAAGACTGATGGGGCTTGCGGAAGGAGGCATGTGGATGAGTGGGGGACACACCAAACTCATCACTTTTATACAAAAAACCCTTCCTTTCAAATAATTGTCACACTTTGGTGAAGAACAACACCAAGAACAGGAAGAACAGGAGGAGGAACAGGAAGAAGAACAGGGAATCAATCAATCTTTAGTACCATTTTCTCGCTTTTCTTCTGCATTTTTGTTGGGGGATCTTCTGTGTTGTTGTGTTGAAGATATGCCAAGACCAGGTCCAAGGCCTTATGAGTGTGTTAGAAGGGCTTGGCACAGCGATAGGCACCAACCCATCAGAGGTTCTCTGATTCAAGAGATTTTCAGGTCTGCTCTGGTTACCTTCTTCCTCTTCTTCTCATCATTTTTGCTTGAATCTCTCTGTTGGGTTGTTTCTGATCTGTGTATGTTAGGGTTGTGCATGAGATTCATAATTCCTCCACTAAGAAGAACAAAGAATGGCAAGAAATCCTTCCTGTTGTTGTTCTCAAAACTGAAGAAATTTTGTACTCCAAAGCCACTAATGAGGTCTTCTCCTTCTCTATTACCCTCTTTAGTCCATGATCTTTGCTTAACCTTACTTTTCCCCTCCTTGGATAGGCTGAATATATGGATTTTAGTACACTTCGGGACCGCTTAATGGACGCCATTAATACCATTATACGCCTTGATGAGACTACAGAAACTGGAGACTTCCTTCACCCATGCATTGAAGGTACTTGAAATGTTCCTTCTTTGGTCCCCCTTTGAATCCTCTTTTTTGGGGCTTTGTTTTGATCCCCCTTCTGTTGAATTTCATTTCCCTTTCAGCTGCTCTTAATTTAGGCTGCACACCCATAAAAGCTTCAAGGAGCCAACGCAATAATATCTCTACAAACTATCTTAGTTTTAGGAATCAGGACTCTCCCACCTTGTCTCCTCCACCAATGACGGTGAGGAATTCTCCTTGTGTCCCTTACTTTTGGAGTTTGGCTAAGCCTATGCCCAATGATTTAGGCCATTCAGGGTTCAGATGCCAATGCCTTCTACCTCCTGCTCATACTTCCACCTCTCCAAAGTTCCCTGCTTTGTTAACTCCATATGGTTTGATGGAAAATGCTCTTCCATCCAGCAAATTCTCTGTTTATCCGCTATATTATGGAAATGGTGTTCGGGAACGACAACATTCTGGTATCGAAATCGCTCCGATTTCTACGCCTATTATGGAGAAAACTAGTGCCTCTGGAAGCCCATGTGATGATAAATGTGATCTAGCATTGCGGTTGGGTCCTCTCACAGCGTCAAGCTCGAGGAGCTATGGAAACAAAACTCCGCTTCGTGTTCTTGGTTCGGGTAGTTCATCGGAGGATTGTTCCCCAGTGATGGAAAGGAAGGTTCCCTTGATTCCAATGGTAAATTCATATGGCTTATCTGAACACAATACATTCGGGCGCAATCTTGAAGATGAATGTTTCGATGCAGAAACGAGGATGAGAAAACGAAAGGCAGATTGTAGTCATTCATTGAATTGGCTCCCAAAGCTTCCTTCCAGTAGGTTCATAGGGTGAATGTTAAGAAACAACAGAATTATAGACGAAAGAAAGGTCGAACGGACGAGTTCCTCAGACACAAATCGTCCCGGAGCGGACGAGTTCATCTAAAGAAGCAACTGGGTGAGGTTACTGTCTGTGGAAATGGGGGACAGAGAGGCATTGAGGCAACAAGCTGATATATCATATGCTTTGGTTCTGTGGGTCCTTTTGTTTTTTTTTTTTTTCCTTTTGCTTTATCATCTTTGTTCTTTTTGGGAAAGGGCTGAATGAATTGATCATTGAATGTCTGGATGGAAGTCTCTGCGTTCAACTTTTAATGAGTGGTGACATTAGTTCTCTGTGGGGTCTCATATACATAATTCTTGTTTTATCCATTGTTAAGGTACACAAAGCTTGCTGCTTTTGGTTAAACTTGCCTTTTCATATCAGGAAGTTGCTTTGAGAAACAGAGATTCAAACACATTTCATCAACATGATGATGCTATGAGTCATTTTCCATTACATGCCTCATTCTTCCCCTTTCCCACCCGTCGTTA GGACATTTGTTGGAAAATGGGATTGAGGTTGGGGCTGGTTTGGGCCACCGACGGTGACATTATCATCAGAATTCCCCCCCTATGCCTACATGAATGGTCAGGACTCTCACAAGAACCCCAAACAGAGAAATAAAAAATTAAGAAAAAAAGACTGATGGGGCTTGCGGAAGGAGGCATGTGGATGAGTGGGGGACACACCAAACTCATCACTTTTATACAAAAAACCCTTCCTTTCAAATAATTGTCACACTTTGGTGAAGAACAACACCAAGAACAGGAAGAACAGGAGGAGGAACAGGAAGAAGAACAGGGAATCAATCAATCTTTAGTACCATTTTCTCGCTTTTCTTCTGCATTTTTGTTGGGGGATCTTCTGTGTTGTTGTGTTGAAGATATGCCAAGACCAGGTCCAAGGCCTTATGAGTGTGTTAGAAGGGCTTGGCACAGCGATAGGCACCAACCCATCAGAGGTTCTCTGATTCAAGAGATTTTCAGGGTTGTGCATGAGATTCATAATTCCTCCACTAAGAAGAACAAAGAATGGCAAGAAATCCTTCCTGTTGTTGTTCTCAAAACTGAAGAAATTTTGTACTCCAAAGCCACTAATGAGGCTGAATATATGGATTTTAGTACACTTCGGGACCGCTTAATGGACGCCATTAATACCATTATACGCCTTGATGAGACTACAGAAACTGGAGACTTCCTTCACCCATGCATTGAAGCTGCTCTTAATTTAGGCTGCACACCCATAAAAGCTTCAAGGAGCCAACGCAATAATATCTCTACAAACTATCTTAGTTTTAGGAATCAGGACTCTCCCACCTTGTCTCCTCCACCAATGACGGTGAGGAATTCTCCTTGTGTCCCTTACTTTTGGAGTTTGGCTAAGCCTATGCCCAATGATTTAGGCCATTCAGGGTTCAGATGCCAATGCCTTCTACCTCCTGCTCATACTTCCACCTCTCCAAAGTTCCCTGCTTTGTTAACTCCATATGGTTTGATGGAAAATGCTCTTCCATCCAGCAAATTCTCTGTTTATCCGCTATATTATGGAAATGGTGTTCGGGAACGACAACATTCTGGTATCGAAATCGCTCCGATTTCTACGCCTATTATGGAGAAAACTAGTGCCTCTGGAAGCCCATGTGATGATAAATGTGATCTAGCATTGCGGTTGGGTCCTCTCACAGCGTCAAGCTCGAGGAGCTATGGAAACAAAACTCCGCTTCGTGTTCTTGGTTCGGGTAGTTCATCGGAGGATTGTTCCCCAGTGATGGAAAGGAAGGTTCCCTTGATTCCAATGGTAAATTCATATGGCTTATCTGAACACAATACATTCGGGCGCAATCTTGAAGATGAATGTTTCGATGCAGAAACGAGGATGAGAAAACGAAAGGCAGATTGTAGTCATTCATTGAATTGGCTCCCAAAGCTTCCTTCCAGTAGGTTCATAGGGTGAATGTTAAGAAACAACAGAATTATAGACGAAAGAAAGGTCGAACGGACGAGTTCCTCAGACACAAATCGTCCCGGAGCGGACGAGTTCATCTAAAGAAGCAACTGGGTGAGGTTACTGTCTGTGGAAATGGGGGACAGAGAGGCATTGAGGCAACAAGCTGATATATCATATGCTTTGGTTCTGTGGGTCCTTTTGTTTTTTTTTTTTTTCCTTTTGCTTTATCATCTTTGTTCTTTTTGGGAAAGGGCTGAATGAATTGATCATTGAATGTCTGGATGGAAGTCTCTGCGTTCAACTTTTAATGAGTGGTGACATTAGTTCTCTGTGGGGTCTCATATACATAATTCTTGTTTTATCCATTGTTAAGGTACACAAAGCTTGCTGCTTTTGGTTAAACTTGCCTTTTCATATCAGGAAGTTGCTTTGAGAAACAGAGATTCAAACACATTTCATCAACATGATGATGCTATGAGTCATTTTCCATTACATGCCTCATTCTTCCCCTTTCCCACCCGTCGTTA ATGCCAAGACCAGGTCCAAGGCCTTATGAGTGTGTTAGAAGGGCTTGGCACAGCGATAGGCACCAACCCATCAGAGGTTCTCTGATTCAAGAGATTTTCAGGGTTGTGCATGAGATTCATAATTCCTCCACTAAGAAGAACAAAGAATGGCAAGAAATCCTTCCTGTTGTTGTTCTCAAAACTGAAGAAATTTTGTACTCCAAAGCCACTAATGAGGCTGAATATATGGATTTTAGTACACTTCGGGACCGCTTAATGGACGCCATTAATACCATTATACGCCTTGATGAGACTACAGAAACTGGAGACTTCCTTCACCCATGCATTGAAGCTGCTCTTAATTTAGGCTGCACACCCATAAAAGCTTCAAGGAGCCAACGCAATAATATCTCTACAAACTATCTTAGTTTTAGGAATCAGGACTCTCCCACCTTGTCTCCTCCACCAATGACGGTGAGGAATTCTCCTTGTGTCCCTTACTTTTGGAGTTTGGCTAAGCCTATGCCCAATGATTTAGGCCATTCAGGGTTCAGATGCCAATGCCTTCTACCTCCTGCTCATACTTCCACCTCTCCAAAGTTCCCTGCTTTGTTAACTCCATATGGTTTGATGGAAAATGCTCTTCCATCCAGCAAATTCTCTGTTTATCCGCTATATTATGGAAATGGTGTTCGGGAACGACAACATTCTGGTATCGAAATCGCTCCGATTTCTACGCCTATTATGGAGAAAACTAGTGCCTCTGGAAGCCCATGTGATGATAAATGTGATCTAGCATTGCGGTTGGGTCCTCTCACAGCGTCAAGCTCGAGGAGCTATGGAAACAAAACTCCGCTTCGTGTTCTTGGTTCGGGTAGTTCATCGGAGGATTGTTCCCCAGTGATGGAAAGGAAGGTTCCCTTGATTCCAATGGTAAATTCATATGGCTTATCTGAACACAATACATTCGGGCGCAATCTTGAAGATGAATGTTTCGATGCAGAAACGAGGATGAGAAAACGAAAGGCAGATTGTAGTCATTCATTGAATTGGCTCCCAAAGCTTCCTTCCAGTAGGTTCATAGGGTGA MPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRVVHEIHNSSTKKNKEWQEILPVVVLKTEEILYSKATNEAEYMDFSTLRDRLMDAINTIIRLDETTETGDFLHPCIEAALNLGCTPIKASRSQRNNISTNYLSFRNQDSPTLSPPPMTVRNSPCVPYFWSLAKPMPNDLGHSGFRCQCLLPPAHTSTSPKFPALLTPYGLMENALPSSKFSVYPLYYGNGVRERQHSGIEIAPISTPIMEKTSASGSPCDDKCDLALRLGPLTASSSRSYGNKTPLRVLGSGSSSEDCSPVMERKVPLIPMVNSYGLSEHNTFGRNLEDECFDAETRMRKRKADCSHSLNWLPKLPSSRFIG Homology
BLAST of Cp4.1LG11g03120 vs. NCBI nr
Match: XP_023545621.1 (uncharacterized protein LOC111804997 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 731 bits (1887), Expect = 2.32e-266 Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g03120 vs. NCBI nr
Match: KAG6598567.1 (hypothetical protein SDJN03_08345, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 716 bits (1848), Expect = 2.05e-260 Identity = 346/355 (97.46%), Postives = 351/355 (98.87%), Query Frame = 0
BLAST of Cp4.1LG11g03120 vs. NCBI nr
Match: XP_022962169.1 (uncharacterized protein LOC111462703 [Cucurbita moschata]) HSP 1 Score: 715 bits (1846), Expect = 4.13e-260 Identity = 346/355 (97.46%), Postives = 350/355 (98.59%), Query Frame = 0
BLAST of Cp4.1LG11g03120 vs. NCBI nr
Match: KAG7029506.1 (hypothetical protein SDJN02_07845 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 710 bits (1833), Expect = 3.96e-258 Identity = 343/355 (96.62%), Postives = 348/355 (98.03%), Query Frame = 0
BLAST of Cp4.1LG11g03120 vs. NCBI nr
Match: XP_022996566.1 (uncharacterized protein LOC111491770 [Cucurbita maxima]) HSP 1 Score: 685 bits (1767), Expect = 4.22e-248 Identity = 337/355 (94.93%), Postives = 344/355 (96.90%), Query Frame = 0
BLAST of Cp4.1LG11g03120 vs. ExPASy TrEMBL
Match: A0A6J1HG78 (uncharacterized protein LOC111462703 OS=Cucurbita moschata OX=3662 GN=LOC111462703 PE=4 SV=1) HSP 1 Score: 715 bits (1846), Expect = 2.00e-260 Identity = 346/355 (97.46%), Postives = 350/355 (98.59%), Query Frame = 0
BLAST of Cp4.1LG11g03120 vs. ExPASy TrEMBL
Match: A0A6J1K555 (uncharacterized protein LOC111491770 OS=Cucurbita maxima OX=3661 GN=LOC111491770 PE=4 SV=1) HSP 1 Score: 685 bits (1767), Expect = 2.04e-248 Identity = 337/355 (94.93%), Postives = 344/355 (96.90%), Query Frame = 0
BLAST of Cp4.1LG11g03120 vs. ExPASy TrEMBL
Match: A0A6J1BQE5 (uncharacterized protein LOC111004848 OS=Momordica charantia OX=3673 GN=LOC111004848 PE=4 SV=1) HSP 1 Score: 474 bits (1221), Expect = 1.25e-164 Identity = 262/401 (65.34%), Postives = 300/401 (74.81%), Query Frame = 0
BLAST of Cp4.1LG11g03120 vs. ExPASy TrEMBL
Match: A0A5A7VCK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002380 PE=4 SV=1) HSP 1 Score: 466 bits (1198), Expect = 3.65e-161 Identity = 262/395 (66.33%), Postives = 294/395 (74.43%), Query Frame = 0
BLAST of Cp4.1LG11g03120 vs. ExPASy TrEMBL
Match: A0A1S3BC56 (uncharacterized protein LOC103488315 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488315 PE=4 SV=1) HSP 1 Score: 466 bits (1198), Expect = 3.65e-161 Identity = 262/395 (66.33%), Postives = 294/395 (74.43%), Query Frame = 0
BLAST of Cp4.1LG11g03120 vs. TAIR 10
Match: AT4G32295.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24150.1); Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 228.0 bits (580), Expect = 1.2e-59 Identity = 140/274 (51.09%), Postives = 159/274 (58.03%), Query Frame = 0
BLAST of Cp4.1LG11g03120 vs. TAIR 10
Match: AT3G24150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32295.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 209.9 bits (533), Expect = 3.3e-54 Identity = 128/297 (43.10%), Postives = 168/297 (56.57%), Query Frame = 0
BLAST of Cp4.1LG11g03120 vs. TAIR 10
Match: AT4G32295.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24150.1); Has 34 Blast hits to 34 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 117.1 bits (292), Expect = 2.9e-26 Identity = 89/210 (42.38%), Postives = 101/210 (48.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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