Cp4.1LG10g12470 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g12470
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CDK5RAP3-like protein isoform X1
Location	Cp4.1LG10: 9625601 .. 9635841 (-)
RNA-Seq Expression	Cp4.1LG10g12470
Synteny	Cp4.1LG10g12470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGGAAAAATTGCCTCTCCCTCGATCCTGAACAAAACTCTTACACACCCTAAGCAACGATTTCTTAGTGCAAAAAGAACTATGGCTGCCGACGATATTCGGAATCTTCCAATTGACATCACATTCTCTCGTCTTGGTGGTATCAAATCCACTTACAATCTCCGATTCTTGTTCGATTAGTGATTTTGATTTCGTTACATACTTCGTTTATTGTTTGTTTGAATTGTGCTTGTTTTTTTTCAACAATTTGATTGGGGTTGATTTTTGCACCTTCGTGGGAGTGAAGAGTGGCTTGTCGATCGGAAAAGAGTCCCTGCTGATTGGCGTAAGCGTTTGGCAGCGTTGAGAGTTCGCATCTCCAAGGAGTTCTTGTCTCTTCCCAAAGATACCGATCCCTATTTCCATACCTTAGGCCATGAAGGTTAGATTTGATTTTTTCAAGTTTTCTGCGGAATTATTATGTTTAATCTACTGGCATTAAGTGAAGTCTAGTCTGAATAAAATTTGATTAACAAAAGACAGAGGGAGAGAGAGTTCCTTTTTATCACTAGTTCTGCAATTGACGGGAGTGGAACCTTTAATTGACGCTGCTGCAAAGCTAAGAAACAAACTTCCATTTTAGTAAAAAACGAGCACTAACCTAAGATATTAAATTCTATGGGTTCCTCGATAACTTGTCATTTCTATGGGTTGCTTGATAACTTGTCTTGTGAGATTAGTCGTAAGCCGGCTGGCTTGTACATTCATGAATGGAAAAACTAAATTGGGGAGGGGTGGCGTCTTCTCAAGCAATGGCCAAACTAGGATTAAAAATCATTCTCCTATATCTTTTCTACCAGTAGGGTGATAAAAGAAATTAGCGTATAGTCGTAGGATAGGCAGGGAGTATTTGGTAAGATATCAACTGGTGTGGGGTTCACTGAAAAAGTCACATTTGAGAAAGAGTGTGACATTAATAGTATTTTAGTTGGAATTGTATTGAGAGATAGGTACTCTTTTGATTACCAGGGGCATTATGTAACAACTCACTTTTCAAGCCTTCGAATCACGGATTGCCACGTGGACTCAAGTGTAAAAAGGGCGATAAACTTTTTCAATTCTGAAAAAAATGGGGAACATGAAGAATTCGAAGTCAAACATAAGCAGGAATTTTGATATAAAAAGTATTTAAGAGTACAAAATCACTTCCACGGAGTTGCATCAAAATAGTTTTCAAAATGACTCAAGTTTCAAGATGGTGTTTAAGAATAACATTAAAATGTCAAAAGAGGAAAAACAACTTGATCTAGGGGACCTCTCTGTAGTTGCACGGCTCCGTAGGCTCCTGCTAGCAATCGAGGTCTCCACTCCATTTGTAAACAAAGAATAGTAGGAATGAGTATAAAAATACTCAATGAGCACCTACTTGTAGGGTCTCATTGAAACTTCTCCTATTCAATGCTTCTTAAGCTATGTGCTCCGTCAGAATCCTACAGTCGGCTAATTCCATGGCTTGGGTTCATTTCTAGCCTTCCCAATCTCTTAAGGTTCATATACCCTACTTACTCCTATTCCAAGAATGTAAGCTACCCATCGGGGTATATTTAGGTTTCAGGATGCTCTTAACCTCTCATTTCCTACTTTCCAAGGTCCATATAGTCATTGTGCTTCTTGCGCATAAGTCAGGGTGCCCTCGTATGTCTCAAGCTCAAGGAAAGTCTAACAGTTATGGAGGAGCCATCGCTCGCTCTAGGTGACCTCTCAATCTACCTACATCTCCATACGCGCCTACTACTAAGTGCTAGCTGGAAACTCCCCAAATGGCATATGAAAATGCTCCCTATTCCTACGTCATTCTAGGCTAGAACAATGCAACGCCTACTCTCCACTAGGTACAATCGGATCTCTCTTAGTAGTAAATAAGCGCTAGTCGGAAGCTACCATAATGGTACCAACGATGCTCCTTATTCCTATGCCATTCTAGGCTAGAATAGTGCAAAATTGGCATCCACTAGGTACAACCAGAGCTCCTTCAGTAGTACCCTCTAGTGTGCCATGGGCTCTAAGTGGGTGACATTGCGTTCCTAACACGCTTCTAAGGGTATAAATGACATGAAATCAGAAATCATACATATCTGCACAACTCCATGCATATCAGGTACAATAAGATATAACATGCCATAGTCCTAACAAAGCATTTAAATAAATTAGTGTCATCGGTTACATGGTGGAAGTCCTAAACGTGCATATCGAGCTAAACCAACATAAATCCATCATCCAGGGTTTAACTAATCCATTTCCATGCTCAAATTATCCCTAAATCATGCTAATAATTCATATACCCAAGTCCTAGTCCATCCCTACAAATATTTGTTTAAAAATTCAAACGGCGACTTATTTGGTTGTTAACTTCCTGGGCTCAATTCGAGTCTTCAGAAAATTCTAAATTTCCTTAAGTTCCTCCAATATGGCCTACATTAAATCAAAAGAATAAAACTAGTCACAAAAGCTTGAAGAACGAACTCCTAGAGGCTTAAAAGCTATACAAAGAGTAATGAAGTTAAAGAAACTGACAGTTGACCATACGGTCACTCTGACATTATGCTGACCCTCTACTGACACATGGCTGACGTTACTGATCCCTCTTTTTTCCCCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTCCCCTTTTATGGTACAAATCGAGATATTACACATTAGAAACAGGTGAGTTAGGGCAGTGTACTTCTCTATTGAATAAATACAGAGGTTCTATCATAATTCTATTAACATCTCTAAATTCTAATTGATGTAATCTCTCTATCTTGTGCATCAAATGTCCCTTGTTATTCAGTTCGTTTACTTATGAGTCATAGTTTATATCTCATCAATAACTTTTACACTGGTTGTATGGGATTTTTTTTCTCTCTCAGATATTGGTTATTTAGAGGCAAAAAAAATATATAATATTCTTCTAGAGTCAACCTCAGAAACCCGGAATATATTTGGCCGGCTATCAGGTGCTGCTGTAAGACTTGTCTTTTCCTGCTCTTTTCTCAGCCTTCACTGTACATTGGCAGGCTTGAATTAATGTAGAGCTTTAGTCCGTTTGTTTTCTAAATAAGAAATATTTTGTCAGGGTGCTTGGGAGGTGATTGTACGAACTTATGAGAAGGATCATATTTTTCTTGGCGAGGCAGCTCAAATAATTGTTCAGAATGTGACTTATGAAATGTAAATGTCTTGTTATGAACTTTGTGTAGTAACTGATGGATATCGAAGAGCTCAATTTTCATGCTACTATTACTTTTAATGTGAAGCCCATATCAGAAGAAACAGGTCCAAAAGATTCATCAACAGCTTGCTGAGCTGGAACGTAAAGAATCTGATACTAAAAGAAATGCTTCTCTTTCGGCAGCTAGATATGTAGAGGCTTGTCAGGACCTCGGTTTGCAGGTTGTAACCTACTCTGTATATTTCCAAGCTTTAGGAGACTCTTTTTGTATCTTCCTTTTATTGCGTGGATTTATTTTTTGTTGAAGTCAAGCTTCTTCATCTTCTTCCTCTTGCAGGGAAAAAATGTTAGAGATGAACTTCTGGAGACTGCAAGGTCACTTCCAAGCACATTTAGCAGAATATTAGAAGTCATAAATGGTGATTCTGTGTCACGTGCTATTGAATACTATTCCAATTTTGTAAGGGATGCTCACTCGGATAAGGATGTAAGGAAATAGTGCAATAAGCATTGTCTGATCATAAATGTCCAAGAGAGGAATAGAGAAATTTATTTCCTGATACTGATGACTAAATTATTGTGATGTGGAATGTTAATTCTGAGTCTCTAACATTTCATACATGTGTACAGAAACACGTGACTGTATTACCAAACCTGGGGCATATACGTGAGCATCCTCCTTCTTTACATGTGTCTGTGGGCTTTGAGATGGTTGATTCTGTAAATGTTCAGTCAAGCTATATAGAACCAGATGCTATTGGACAAACAGGAATTGCTGCTGATAATATTGACTGGGATATATCCTTGGAAAATACTCAAATTGACTGGGATATAGGTGCACTGGAGGAAACTGAGGATACAGGAAATGGTTTGGGACCTTACGAAATAGTTCATGCGAGTGAAGCTTTGGAATCATCATACCAAATGGAACCTAGTAAAGAGGGTAGTACTACATTGCCAGAGGCTACTGTGTCTGAGATCTCATGGGATGTCAGTGTTGAAACACCTCAAGTTGATATCATCGATGATGTAACCTTGCCTGATATAGAAGTGAATAATAAAACATTCATTCCTTCAACTCATTCTGCAGAAATCACTGAAGTTAGAAGCCAGCTTTTGGAGACCGAGTATAGGAATAAGATTCTTGATGATCTATATGAGGTATATCACATAGCTTTGGTACAAAACTTAAGTGGCATTAAATACCTTATACGAAGGTTTAATGGCTATATCTATTTACAATTTCAGATAAAGGCATTTCTAAGTCAACGTTTGAATGATTTGAAGAATGATGAAACTCTGTCTTTGCAACATCAAGTCCAGGCAGTTTCTCCCTTTGTGCTGCAGCAATATACTCCTGATGCCATTGAGATGATGCTATCAGATGTTTCCATGGCTATATCATTACTGTCAAGTAGGAAAACTCAAGATTTAATTATGATTCTCAATTCTAAAAGGTACTACTGTTACTACATTGGTCATTGTTTTCTTATTTGTTTAATCCACCTCTCGTAGGGATTTTCCAGATTTTGATAAAAAAATTCTTGAGAAATGCCAACAAAATGAAGTTACTGTTACCCGATTTCACCCACCTTTTCAGTAAAAACTAACCCACTTAATTTACTATTCTAAGTTCATATGTATTAGCATTTGCTTTGGTGCTAATATTAACGTTTCTATGTTTTGATGCAATAAGTTATTTTTGCTTTTCATTTGTAACTTTAGTTGATTGATGAACTAGTGCTGGTAGGTTTATAATTCTGTTTGACAAACTTTGCAATTACGATAATCTGCATGTGTACTTTCTAAAACATATCAAAATATGTAATGTGATCCTAGAAACTGTTTGGTTCAAATACTATATGATCTACAGTTAACATGTTTGACCCTTCTAATTATTAGGTTAAACTTCATTTTTGGGTCCTTGTAAGCATTACGTCTAACTCAAAGGTCTTAGTTACATCTCTAGATTTTGAATTCTACTTATTTTTAGTCTTGACGATGAATATTAGTTAGCAATACACAGAAGTAGCACTCTTTACTTTAACTAGTTGTTAAATTGTCACTTCATCCAAATTTCAAGAAATGAGTTCCGCGTTTGCACTTTATCTACTGGTAACGATTATAGGCACTGGTTAAATGTAGTTCAATGTTTAGAGACATAATTGCAAATTTTAACAGTAAGGGACACAATTAATACAATGCTGAATGTCTGTGAAGGAAGTATGTATTCAATATATTTTCTATTTAATTGTCTTGTTGTCGAGAATCAGTATCAAAAACTTGGTTTTGAGTTGATGGCTTTTTCACTTATTGGGAAAAGTACATTTTTGAACCCTGCGATTTGGATCAAGGTTCACATTGGCGTACTTATCATGGGCACTTGACTTCTGTTAGTTTGTTTCATCTGTTAATAGGTCTAATTAATTTATATAATTATTAGTTTGATTATTAATTTGGCTGATTCATTTCATTAAACATTTCTTGATTAATTATGTTAATTGTCAATTTTCGTTCCTAATTTTAATTAATATATTCTTTTATCAGCTAACTTACTAACTCAGGAAGTAATACGACAAAAGTTAATGATAAAAGCAAGTCAAGAGAAGCCAATGTGAAAATATAAGTTCACTTTTTGTTAACGAAATACTCTCTTTTTTATTATGTCAAGAACTTTAGAAGTTCAAATGGTGGATTTATAACCTGAAAGCCAAGTGAAACCATTCTGAACGGGGGACCAATATTATAATTTTCTTCTTAAAATTTTATTTTAGGAGACAAATTCCATATTTCGAAGGACGAAATATTGGATAAAAAGGGGAGGTGGAAAAGAGACGTTCCAACTCAGAGTGAAAGTAGGCTTTCATGAATACTCTCCATTTGATTAATGATACTCTTCTGTTTTTTTGGCGGCTTGAGTTATGGTACATCCCTGCATTCTTTCAATTTTGTTTCAACAAAAGTTCCATACCTACCAAAATAATAATAATAATAATAAATAAATAAATAAAAATAAAAAAACAAGACAGAACAAAACAAAATGAAGGCCAGTTGAAAAACGCTCCTGATAGCTCCTGTAGAGTGATCCAACTCTATTTTATAATTTTTCTCTAAGATTTATTTTTTTCTAAAATTTGATCGTTCTCAGGGAAACTGATGTGAACTTTGATTTCAGATTTCTAGAGAGATTAGTTAGTAAACTAGAGGAAAAGAAGCAGCGTGAAGTGAAGCTGAAGGAAGGGCTGAAGGACTTGTCTGCCAAACGTATGGAGCTTCAAAATTCATTAGCTTCATCTTGGCCAAAACAAGTAAGTTTTTCTTCCTTTTGACTTATTTATTTATTTTATTTTAGTTTTTCTTCCTTTTTTCTTTATTTTTATTTTATTTTAGTTATAAAAATATTATGTTTCAATGATGGAATAAAATATACAAAAGAAGAGGGAAAACCCGCCCCAAAGCTGATGGAAGTTACATAAAAGCCTTCTAGTTGGGCGGATGATAATTTAAACTATAATCTGTAAATGGCGAAAAAAACACTTTCATAAAAAAAAAAATGTTTAGGGTTTAGCTAAATGAAAGTTCTAACAAGTTGTAGCCAAAGTTCTAACAAGCTGCAAAATAGAATTCATTCCCTTTTAATTCCTTGGGTTTCCTGATTGGTGGAAATTATGGGACAGTGGCGGTTTGGTATACATTTGTTGAGAAATTTTGAACTAAAGTTGTCAAATGGAGAGGGGTCTCTCTGAAATGGGGGGCAGTAACCCTTGCCCAAGCAGCTGTGCTGAATGACCTCCCTTGCTATTTCTCTTACCTCATGGGAGCTCCTATGAAGGTGATCAATTGCTTAGAGAGAATTGTCAGAGATTTTATTTGGGATGGTGGTATCTTTAAACCAGGACCGCCTCACCTTGTGGCTTGGAAATGGACTTCGTTGCCCACAATTTACAGTGGCCTTGTGATTGGCTATCTCTATCAACGAAACCAATCCCTCCTAATGAAATGGTCGTGGAGGTTCACTGAGAAGAGGTATTTGCACTATTTATGGGATGGAGCTTATGGGTTGAACTACTGAAACTACCAAAAAGAAAGGGAGACAGCGGCTGAGGTCAAATACCATGAAGGACAAAGACCAGTTTTTCAGTTTTGTGGAGTTTTTGTTGGGGAATGGAAGAAGAATTAATACGTGGAAAGAAAATTGGTGTGGAACAGAGTATTTGGCTATCAAATTTCCTGATATTTATTCCATTACTATAAAGAAAGGGGTCTCCATTGCCGATTGTTGGGATTGTGAGCATCAAGCATGGGACTTGGGTATTAGAAGACCACTTTTTAACTGAGATTTGGGGAACTCGGTCCATCTGATTGCGTTCCTGTATGCTTGGGATGTAGGTAATTACCATGATAGAATAAGGTGGAAGATCAACTCATCGGGTTCTTCTACTGCTAATTCTACCTTTCTGAAGCTAACCAACGGGGAGACAAATTTGACCTACCCAATGGTGAACCTAATCTGGAACTTTAAGGTCCCAAAAAAGGTAAAGTCTTTCTTTGGTCGTTGGCTTGTTGAAGTTTGGGTACCCACGGAAAAGTTTAGAGGATATTCCGAAATTGGCTGATTTCCCCTTCTGTGTATTGTTTATGTTTGCGTGAGGAAGAATCCCTAGACCACTTGTTCCTTCACTGTCCTTTTGCAACTAAAGGGTGGCTTGCGTTATTTAAGAAATTTGGGGTTGAGTCTTGCTTTCCTAAGAACTTCGGGGAAGGTTTGTTGGTGGTATGGGAGAAGTCCTTTGGCGTTGTACAATGCTTTCTCTTCTTTGGGGCTTTGGAGGGAAAGAAACAACAGGGTGTTTGAAGAAGTCCTCTCCTTCTGATTCTTATTGGCTTTTGTAATTACAATCTTTTAATGATTATAAACAATTGGAAGGCTCTCCATTGCTAGGTTTGGTAGAGAGGGGTAATCTCTACTAGGCTGTCTTTTGTTATTCTTTTGATGAATATACGTATTTGTTTCCTATCAAAAAAAACAAGTAGATGGAAGAAAGCAGGCCTCTCATATTGGTTGCAAGAGGGGTCTGCTAGCTGAAGGAAGATAATAAAGAATTCCAAAACCTGTTACCAAGCTGCATGTAAAGAACATATGACCTTCAGTTTCAGATTCCTTCTTACACATCACACCAATTTGGTGAGAGGGTGAGGGAGCAGATGAGTGACGTCTTGATTGTTTATGCTTTTGTGACCAAATTCCCTTAGTAAGAATTTAATACTCTTTTGAGACTTGTATTTCCAAAGTTTTCCTTGGAGGAGTCATGTTCTACTAATGGGGTGTTAGTAAGGGTTTAATGATATAGTTAATTAGAGGTGGTTTGGTTATAAATAGGAGTTAGGATTTATAGAGGGGAGGTCATATTTTGGGAAGTCGATCCATAATGAATGGCGTAAGACTATTTGATATTTTAATTTTAGTTTTGGGTTCCCAACGTCAACCTGGTCTCAGACTCTCGATTAAGATGTCAGAAGTTTGATTTCTCTACTCCATATGTTGAACTAAAAAAACGTTAGGTATCTAGATACAAAAAACACGAGTAACAATGAAATTACAATATCTAATTCCAAAAACAGATATGAGTTTATGTTTTGTTTTGTTCCTTTAATCTTTGTAATGTATAATTTAATGCAAACCCAATTATCTTCTGGCTTCTCTCTACCAAGACTCTATGAAGAATTGTTCTATTTGCTACCCGAGTACCGTGCCTGCTCTCTCGAGGAGAGAATTTAGTGAAATTTTTCACCATAGGGCTTATATACATCCACACGACCCCAAAGGGAGAAAAGGCTTGGTCTGTCTTTTGCCAAGTGAAATTGAAAGCTAAGCCGGGAATTTGTCACTTCTTCCTATAGTACATTTTGAGGCATTTTAGCCCTAGTGGGTGTAGACATGGTTTTGGTGAACAGTCATACACCTCCGTATTAACCCAATGTAAAATGGTAAAAACCTATCTAGGATGAAAGTATGTAAAAGAGGTTTAAAATGGGCATGTGACTATGGACAACACGTCCGGGACAAGCAAGACTGGGACATCTGTCGTGCGGTCATAGACAACACGCCTTGGACAAACATAACCGTGACATCCTCCTCCACTCAATTGGTTGACGTCTTTGTCAACCTACTTGGACAAGTAAGACTGTGACATCTGTCATGCGGCTATAGGCAACATGTCTTGGACAAGCATGACTGTGACGTCCACAACATTTGTATTTGCCTCTATCTTCTATCTATTATATTTTTATGAATGTTGCCGGAAATTTCATTAACCTGGATTGCATATGATGAGATACATTGCCCAAAAAGAAAAGGGAAACCAACACTAAAATGAGCAAATATTGGGTGGTATTGCAGGAAGCAGCTCTGACGAAAACCAGGGAGTTGAAGAAGTTATGTGAAAGCACTTTATCATCCATGTTCGATGGAAGGCCTGTCAACATTATTGGCGAGATCAATACTGTCTTAACAAGTGGCCTCACCGCGTAAGTACCCAACAATGTCTTTGCCTCTGTCATCACCACACACTTTTGAAGCTAACTCTTGAGAATAAAAAGAATATGTGGATTGCTGTTCCTCACCCTATTTCTCCCTAAACCAATCTGTAAACACAGTAGCTTTACTAATGCTTTTAACTTTACATCATCATCACCTTTCAGTTTGTTTTGATTTGTTTTTCTGTAGTGTTACGAAGGCTAAATACATGTTTTTAAGAGTTGTGTTGGAGTCTTTTTTCATATAAGTTCTATTTTATCTTTTAATGGTAACGAATGATCGAACGATGTATTTGCTCAAAATTTGATAATACAAATAGTTGTGAAATGGGACAAAGCAGTTGATCATGTATGTTTGTAATCAACTTTAATTTAGATGAATAACTGCTCAATTCCTTAGATCCTTTAGGCAATTGGCCCATATATTGGGTTAGTTAACAGATGTCTATGCTTAAACACTTCTCCTATATTGGTTTTATGAAAT

mRNA sequence

GAAGGAAAAATTGCCTCTCCCTCGATCCTGAACAAAACTCTTACACACCCTAAGCAACGATTTCTTAGTGCAAAAAGAACTATGGCTGCCGACGATATTCGGAATCTTCCAATTGACATCACATTCTCTCGTCTTGGTGAGTGGCTTGTCGATCGGAAAAGAGTCCCTGCTGATTGGCGTAAGCGTTTGGCAGCGTTGAGAGTTCGCATCTCCAAGGAGTTCTTGTCTCTTCCCAAAGATACCGATCCCTATTTCCATACCTTAGGCCATGAAGATATTGGTTATTTAGAGGCAAAAAAAATATATAATATTCTTCTAGAGTCAACCTCAGAAACCCGGAATATATTTGGCCGGCTATCAGGTGCTGCTGGTGCTTGGGAGGTGATTGTACGAACTTATGAGAAGGATCATATTTTTCTTGGCGAGGCAGCTCAAATAATTGTTCAGAATGTGACTTATGAAATCCCATATCAGAAGAAACAGGTCCAAAAGATTCATCAACAGCTTGCTGAGCTGGAACGTAAAGAATCTGATACTAAAAGAAATGCTTCTCTTTCGGCAGCTAGATATGTAGAGGCTTGTCAGGACCTCGGTTTGCAGGGAAAAAATGTTAGAGATGAACTTCTGGAGACTGCAAGGTCACTTCCAAGCACATTTAGCAGAATATTAGAAGTCATAAATGGTGATTCTGTGTCACGTGCTATTGAATACTATTCCAATTTTGTAAGGGATGCTCACTCGGATAAGGATAAACACGTGACTGTATTACCAAACCTGGGGCATATACGTGAGCATCCTCCTTCTTTACATGTGTCTGTGGGCTTTGAGATGGTTGATTCTGTAAATGTTCAGTCAAGCTATATAGAACCAGATGCTATTGGACAAACAGGAATTGCTGCTGATAATATTGACTGGGATATATCCTTGGAAAATACTCAAATTGACTGGGATATAGGTGCACTGGAGGAAACTGAGGATACAGGAAATGGTTTGGGACCTTACGAAATAGTTCATGCGAGTGAAGCTTTGGAATCATCATACCAAATGGAACCTAGTAAAGAGGGTAGTACTACATTGCCAGAGGCTACTGTGTCTGAGATCTCATGGGATGTCAGTGTTGAAACACCTCAAGTTGATATCATCGATGATGTAACCTTGCCTGATATAGAAGTGAATAATAAAACATTCATTCCTTCAACTCATTCTGCAGAAATCACTGAAGTTAGAAGCCAGCTTTTGGAGACCGAGTATAGGAATAAGATTCTTGATGATCTATATGAGATAAAGGCATTTCTAAGTCAACGTTTGAATGATTTGAAGAATGATGAAACTCTGTCTTTGCAACATCAAGTCCAGGCAGTTTCTCCCTTTGTGCTGCAGCAATATACTCCTGATGCCATTGAGATGATGCTATCAGATGTTTCCATGGCTATATCATTACTGTCAAGTAGGAAAACTCAAGATTTAATTATGATTCTCAATTCTAAAAGGGAAACTGATGTGAACTTTGATTTCAGATTTCTAGAGAGATTAGTTAGTAAACTAGAGGAAAAGAAGCAGCGTGAAGTGAAGCTGAAGGAAGGGCTGAAGGACTTGTCTGCCAAACGTATGGAGCTTCAAAATTCATTAGCTTCATCTTGGCCAAAACAAGAAGCAGCTCTGACGAAAACCAGGGAGTTGAAGAAGTTATGTGAAAGCACTTTATCATCCATGTTCGATGGAAGGCCTGTCAACATTATTGGCGAGATCAATACTGTCTTAACAAGTGGCCTCACCGCGTAAGTACCCAACAATGTCTTTGCCTCTGTCATCACCACACACTTTTGAAGCTAACTCTTGAGAATAAAAAGAATATGTGGATTGCTGTTCCTCACCCTATTTCTCCCTAAACCAATCTGTAAACACAGTAGCTTTACTAATGCTTTTAACTTTACATCATCATCACCTTTCAGTTTGTTTTGATTTGTTTTTCTGTAGTGTTACGAAGGCTAAATACATGTTTTTAAGAGTTGTGTTGGAGTCTTTTTTCATATAAGTTCTATTTTATCTTTTAATGGTAACGAATGATCGAACGATGTATTTGCTCAAAATTTGATAATACAAATAGTTGTGAAATGGGACAAAGCAGTTGATCATGTATGTTTGTAATCAACTTTAATTTAGATGAATAACTGCTCAATTCCTTAGATCCTTTAGGCAATTGGCCCATATATTGGGTTAGTTAACAGATGTCTATGCTTAAACACTTCTCCTATATTGGTTTTATGAAAT

Coding sequence (CDS)

ATGGCTGCCGACGATATTCGGAATCTTCCAATTGACATCACATTCTCTCGTCTTGGTGAGTGGCTTGTCGATCGGAAAAGAGTCCCTGCTGATTGGCGTAAGCGTTTGGCAGCGTTGAGAGTTCGCATCTCCAAGGAGTTCTTGTCTCTTCCCAAAGATACCGATCCCTATTTCCATACCTTAGGCCATGAAGATATTGGTTATTTAGAGGCAAAAAAAATATATAATATTCTTCTAGAGTCAACCTCAGAAACCCGGAATATATTTGGCCGGCTATCAGGTGCTGCTGGTGCTTGGGAGGTGATTGTACGAACTTATGAGAAGGATCATATTTTTCTTGGCGAGGCAGCTCAAATAATTGTTCAGAATGTGACTTATGAAATCCCATATCAGAAGAAACAGGTCCAAAAGATTCATCAACAGCTTGCTGAGCTGGAACGTAAAGAATCTGATACTAAAAGAAATGCTTCTCTTTCGGCAGCTAGATATGTAGAGGCTTGTCAGGACCTCGGTTTGCAGGGAAAAAATGTTAGAGATGAACTTCTGGAGACTGCAAGGTCACTTCCAAGCACATTTAGCAGAATATTAGAAGTCATAAATGGTGATTCTGTGTCACGTGCTATTGAATACTATTCCAATTTTGTAAGGGATGCTCACTCGGATAAGGATAAACACGTGACTGTATTACCAAACCTGGGGCATATACGTGAGCATCCTCCTTCTTTACATGTGTCTGTGGGCTTTGAGATGGTTGATTCTGTAAATGTTCAGTCAAGCTATATAGAACCAGATGCTATTGGACAAACAGGAATTGCTGCTGATAATATTGACTGGGATATATCCTTGGAAAATACTCAAATTGACTGGGATATAGGTGCACTGGAGGAAACTGAGGATACAGGAAATGGTTTGGGACCTTACGAAATAGTTCATGCGAGTGAAGCTTTGGAATCATCATACCAAATGGAACCTAGTAAAGAGGGTAGTACTACATTGCCAGAGGCTACTGTGTCTGAGATCTCATGGGATGTCAGTGTTGAAACACCTCAAGTTGATATCATCGATGATGTAACCTTGCCTGATATAGAAGTGAATAATAAAACATTCATTCCTTCAACTCATTCTGCAGAAATCACTGAAGTTAGAAGCCAGCTTTTGGAGACCGAGTATAGGAATAAGATTCTTGATGATCTATATGAGATAAAGGCATTTCTAAGTCAACGTTTGAATGATTTGAAGAATGATGAAACTCTGTCTTTGCAACATCAAGTCCAGGCAGTTTCTCCCTTTGTGCTGCAGCAATATACTCCTGATGCCATTGAGATGATGCTATCAGATGTTTCCATGGCTATATCATTACTGTCAAGTAGGAAAACTCAAGATTTAATTATGATTCTCAATTCTAAAAGGGAAACTGATGTGAACTTTGATTTCAGATTTCTAGAGAGATTAGTTAGTAAACTAGAGGAAAAGAAGCAGCGTGAAGTGAAGCTGAAGGAAGGGCTGAAGGACTTGTCTGCCAAACGTATGGAGCTTCAAAATTCATTAGCTTCATCTTGGCCAAAACAAGAAGCAGCTCTGACGAAAACCAGGGAGTTGAAGAAGTTATGTGAAAGCACTTTATCATCCATGTTCGATGGAAGGCCTGTCAACATTATTGGCGAGATCAATACTGTCTTAACAAGTGGCCTCACCGCGTAA

Protein sequence

MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHTLGHEDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQIIVQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDELLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPPSLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDTGNGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLPDIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSLQHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNFDFRFLERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCESTLSSMFDGRPVNIIGEINTVLTSGLTA

Homology

[Close]

BLAST of Cp4.1LG10g12470 vs. ExPASy Swiss-Prot
Match: Q9FG23 (CDK5RAP3-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g06830 PE=2 SV=2)

HSP 1 Score: 669.5 bits (1726), Expect = 3.4e-191
Identity = 366/570 (64.21%), Postives = 450/570 (78.95%), Query Frame = 0


Query: 4   DDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHTLGH 63
           DD++NLPIDITFSRLGEWLVDRKR+PADWRKR+A +RV+I KEF SLPK+ DP+F TL  
Sbjct: 5   DDVQNLPIDITFSRLGEWLVDRKRIPADWRKRVAVIRVKILKEFSSLPKEIDPFFQTLDP 64

Query: 64  EDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQIIVQN 123
           E IGYLE KK+Y ILL++T E+RNIFGRLSGA+G WE IVR +EKDHI+LGEAAQII+QN
Sbjct: 65  EVIGYLEVKKVYEILLKTTPESRNIFGRLSGASGVWEAIVRAFEKDHIYLGEAAQIIIQN 124

Query: 124 VTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDELLE 183
           V YEIPY KKQVQK+ QQ+ EL+RKE+D KR+ +LSA +Y +AC++LGLQG NVR ELLE
Sbjct: 125 VNYEIPYLKKQVQKVQQQMTELDRKEADIKRSVALSATKYEDACRELGLQGNNVRRELLE 184

Query: 184 TARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHV-TVLPNLGHIREHPPSL 243
           TA SLPSTFS+ILEVIN DSV+ A+EYYS +V+D H++KDK +  VL NL +IRE+PPSL
Sbjct: 185 TASSLPSTFSKILEVINSDSVTGAMEYYSAYVQDVHTEKDKPLRIVLQNLKYIRENPPSL 244

Query: 244 HVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDTGN 303
            V    E +D+ N+QSS    +    T  AAD+IDWDI++E  +IDWD+  +EE  D+GN
Sbjct: 245 SVFGDSEGLDADNIQSS----ENANGTDAAADSIDWDITVETPEIDWDVSMVEEV-DSGN 304

Query: 304 GLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLPDI 363
            LG YEIV+AS+  E+S    P K   +   E  VSEISWDVSVETPQV+ I D  L  +
Sbjct: 305 DLGSYEIVNASDIPENS----PFKVEESQGLEVDVSEISWDVSVETPQVEEIGDSAL--L 364

Query: 364 EVNNKTFIPSTHSAEITEV------RSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDE 423
           E N      ST     T+V      RSQLLETEYRNKILDDLYE+KAFL+QRL +L+N++
Sbjct: 365 ESNQTQLTDST-----TQVLGSGGERSQLLETEYRNKILDDLYEVKAFLNQRLIELRNED 424

Query: 424 TLSLQHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNF 483
           TLSLQH VQAVSP VLQQY+P+ IE M+ D+SMAISLL+++K++DLIMILNSK       
Sbjct: 425 TLSLQHHVQAVSPMVLQQYSPETIEPMVVDISMAISLLTNKKSRDLIMILNSK------- 484

Query: 484 DFRFLERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKL 543
             RFL+RLVS+LEEKK REVKL+E LKD+  +RMELQNSL++ WPKQEAAL+KTRELK+L
Sbjct: 485 --RFLDRLVSELEEKKHREVKLRESLKDVGRRRMELQNSLSAIWPKQEAALSKTRELKEL 544

Query: 544 CESTLSSMFDGRPVNIIGEINTVLTSGLTA 567
           CE++LSSMFDGRPVNI GEINT+L +G++A
Sbjct: 545 CETSLSSMFDGRPVNIRGEINTLLNAGVSA 549

[Close]

BLAST of Cp4.1LG10g12470 vs. ExPASy Swiss-Prot
Match: Q9JLH7 (CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-43
Identity = 160/562 (28.47%), Postives = 262/562 (46.62%), Query Frame = 0


Query: 5   DIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHTLGHE 64
           D +++PIDI  S+L +WLVDR+     W+  +  +R +I+     +P ++      L   
Sbjct: 3   DHQHVPIDIQTSKLLDWLVDRRHCNLKWQSLVLTIREKINTAIQDMP-ESQEIAQLLSGS 62

Query: 65  DIGYLEAKKIYNILLESTSETRNIFGRLSG-AAGAWEVIVRTYEKDHIFLGEAAQIIVQN 124
            I Y    +I ++L  + + T+NIFGR S      W+ I+  YEKD+ +L E + ++V+N
Sbjct: 63  YIHYFHCLRIVDLLKGTEASTKNIFGRYSSQRMKDWQEIISLYEKDNTYLVELSSLLVRN 122

Query: 125 VTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDELLE 184
           V YEIP  KKQ+ K  Q   +  RKE + +  A+    ++  +C+  G+ G NVR ELL 
Sbjct: 123 VNYEIPSLKKQIAKCQQLQQDYSRKEEEGQAGAAEMREQFYHSCKQYGITGDNVRRELLA 182

Query: 185 TARSLPSTFSRILEVINGDSVSRAIEYYS---NFVRDAHSDKDKHVTVLPNLGHIREHPP 244
             + LPS  + I       S+  AI+ Y     FV D+ +++     VLP L +++    
Sbjct: 183 LVKDLPSQLAEI--GAGAQSLGEAIDLYQACVEFVCDSPTEQ-----VLPMLRYVQPKGN 242

Query: 245 SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 304
           S           +V    +  EP  + +  +     D    ++  +IDW    LE   D+
Sbjct: 243 S-----------TVYEWRTGTEPSVVERPQLE----DPPEQVQEDEIDWGDFGLEAVSDS 302

Query: 305 GNGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDI-IDDVTL 364
           GN                             +  A    I W +S+E+   D   D +  
Sbjct: 303 GN-----------------------------IISAETPGIDWGISLESESKDAGADKIDW 362

Query: 365 PDIEVNNKTFIPSTHS------AEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLK 424
            D  V ++  +  T +      A  ++  + L   E RN+ +D+L E++ FLSQR  ++ 
Sbjct: 363 GDNAVASEITVLETGTEAPEGVARGSDALTLLEYPETRNQFIDELMELEIFLSQRAVEMS 422

Query: 425 NDETLSLQHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETD 484
            +  +    Q Q ++P +LQ  T + +  ++S +   I  L+S   Q L MIL S R  D
Sbjct: 423 EEADILSVSQFQ-LAPAILQGQTKEKMLSLVSTLQHLIGQLTSLDLQHLFMILASPRYVD 482

Query: 485 VNFDFRFLERLVSKLEEKKQREVKLKEGLKDLSA-KRMELQNSLASSWPKQEAALTKTRE 544
                R  E L  KL++ +   +K     KDL   K+ E     A+  PK +  L KTRE
Sbjct: 483 -----RVTELLQQKLKQSQLLALK-----KDLMVEKQQEALQEQAALEPKLDLLLEKTRE 501

Query: 545 LKKLCESTLSSMFDGRPVNIIG 555
           L+KL E+ +S  ++GRPVN++G
Sbjct: 543 LQKLIEADISKRYNGRPVNLMG 501

[Close]

BLAST of Cp4.1LG10g12470 vs. ExPASy Swiss-Prot
Match: Q96JB5 (CDK5 regulatory subunit-associated protein 3 OS=Homo sapiens OX=9606 GN=CDK5RAP3 PE=1 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 3.1e-43
Identity = 165/558 (29.57%), Postives = 264/558 (47.31%), Query Frame = 0


Query: 4   DDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHTLGH 63
           +D +++PIDI  S+L +WLVDR+     W+  +  +R +I+     +P +++     L  
Sbjct: 2   EDHQHVPIDIQTSKLLDWLVDRRHCSLKWQSLVLTIREKINAAIQDMP-ESEEIAQLLSG 61

Query: 64  EDIGYLEAKKIYNILLESTSETRNIFGRLSG-AAGAWEVIVRTYEKDHIFLGEAAQIIVQ 123
             I Y    +I ++L  + + T+NIFGR S      W+ I+  YEKD+ +L E + ++V+
Sbjct: 62  SYIHYFHCLRILDLLKGTEASTKNIFGRYSSQRMKDWQEIIALYEKDNTYLVELSSLLVR 121

Query: 124 NVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDELL 183
           NV YEIP  KKQ+ K  Q   E  RKE + +  A+    ++  +C+  G+ G+NVR ELL
Sbjct: 122 NVNYEIPSLKKQIAKCQQLQQEYSRKEEECQAGAAEMREQFYHSCKQYGITGENVRGELL 181

Query: 184 ETARSLPSTFSRILEVINGDSVSRAIEYYS---NFVRDAHSDKDKHVTVLPNLGHIREHP 243
              + LPS  + I       S+  AI+ Y     FV ++ +++     VLP L  +++  
Sbjct: 182 ALVKDLPSQLAEIGAAAQ-QSLGEAIDVYQASVGFVCESPTEQ-----VLPMLRFVQKRG 241

Query: 244 PSLHVSVGFEMVDSVNVQSSYIE--PDAIGQTGIAADNIDW-DISLENTQIDWDIGALEE 303
            S           SV V+  ++E  P+      +A D IDW D  +E      D G   E
Sbjct: 242 NSTVYEWRTGTEPSV-VERPHLEELPEQ-----VAEDAIDWGDFGVEAVSEGTDSGISAE 301

Query: 304 TEDTGNGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDD 363
                 G+ P            S   +P  +G           I W       Q+ +++ 
Sbjct: 302 AAGIDWGIFP-----------ESDSKDPGGDG-----------IDWGDDAVALQITVLEA 361

Query: 364 VTLPDIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDE 423
            T     V           A   +  + L  TE RN+ LD+L E++ FL+QR  +L  + 
Sbjct: 362 GTQAPEGV-----------ARGPDALTLLEYTETRNQFLDELMELEIFLAQRAVELSEEA 421

Query: 424 TLSLQHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNF 483
            +    Q Q ++P +LQ  T + +  M+S +   I  L+S + Q L MIL S R  D   
Sbjct: 422 DVLSVSQFQ-LAPAILQGQTKEKMVTMVSVLEDLIGKLTSLQLQHLFMILASPRYVD--- 481

Query: 484 DFRFLERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKL 543
             R  E L  KL  K+ + + LK+ L  +  K+ E     A+  PK +  L KT+EL+KL
Sbjct: 482 --RVTEFLQQKL--KQSQLLALKKEL--MVQKQQEALEEQAALEPKLDLLLEKTKELQKL 503

Query: 544 CESTLSSMFDGRPVNIIG 555
            E+ +S  + GRPVN++G
Sbjct: 542 IEADISKRYSGRPVNLMG 503

[Close]

BLAST of Cp4.1LG10g12470 vs. ExPASy Swiss-Prot
Match: Q99LM2 (CDK5 regulatory subunit-associated protein 3 OS=Mus musculus OX=10090 GN=Cdk5rap3 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.1e-43
Identity = 159/555 (28.65%), Postives = 262/555 (47.21%), Query Frame = 0


Query: 5   DIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHTLGHE 64
           D +++PIDI  S+L +WLVDR+     W+  +  +R +I+     +P ++      L   
Sbjct: 3   DHQHVPIDIQTSKLLDWLVDRRHCNLKWQSLVLTIREKINTAIQDMP-ESQEIAQLLSGS 62

Query: 65  DIGYLEAKKIYNILLESTSETRNIFGRLSG-AAGAWEVIVRTYEKDHIFLGEAAQIIVQN 124
            I Y    +I ++L  + + T+NIFGR S      W+ IV  YEKD+ +L E   ++V+N
Sbjct: 63  YIHYFHCLRIVDLLKGTEASTKNIFGRYSSQRMKDWQEIVSLYEKDNTYLVELCSLLVRN 122

Query: 125 VTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDELLE 184
           V+YEIP  KKQ+ K  Q   E  RKE + +  A+    ++  +C+  G+ G NVR ELL 
Sbjct: 123 VSYEIPSLKKQIAKCQQLQQEYSRKEEEGQAGAAEMREQFYHSCKQYGITGDNVRRELLA 182

Query: 185 TARSLPSTFSRILEVINGDSVSRAIEYYS---NFVRDAHSDKDKHVTVLPNLGHIREHPP 244
             + LPS  + I       S+  AI+ Y     FV D+ +++     VLP L ++++   
Sbjct: 183 LVKDLPSQLAEI--GAGAQSLGEAIDLYQACVEFVCDSPTEQ-----VLPMLRYVQKKGN 242

Query: 245 SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 304
           S           SV  +    EP                  ++  +IDW    +E   D+
Sbjct: 243 STVYEWRTGTEPSVVERPQLEEPPE---------------QVQEDEIDWGDFGVEAVSDS 302

Query: 305 GNGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISW-DVSVETPQVDIIDDVTL 364
           G       IV  +  ++    +E   +      +A   +I W D +    ++ +++  T 
Sbjct: 303 G-------IVAETPGIDWGISLESEAK------DAGADKIDWGDDAAAASEITVLETGTE 362

Query: 365 PDIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLS 424
               V           A  ++  + L   E RN+ +D+L E++ FLSQR  ++  +  + 
Sbjct: 363 APEGV-----------ARGSDALTLLEYPETRNQFIDELMELEIFLSQRAVEMSEEADIL 422

Query: 425 LQHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNFDFR 484
              Q Q ++P +LQ  T + +  ++S +   I  L+S + Q L MIL S R  D     R
Sbjct: 423 SVSQFQ-LAPAILQGQTKEKMLSLVSTLQQLIGRLTSLRMQHLFMILASPRYVD-----R 482

Query: 485 FLERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCES 544
             E L  KL  K+ + + LK+ L  +  K+ E     A+  PK +  L KTREL+KL E+
Sbjct: 483 VTEFLQQKL--KQSQLLALKKEL--MVEKQQEALQEQAALEPKLDLLLEKTRELQKLIEA 500

Query: 545 TLSSMFDGRPVNIIG 555
            +S  + GRPVN++G
Sbjct: 543 DISKRYSGRPVNLMG 500

[Close]

BLAST of Cp4.1LG10g12470 vs. ExPASy Swiss-Prot
Match: Q5REX6 (CDK5 regulatory subunit-associated protein 3 OS=Pongo abelii OX=9601 GN=CDK5RAP3 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.2e-42
Identity = 162/557 (29.08%), Postives = 262/557 (47.04%), Query Frame = 0


Query: 4   DDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHTLGH 63
           +D +++PIDI  S+L +WLVDR+     W+  +  +R +I+     +P +++     L  
Sbjct: 2   EDHQHVPIDIQTSKLLDWLVDRRHCSLKWQSLVLTIREKINAAIQDMP-ESEEIAQLLSG 61

Query: 64  EDIGYLEAKKIYNILLESTSETRNIFGRLSG-AAGAWEVIVRTYEKDHIFLGEAAQIIVQ 123
             I Y    +I ++L  + + T+NIFGR S      W+ I+  YEKD+ +L E + ++V+
Sbjct: 62  SYIHYFHCLRILDLLKGTEASTKNIFGRYSSQRMKDWQEIIALYEKDNTYLVELSSLLVR 121

Query: 124 NVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDELL 183
           NV YEIP  KKQ+ K  Q   E  RKE + +  A+    ++  +C+  G+ G+NVR ELL
Sbjct: 122 NVNYEIPSLKKQIAKCQQLQQEYSRKEEECQAGAAEMREQFYHSCKQYGITGENVRGELL 181

Query: 184 ETARSLPSTFSRILEVINGDSVSRAIEYYS---NFVRDAHSDKDKHVTVLPNLGHIREHP 243
              + LPS  +         S+  AI+ Y     FV ++H+++     VLP L  +++  
Sbjct: 182 ALVKDLPSQLAETGAAAR-QSLGEAIDVYQASVGFVCESHTEQ-----VLPMLQFVQKRG 241

Query: 244 PSLHVSVGFEMVDSVNVQSSYIE--PDAIGQTGIAADNIDWDISLENTQIDWDIGALEET 303
            S           SV V+  ++E  P+      +A D IDW           D G    +
Sbjct: 242 NSTVYEWRTGTEPSV-VERPHLEELPEQ-----VAEDAIDWG----------DFGVEAVS 301

Query: 304 EDTGNGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDV 363
           E T +G+              S   +P  +G           I W       Q+ +++  
Sbjct: 302 EGTDSGISAKAAGIDWGIFPESDSKDPGGDG-----------IDWGDDAVALQITVLEAG 361

Query: 364 TLPDIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDET 423
           T     V           A   +  + L  TE RN+ LD+L E++ FL++R  +L  +  
Sbjct: 362 TQAPEGV-----------ARGPDALTLLEYTETRNQFLDELMELEIFLARRAVELSEEAD 421

Query: 424 LSLQHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNFD 483
           +    Q Q ++P +LQ  T +    M+S +   I  L+S + Q L MIL S R  D    
Sbjct: 422 VLSVSQFQ-LAPAILQGQTKEKTVTMVSVLEDLIGKLTSLQLQHLFMILASPRYVD---- 481

Query: 484 FRFLERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLC 543
            R  E L  KL  K+ + + LK+ L  +  K+ E     A+  PK +  L KT+EL+KL 
Sbjct: 482 -RVTEFLQQKL--KQSQLLALKKEL--MVQKQQEALEEQAALEPKLDLLLEKTKELQKLI 503

Query: 544 ESTLSSMFDGRPVNIIG 555
           E+ +S  + GRPVN++G
Sbjct: 542 EADISKRYSGRPVNLMG 503

[Close]

BLAST of Cp4.1LG10g12470 vs. NCBI nr
Match: XP_023545085.1 (CDK5RAP3-like protein isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1061 bits (2743), Expect = 0.0
Identity = 557/566 (98.41%), Postives = 557/566 (98.41%), Query Frame = 0


Query: 1   MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHT 60
           MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHT
Sbjct: 1   MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHT 60

Query: 61  LGHEDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII 120
           LGHEDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII
Sbjct: 61  LGHEDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII 120

Query: 121 VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE 180
           VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE
Sbjct: 121 VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE 180

Query: 181 LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP 240
           LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP
Sbjct: 181 LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP 240

Query: 241 SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 300
           SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT
Sbjct: 241 SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 300

Query: 301 GNGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP 360
           GNGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP
Sbjct: 301 GNGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP 360

Query: 361 DIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL 420
           DIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL
Sbjct: 361 DIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL 420

Query: 421 QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNFDFRF 480
           QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKR         F
Sbjct: 421 QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKR---------F 480

Query: 481 LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST 540
           LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST
Sbjct: 481 LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST 540

Query: 541 LSSMFDGRPVNIIGEINTVLTSGLTA 566
           LSSMFDGRPVNIIGEINTVLTSGLTA
Sbjct: 541 LSSMFDGRPVNIIGEINTVLTSGLTA 557

[Close]

BLAST of Cp4.1LG10g12470 vs. NCBI nr
Match: KAG6603173.1 (CDK5RAP3-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1051 bits (2719), Expect = 0.0
Identity = 552/566 (97.53%), Postives = 554/566 (97.88%), Query Frame = 0


Query: 1   MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHT 60
           MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRL ALRVRISKEFLSLPKDTDPYFHT
Sbjct: 1   MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLTALRVRISKEFLSLPKDTDPYFHT 60

Query: 61  LGHEDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII 120
           L HEDIGYLEAKKIYNILLESTSE+RNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII
Sbjct: 61  LDHEDIGYLEAKKIYNILLESTSESRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII 120

Query: 121 VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE 180
           VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE
Sbjct: 121 VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE 180

Query: 181 LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP 240
           LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP
Sbjct: 181 LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP 240

Query: 241 SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 300
           SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT
Sbjct: 241 SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 300

Query: 301 GNGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP 360
           GNGLGPYEIVHASEALESSYQME SKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP
Sbjct: 301 GNGLGPYEIVHASEALESSYQMESSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP 360

Query: 361 DIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL 420
           DIEVNNKTF+PSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL
Sbjct: 361 DIEVNNKTFVPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL 420

Query: 421 QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNFDFRF 480
           QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKR         F
Sbjct: 421 QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKR---------F 480

Query: 481 LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST 540
           LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST
Sbjct: 481 LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST 540

Query: 541 LSSMFDGRPVNIIGEINTVLTSGLTA 566
           LSSMFDGRPVNIIGEINTVLTSGLTA
Sbjct: 541 LSSMFDGRPVNIIGEINTVLTSGLTA 557

[Close]

BLAST of Cp4.1LG10g12470 vs. NCBI nr
Match: XP_022928745.1 (CDK5RAP3-like protein isoform X1 [Cucurbita moschata])

HSP 1 Score: 1050 bits (2714), Expect = 0.0
Identity = 551/566 (97.35%), Postives = 553/566 (97.70%), Query Frame = 0


Query: 1   MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHT 60
           MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRL ALRVRISKEFLSLPKDTDPYFHT
Sbjct: 1   MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLTALRVRISKEFLSLPKDTDPYFHT 60

Query: 61  LGHEDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII 120
           L HEDIGYLEAK IYNILLESTSE+RNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII
Sbjct: 61  LDHEDIGYLEAKNIYNILLESTSESRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII 120

Query: 121 VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE 180
           VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE
Sbjct: 121 VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE 180

Query: 181 LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP 240
           LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP
Sbjct: 181 LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP 240

Query: 241 SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 300
           SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT
Sbjct: 241 SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 300

Query: 301 GNGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP 360
           GNGLGPYEIVHASEALESSYQME SKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP
Sbjct: 301 GNGLGPYEIVHASEALESSYQMESSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP 360

Query: 361 DIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL 420
           DIEVNNKTF+PSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL
Sbjct: 361 DIEVNNKTFVPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL 420

Query: 421 QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNFDFRF 480
           QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKR         F
Sbjct: 421 QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKR---------F 480

Query: 481 LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST 540
           LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST
Sbjct: 481 LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST 540

Query: 541 LSSMFDGRPVNIIGEINTVLTSGLTA 566
           LSSMFDGRPVNIIGEINTVLTSGLTA
Sbjct: 541 LSSMFDGRPVNIIGEINTVLTSGLTA 557

[Close]

BLAST of Cp4.1LG10g12470 vs. NCBI nr
Match: XP_022967759.1 (CDK5RAP3-like protein isoform X1 [Cucurbita maxima])

HSP 1 Score: 1040 bits (2688), Expect = 0.0
Identity = 547/566 (96.64%), Postives = 552/566 (97.53%), Query Frame = 0


Query: 1   MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHT 60
           MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHT
Sbjct: 1   MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHT 60

Query: 61  LGHEDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII 120
           L HEDIGYLEAKKIYNILLEST E+RNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII
Sbjct: 61  LDHEDIGYLEAKKIYNILLESTPESRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII 120

Query: 121 VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE 180
           VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVR E
Sbjct: 121 VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRVE 180

Query: 181 LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP 240
           LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLP+LGHIREHPP
Sbjct: 181 LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPSLGHIREHPP 240

Query: 241 SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 300
           SLHVSVGFE+VDSVN QSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT
Sbjct: 241 SLHVSVGFEIVDSVNDQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 300

Query: 301 GNGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP 360
           GNGLGPYEIVHAS+ALESSYQME SKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP
Sbjct: 301 GNGLGPYEIVHASDALESSYQMESSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP 360

Query: 361 DIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL 420
           DIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL
Sbjct: 361 DIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL 420

Query: 421 QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNFDFRF 480
           QHQVQAV+PFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKR         F
Sbjct: 421 QHQVQAVAPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKR---------F 480

Query: 481 LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST 540
           LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST
Sbjct: 481 LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST 540

Query: 541 LSSMFDGRPVNIIGEINTVLTSGLTA 566
           LSSMFDGRPVNIIGEINTVLTSGLTA
Sbjct: 541 LSSMFDGRPVNIIGEINTVLTSGLTA 557

[Close]

BLAST of Cp4.1LG10g12470 vs. NCBI nr
Match: XP_022156811.1 (CDK5RAP3-like protein [Momordica charantia])

HSP 1 Score: 969 bits (2504), Expect = 0.0
Identity = 505/565 (89.38%), Postives = 535/565 (94.69%), Query Frame = 0


Query: 2   AADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHTL 61
           A +DIRNLPIDITFSRLGEWLVDRKR+PADWRKRLAALRVRISKEFLSLPKD +P+FHTL
Sbjct: 3   APEDIRNLPIDITFSRLGEWLVDRKRIPADWRKRLAALRVRISKEFLSLPKDANPHFHTL 62

Query: 62  GHEDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQIIV 121
            HEDIGYLEAKK+YNILLESTSE+RNIFGRLSGAAGAWE IVRTYEKDHIFLGEAAQIIV
Sbjct: 63  DHEDIGYLEAKKVYNILLESTSESRNIFGRLSGAAGAWETIVRTYEKDHIFLGEAAQIIV 122

Query: 122 QNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDEL 181
           QNV YEIPYQKKQVQKIHQQLAEL+RKESDTKRNAS+SA +Y+EACQDLGLQGKNVR EL
Sbjct: 123 QNVIYEIPYQKKQVQKIHQQLAELDRKESDTKRNASISATKYLEACQDLGLQGKNVRVEL 182

Query: 182 LETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPPS 241
           LETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTV+PNLG +REHPPS
Sbjct: 183 LETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVVPNLGDLREHPPS 242

Query: 242 LHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDTG 301
           LHVSVGFE+VDSVNVQSSYIEPDA+G  G AADNIDWDIS+ENTQIDWDIGALEETEDTG
Sbjct: 243 LHVSVGFEIVDSVNVQSSYIEPDAVGGVGTAADNIDWDISVENTQIDWDIGALEETEDTG 302

Query: 302 NGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLPD 361
           NGLGPYEIVHASEA+E   QME +KEGS+TLPE TVSEISWDVSVETPQVDIIDDVTLPD
Sbjct: 303 NGLGPYEIVHASEAVELD-QMESNKEGSSTLPETTVSEISWDVSVETPQVDIIDDVTLPD 362

Query: 362 IEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSLQ 421
           IE+++KTFIPST SAE TEVRSQLLETEYRNKILDDLYE+KAFL+QRLN+LKNDETLSLQ
Sbjct: 363 IEMDHKTFIPSTQSAETTEVRSQLLETEYRNKILDDLYELKAFLNQRLNELKNDETLSLQ 422

Query: 422 HQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNFDFRFL 481
           HQVQAV+PFVLQQYTPDAIE MLSDVS+AISLLSSRKTQDLIMILNSKR         FL
Sbjct: 423 HQVQAVAPFVLQQYTPDAIETMLSDVSLAISLLSSRKTQDLIMILNSKR---------FL 482

Query: 482 ERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCESTL 541
           ERLVS LEEKKQREVKLKEGLKDL+AKRMELQNSLASSWPKQEAAL KTRELKKLCES+L
Sbjct: 483 ERLVSTLEEKKQREVKLKEGLKDLAAKRMELQNSLASSWPKQEAALAKTRELKKLCESSL 542

Query: 542 SSMFDGRPVNIIGEINTVLTSGLTA 566
           SSMFDGRPVNIIGEIN+VLTSGL+A
Sbjct: 543 SSMFDGRPVNIIGEINSVLTSGLSA 557

[Close]

BLAST of Cp4.1LG10g12470 vs. ExPASy TrEMBL
Match: A0A6J1ESG0 (CDK5RAP3-like protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435562 PE=3 SV=1)

HSP 1 Score: 1050 bits (2714), Expect = 0.0
Identity = 551/566 (97.35%), Postives = 553/566 (97.70%), Query Frame = 0


Query: 1   MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHT 60
           MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRL ALRVRISKEFLSLPKDTDPYFHT
Sbjct: 1   MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLTALRVRISKEFLSLPKDTDPYFHT 60

Query: 61  LGHEDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII 120
           L HEDIGYLEAK IYNILLESTSE+RNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII
Sbjct: 61  LDHEDIGYLEAKNIYNILLESTSESRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII 120

Query: 121 VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE 180
           VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE
Sbjct: 121 VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE 180

Query: 181 LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP 240
           LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP
Sbjct: 181 LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP 240

Query: 241 SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 300
           SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT
Sbjct: 241 SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 300

Query: 301 GNGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP 360
           GNGLGPYEIVHASEALESSYQME SKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP
Sbjct: 301 GNGLGPYEIVHASEALESSYQMESSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP 360

Query: 361 DIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL 420
           DIEVNNKTF+PSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL
Sbjct: 361 DIEVNNKTFVPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL 420

Query: 421 QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNFDFRF 480
           QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKR         F
Sbjct: 421 QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKR---------F 480

Query: 481 LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST 540
           LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST
Sbjct: 481 LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST 540

Query: 541 LSSMFDGRPVNIIGEINTVLTSGLTA 566
           LSSMFDGRPVNIIGEINTVLTSGLTA
Sbjct: 541 LSSMFDGRPVNIIGEINTVLTSGLTA 557

[Close]

BLAST of Cp4.1LG10g12470 vs. ExPASy TrEMBL
Match: A0A6J1HXN0 (CDK5RAP3-like protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467185 PE=3 SV=1)

HSP 1 Score: 1040 bits (2688), Expect = 0.0
Identity = 547/566 (96.64%), Postives = 552/566 (97.53%), Query Frame = 0


Query: 1   MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHT 60
           MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHT
Sbjct: 1   MAADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHT 60

Query: 61  LGHEDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII 120
           L HEDIGYLEAKKIYNILLEST E+RNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII
Sbjct: 61  LDHEDIGYLEAKKIYNILLESTPESRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQII 120

Query: 121 VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDE 180
           VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVR E
Sbjct: 121 VQNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRVE 180

Query: 181 LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPP 240
           LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLP+LGHIREHPP
Sbjct: 181 LLETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPSLGHIREHPP 240

Query: 241 SLHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 300
           SLHVSVGFE+VDSVN QSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT
Sbjct: 241 SLHVSVGFEIVDSVNDQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDT 300

Query: 301 GNGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP 360
           GNGLGPYEIVHAS+ALESSYQME SKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP
Sbjct: 301 GNGLGPYEIVHASDALESSYQMESSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLP 360

Query: 361 DIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL 420
           DIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL
Sbjct: 361 DIEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSL 420

Query: 421 QHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNFDFRF 480
           QHQVQAV+PFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKR         F
Sbjct: 421 QHQVQAVAPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKR---------F 480

Query: 481 LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST 540
           LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST
Sbjct: 481 LERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCEST 540

Query: 541 LSSMFDGRPVNIIGEINTVLTSGLTA 566
           LSSMFDGRPVNIIGEINTVLTSGLTA
Sbjct: 541 LSSMFDGRPVNIIGEINTVLTSGLTA 557

[Close]

BLAST of Cp4.1LG10g12470 vs. ExPASy TrEMBL
Match: A0A6J1DW37 (CDK5RAP3-like protein OS=Momordica charantia OX=3673 GN=LOC111023647 PE=3 SV=1)

HSP 1 Score: 969 bits (2504), Expect = 0.0
Identity = 505/565 (89.38%), Postives = 535/565 (94.69%), Query Frame = 0


Query: 2   AADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHTL 61
           A +DIRNLPIDITFSRLGEWLVDRKR+PADWRKRLAALRVRISKEFLSLPKD +P+FHTL
Sbjct: 3   APEDIRNLPIDITFSRLGEWLVDRKRIPADWRKRLAALRVRISKEFLSLPKDANPHFHTL 62

Query: 62  GHEDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQIIV 121
            HEDIGYLEAKK+YNILLESTSE+RNIFGRLSGAAGAWE IVRTYEKDHIFLGEAAQIIV
Sbjct: 63  DHEDIGYLEAKKVYNILLESTSESRNIFGRLSGAAGAWETIVRTYEKDHIFLGEAAQIIV 122

Query: 122 QNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDEL 181
           QNV YEIPYQKKQVQKIHQQLAEL+RKESDTKRNAS+SA +Y+EACQDLGLQGKNVR EL
Sbjct: 123 QNVIYEIPYQKKQVQKIHQQLAELDRKESDTKRNASISATKYLEACQDLGLQGKNVRVEL 182

Query: 182 LETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPPS 241
           LETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTV+PNLG +REHPPS
Sbjct: 183 LETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVVPNLGDLREHPPS 242

Query: 242 LHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDTG 301
           LHVSVGFE+VDSVNVQSSYIEPDA+G  G AADNIDWDIS+ENTQIDWDIGALEETEDTG
Sbjct: 243 LHVSVGFEIVDSVNVQSSYIEPDAVGGVGTAADNIDWDISVENTQIDWDIGALEETEDTG 302

Query: 302 NGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLPD 361
           NGLGPYEIVHASEA+E   QME +KEGS+TLPE TVSEISWDVSVETPQVDIIDDVTLPD
Sbjct: 303 NGLGPYEIVHASEAVELD-QMESNKEGSSTLPETTVSEISWDVSVETPQVDIIDDVTLPD 362

Query: 362 IEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSLQ 421
           IE+++KTFIPST SAE TEVRSQLLETEYRNKILDDLYE+KAFL+QRLN+LKNDETLSLQ
Sbjct: 363 IEMDHKTFIPSTQSAETTEVRSQLLETEYRNKILDDLYELKAFLNQRLNELKNDETLSLQ 422

Query: 422 HQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNFDFRFL 481
           HQVQAV+PFVLQQYTPDAIE MLSDVS+AISLLSSRKTQDLIMILNSKR         FL
Sbjct: 423 HQVQAVAPFVLQQYTPDAIETMLSDVSLAISLLSSRKTQDLIMILNSKR---------FL 482

Query: 482 ERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCESTL 541
           ERLVS LEEKKQREVKLKEGLKDL+AKRMELQNSLASSWPKQEAAL KTRELKKLCES+L
Sbjct: 483 ERLVSTLEEKKQREVKLKEGLKDLAAKRMELQNSLASSWPKQEAALAKTRELKKLCESSL 542

Query: 542 SSMFDGRPVNIIGEINTVLTSGLTA 566
           SSMFDGRPVNIIGEIN+VLTSGL+A
Sbjct: 543 SSMFDGRPVNIIGEINSVLTSGLSA 557

[Close]

BLAST of Cp4.1LG10g12470 vs. ExPASy TrEMBL
Match: A0A1S3B4X6 (CDK5RAP3-like protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486056 PE=3 SV=1)

HSP 1 Score: 961 bits (2483), Expect = 0.0
Identity = 505/565 (89.38%), Postives = 528/565 (93.45%), Query Frame = 0


Query: 2   AADDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHTL 61
           A DDIRNLPIDITFSRLGEWLVDRKR+P+DWRKRLAAL+VRI+KE LSLPKD DPYFHTL
Sbjct: 3   APDDIRNLPIDITFSRLGEWLVDRKRIPSDWRKRLAALKVRITKELLSLPKDADPYFHTL 62

Query: 62  GHEDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQIIV 121
             EDIGYLEAKKIYNILLEST E+RNIFGRLSGAAGAWEVIVR YEKDHIFLGEAAQIIV
Sbjct: 63  DPEDIGYLEAKKIYNILLESTPESRNIFGRLSGAAGAWEVIVRAYEKDHIFLGEAAQIIV 122

Query: 122 QNVTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDEL 181
           QNV YEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAA+YVEACQDLGLQGKNVR EL
Sbjct: 123 QNVNYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAAKYVEACQDLGLQGKNVRSEL 182

Query: 182 LETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPPS 241
           LETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKH+TVLPNL HI EHPPS
Sbjct: 183 LETARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHLTVLPNLRHIHEHPPS 242

Query: 242 LHVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDTG 301
           LHVSVGFE VDSVNVQSSYIEPDAIGQTGIAADNIDWDIS+EN QIDWDIGALEETEDTG
Sbjct: 243 LHVSVGFENVDSVNVQSSYIEPDAIGQTGIAADNIDWDISMENDQIDWDIGALEETEDTG 302

Query: 302 NGLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLPD 361
           NGLGPYEIVHASEA+ES Y ME +KEG TTLPEATVSEISWDVSVETPQVDIIDDVTLPD
Sbjct: 303 NGLGPYEIVHASEAVES-YPMESNKEGCTTLPEATVSEISWDVSVETPQVDIIDDVTLPD 362

Query: 362 IEVNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSLQ 421
           I V++ TFI ST S EITEVRSQLLETEYRNKILDDLYE+KAFLSQRLN+LKNDETLSLQ
Sbjct: 363 IVVDHNTFISSTQSGEITEVRSQLLETEYRNKILDDLYEVKAFLSQRLNELKNDETLSLQ 422

Query: 422 HQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNFDFRFL 481
           HQVQAV+PFVLQQYT DAIE MLSDVS+AI+L+SSRKTQDLIMILNSKR         FL
Sbjct: 423 HQVQAVAPFVLQQYTSDAIETMLSDVSLAITLMSSRKTQDLIMILNSKR---------FL 482

Query: 482 ERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKLCESTL 541
           ERLVS LEEKKQREVKLKEGLK+L+AKRMELQNSLAS WPKQE+A+ KTRELKKLCES+L
Sbjct: 483 ERLVSTLEEKKQREVKLKEGLKELAAKRMELQNSLASFWPKQESAVRKTRELKKLCESSL 542

Query: 542 SSMFDGRPVNIIGEINTVLTSGLTA 566
           SSMFDGRPVNIIGEIN VLTSGLTA
Sbjct: 543 SSMFDGRPVNIIGEINAVLTSGLTA 557

[Close]

BLAST of Cp4.1LG10g12470 vs. ExPASy TrEMBL
Match: A0A0A0L183 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507440 PE=3 SV=1)

HSP 1 Score: 894 bits (2310), Expect = 0.0
Identity = 468/524 (89.31%), Postives = 491/524 (93.70%), Query Frame = 0


Query: 4   DDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHTLGH 63
           DDIRNLPIDITFSRLGEWL+DRKR+P+DWRKRLAAL+VRI+KE LSLPKD DPYFHTL  
Sbjct: 5   DDIRNLPIDITFSRLGEWLIDRKRIPSDWRKRLAALKVRITKELLSLPKDADPYFHTLDP 64

Query: 64  EDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQIIVQN 123
           EDIGYLEAKKIYNILLEST E+RNIFGRLSGAAGAWEVIVR YEKDHIFLGEAAQIIVQN
Sbjct: 65  EDIGYLEAKKIYNILLESTPESRNIFGRLSGAAGAWEVIVRAYEKDHIFLGEAAQIIVQN 124

Query: 124 VTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDELLE 183
           V YEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAA+YVEACQDLGLQGKNVR ELLE
Sbjct: 125 VNYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAAKYVEACQDLGLQGKNVRAELLE 184

Query: 184 TARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHVTVLPNLGHIREHPPSLH 243
           TARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKH+TVLPNL HI EHPPSLH
Sbjct: 185 TARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHLTVLPNLRHIHEHPPSLH 244

Query: 244 VSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDTGNG 303
           VSVGFE VDSVNVQSSYIEPDAIGQTGIAADNIDWDIS+EN QIDWDIGALEETEDTGNG
Sbjct: 245 VSVGFENVDSVNVQSSYIEPDAIGQTGIAADNIDWDISMENAQIDWDIGALEETEDTGNG 304

Query: 304 LGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLPDIE 363
           LGPYEIVHASEA+ES YQME +KEG TTLPE TVSEISWDVSVETPQVDIIDDVTLPDIE
Sbjct: 305 LGPYEIVHASEAVES-YQMESNKEGCTTLPETTVSEISWDVSVETPQVDIIDDVTLPDIE 364

Query: 364 VNNKTFIPSTHSAEITEVRSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDETLSLQHQ 423
           V++ TFIPST S EITEVRSQLLETEYRNKILDDLYE+KAFL+QRLN+LKNDETLSLQHQ
Sbjct: 365 VDHNTFIPSTQSGEITEVRSQLLETEYRNKILDDLYEVKAFLTQRLNELKNDETLSLQHQ 424

Query: 424 VQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNFDFRFLER 483
           VQAV+PFVLQQYT DAIE MLSDVS+AISL+SSRKTQDLIMILNSKR         FLER
Sbjct: 425 VQAVAPFVLQQYTSDAIETMLSDVSLAISLMSSRKTQDLIMILNSKR---------FLER 484

Query: 484 LVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAAL 527
           LVS LEEKKQREVKLKEGLK+L+AKRMELQNSLAS WPKQ ++L
Sbjct: 485 LVSTLEEKKQREVKLKEGLKELAAKRMELQNSLASFWPKQVSSL 518

[Close]

BLAST of Cp4.1LG10g12470 vs. TAIR 10
Match: AT5G06830.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF773 (InterPro:IPR008491); Has 365 Blast hits to 359 proteins in 109 species: Archae - 9; Bacteria - 13; Metazoa - 209; Fungi - 7; Plants - 47; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). )

HSP 1 Score: 669.5 bits (1726), Expect = 2.4e-192
Identity = 366/570 (64.21%), Postives = 450/570 (78.95%), Query Frame = 0


Query: 4   DDIRNLPIDITFSRLGEWLVDRKRVPADWRKRLAALRVRISKEFLSLPKDTDPYFHTLGH 63
           DD++NLPIDITFSRLGEWLVDRKR+PADWRKR+A +RV+I KEF SLPK+ DP+F TL  
Sbjct: 5   DDVQNLPIDITFSRLGEWLVDRKRIPADWRKRVAVIRVKILKEFSSLPKEIDPFFQTLDP 64

Query: 64  EDIGYLEAKKIYNILLESTSETRNIFGRLSGAAGAWEVIVRTYEKDHIFLGEAAQIIVQN 123
           E IGYLE KK+Y ILL++T E+RNIFGRLSGA+G WE IVR +EKDHI+LGEAAQII+QN
Sbjct: 65  EVIGYLEVKKVYEILLKTTPESRNIFGRLSGASGVWEAIVRAFEKDHIYLGEAAQIIIQN 124

Query: 124 VTYEIPYQKKQVQKIHQQLAELERKESDTKRNASLSAARYVEACQDLGLQGKNVRDELLE 183
           V YEIPY KKQVQK+ QQ+ EL+RKE+D KR+ +LSA +Y +AC++LGLQG NVR ELLE
Sbjct: 125 VNYEIPYLKKQVQKVQQQMTELDRKEADIKRSVALSATKYEDACRELGLQGNNVRRELLE 184

Query: 184 TARSLPSTFSRILEVINGDSVSRAIEYYSNFVRDAHSDKDKHV-TVLPNLGHIREHPPSL 243
           TA SLPSTFS+ILEVIN DSV+ A+EYYS +V+D H++KDK +  VL NL +IRE+PPSL
Sbjct: 185 TASSLPSTFSKILEVINSDSVTGAMEYYSAYVQDVHTEKDKPLRIVLQNLKYIRENPPSL 244

Query: 244 HVSVGFEMVDSVNVQSSYIEPDAIGQTGIAADNIDWDISLENTQIDWDIGALEETEDTGN 303
            V    E +D+ N+QSS    +    T  AAD+IDWDI++E  +IDWD+  +EE  D+GN
Sbjct: 245 SVFGDSEGLDADNIQSS----ENANGTDAAADSIDWDITVETPEIDWDVSMVEEV-DSGN 304

Query: 304 GLGPYEIVHASEALESSYQMEPSKEGSTTLPEATVSEISWDVSVETPQVDIIDDVTLPDI 363
            LG YEIV+AS+  E+S    P K   +   E  VSEISWDVSVETPQV+ I D  L  +
Sbjct: 305 DLGSYEIVNASDIPENS----PFKVEESQGLEVDVSEISWDVSVETPQVEEIGDSAL--L 364

Query: 364 EVNNKTFIPSTHSAEITEV------RSQLLETEYRNKILDDLYEIKAFLSQRLNDLKNDE 423
           E N      ST     T+V      RSQLLETEYRNKILDDLYE+KAFL+QRL +L+N++
Sbjct: 365 ESNQTQLTDST-----TQVLGSGGERSQLLETEYRNKILDDLYEVKAFLNQRLIELRNED 424

Query: 424 TLSLQHQVQAVSPFVLQQYTPDAIEMMLSDVSMAISLLSSRKTQDLIMILNSKRETDVNF 483
           TLSLQH VQAVSP VLQQY+P+ IE M+ D+SMAISLL+++K++DLIMILNSK       
Sbjct: 425 TLSLQHHVQAVSPMVLQQYSPETIEPMVVDISMAISLLTNKKSRDLIMILNSK------- 484

Query: 484 DFRFLERLVSKLEEKKQREVKLKEGLKDLSAKRMELQNSLASSWPKQEAALTKTRELKKL 543
             RFL+RLVS+LEEKK REVKL+E LKD+  +RMELQNSL++ WPKQEAAL+KTRELK+L
Sbjct: 485 --RFLDRLVSELEEKKHREVKLRESLKDVGRRRMELQNSLSAIWPKQEAALSKTRELKEL 544

Query: 544 CESTLSSMFDGRPVNIIGEINTVLTSGLTA 567
           CE++LSSMFDGRPVNI GEINT+L +G++A
Sbjct: 545 CETSLSSMFDGRPVNIRGEINTLLNAGVSA 549

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g12470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FG23	3.4e-191	64.21	CDK5RAP3-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g06830 PE=2 SV=2	[more]
Q9JLH7	1.8e-43	28.47	CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cd...	[more]
Q96JB5	3.1e-43	29.57	CDK5 regulatory subunit-associated protein 3 OS=Homo sapiens OX=9606 GN=CDK5RAP3...	[more]
Q99LM2	4.1e-43	28.65	CDK5 regulatory subunit-associated protein 3 OS=Mus musculus OX=10090 GN=Cdk5rap...	[more]
Q5REX6	1.2e-42	29.08	CDK5 regulatory subunit-associated protein 3 OS=Pongo abelii OX=9601 GN=CDK5RAP3...	[more]

BLAST of Cp4.1LG10g12470 vs. NCBI nr


Match Name	Identity	Description
XP_023545085.1	98.41	CDK5RAP3-like protein isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6603173.1	97.53	CDK5RAP3-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022928745.1	97.35	CDK5RAP3-like protein isoform X1 [Cucurbita moschata]	[more]
XP_022967759.1	96.64	CDK5RAP3-like protein isoform X1 [Cucurbita maxima]	[more]
XP_022156811.1	89.38	CDK5RAP3-like protein [Momordica charantia]	[more]

BLAST of Cp4.1LG10g12470 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1ESG0	97.35	CDK5RAP3-like protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435562 P...	[more]
A0A6J1HXN0	96.64	CDK5RAP3-like protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467185 PE=...	[more]
A0A6J1DW37	89.38	CDK5RAP3-like protein OS=Momordica charantia OX=3673 GN=LOC111023647 PE=3 SV=1	[more]
A0A1S3B4X6	89.38	CDK5RAP3-like protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486056 PE=3 SV...	[more]
A0A0A0L183	89.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507440 PE=3 SV=1	[more]

BLAST of Cp4.1LG10g12470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06830.1	2.4e-192	64.21	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF773 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 135..155
None	No IPR available	COILS	Coil	Coil	coord: 481..508
None	No IPR available	COILS	Coil	Coil	coord: 395..415
None	No IPR available	PANTHER	PTHR14894:SF0	CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3	coord: 3..558
IPR008491	CDK5 regulatory subunit-associated protein 3	PFAM	PF05600	DUF773	coord: 7..554 e-value: 5.4E-165 score: 550.0
IPR008491	CDK5 regulatory subunit-associated protein 3	PANTHER	PTHR14894	CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3	coord: 3..558

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g12470.1	Cp4.1LG10g12470.1	mRNA