Cp4.1LG10g05600 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g05600
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	cyclic phosphodiesterase-like
Location	Cp4.1LG10: 799477 .. 806021 (-)
RNA-Seq Expression	Cp4.1LG10g05600
Synteny	Cp4.1LG10g05600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCCCATTTCTTCTCCGGTTGCTGTTGCTTCCAATGTTCTCAATTCTGCTGCTTTAATGGCCACAACTCACAAAACCCAGGTTTTGTTTATTTGAAACTGACCCACTTCTAAATATGGACGCTTTGACCACTACTCTTTGCAAGTCCATCGAAGCTTTAGGGCGCGGTTTTGATGTCACCGCCGATATTCGTCTTCTTTACTGCAAGGGAACACCAGGGTCGAGGCTGGTTCACCTCAATGATACCCACACCAGGGATCTTGTTCTCTCTGATGGGCTTGTGGTTCTCAATGTGCCTGATGATGTTCAGTGTTCTTCAGAATCCAGGGTAACCGAAAACCTCCCTGTTTGCAGCTTCCACAAGGTGAATTCCCAGCTGTTCTTTCAATTGGGTCTTGTTTCTTTTTGCTTATGATTGACCCCTTTTGCCCCTTCTTGAACTTCCCTTCCTGAATGCTTGTTGATTCAAATGTCAGTTGAGTTTAAATCGGTAGAGCATGGGCTCCTGAACAAACTAACCTGCAAAGAAAAGAGCCCTTTTGTCCATCACTTCAATTCAGCTTGATGGGTCCGAAGCTTCAGATTAGCCCGATCAGGTATTCGCCATCTCCATTATTCTACTGGCTTCAAAATGAGTGTGACCTTGTTAAATCTAATGGTTCTGCTGATGAAGTAGATCACAGTTGGCCGTAAACCTGTAACTGGTCTTAGGCTCAACCTTGAAGGCAGCAAGCAGAATCGACTTGCTATCCATCTCCAACATCTGGTGTCTCTGCCAAAAATTCTCCAACCCCATTGGGACTCACATGTTGCCATAGGTGCCCTTAAATGGCATGGCCCTGAGGAGCAGGACAGCAGGTGGTTTGAACCCATCAAGTGGGAAGAACTTCTCACATGTAAGTACAGCGCCCATAGAGTATACAGAAGCCAACATTGGAGACTTGTCTGGTGTTCACATCGTAACTGGAGCGCAGCTCGGTGTTTGGGACTTCGGTGCCAAAAATGTACTATATTTAAAACTTCTCTTCTCAAAGGTACCTGGCTGCACGATTCGGCGATCAGTCTGGGATCATAGCCCCTCCACCCCTGCTACTCCAATGAGATCTCATGGTGCCTCATCATCTTCCAAAACAAGAACTTCTCAAGATAATAAAAAGGAAGACAGTTCAGCCAATGCTGGAAAACTTGCAAAAGTTGTAGACTTGACAGAAATGTCCAAGGGACCTCAGGATATTCCAGGTCATTGGTTGGTTACAGGGGCTAAGCTCGGGGTCGACAAGGGAAGGATAGTTTTGCGCATCAATTACTCATTGCTGAACTACTGATCGGTCCTTGGTCGGGTATCCCTTCTACAAACTACAAACAAAAGTGGAGCATTTTTTTGCACAGAATTCATGTGTTCTTTTCTCCTCTCGTCCTACATTGTACATCTTTTTAGCTTTATAGCCATTTTTTCATGTTGATTGTCAGAAGCATTTAGTTATAGCCATGTTCTTGTTGTATTCATCACAGTTGTTCTTGTTAGACGACAAGGGCTTTGCTGCTAAATGATAATTGCAGGTAGGATTAGGACCATCCCTTTTCATTTTTGGTTCCTAGATTCCTGCCTATCCACTAAATAATATCCCGCCCATTTTAGGTCGATGCTCGAGAATAAAACGTCTATGATACAAGTATAAAGTTTATTGGATGTACATGAATAATAGAATAGATGCTTTTGAATAAAATGTGTAACACAAGTGTTTATTTATGTACACGAGTATAAAGAAAGCACTAAGATGACTTATTGCTTGGTCCCAATCTTTCAAATTGTCATTCGGGCCAACCAGAATTTATCCACCTTTTCCTAATTCTAATATTCATTTCTATCTATATTTTCTTACCCGATGCTTTAGATACAGGACGAAACCATGATTTGTTCTCTCATACGTTCATCGGCATAAGCACATTGTATTAGCTCCTCCAATAATTTCTGTCTTGAATAAAGTGATTAACATTAATATAATAAATGATTAAGATACTCATAGTGTATACAAACTTTTTAAACAAAATCAACTTTTCTATGAGACTATATCCTATGGAAAAAAAGTTCGCCACATATTTCTATGAATGGAATAACTCACTATCATAACACAACTGTAAGGATTCTCTAAGGTCGATAACTGATATAATAGTGAAGCAGAGGCATGCAGTTATGAACACGCTATCAGAGGTCACACTATTCTTACCATGCAACAAGAAACCGAAAGCTATCAGTTCATGACAGCAATGGAGGATCCTGGCCAGTTCCAATAGTATGTTTGATGTTCTTCATTTGAGCTCCAATTAAGTTCCAATCAAGGAGGTTAGGTCCTTCAGCTGATCTCGTGAGTTGCGAGGTTTATCTGCTAGTTCATTTCTATGGAGGAGATGCTTGAGGTAGTTGAAGGAAAAGTGGACTGGAAGGGAAGATCAGCTTTCAAACAAAAACATGGAGGAACTAAATCTTCTTTGCTCGCACTAGGTACGAAATCATTTACTCATCAACGTTTTTAGATGTAGTGAGCCAAAGTGTAACAGCCCAAGGCCAACACTAGCCGCATATATTGTCTTCTTTGAGCTTTCTCTTTCAAGCTTCCCTCAAAGTTTTAAAACGCGTCTATTAAAAAGAGTTTTTACACCCTTTTAAAAGAATGTTTCGTTTCTCTCTCCAATCGAGGTAGGATCTCACAGAGAAAGAGATCACAGAACGCGCTGTTTAGCAGGCTGCACCCTTGTATGCTCATTGTAATCACAACAGAGTTTCTTGTTTACCTTTTGGGTCTTTTGTTGCAGTGACATATGGTTTCGATCAAATGGCAAACTTCGCGCTTGCAGTGAACTTGACTACGTATTTCAATACTGTGATGCACTTGGAACTAGCGGATGCGGCCAACCAACTGACGAATTACATGGGAACATGTTACATTCTCTCTATTCCAATGGCTGTTCTCGCAGACACATGCTTGGGCAGAGTCAAAACTGTCATCATTTCTGGCTGTCTTGAGTTTCTGGTCAGCCCAACTTTACTGGCTTTACTTTGCTGCCCCTACCGATTCCCATATGCTAAACACTGTTACTGTTATTTTAGGCGCTAATATTGCTCATGATACAAGCTCACTACCCGAAGCTCAAGCCACCACTTTGCAATATATTTGATAAACAATCCCACTGCGAGACAGTTGGAGGAGCAAAAGCTGCCCTCCTCTATGTTCCTCTATATGCATTAGCTATTGGGAATGCAGGCATTAAGGCTGCATTACCACCGCATGGAGCTGATCAATTTGATGAAAAAGACCCCAAAGAGGCGATGCAAATATCCAGCTTCTTCAATCAACTGTTGCTAGGATCGTCCCTCGGTATAGCTGCTAGTTTAACTCTTGTTGTGTGGATCCAAGACAACAAAGGTTGGGACTGGGGTTTCGGGGTATCTTCTGCAGCCATCTTGTTCGGTATAGTCATGTTTGTTGCTGGATTGCCACTGTACAGAATGCACATTATTTCTGGGTCTAATGCAATCGTCCAAGTTTTACAGGTATGTCCGTGAGACAAGCAAAATTCAGAGTTGGAGGCAAATATATTGTTACTTCTGTCCAAATAAATGTTGTTTTTAGGTCTATGTTGCAGCCACTCGTAATAGAAATCTTGTCCTTCCCGAAGACCCTGCAGATCTTTATGAGATTGAAAGGGACAAAGAGGCTGTTATGGAAGAAGACTTTCTGCCTCATAGAAACATTTGCAGGTTTTGTACATGAAACTCTGTTTAAACTTTCTACTTTGACAGCCCCATAAGCATTGAATACCATGATAACTCGAATATACAGGTTTCTAGACAAAGCGGCAATTCAACAAACACCTTGTAGGCAAGTTGACACTCCCGAAGCTTCAAGCCCTTGGAAACTATGCACAGTGACCCAAGTAGAGAATGCCAAAGTAATTCTCAGCATGATACCAATTTTCTGTTGCACAGTGAATATGAGCCTCTGCTTTGCCCAGCTCCAAACATTCTCCATCCAACAGGGCCTCACCATGGACACAAAACTCACACCCTCCTTCAACATCCCTCCGCCGTCACTCACCATCATCCCAGTCTTCTTTCTCATCCTCATGGCCCCAATCTACGACAAGATTCTTGTCCCCTTTGCTCGAAAATTCACAGGCATCCCCACAGGGATCACCCCCTTGCAACGAGTAGGTGTTGGATTGGTTCTGTCCATCATCTCCATGGCCGTCGCGGCACTAGTGGAAGTGAAGCGTAAAGGCGTTGCGAGAGACCACAACATGTTGGATGCAACCCCTGTTTTGCAGCCATTGCCAATCAGCACGTTCTGGCTATCATTTCAATTCTTCATATTCGGAATCGCAGATCTCTTTGCATACGTAGGGCTTCTCGATTTCTTCTACTCCGAGGCGCCAAAAGCCCTAAAATCTGTCTCCACTTGCTTCCTTTGGAGTTCGATGGGCATGGGCTACTTCTTGAGCACCATAATTGTGAAGATTGTGAACAGTGCTACGAAAGGGATTACGAAAAATGGAGGTTGGTTGATTGGAAACAACATTAATCGGAACCATTTGAATCTCTTCTACTGGCTGCTTTCAATCTTGAGCTTCATCAACTTCTTCATCTATATATTTGCTACCCAGAAATACAATTACAGAAACCATAAACCAGCCATCTCCGCCATTGATGATAGTAGGTAGGGAGCCATCATGAGAGAAAAAAAGAAACTAAATTATGCTTAGAATTGAAAACTTTCAAGAACTATGGATCATAAATAATTTGTGTTAAATTTGTAAAATTTCTACCTTCTATGGCTGATGGTTGATTTTAGCTACTCTACATTCAGCATCAAATATGCGCATATTCTTGTAATAAACTTAGATTCCCAACTCCGTATGCACTGCCGGTGGGATAGGTTCAAGTCGCCGCCCTACTGAGCCCACATGGCCCGAAAGTCTATAACCCACGACACGTCGTCATGAAAACCTACCCAAATCTCTCACAACAGTTCAGTCAACGAACTTCAATACTCCATTTTATTTCCGTCTTCTTCTCTTCTCCGCTTCAATGGCGAACCCAGAATCCACCCCTATCCAACCCTCTGAAGGGGAGAAGAACGTGTATTCGGTCTGGGCTCTTCCTCCAGAAGATGTTACGGCCAGAATCAGGACTCTCATGAACAGCCTCAGATCCGAGTTCGGCGGGCCCCAATTCGAGCCACATATCACTGTCGTTGGGGCTATTCGTCTCACCCTTGACGATGCCCTAAACAAATTCCGCTCGGCTTGCGAGGGGCTTAAGGCTTATCAAGCCACCGTCGATTGTGTATCTACCGGAACCTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCATTGAGGTTCGTCCCTCTGTTCTTTATTTTACCTCCTTTTCTCTGTTTGATCGTTCTCTCACTCCCCCTTTTCTTCTTCTCAGGTGGTGGAGACTAGTTCACATTGCTGTGGACATTTTGGTTACAAGAACTCTACCCGTAAGATCCAGTTCTCTTGCGTTAATTTCTTGTTTTTTCCATTTTTTTTTCCAAAAGATATCTTATCCATAGGTTGTTGATTGTTAAATTGAATCATGAATCACATTCAAAATAGTAAATTCAGCTCTGCTTTTCCCTTCCCTCAGATTGTTATGAACATACAGTAGACTTTGATATCTCTGGGTCAGCGTATGTATTTCTAGACTAAGATTACAGGATGAACATTCGAATTTTACGTATTGGGTATTAGAAAACTCTTTAGGATTTGGTAAATTAATGGGTCAAGCTAGGCCTTGGAAAAGAAGTTTTGATAAACTTGTTGGTATTATCCATCTTGTTGGTGCTACTGATGCCAATTATCTGCAAAATTGTCTCGTAAGCAGTCCAAGTAGTTGAGCTAAATTTCTTCTTTACAATCAAATGACAATAGAAACGGATTAGCCATATGAAAGTTAAATGCAAGCCTGTTGTCAAATTCAAGATGTTTAAGCAATGAATCAAAGAACTATGCTCGTTTCGGTACAAGATAACGAGGATGCTTCTCGAATCTCAACTAATAATATGAATGTCATGTCTGTATCAGCTTACATGCCGCATTTGAGCCTACTGTATGCCAACATATCAGATGAACAAAAGAAGCAAGCAAAAGAACTAGCAGAGAAGCTGGACGAAGCCATTAATGGCCTGAGCTTCCCCATCACTCGTCTTGCACTATACAAAACAGACACTGGAGATGAAACTCTGAAGTCCTGGGAGAAAATTGCAGAACAGGATCTTCCTTCAAGTTAATAAGCTTCTGTTTATATCTATACACCCCATGAACACTGTTCTTTTGGACAATGTCTGTACTCCTCTGTACTTGTTAACTGGTAAAAAAATAAATGTCAGCTGAAGGCATTACTATTTTATTCTTGTAAAAGAGAATTAGTTTATTATCTAATATAAATTATAGACAAATTTAAATCTTGATTGTGTTTTCAATAAATTGATGAATTGATTTAGAAAGTTG

mRNA sequence

TATCCCATTTCTTCTCCGGTTGCTGTTGCTTCCAATGTTCTCAATTCTGCTGCTTTAATGGCCACAACTCACAAAACCCAGGTTTTGTTTATTTGAAACTGACCCACTTCTAAATATGGACGCTTTGACCACTACTCTTTGCAAGTCCATCGAAGCTTTAGGGCGCGGTTTTGATGTCACCGCCGATATTCGTCTTCTTTACTGCAAGGGAACACCAGGGTCGAGGCTGGTTCACCTCAATGATACCCACACCAGGGATCTTGTTCTCTCTGATGGGCTTGTGGTTCTCAATGTGCCTGATGATGTTCAGTGTTCTTCAGAATCCAGGGTAACCGAAAACCTCCCTGTTTGCAGCTTCCACAAGGTGAATTCCCAGCTGTTCTTTCAATTGGGTCTTGTTTCTTTTTGCTTATGATTGACCCCTTTTGCCCCTTCTTGAACTTCCCTTCCTGAATGCTTGTTGATTCAAATGTCAGTTGAGTTTAAATCGGTAGAGCATGGGCTCCTGAACAAACTAACCTGCAAAGAAAAGAGCCCTTTTGTCCATCACTTCAATTCAGCTTGATGGGTCCGAAGCTTCAGATTAGCCCGATCAGGTATTCGCCATCTCCATTATTCTACTGGCTTCAAAATGAGTGTGACCTTGTTAAATCTAATGGTTCTGCTGATGAAGTAGATCACAGTTGGCCGTAAACCTGTAACTGGTCTTAGGCTCAACCTTGAAGGCAGCAAGCAGAATCGACTTGCTATCCATCTCCAACATCTGGTGTCTCTGCCAAAAATTCTCCAACCCCATTGGGACTCACATGTTGCCATAGGTGCCCTTAAATGGCATGGCCCTGAGGAGCAGGACAGCAGGTGGTTTGAACCCATCAAGTGGGAAGAACTTCTCACATGTAAGTACAGCGCCCATAGAGTATACAGAAGCCAACATTGGAGACTTGTCTGGTGTTCACATCGTAACTGGAGCGCAGCTCGGTGTTTGGGACTTCGGTGCCAAAAATGTACTATATTTAAAACTTCTCTTCTCAAAGGTACCTGGCTGCACGATTCGGCGATCAGTCTGGGATCATAGCCCCTCCACCCCTGCTACTCCAATGAGATCTCATGGTGCCTCATCATCTTCCAAAACAAGAACTTCTCAAGATAATAAAAAGGAAGACAGTTCAGCCAATGCTGGAAAACTTGCAAAAGTTGTAGACTTGACAGAAATGTCCAAGGGACCTCAGGATATTCCAGGTCATTGGTTGGTTACAGGGGCTAAGCTCGGGGTCGACAAGGGAAGGATAGTTTTGCGCATCAATTACTCATTGCTGAACTACTGATCGGTCCTTGGTCGGGTATCCCTTCTACAAACTACAAACAAAAGTGGAGCATTTTTTTGCACAGAATTCATGTGTTCTTTTCTCCTCTCGTCCTACATTGTACATCTTTTTAGCTTTATAGCCATTTTTTCATGTTGATTGTCAGAAGCATTTAGTTATAGCCATGTTCTTGTTGTATTCATCACAGTTGTTCTTGTTAGACGACAAGGGCTTTGCTGCTAAATGATAATTGCAGGTAGGATTAGGACCATCCCTTTTCATTTTTGGTTCCTAGATTCCTGCCTATCCACTAAATAATATCCCGCCCATTTTAGGTCGATGCTCGAGAATAAAACGTCTATGATACAAGTATAAAGTTTATTGGATGTACATGAATAATAGAATAGATGCTTTTGAATAAAATGTGTAACACAAGTGTTTATTTATGTACACGAGTATAAAGAAAGCACTAAGATGACTTATTGCTTGGTCCCAATCTTTCAAATTGTCATTCGGGCCAACCAGAATTTATCCACCTTTTCCTAATTCTAATATTCATTTCTATCTATATTTTCTTACCCGATGCTTTAGATACAGGACGAAACCATGATTTGTTCTCTCATACGTTCATCGGCATAAGCACATTGTATTAGCTCCTCCAATAATTTCTGTCTTGAATAAAGTGATTAACATTAATATAATAAATGATTAAGATACTCATAGTGTATACAAACTTTTTAAACAAAATCAACTTTTCTATGAGACTATATCCTATGGAAAAAAAGTTCGCCACATATTTCTATGAATGGAATAACTCACTATCATAACACAACTGTAAGGATTCTCTAAGGTCGATAACTGATATAATAGTGAAGCAGAGGCATGCAGTTATGAACACGCTATCAGAGGTCACACTATTCTTACCATGCAACAAGAAACCGAAAGCTATCAGTTCATGACAGCAATGGAGGATCCTGGCCAGTTCCAATAGTATGTTTGATGTTCTTCATTTGAGCTCCAATTAAGTTCCAATCAAGGAGGTTAGGTCCTTCAGCTGATCTCGTGAGTTGCGAGGTTTATCTGCTAGTTCATTTCTATGGAGGAGATGCTTGAGGTAGTTGAAGGAAAAGTGGACTGGAAGGGAAGATCAGCTTTCAAACAAAAACATGGAGGAACTAAATCTTCTTTGCTCGCACTAGGTACGAAATCATTTACTCATCAACGTTTTTAGATGTAGTGAGCCAAAGTGTAACAGCCCAAGGCCAACACTAGCCGCATATATTGTCTTCTTTGAGCTTTCTCTTTCAAGCTTCCCTCAAAGTTTTAAAACGCGTCTATTAAAAAGAGTTTTTACACCCTTTTAAAAGAATGTTTCGTTTCTCTCTCCAATCGAGGTAGGATCTCACAGAGAAAGAGATCACAGAACGCGCTGTTTAGCAGGCTGCACCCTTGTATGCTCATTGTAATCACAACAGAGTTTCTTGTTTACCTTTTGGGTCTTTTGTTGCAGTGACATATGGTTTCGATCAAATGGCAAACTTCGCGCTTGCAGTGAACTTGACTACGTATTTCAATACTGTGATGCACTTGGAACTAGCGGATGCGGCCAACCAACTGACGAATTACATGGGAACATGTTACATTCTCTCTATTCCAATGGCTGTTCTCGCAGACACATGCTTGGGCAGAGTCAAAACTGTCATCATTTCTGGCTGTCTTGAGTTTCTGGCGCTAATATTGCTCATGATACAAGCTCACTACCCGAAGCTCAAGCCACCACTTTGCAATATATTTGATAAACAATCCCACTGCGAGACAGTTGGAGGAGCAAAAGCTGCCCTCCTCTATGTTCCTCTATATGCATTAGCTATTGGGAATGCAGGCATTAAGGCTGCATTACCACCGCATGGAGCTGATCAATTTGATGAAAAAGACCCCAAAGAGGCGATGCAAATATCCAGCTTCTTCAATCAACTGTTGCTAGGATCGTCCCTCGGTATAGCTGCTAGTTTAACTCTTGTTGTGTGGATCCAAGACAACAAAGGTTGGGACTGGGGTTTCGGGGTATCTTCTGCAGCCATCTTGTTCGGTATAGTCATGTTTGTTGCTGGATTGCCACTGTACAGAATGCACATTATTTCTGGGTCTAATGCAATCGTCCAAGTTTTACAGGTATGTCCGTGAGACAAGCAAAATTCAGAGTTGGAGGCAAATATATTGTTACTTCTGTCCAAATAAATGTTGTTTTTAGGTCTATGTTGCAGCCACTCGTAATAGAAATCTTGTCCTTCCCGAAGACCCTGCAGATCTTTATGAGATTGAAAGGGACAAAGAGGCTGTTATGGAAGAAGACTTTCTGCCTCATAGAAACATTTGCAGGTTTTGTACATGAAACTCTGTTTAAACTTTCTACTTTGACAGCCCCATAAGCATTGAATACCATGATAACTCGAATATACAGGTTTCTAGACAAAGCGGCAATTCAACAAACACCTTGTAGGCAAGTTGACACTCCCGAAGCTTCAAGCCCTTGGAAACTATGCACAGTGACCCAAGTAGAGAATGCCAAAGTAATTCTCAGCATGATACCAATTTTCTGTTGCACAGTGAATATGAGCCTCTGCTTTGCCCAGCTCCAAACATTCTCCATCCAACAGGGCCTCACCATGGACACAAAACTCACACCCTCCTTCAACATCCCTCCGCCGTCACTCACCATCATCCCAGTCTTCTTTCTCATCCTCATGGCCCCAATCTACGACAAGATTCTTGTCCCCTTTGCTCGAAAATTCACAGGCATCCCCACAGGGATCACCCCCTTGCAACGAGTAGGTGTTGGATTGGTTCTGTCCATCATCTCCATGGCCGTCGCGGCACTAGTGGAAGTGAAGCGTAAAGGCGTTGCGAGAGACCACAACATGTTGGATGCAACCCCTGTTTTGCAGCCATTGCCAATCAGCACGTTCTGGCTATCATTTCAATTCTTCATATTCGGAATCGCAGATCTCTTTGCATACGTAGGGCTTCTCGATTTCTTCTACTCCGAGGCGCCAAAAGCCCTAAAATCTGTCTCCACTTGCTTCCTTTGGAGTTCGATGGGCATGGGCTACTTCTTGAGCACCATAATTGTGAAGATTGTGAACAGTGCTACGAAAGGGATTACGAAAAATGGAGGTTGGTTGATTGGAAACAACATTAATCGGAACCATTTGAATCTCTTCTACTGGCTGCTTTCAATCTTGAGCTTCATCAACTTCTTCATCTATATATTTGCTACCCAGAAATACAATTACAGAAACCATAAACCAGCCATCTCCGCCATTGATGATAGTAGGTAGGGAGCCATCATGAGAGAAAAAAAGAAACTAAATTATGCTTAGAATTGAAAACTTTCAAGAACTATGGATCATAAATAATTTGTGTTAAATTTGTAAAATTTCTACCTTCTATGGCTGATGGTTGATTTTAGCTACTCTACATTCAGCATCAAATATGCGCATATTCTTGTAATAAACTTAGATTCCCAACTCCGTATGCACTGCCGGTGGGATAGGTTCAAGTCGCCGCCCTACTGAGCCCACATGGCCCGAAAGTCTATAACCCACGACACGTCGTCATGAAAACCTACCCAAATCTCTCACAACAGTTCAGTCAACGAACTTCAATACTCCATTTTATTTCCGTCTTCTTCTCTTCTCCGCTTCAATGGCGAACCCAGAATCCACCCCTATCCAACCCTCTGAAGGGGAGAAGAACGTGTATTCGGTCTGGGCTCTTCCTCCAGAAGATGTTACGGCCAGAATCAGGACTCTCATGAACAGCCTCAGATCCGAGTTCGGCGGGCCCCAATTCGAGCCACATATCACTGTCGTTGGGGCTATTCGTCTCACCCTTGACGATGCCCTAAACAAATTCCGCTCGGCTTGCGAGGGGCTTAAGGCTTATCAAGCCACCGTCGATTGTGTATCTACCGGAACCTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCATTGAGGTGGTGGAGACTAGTTCACATTGCTGTGGACATTTTGGTTACAAGAACTCTACCCCTTACATGCCGCATTTGAGCCTACTGTATGCCAACATATCAGATGAACAAAAGAAGCAAGCAAAAGAACTAGCAGAGAAGCTGGACGAAGCCATTAATGGCCTGAGCTTCCCCATCACTCGTCTTGCACTATACAAAACAGACACTGGAGATGAAACTCTGAAGTCCTGGGAGAAAATTGCAGAACAGGATCTTCCTTCAAGTTAATAAGCTTCTGTTTATATCTATACACCCCATGAACACTGTTCTTTTGGACAATGTCTGTACTCCTCTGTACTTGTTAACTGGTAAAAAAATAAATGTCAGCTGAAGGCATTACTATTTTATTCTTGTAAAAGAGAATTAGTTTATTATCTAATATAAATTATAGACAAATTTAAATCTTGATTGTGTTTTCAATAAATTGATGAATTGATTTAGAAAGTTG

Coding sequence (CDS)

ATGGCGAACCCAGAATCCACCCCTATCCAACCCTCTGAAGGGGAGAAGAACGTGTATTCGGTCTGGGCTCTTCCTCCAGAAGATGTTACGGCCAGAATCAGGACTCTCATGAACAGCCTCAGATCCGAGTTCGGCGGGCCCCAATTCGAGCCACATATCACTGTCGTTGGGGCTATTCGTCTCACCCTTGACGATGCCCTAAACAAATTCCGCTCGGCTTGCGAGGGGCTTAAGGCTTATCAAGCCACCGTCGATTGTGTATCTACCGGAACCTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCATTGAGGTGGTGGAGACTAGTTCACATTGCTGTGGACATTTTGGTTACAAGAACTCTACCCCTTACATGCCGCATTTGAGCCTACTGTATGCCAACATATCAGATGAACAAAAGAAGCAAGCAAAAGAACTAGCAGAGAAGCTGGACGAAGCCATTAATGGCCTGAGCTTCCCCATCACTCGTCTTGCACTATACAAAACAGACACTGGAGATGAAACTCTGAAGTCCTGGGAGAAAATTGCAGAACAGGATCTTCCTTCAAGTTAA

Protein sequence

MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGYKNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS

Homology

[Close]

BLAST of Cp4.1LG10g05600 vs. ExPASy Swiss-Prot
Match: O04147 (Cyclic phosphodiesterase OS=Arabidopsis thaliana OX=3702 GN=At4g18930 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.7e-55
Identity = 102/173 (58.96%), Postives = 129/173 (74.57%), Query Frame = 0


Query: 13  EGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRS 72
           E +K+VYSVWALP E+   R + LM +LRSEF GP+F PH+TV  +  LT D+A   F S
Sbjct: 3   EVKKDVYSVWALPDEESEPRFKKLMEALRSEFTGPRFVPHVTVAVSAYLTADEAKKMFES 62

Query: 73  ACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGYKNSTPYMPHLSL 132
           AC+GLKAY ATVD VSTGTFF+QCVFLL+  T EV+E   HC  HF    +TPYMPHLSL
Sbjct: 63  ACDGLKAYTATVDRVSTGTFFFQCVFLLLQTTPEVMEAGEHCKNHFNCSTTTPYMPHLSL 122

Query: 133 LYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIA 186
           LYA +++E+KK A+E A  LD +++GLSF + RLAL KTDT D+TL++WE +A
Sbjct: 123 LYAELTEEEKKNAQEKAYTLDSSLDGLSFRLNRLALCKTDTEDKTLETWETVA 175

[Close]

BLAST of Cp4.1LG10g05600 vs. NCBI nr
Match: XP_023522563.1 (cyclic phosphodiesterase-like [Cucurbita pepo subsp. pepo] >XP_023543944.1 cyclic phosphodiesterase-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397 bits (1019), Expect = 1.65e-139
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60
           MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR
Sbjct: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGY 120
           LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGY 120

Query: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180
           KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS
Sbjct: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180

Query: 181 WEKIAEQDLPSS 192
           WEKIAEQDLPSS
Sbjct: 181 WEKIAEQDLPSS 192

[Close]

BLAST of Cp4.1LG10g05600 vs. NCBI nr
Match: XP_023543945.1 (cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394 bits (1011), Expect = 2.74e-138
Identity = 190/192 (98.96%), Postives = 191/192 (99.48%), Query Frame = 0


Query: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60
           MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR
Sbjct: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGY 120
           LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPT +VVETSSHCCGHFGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGY 120

Query: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180
           KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS
Sbjct: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180

Query: 181 WEKIAEQDLPSS 192
           WEKIAEQDLPSS
Sbjct: 181 WEKIAEQDLPSS 192

[Close]

BLAST of Cp4.1LG10g05600 vs. NCBI nr
Match: KAG6581386.1 (Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391 bits (1005), Expect = 2.25e-137
Identity = 189/192 (98.44%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60
           MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR
Sbjct: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGY 120
           LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPT +VVETSSHCCGHFGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTKVVETSSHCCGHFGY 120

Query: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180
            NSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS
Sbjct: 121 NNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180

Query: 181 WEKIAEQDLPSS 192
           WEKIAEQDLPSS
Sbjct: 181 WEKIAEQDLPSS 192

[Close]

BLAST of Cp4.1LG10g05600 vs. NCBI nr
Match: KAG7034670.1 (Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 388 bits (997), Expect = 3.74e-136
Identity = 188/192 (97.92%), Postives = 189/192 (98.44%), Query Frame = 0


Query: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60
           MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR
Sbjct: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGY 120
           LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPT +VVETSSHCCGHFG 
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGC 120

Query: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180
            NSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS
Sbjct: 121 NNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180

Query: 181 WEKIAEQDLPSS 192
           WEKIAEQDLPSS
Sbjct: 181 WEKIAEQDLPSS 192

[Close]

BLAST of Cp4.1LG10g05600 vs. NCBI nr
Match: XP_022978766.1 (cyclic phosphodiesterase-like [Cucurbita maxima])

HSP 1 Score: 388 bits (996), Expect = 5.31e-136
Identity = 187/192 (97.40%), Postives = 189/192 (98.44%), Query Frame = 0


Query: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60
           MANPES  IQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR
Sbjct: 1   MANPESPTIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGY 120
           LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPT +VVETSSHCCGHFGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGY 120

Query: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180
           KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFP+TRLALYKTDTGDETLKS
Sbjct: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPVTRLALYKTDTGDETLKS 180

Query: 181 WEKIAEQDLPSS 192
           WEKIAEQDLPSS
Sbjct: 181 WEKIAEQDLPSS 192

[Close]

BLAST of Cp4.1LG10g05600 vs. ExPASy TrEMBL
Match: A0A6J1INY2 (cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111478628 PE=4 SV=1)

HSP 1 Score: 388 bits (996), Expect = 2.57e-136
Identity = 187/192 (97.40%), Postives = 189/192 (98.44%), Query Frame = 0


Query: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60
           MANPES  IQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR
Sbjct: 1   MANPESPTIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGY 120
           LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPT +VVETSSHCCGHFGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGY 120

Query: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180
           KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFP+TRLALYKTDTGDETLKS
Sbjct: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPVTRLALYKTDTGDETLKS 180

Query: 181 WEKIAEQDLPSS 192
           WEKIAEQDLPSS
Sbjct: 181 WEKIAEQDLPSS 192

[Close]

BLAST of Cp4.1LG10g05600 vs. ExPASy TrEMBL
Match: A0A6J1EGC1 (cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433116 PE=4 SV=1)

HSP 1 Score: 385 bits (989), Expect = 2.90e-135
Identity = 188/192 (97.92%), Postives = 189/192 (98.44%), Query Frame = 0


Query: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60
           MANPESTPIQPSEGEKNVYSVWALPPEDV ARIRTLMNSLRSEFGGPQFEPHITVVGAIR
Sbjct: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVMARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGY 120
           LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPT +VVETSSHCCGHFGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGY 120

Query: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180
           KN TPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS
Sbjct: 121 KN-TPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180

Query: 181 WEKIAEQDLPSS 192
           WEKIAEQDLPSS
Sbjct: 181 WEKIAEQDLPSS 191

[Close]

BLAST of Cp4.1LG10g05600 vs. ExPASy TrEMBL
Match: A0A1S3AYZ1 (cyclic phosphodiesterase-like OS=Cucumis melo OX=3656 GN=LOC103484419 PE=4 SV=1)

HSP 1 Score: 333 bits (853), Expect = 1.63e-114
Identity = 160/192 (83.33%), Postives = 173/192 (90.10%), Query Frame = 0


Query: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60
           M NPES  IQ SE E NVYSVWALPPEDV+ARI  LMNSLRSEFGGPQFEPHITVVGAIR
Sbjct: 1   MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGY 120
           LT +DALNKF +AC+G+KAYQATVD VSTGTFFYQCVFLLIHPT EVVETSSH C HFG+
Sbjct: 61  LTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVETSSHFCKHFGF 120

Query: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180
           KNSTPYMPH+SLLYA+ISDE+KKQAKE+A+KLDEA+NGL FPITRLAL+KTDT DETLKS
Sbjct: 121 KNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKS 180

Query: 181 WEKIAEQDLPSS 192
           WEKI E DL SS
Sbjct: 181 WEKIVEHDLSSS 192

[Close]

BLAST of Cp4.1LG10g05600 vs. ExPASy TrEMBL
Match: A0A6J1EEQ8 (cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433501 PE=4 SV=1)

HSP 1 Score: 329 bits (844), Expect = 3.57e-113
Identity = 158/192 (82.29%), Postives = 172/192 (89.58%), Query Frame = 0


Query: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60
           MANP S PI+P EGE  +YSVWALPPEDV  +I +LM+SLRSEFGGP+FEPHITVVGAIR
Sbjct: 1   MANPNSAPIEPCEGE--LYSVWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIR 60

Query: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGY 120
           LT  DALNKFRSACEG+KAYQATVD VS GT FYQCVFLLIHPT EVV+ SSHCCGHFGY
Sbjct: 61  LTPQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCGHFGY 120

Query: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180
            NSTPYMPHLSLLYANISDE KK+AKE+A+KL+EA+NGL  P+TRLALYKTDTGDETLKS
Sbjct: 121 NNSTPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKS 180

Query: 181 WEKIAEQDLPSS 192
           WEKIAE DLPSS
Sbjct: 181 WEKIAEHDLPSS 190

[Close]

BLAST of Cp4.1LG10g05600 vs. ExPASy TrEMBL
Match: A0A6J1KNB2 (cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111496852 PE=4 SV=1)

HSP 1 Score: 325 bits (834), Expect = 1.19e-111
Identity = 157/192 (81.77%), Postives = 171/192 (89.06%), Query Frame = 0


Query: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60
           MANP S PI+P EGE  +YSVWALPPEDV  +I +LM+SLRSEFGGP+FEPHITVVGAIR
Sbjct: 1   MANPNSAPIEPCEGE--LYSVWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIR 60

Query: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGY 120
           LT  DALNKFRSACEG+KAYQATVD VS GT FYQCVFLLIHPT EVV+ SSHCCGHFG 
Sbjct: 61  LTPQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCGHFGC 120

Query: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180
            NSTPYMPHLSLLYANISDE KK+AKE+A+KL+EA+NGL  P+TRLALYKTDTGDETLKS
Sbjct: 121 NNSTPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPLTRLALYKTDTGDETLKS 180

Query: 181 WEKIAEQDLPSS 192
           WEKIAE DLPSS
Sbjct: 181 WEKIAEHDLPSS 190

[Close]

BLAST of Cp4.1LG10g05600 vs. TAIR 10
Match: AT4G18930.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 216.5 bits (550), Expect = 1.9e-56
Identity = 102/173 (58.96%), Postives = 129/173 (74.57%), Query Frame = 0


Query: 13  EGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRS 72
           E +K+VYSVWALP E+   R + LM +LRSEF GP+F PH+TV  +  LT D+A   F S
Sbjct: 3   EVKKDVYSVWALPDEESEPRFKKLMEALRSEFTGPRFVPHVTVAVSAYLTADEAKKMFES 62

Query: 73  ACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGYKNSTPYMPHLSL 132
           AC+GLKAY ATVD VSTGTFF+QCVFLL+  T EV+E   HC  HF    +TPYMPHLSL
Sbjct: 63  ACDGLKAYTATVDRVSTGTFFFQCVFLLLQTTPEVMEAGEHCKNHFNCSTTTPYMPHLSL 122

Query: 133 LYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIA 186
           LYA +++E+KK A+E A  LD +++GLSF + RLAL KTDT D+TL++WE +A
Sbjct: 123 LYAELTEEEKKNAQEKAYTLDSSLDGLSFRLNRLALCKTDTEDKTLETWETVA 175

[Close]

BLAST of Cp4.1LG10g05600 vs. TAIR 10
Match: AT4G18940.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 174.5 bits (441), Expect = 8.3e-44
Identity = 86/199 (43.22%), Postives = 127/199 (63.82%), Query Frame = 0


Query: 1   MANPESTPIQP------SEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHIT 60
           M    +TP+QP       E EK +Y++WA+P +DV  R++ LM  LRSEFGGP F+PH+T
Sbjct: 1   MTEENATPLQPPQTQEDDEEEKAMYAIWAVPEDDVEDRLQRLMEGLRSEFGGPAFDPHLT 60

Query: 61  VVGAI--RLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSS 120
           +VG    +LT  +A   F+SACEG K Y ATVD VS GT ++QC+++ +  T+EV+  + 
Sbjct: 61  LVGPFPYKLTASEAKRMFKSACEGFKVYPATVDQVSAGTSYFQCLYVSLRHTVEVMNAAG 120

Query: 121 HCCGHFGYKNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTD 180
           H   HF       Y+PH+S+LY ++++ +KK+A E A  LD +++GL+F I R+AL+ TD
Sbjct: 121 HFMAHFKPFTGKFYVPHMSILYGDLTEREKKKALEKAYTLDSSLDGLNFKINRVALWITD 180

Query: 181 TGDETLKSWEKIAEQDLPS 192
                + SW K+ E  L S
Sbjct: 181 A---DVGSWVKVDEHTLIS 196

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g05600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04147	2.7e-55	58.96	Cyclic phosphodiesterase OS=Arabidopsis thaliana OX=3702 GN=At4g18930 PE=1 SV=1	[more]

BLAST of Cp4.1LG10g05600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522563.1	1.65e-139	100.00	cyclic phosphodiesterase-like [Cucurbita pepo subsp. pepo] >XP_023543944.1 cycli...	[more]
XP_023543945.1	2.74e-138	98.96	cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG6581386.1	2.25e-137	98.44	Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7034670.1	3.74e-136	97.92	Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022978766.1	5.31e-136	97.40	cyclic phosphodiesterase-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG10g05600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1INY2	2.57e-136	97.40	cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111478628 PE=4 S...	[more]
A0A6J1EGC1	2.90e-135	97.92	cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433116 PE=4...	[more]
A0A1S3AYZ1	1.63e-114	83.33	cyclic phosphodiesterase-like OS=Cucumis melo OX=3656 GN=LOC103484419 PE=4 SV=1	[more]
A0A6J1EEQ8	3.57e-113	82.29	cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433501 PE=4...	[more]
A0A6J1KNB2	1.19e-111	81.77	cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111496852 PE=4 S...	[more]

BLAST of Cp4.1LG10g05600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18930.1	1.9e-56	58.96	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]
AT4G18940.1	8.3e-44	43.22	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 135..158
None	No IPR available	GENE3D	3.90.1140.10	Cyclic phosphodiesterase	coord: 12..191 e-value: 3.6E-55 score: 188.4
None	No IPR available	PANTHER	PTHR28141:SF4	CYCLIC PHOSPHODIESTERASE-LIKE	coord: 15..189
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PIRSF	PIRSF017903	CPDase_plant	coord: 1..191 e-value: 1.8E-70 score: 234.5
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PFAM	PF07823	CPDase	coord: 20..181 e-value: 3.5E-12 score: 46.4
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PANTHER	PTHR28141	2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE	coord: 15..189
IPR009097	Cyclic phosphodiesterase	SUPERFAMILY	55144	LigT-like	coord: 16..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g05600.1	Cp4.1LG10g05600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009187	cyclic nucleotide metabolic process
molecular_function	GO:0004113	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
molecular_function	GO:0004112	cyclic-nucleotide phosphodiesterase activity