Cp4.1LG09g09870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g09870
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	WD repeat-containing protein 74-like
Location	Cp4.1LG09: 8665851 .. 8670309 (-)
RNA-Seq Expression	Cp4.1LG09g09870
Synteny	Cp4.1LG09g09870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTCCTGAGTTCTGAGAAAGAATTTCCGAAGTTTTCTTCCCTTTTGATATATTGTATTCTTCATTGTTTAGTAGGGGCTATACTGACCTATTACTGGGTTGATGATGAAATGTCTGTTGATCGGCCGATTATGTCTTTCATTTCTTTCATCTATGGTCAATTCAAATTCTTCATCATTTTTAGTCACCAAATTACTTCCTTTTATTTTTTATTGCAGTTACTAGCTGTTGCTCGAAAAAATGGACTGGTAAGTTGCTTGTTCAGACTTCTAGTGTAGTGAATCCTGCTCACATTGATTGAACTTAAAAATTTAAATATACTAATGCTCTTTTTGTAAAATCATGTTCCTGCCGTATACTCCAGATTGAAGTTCTTAATCCATTGAATGGCAATCTTCATGTTGCAATTTCGGACAATACTGATACTTCTCCACCAAAAGATGATGCTATTATTGGAATGCATTTATTTTCAAAAGATGAATCGGCGTTGGCGTCTAGGTTATGGATCAATTTATAATTTATGAGCATGTTATTTTGTAATTTGATAAAAGTGCAAAAGGTATCATCGTGTTGTTAATGATGAAATATTAAAATTTTCTTAAACTAGCTGGCTACTTCAACAAGACATCTATGCTGAATTCCTCTTAGTTTGATCATTCATTTTTAGGCGTTGCACCTTGCTTTCGTGTACAAAAAAAGGAAATGCGAGCATGAGGGCAATTGATTTTTCTAGCTCATCTTCAGACGATATCTCTACCAATCTTGTAAAAACGTGGAAAGTATGTGGTTCAGGTGATGTTTTGTGCTCTAAAGTCGATGGAAGTGAAACCCATGCATTGTTTGGAGGGTGAGTTAAGATCATGATTGAATTTAAGTATTATCTATACATTGGCACTAACAACCTTTACCTTGTATGCGCAGGAAGGGTGTTGAAGTCAATACATGGAATCTGGAACAGTGTACTAAGATTTGGACAGCAAAAGCAGTATGCTTTCAAGTTCTCCTTTGCATGTTTGTACAAAGCGATCAACATATTTCTACAGAATGTTTTTTGATTTCCTTTTGAAACATTTTGTTTTATTCAGCCAAAGAAGAACAGTCTTGGTATTTTCACACCAACTTGCTTCACATCCGTGACATTTCTTAGTAAAGATGACCATCGTAAATTTGCAGCTGGTACCAACAACCATCAGGTAATTCATAACAGTTTCTCATGGTATTAGTAATACAAGTTACAGAATAGGAAATAATAACACAAGTTGTAGAATTAACGGGAGTTTTAGAGAATTGAATAAATAAGTGTCTGATGTGGTCTTGGTTGCTATTTAAGTTTAATAATACTTCATTTTGAGCCTTTCAGAAAATTATTGATATCTGATTATCGGTGAAACGTTACAACTCTTGTACAATGTAACCTCTTTATTTTTAGTTTACACATCCATTATAAAAACCATTTATTTTGATGTATGAATCATATTACCGCTCTTTACTTCTTAAAACTATTTGTTTTTATTATTATTTTATGGGGGTGGGGGATTGGTCTTCTTTCTCATTCTATAACTGGAGTTTCTGATTAACCAACTCAGGTTCGATTGTATGACATCTCTGCTCAGAAGAGACCTGTTATCTCGTTTGATTTTCGAGAGACTCCTATTAAAGCCTTGGCTGAAGATGTAGATGGTAACACAATATTTGTGGGGAATGCAACTGGTGATCTTGCATCCTTTGATATTCGCAATGGTAAAATTTGTTGTGCTTGAGACAATGTTCTTTCTGATTTAATATTCTGGGCGTTCTATATTTTCATACAGTACTCTTGTTTCAGAAAAGATTGGCTGTTTTACGGGTTGGATCCCAATTGATGAGTACTACCCCAATAGTTTATTTAAAAGTTCTCATTCCACTGCATATTTTAGCATGCTTGAGATGTAGGTGATACAGTCATGGTGTCTTAAATATATAAATTATGTATGAGAATGGTGTACCAAGAAGAGTAGTCTTGACTGACAGCTACCTTCATTAGAAAGGAGAAAACAAATATTTTTCTTTAGACCAGGAATTCCCAGTAGCGTTCAAACTTTTTATTTCACCTTTATTCTGTCTGTTGGGAGCTATTTGATTGTTCCTTGATTGTCGTGAGTTTTTATTGATTTTGTTGGACTATCTCTATGATCTGTAAATAGCAGTTGATTAAAGTTTTTATTAATGGAGTAAATTTATGTGCCTTATTTTCTTTGCTTGACTCGTTTCTCACAGGAAAGCTATTGGGTTGCTTCTTGGGGAAATGTTCTGGCAGCATAAGGTCCATCGCCAGGCATCCAGAGTTCCCGATCATTGCATCATGTGGTGGGATATATTTTCCAATATGACAATCATCTAGCATTTCTCTGTCTGCTATACACATGGAAATCTTGTATTTTTACTAGGATTGTGTCTCTTTTTACATGTTTTGAAATATTCATATAAAAAAAAATCCTCTGCACAACGAGCCATACTCGTCTTTTATGCTAAAAAACTAGCATTTTTAGTACTTAATGTAAGTGGGTTGGTTAGGAAGAAACAGAATAATTAGTGTCACTTCAAACCTACCTATAGGCAATTCATTAAGTTGTGTTGAATCCAGTGGATAATGGAAGGATTAAAGGAGCCAAGATACAGTCAATAATTTGAGTGGCATCAATTCCATGAATGTATCCGGACTGCACTAAATATTAACTTTTTCCTTTTCTTCTTAGCTAGATTTATAAACTCAGATATACAAAACTGAGAATCAGAATAAGAACATATCATTTTCTTCAATGTGGAATCTACTTATGAGTGATGTTGAAATCTTTTTGCAGGACTTGATAGTTATGTTCGCTTCTGGGATATAAAGACAAGGCAACTTCTGTCTGCGGTAAGTTTTCATAATTCTAGTAAATAATAGGTTGTTTAGACGCATCATTCAGAATGAATGATGTAGAAGCAAGTTTTTCAGAAAATACTGGAAAGGACATTTTAGAAGAAGATAATGGTAGTCAATCTTATGGACTAATTTGCACCATTGTTGTGATTTAATTTATTGACTCGGAGCTATGAAGAAAAAAAAAAAAAAAGGCCATTTAGAGACAAATATAAGGTCTGATGGTTTAAAAGTATAGTTTAGAATTATCTTCCTAGTTGTTTAGAAGTTGTGCTGTTTAGATATGCATCCTGTCGGTCGATCACCAACATCCAATTTTGCAGTTGTTTTCTACAGAAGGGAGAATAATGAAAGGAAAATTTACTGTTCGAGTACAAAATTCTAAGCATGATCACTGATCTACTTAATAGCTTCCTAGAAAATGTAATGGGACCCTATGCATTAAAGTGGTTATATTTGATGTAGCCTACTGGATAGTACTCTTACTAAACTGAAGCCGAGTATTTCCAGCACTATATTCACATAATTCAGCTGGTACTTGCGTAAATATATTGCATGTTTGTAAAATCAGGGAGTCTATTTAATAATATGACAGAAAGAGAGAAAAAAAATTGCGTTTGATGCATAAATGTAAGCTGGGACAATATATCATATGATTATATTTGTCTTCATTTGCTTGCAGGTATTCCTAAAGCAGCATCTTAATGGTGTTGTCTTCGATTCCCATTTTGTTGGAGAAGGTTAGATTTGCTGATCCACACTTATCAAATTAATGTTTCGTAACAAAATCATCTTTCTATGTTGAGCTTGTTTTTAGGTTGTGCTGCATTAGTGCATTTGATTGACTTCCAACATAACTCTCCTAGGCTCCAAATGACTGATTGAAAGCCTATGATCTGTTCATTTGTTCTTTATCTCATTCATATCTGTCTCAGCAGACACAACACACTCTGCAGTAGAGTCAATCCAACAGGACATAGAGATAGGCCAAACCGTTAGCGAGGAGGAACACACGCCTCAGAAAAGAAAAAAGGCATCGAAAGAAGACGGTGAAGGCAAAAAGAGGAAGGGTGCAAGCAAAGAAAATAAAAAAAGCAAAAAGAAGTTGCATGGCGAAACCGAAAGTAAGCAGAGGTAGGAGTTCAAAATCTGATATTCTTTGTTCTTGGCAAAGCAGAAAGGTTAGTTCATGTTCTGATCTATTCAGTCTGCAGAGACTGTGGGAGATTAGAGGGTAAATGATAAAAGTTATTTATCTCACCAATGTATTAAATTTTGGCCCATATCATGATTTTTATGCGGGATGAAGTAGGTATGATTCCATTCGAAGTAGTTCAAGCACGTTCGACTCAAGTATCCCGTGTCAAATTTTATAATACTAGTAGTTAGAAGTATTTGAATATGATACCTATAATGTTTTAGATTAGCCCTCCATGTTTGAACTTTGTAACTTATGAGTTCGTCAATGAACAATTCAGTAAGTTCTTGAAATATTGTTTTTACTTCCTCCACAAAGTAAAATATAACACCTATTTGTATCTGTGAGTGCAATG

mRNA sequence

ATGAAGTTCCTGAGTTCTGAGAAAGAATTTCCGAAGTTTTCTTCCCTTTTGATATATTGTATTCTTCATTGTTTAGTAGGGGCTATACTGACCTATTACTGGGTTGATGATGAAATGTCTGTTGATCGGCCGATTATGTCTTTCATTTCTTTCATCTATGGTCAATTCAAATTCTTCATCATTTTTAGTCACCAAATTACTTCCTTTTATTTTTTATTGCAGTTACTAGCTGTTGCTCGAAAAAATGGACTGATTGAAGTTCTTAATCCATTGAATGGCAATCTTCATGTTGCAATTTCGGACAATACTGATACTTCTCCACCAAAAGATGATGCTATTATTGGAATGCATTTATTTTCAAAAGATGAATCGGCGTTGGCGTCTAGGCGTTGCACCTTGCTTTCGTGTACAAAAAAAGGAAATGCGAGCATGAGGGCAATTGATTTTTCTAGCTCATCTTCAGACGATATCTCTACCAATCTTGTAAAAACGTGGAAAGTATGTGGTTCAGGTGATGTTTTGTGCTCTAAAGTCGATGGAAGTGAAACCCATGCATTGTTTGGAGGGAAGGGTGTTGAAGTCAATACATGGAATCTGGAACAGTGTACTAAGATTTGGACAGCAAAAGCACCAAAGAAGAACAGTCTTGGTATTTTCACACCAACTTGCTTCACATCCGTGACATTTCTTAGTAAAGATGACCATCGTAAATTTGCAGCTGGTACCAACAACCATCAGGTTCGATTGTATGACATCTCTGCTCAGAAGAGACCTGTTATCTCGTTTGATTTTCGAGAGACTCCTATTAAAGCCTTGGCTGAAGATGTAGATGGTAACACAATATTTGTGGGGAATGCAACTGGTGATCTTGCATCCTTTGATATTCGCAATGGAAAGCTATTGGGTTGCTTCTTGGGGAAATGTTCTGGCAGCATAAGGTCCATCGCCAGGCATCCAGAGTTCCCGATCATTGCATCATGTGGACTTGATAGTTATGTTCGCTTCTGGGATATAAAGACAAGGCAACTTCTGTCTGCGGTATTCCTAAAGCAGCATCTTAATGGTGTTGTCTTCGATTCCCATTTTGTTGGAGAAGACACAACACACTCTGCAGTAGAGTCAATCCAACAGGACATAGAGATAGGCCAAACCGTTAGCGAGGAGGAACACACGCCTCAGAAAAGAAAAAAGGCATCGAAAGAAGACGGTGAAGGCAAAAAGAGGAAGGGTGCAAGCAAAGAAAATAAAAAAAGCAAAAAGAAGTTGCATGGCGAAACCGAAAGTAAGCAGAGGTAGGAGTTCAAAATCTGATATTCTTTGTTCTTGGCAAAGCAGAAAGGTTAGTTCATGTTCTGATCTATTCAGTCTGCAGAGACTGTGGGAGATTAGAGGGTAAATGATAAAAGTTATTTATCTCACCAATGTATTAAATTTTGGCCCATATCATGATTTTTATGCGGGATGAAGTAGGTATGATTCCATTCGAAGTAGTTCAAGCACGTTCGACTCAAGTATCCCGTGTCAAATTTTATAATACTAGTAGTTAGAAGTATTTGAATATGATACCTATAATGTTTTAGATTAGCCCTCCATGTTTGAACTTTGTAACTTATGAGTTCGTCAATGAACAATTCAGTAAGTTCTTGAAATATTGTTTTTACTTCCTCCACAAAGTAAAATATAACACCTATTTGTATCTGTGAGTGCAATG

Coding sequence (CDS)

ATGAAGTTCCTGAGTTCTGAGAAAGAATTTCCGAAGTTTTCTTCCCTTTTGATATATTGTATTCTTCATTGTTTAGTAGGGGCTATACTGACCTATTACTGGGTTGATGATGAAATGTCTGTTGATCGGCCGATTATGTCTTTCATTTCTTTCATCTATGGTCAATTCAAATTCTTCATCATTTTTAGTCACCAAATTACTTCCTTTTATTTTTTATTGCAGTTACTAGCTGTTGCTCGAAAAAATGGACTGATTGAAGTTCTTAATCCATTGAATGGCAATCTTCATGTTGCAATTTCGGACAATACTGATACTTCTCCACCAAAAGATGATGCTATTATTGGAATGCATTTATTTTCAAAAGATGAATCGGCGTTGGCGTCTAGGCGTTGCACCTTGCTTTCGTGTACAAAAAAAGGAAATGCGAGCATGAGGGCAATTGATTTTTCTAGCTCATCTTCAGACGATATCTCTACCAATCTTGTAAAAACGTGGAAAGTATGTGGTTCAGGTGATGTTTTGTGCTCTAAAGTCGATGGAAGTGAAACCCATGCATTGTTTGGAGGGAAGGGTGTTGAAGTCAATACATGGAATCTGGAACAGTGTACTAAGATTTGGACAGCAAAAGCACCAAAGAAGAACAGTCTTGGTATTTTCACACCAACTTGCTTCACATCCGTGACATTTCTTAGTAAAGATGACCATCGTAAATTTGCAGCTGGTACCAACAACCATCAGGTTCGATTGTATGACATCTCTGCTCAGAAGAGACCTGTTATCTCGTTTGATTTTCGAGAGACTCCTATTAAAGCCTTGGCTGAAGATGTAGATGGTAACACAATATTTGTGGGGAATGCAACTGGTGATCTTGCATCCTTTGATATTCGCAATGGAAAGCTATTGGGTTGCTTCTTGGGGAAATGTTCTGGCAGCATAAGGTCCATCGCCAGGCATCCAGAGTTCCCGATCATTGCATCATGTGGACTTGATAGTTATGTTCGCTTCTGGGATATAAAGACAAGGCAACTTCTGTCTGCGGTATTCCTAAAGCAGCATCTTAATGGTGTTGTCTTCGATTCCCATTTTGTTGGAGAAGACACAACACACTCTGCAGTAGAGTCAATCCAACAGGACATAGAGATAGGCCAAACCGTTAGCGAGGAGGAACACACGCCTCAGAAAAGAAAAAAGGCATCGAAAGAAGACGGTGAAGGCAAAAAGAGGAAGGGTGCAAGCAAAGAAAATAAAAAAAGCAAAAAGAAGTTGCATGGCGAAACCGAAAGTAAGCAGAGGTAG

Protein sequence

MKFLSSEKEFPKFSSLLIYCILHCLVGAILTYYWVDDEMSVDRPIMSFISFIYGQFKFFIIFSHQITSFYFLLQLLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLLSCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEVNTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISAQKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAVESIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR

Homology

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BLAST of Cp4.1LG09g09870 vs. ExPASy Swiss-Prot
Match: Q58D06 (WD repeat-containing protein 74 OS=Bos taurus OX=9913 GN=WDR74 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 8.2e-20
Identity = 89/301 (29.57%), Postives = 144/301 (47.84%), Query Frame = 0


Query: 132 TLLSCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHAL-FGGK 191
           TL++C   G   +       +SSD +    V      G G V   + D +  H +  GGK
Sbjct: 99  TLITCVDSGILRVWTDKDKEASSDPVLELRV------GPG-VCRMRQDPARPHIVATGGK 158

Query: 192 GVEVNTWNLEQCTK-IWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRL 251
              +  W+L+   + ++ AK  + + L +  P     + FL   + +K    T  HQVR+
Sbjct: 159 ENALKVWDLQGSEEPLFRAKNVRNDWLDLRVPVWDQDIQFL--PESQKLVTCTGYHQVRV 218

Query: 252 YD-ISAQKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKC 311
           YD  S Q+RPV+   + E P+ A+    +GN++ VGN  G LA  D+R G+LLGC  G  
Sbjct: 219 YDPASPQRRPVLEATYGEYPLTAVTLTPEGNSVIVGNTHGQLAEIDLRQGRLLGCLKG-L 278

Query: 312 SGSIRSIARHPEFPIIASCGLDSYVRFWDIKT-RQLLSAVFLKQHLNGVVFDSHFVGEDT 371
           +GS+R +  HP  P++ASCGLD  +R   I+  R L   V+LK  LN ++      G D 
Sbjct: 279 AGSVRGLQCHPSKPLLASCGLDRVLRIHRIRNPRGLEHKVYLKSQLNCLLLS----GRDN 338

Query: 372 THSAVESIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETE 429
                +  Q+  ++    +E +      + A+K      ++   + + ++ KKK  G T 
Sbjct: 339 WEDEPQEPQEPNKVPSEDTETDELWASLEAAAKRKLPDWEQTQGALQARRRKKKRPGSTS 385

[Close]

BLAST of Cp4.1LG09g09870 vs. ExPASy Swiss-Prot
Match: Q6RFH5 (WD repeat-containing protein 74 OS=Homo sapiens OX=9606 GN=WDR74 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.1e-19
Identity = 91/305 (29.84%), Postives = 144/305 (47.21%), Query Frame = 0


Query: 126 LASRRCTLLSCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHA 185
           LA    TL++C   G   +       +SSD +    V      G G V   + D +  H 
Sbjct: 93  LAQADGTLITCVDSGILRVWHDKDKDTSSDPLLELRV------GPG-VCRMRQDPAHPHV 152

Query: 186 L-FGGKGVEVNTWNLEQCTK-IWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTN 245
           +  GGK   +  W+L+   + ++ AK  + + L +  P     + FL     +K    T 
Sbjct: 153 VATGGKENALKIWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDIQFL--PGSQKLVTCTG 212

Query: 246 NHQVRLYD-ISAQKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLG 305
            HQVR+YD  S Q+RPV+   + E P+ A+     GN++ VGN  G LA  D+R G+LLG
Sbjct: 213 YHQVRVYDPASPQRRPVLETTYGEYPLTAMTLTPGGNSVIVGNTHGQLAEIDLRQGRLLG 272

Query: 306 CFLGKCSGSIRSIARHPEFPIIASCGLDSYVRFWDIKT-RQLLSAVFLKQHLNGVVFDSH 365
           C  G  +GS+R +  HP  P++ASCGLD  +R   I+  R L   V+LK  LN ++    
Sbjct: 273 CLKG-LAGSVRGLQCHPSKPLLASCGLDRVLRIHRIQNPRGLEHKVYLKSQLNCLLLS-- 332

Query: 366 FVGEDTTHSAVESIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKK 425
             G D      +  Q+  ++    +E +      + A+K    G ++   + + ++ KKK
Sbjct: 333 --GRDNWEDEPQEPQEPNKVPLEDTETDELWASLEAAAKRKLSGLEQPQGALQTRRRKKK 383

Query: 426 LHGET 427
             G T
Sbjct: 393 RPGST 383

[Close]

BLAST of Cp4.1LG09g09870 vs. ExPASy Swiss-Prot
Match: Q8VCG3 (WD repeat-containing protein 74 OS=Mus musculus OX=10090 GN=Wdr74 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.1e-19
Identity = 92/299 (30.77%), Postives = 141/299 (47.16%), Query Frame = 0


Query: 126 LASRRCTLLSCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHA 185
           LA    TL++C   G   +   +   +SSD +    V      G G V   + D + TH 
Sbjct: 93  LAQADGTLITCVDSGILRVWCENDKEASSDPLLELKV------GPG-VCRMRQDPTHTHV 152

Query: 186 LFG-GKGVEVNTWNLEQCTK-IWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTN 245
           +   GK   +  W+L+   + ++ AK  + + L +  P       FL     +K    T 
Sbjct: 153 VATCGKENALKVWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDTQFL--PGSQKLVTCTG 212

Query: 246 NHQVRLYD-ISAQKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLG 305
            HQVR+YD +S Q+RPV+   + E P+ A+    +GN++ VGN  G LA  D R G+LLG
Sbjct: 213 YHQVRVYDPVSPQRRPVLEATYGEYPLTAMTLTPEGNSVIVGNTHGQLAEIDFRQGRLLG 272

Query: 306 CFLGKCSGSIRSIARHPEFPIIASCGLDSYVRFWDIKT-RQLLSAVFLKQHLNGVVFDSH 365
           C  G  +GS+R +  HP  P++ASCGLD  +R   I+  R L   V+LK  LN ++    
Sbjct: 273 CLKG-LAGSVRGLQCHPSKPLLASCGLDRVLRIHRIRNPRGLEHKVYLKSQLNCLLLSGR 332

Query: 366 FVGEDTTHSAVESIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKK 421
              ED      E  Q   E  +T   +E        A ++  +  + +GA +  KK K+
Sbjct: 333 DNWEDEPQEPQEPNQVPSEDTET---DELWASLEAAAKRKLPDLDQTQGALQRRKKKKR 378

[Close]

BLAST of Cp4.1LG09g09870 vs. ExPASy Swiss-Prot
Match: Q54FW9 (WD repeat-containing protein DDB_G0290555 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290555 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 6.1e-15
Identity = 82/334 (24.55%), Postives = 163/334 (48.80%), Query Frame = 0


Query: 85  IEVLNPLNGN-LHVAISD-----NTDTSPPKDD-AIIGMHLFSKDESALASRRCTLLSCT 144
           I+ ++PLN + L VA+ +      T T+P     A + +   +K +S  A+   + +   
Sbjct: 81  IKAIHPLNNDKLLVALENGLVDVKTLTAPITTQLAPMNLPTLNKKKSPAAAAAASTVGKN 140

Query: 145 KKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEVNTW 204
            K    +     + S S +++TNL        SG  +    + S     FGGK V +  W
Sbjct: 141 NKSKQVIVEPVNTQSFSLNVATNL--------SGFAM----NPSNDKFAFGGKDVNLTIW 200

Query: 205 NLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISAQ-- 264
           +LE+  K ++AK  K + L +  P     V +++ D   K   G ++ +++ YD+ ++  
Sbjct: 201 DLEKQVKTYSAKF-KHDFLNLQEPVSINVVKYMNDD---KILIG-SDFRIKAYDLRSKTN 260

Query: 265 KRPVISFDFRETPIKALA-EDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 324
           +   +   F + PI+++   +   +  +  ++ G +  +D+R  + +G F    +GS++ 
Sbjct: 261 RSSFLDVSFSKHPIQSIQYTNQKEHYFYASDSIGKVFCYDVRTSRQVGSFKDS-AGSVKD 320

Query: 325 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAVES 384
           IA HP  P++A+ GLD ++R +++  R++L  +FLKQ L+ V+F      E+ T+   E 
Sbjct: 321 IAIHPTLPLLATVGLDRHLRVYNLDNRKMLHKIFLKQRLSCVLFSK----EEPTN---EI 380

Query: 385 IQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKR 409
            Q++ EI + + E ++           +G  KK+
Sbjct: 381 AQEEEEIWKNLEENKNRINNDDNDDNNEGNDKKK 389

[Close]

BLAST of Cp4.1LG09g09870 vs. ExPASy Swiss-Prot
Match: Q6BUJ2 (Ribosome biogenesis protein NSA1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=NSA1 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.8e-06
Identity = 61/238 (25.63%), Postives = 106/238 (44.54%), Query Frame = 0


Query: 205 IWTAKAPKKNSLGIFTPTCFTSVTFLSK--DDHRKFAAGTNNHQVRLYDISAQKRPVISF 264
           I+TA+  K + L +  P   +S+ F  +   D  KF   T   QVR+YD +  KRP+  +
Sbjct: 193 IFTARNVKNDHLDLRPPIWISSILFFEEKPKDGYKFLTSTRYGQVRIYDTTHGKRPIQDY 252

Query: 265 DFRETPIKALAEDVDGNTIFVGNATGDLASFDIRN--------------------GKLLG 324
              E PI  L        + V +    +A + +                       KLLG
Sbjct: 253 KVCEKPIVTLNFADSEEEVIVSDTHNLVAKYSLAQIDSKAFKTHSASAGEITKPVSKLLG 312

Query: 325 CF-LGKCSGSIRSIARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGV-VFDS 384
            F  G  +G+I  +    +  II++ GLD Y+R +DI +R++L+ V+L   ++ V + DS
Sbjct: 313 KFSAGGNTGAIVGVNIFDD-EIISTGGLDRYLRTYDISSREILAKVYLGVQISDVLMLDS 372

Query: 385 HFVGEDTTHSAV---------ESIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRK 410
               E+   S +         +  ++ +E  +  S+EE    + ++ +K   E KKR+
Sbjct: 373 EDEEEEEPESEMGDKRKKNIEKRRRKALEAEENESDEEELWNQLEENNKTKIEKKKRR 429

[Close]

BLAST of Cp4.1LG09g09870 vs. NCBI nr
Match: XP_023542679.1 (WD repeat-containing protein 74-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 702 bits (1812), Expect = 1.67e-252
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0


Query: 75  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLL 134
           LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLL
Sbjct: 67  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLL 126

Query: 135 SCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 194
           SCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV
Sbjct: 127 SCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 186

Query: 195 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISA 254
           NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISA
Sbjct: 187 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISA 246

Query: 255 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 314
           QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS
Sbjct: 247 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 306

Query: 315 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAVES 374
           IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAVES
Sbjct: 307 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAVES 366

Query: 375 IQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR 431
           IQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR
Sbjct: 367 IQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR 423

[Close]

BLAST of Cp4.1LG09g09870 vs. NCBI nr
Match: XP_023542678.1 (WD repeat-containing protein 74-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 697 bits (1800), Expect = 1.17e-250
Identity = 357/358 (99.72%), Postives = 357/358 (99.72%), Query Frame = 0


Query: 75  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLL 134
           LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLL
Sbjct: 67  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLL 126

Query: 135 SCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 194
           SCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV
Sbjct: 127 SCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 186

Query: 195 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISA 254
           NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISA
Sbjct: 187 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISA 246

Query: 255 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 314
           QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS
Sbjct: 247 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 306

Query: 315 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGE-DTTHSAVE 374
           IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGE DTTHSAVE
Sbjct: 307 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEADTTHSAVE 366

Query: 375 SIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR 431
           SIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR
Sbjct: 367 SIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR 424

[Close]

BLAST of Cp4.1LG09g09870 vs. NCBI nr
Match: XP_022994307.1 (WD repeat-containing protein 74 isoform X2 [Cucurbita maxima])

HSP 1 Score: 682 bits (1759), Expect = 1.96e-244
Identity = 345/357 (96.64%), Postives = 352/357 (98.60%), Query Frame = 0


Query: 75  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLL 134
           LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLF+KDE ALASRRCTLL
Sbjct: 67  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFAKDELALASRRCTLL 126

Query: 135 SCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 194
           SCTKKGNASMR+IDFSSSSS+DISTN+VKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV
Sbjct: 127 SCTKKGNASMRSIDFSSSSSEDISTNIVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 186

Query: 195 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISA 254
           NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGT++HQVRLYDISA
Sbjct: 187 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTSSHQVRLYDISA 246

Query: 255 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 314
           QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS
Sbjct: 247 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 306

Query: 315 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAVES 374
           IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAV+S
Sbjct: 307 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAVDS 366

Query: 375 IQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR 431
           IQQDIEI QT SEEEHTPQKRKKASKEDGEGKKRKGASKENKK KKK HGETESKQR
Sbjct: 367 IQQDIEISQTFSEEEHTPQKRKKASKEDGEGKKRKGASKENKKCKKKSHGETESKQR 423

[Close]

BLAST of Cp4.1LG09g09870 vs. NCBI nr
Match: XP_022955242.1 (WD repeat-containing protein 74-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 680 bits (1754), Expect = 1.13e-243
Identity = 345/357 (96.64%), Postives = 351/357 (98.32%), Query Frame = 0


Query: 75  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLL 134
           LLAVARKNGLIEVLNPLNGNLHVAISDNTD+SPPKDDAIIGMHLF KDE ALASRRCTLL
Sbjct: 67  LLAVARKNGLIEVLNPLNGNLHVAISDNTDSSPPKDDAIIGMHLFEKDELALASRRCTLL 126

Query: 135 SCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 194
           SCTKKGNASMR+IDFSSSSS+DISTN VKTWKVC SGDV+CSKVDGSETHALFGGKGVEV
Sbjct: 127 SCTKKGNASMRSIDFSSSSSEDISTNPVKTWKVCSSGDVMCSKVDGSETHALFGGKGVEV 186

Query: 195 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISA 254
           NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGT++HQVRLYDISA
Sbjct: 187 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTSSHQVRLYDISA 246

Query: 255 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 314
           QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS
Sbjct: 247 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 306

Query: 315 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAVES 374
           IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGED THSAVES
Sbjct: 307 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDITHSAVES 366

Query: 375 IQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR 431
           IQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKK HGETESKQR
Sbjct: 367 IQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKSHGETESKQR 423

[Close]

BLAST of Cp4.1LG09g09870 vs. NCBI nr
Match: XP_022994306.1 (WD repeat-containing protein 74 isoform X1 [Cucurbita maxima])

HSP 1 Score: 677 bits (1747), Expect = 1.37e-242
Identity = 345/358 (96.37%), Postives = 352/358 (98.32%), Query Frame = 0


Query: 75  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLL 134
           LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLF+KDE ALASRRCTLL
Sbjct: 67  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFAKDELALASRRCTLL 126

Query: 135 SCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 194
           SCTKKGNASMR+IDFSSSSS+DISTN+VKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV
Sbjct: 127 SCTKKGNASMRSIDFSSSSSEDISTNIVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 186

Query: 195 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISA 254
           NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGT++HQVRLYDISA
Sbjct: 187 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTSSHQVRLYDISA 246

Query: 255 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 314
           QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS
Sbjct: 247 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 306

Query: 315 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGE-DTTHSAVE 374
           IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGE DTTHSAV+
Sbjct: 307 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEADTTHSAVD 366

Query: 375 SIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR 431
           SIQQDIEI QT SEEEHTPQKRKKASKEDGEGKKRKGASKENKK KKK HGETESKQR
Sbjct: 367 SIQQDIEISQTFSEEEHTPQKRKKASKEDGEGKKRKGASKENKKCKKKSHGETESKQR 424

[Close]

BLAST of Cp4.1LG09g09870 vs. ExPASy TrEMBL
Match: A0A6J1JVF3 (WD repeat-containing protein 74 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490075 PE=4 SV=1)

HSP 1 Score: 682 bits (1759), Expect = 9.51e-245
Identity = 345/357 (96.64%), Postives = 352/357 (98.60%), Query Frame = 0


Query: 75  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLL 134
           LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLF+KDE ALASRRCTLL
Sbjct: 67  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFAKDELALASRRCTLL 126

Query: 135 SCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 194
           SCTKKGNASMR+IDFSSSSS+DISTN+VKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV
Sbjct: 127 SCTKKGNASMRSIDFSSSSSEDISTNIVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 186

Query: 195 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISA 254
           NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGT++HQVRLYDISA
Sbjct: 187 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTSSHQVRLYDISA 246

Query: 255 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 314
           QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS
Sbjct: 247 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 306

Query: 315 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAVES 374
           IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAV+S
Sbjct: 307 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAVDS 366

Query: 375 IQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR 431
           IQQDIEI QT SEEEHTPQKRKKASKEDGEGKKRKGASKENKK KKK HGETESKQR
Sbjct: 367 IQQDIEISQTFSEEEHTPQKRKKASKEDGEGKKRKGASKENKKCKKKSHGETESKQR 423

[Close]

BLAST of Cp4.1LG09g09870 vs. ExPASy TrEMBL
Match: A0A6J1GT09 (WD repeat-containing protein 74-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457261 PE=4 SV=1)

HSP 1 Score: 680 bits (1754), Expect = 5.49e-244
Identity = 345/357 (96.64%), Postives = 351/357 (98.32%), Query Frame = 0


Query: 75  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLL 134
           LLAVARKNGLIEVLNPLNGNLHVAISDNTD+SPPKDDAIIGMHLF KDE ALASRRCTLL
Sbjct: 67  LLAVARKNGLIEVLNPLNGNLHVAISDNTDSSPPKDDAIIGMHLFEKDELALASRRCTLL 126

Query: 135 SCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 194
           SCTKKGNASMR+IDFSSSSS+DISTN VKTWKVC SGDV+CSKVDGSETHALFGGKGVEV
Sbjct: 127 SCTKKGNASMRSIDFSSSSSEDISTNPVKTWKVCSSGDVMCSKVDGSETHALFGGKGVEV 186

Query: 195 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISA 254
           NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGT++HQVRLYDISA
Sbjct: 187 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTSSHQVRLYDISA 246

Query: 255 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 314
           QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS
Sbjct: 247 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 306

Query: 315 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAVES 374
           IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGED THSAVES
Sbjct: 307 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDITHSAVES 366

Query: 375 IQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR 431
           IQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKK HGETESKQR
Sbjct: 367 IQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKSHGETESKQR 423

[Close]

BLAST of Cp4.1LG09g09870 vs. ExPASy TrEMBL
Match: A0A6J1JYR5 (WD repeat-containing protein 74 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490075 PE=4 SV=1)

HSP 1 Score: 677 bits (1747), Expect = 6.62e-243
Identity = 345/358 (96.37%), Postives = 352/358 (98.32%), Query Frame = 0


Query: 75  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLL 134
           LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLF+KDE ALASRRCTLL
Sbjct: 67  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFAKDELALASRRCTLL 126

Query: 135 SCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 194
           SCTKKGNASMR+IDFSSSSS+DISTN+VKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV
Sbjct: 127 SCTKKGNASMRSIDFSSSSSEDISTNIVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 186

Query: 195 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISA 254
           NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGT++HQVRLYDISA
Sbjct: 187 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTSSHQVRLYDISA 246

Query: 255 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 314
           QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS
Sbjct: 247 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 306

Query: 315 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGE-DTTHSAVE 374
           IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGE DTTHSAV+
Sbjct: 307 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEADTTHSAVD 366

Query: 375 SIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR 431
           SIQQDIEI QT SEEEHTPQKRKKASKEDGEGKKRKGASKENKK KKK HGETESKQR
Sbjct: 367 SIQQDIEISQTFSEEEHTPQKRKKASKEDGEGKKRKGASKENKKCKKKSHGETESKQR 424

[Close]

BLAST of Cp4.1LG09g09870 vs. ExPASy TrEMBL
Match: A0A6J1GUM0 (WD repeat-containing protein 74-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457261 PE=4 SV=1)

HSP 1 Score: 675 bits (1742), Expect = 3.82e-242
Identity = 345/358 (96.37%), Postives = 351/358 (98.04%), Query Frame = 0


Query: 75  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPKDDAIIGMHLFSKDESALASRRCTLL 134
           LLAVARKNGLIEVLNPLNGNLHVAISDNTD+SPPKDDAIIGMHLF KDE ALASRRCTLL
Sbjct: 67  LLAVARKNGLIEVLNPLNGNLHVAISDNTDSSPPKDDAIIGMHLFEKDELALASRRCTLL 126

Query: 135 SCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVEV 194
           SCTKKGNASMR+IDFSSSSS+DISTN VKTWKVC SGDV+CSKVDGSETHALFGGKGVEV
Sbjct: 127 SCTKKGNASMRSIDFSSSSSEDISTNPVKTWKVCSSGDVMCSKVDGSETHALFGGKGVEV 186

Query: 195 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDISA 254
           NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGT++HQVRLYDISA
Sbjct: 187 NTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTSSHQVRLYDISA 246

Query: 255 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 314
           QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS
Sbjct: 247 QKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIRS 306

Query: 315 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGE-DTTHSAVE 374
           IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGE D THSAVE
Sbjct: 307 IARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEADITHSAVE 366

Query: 375 SIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKLHGETESKQR 431
           SIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKK HGETESKQR
Sbjct: 367 SIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGASKENKKSKKKSHGETESKQR 424

[Close]

BLAST of Cp4.1LG09g09870 vs. ExPASy TrEMBL
Match: A0A6J1EA63 (WD repeat-containing protein 74-like OS=Cucurbita moschata OX=3662 GN=LOC111431283 PE=4 SV=1)

HSP 1 Score: 612 bits (1577), Expect = 5.30e-217
Identity = 316/361 (87.53%), Postives = 332/361 (91.97%), Query Frame = 0


Query: 75  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPP-KDDAIIGMHLFSKDESALASRRCTL 134
           LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPP KD+AI+GMHL SKDES LASRRCTL
Sbjct: 67  LLAVARKNGLIEVLNPLNGNLHVAISDNTDTSPPPKDEAIVGMHLLSKDESELASRRCTL 126

Query: 135 LSCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVE 194
           LSCT KGNASMR I+FSSSSS+D STNL +TWK+C SGDV+CSKVDGSETHALFGGKGVE
Sbjct: 127 LSCTTKGNASMRTIEFSSSSSEDTSTNLAQTWKICSSGDVMCSKVDGSETHALFGGKGVE 186

Query: 195 VNTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDIS 254
           VN WNLEQCTKIWTAKAPKKNSLGIFTPT FTS TFLSKDDHRKFAAGTN+HQVRLYDIS
Sbjct: 187 VNMWNLEQCTKIWTAKAPKKNSLGIFTPTWFTSATFLSKDDHRKFAAGTNSHQVRLYDIS 246

Query: 255 AQKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIR 314
           AQKRPVISFDF ETPIKALAEDVDGNTIFVGNA+GDLASFDIRNGKLLGCFLGKCSGSIR
Sbjct: 247 AQKRPVISFDFGETPIKALAEDVDGNTIFVGNASGDLASFDIRNGKLLGCFLGKCSGSIR 306

Query: 315 SIARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDTTHSAVE 374
           SIARHPEF +IASCGLDSYVRFWDIKTRQLLSAVFLKQHL GVVFDSHFV ED THSAVE
Sbjct: 307 SIARHPEFSVIASCGLDSYVRFWDIKTRQLLSAVFLKQHLTGVVFDSHFVEEDVTHSAVE 366

Query: 375 SIQQDIEIGQTVSEEEHTPQKRKKASKEDGEGKKRKGAS---KENKKSKKKLHGETESKQ 431
            IQQ+ E+ QTV+EEEH PQKRKKA KEDGEG KRKG+    KENKKS++K H E ESKQ
Sbjct: 367 -IQQETEVTQTVNEEEHVPQKRKKAFKEDGEGGKRKGSKTIDKENKKSRRKSHREIESKQ 426

[Close]

BLAST of Cp4.1LG09g09870 vs. TAIR 10
Match: AT1G29320.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 387.9 bits (995), Expect = 1.1e-107
Identity = 208/378 (55.03%), Postives = 262/378 (69.31%), Query Frame = 0


Query: 75  LLAVARKNGLIEVLNPLNGNLHVAIS-DNTDTSPPKDDAIIGMHLFSKDESALASRRCTL 134
           LLAVARK+G +EV+NP NG+LH + S    D   P+D+ I  +HLF K       R CTL
Sbjct: 67  LLAVARKDGNVEVINPCNGDLHFSYSVFGDDGCSPEDNEISALHLFRKKIDDQTERSCTL 126

Query: 135 LSCTKKGNASMRAIDFSSSSSDDISTNLVKTWKVCGSGDVLCSKVDGSETHALFGGKGVE 194
           L+CTKKG+ S+R++ F  +  +       KTWK CGSG++L  KVDGSE  +LFGGK VE
Sbjct: 127 LTCTKKGDVSLRSVKFPDAHGNSTDDASPKTWKACGSGEILVGKVDGSENFSLFGGKRVE 186

Query: 195 VNTWNLEQCTKIWTAKAPKKNSLGIFTPTCFTSVTFLSKDDHRKFAAGTNNHQVRLYDIS 254
            N W+LEQCTKIW+AK P KN+LGIFTPT FTS TFLSKDDHRKF  GT +HQVRLYDIS
Sbjct: 187 ANIWDLEQCTKIWSAKCPPKNNLGIFTPTWFTSATFLSKDDHRKFVTGTKSHQVRLYDIS 246

Query: 255 AQKRPVISFDFRETPIKALAEDVDGNTIFVGNATGDLASFDIRNGKLLGCFLGKCSGSIR 314
            Q+RPV+SFDFRET I ++AED DG+TI+VGNA+ DLASFDIR GKLLG FLGKCSGSIR
Sbjct: 247 TQRRPVLSFDFRETAITSIAEDPDGHTIYVGNASADLASFDIRTGKLLGSFLGKCSGSIR 306

Query: 315 SIARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFLKQHLNGVVFDSHFVGEDT----TH 374
           S+ RHP+  +IASCGLD Y+R +D+KTRQL+SAVFLKQHL G+VFDS F GE+T    T 
Sbjct: 307 SVVRHPQHQVIASCGLDRYLRVYDVKTRQLISAVFLKQHLTGLVFDSGFSGEETAVANTV 366

Query: 375 SAVESIQQDIEIGQTVSEEEHTPQKRKKASKE----------------DGEGKKRKGASK 432
           +   + ++   + Q   E E  P KRKK+ KE                + E +K    +K
Sbjct: 367 AEAATEEKMTIMDQEDDETEKAPVKRKKSKKEKRSREIVFEGEDDEENEDEIEKAPVKTK 426

[Close]

BLAST of Cp4.1LG09g09870 vs. TAIR 10
Match: AT5G23430.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 3.4e-05
Identity = 31/127 (24.41%), Postives = 56/127 (44.09%), Query Frame = 0


Query: 230 LSKDDHRKFAAGTNNHQVRLYDISAQKRPVISFDFRETPIKALAEDVDGNTIFVGNATGD 289
           + +   R    G  +H+V L+ I  +   ++S     + I ++  D     +  G A+G 
Sbjct: 24  IGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGT 83

Query: 290 LASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFL 349
           +  +D+   K++    G  S  I S+  HP     AS  LD+ ++ WDI+ +  +     
Sbjct: 84  IKLWDLEEAKIVRTLTGHRSNCI-SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT--Y 143

Query: 350 KQHLNGV 357
           K H  GV
Sbjct: 144 KGHTRGV 146

[Close]

BLAST of Cp4.1LG09g09870 vs. TAIR 10
Match: AT5G23430.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 3.4e-05
Identity = 31/127 (24.41%), Postives = 56/127 (44.09%), Query Frame = 0


Query: 230 LSKDDHRKFAAGTNNHQVRLYDISAQKRPVISFDFRETPIKALAEDVDGNTIFVGNATGD 289
           + +   R    G  +H+V L+ I  +   ++S     + I ++  D     +  G A+G 
Sbjct: 24  IGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGT 83

Query: 290 LASFDIRNGKLLGCFLGKCSGSIRSIARHPEFPIIASCGLDSYVRFWDIKTRQLLSAVFL 349
           +  +D+   K++    G  S  I S+  HP     AS  LD+ ++ WDI+ +  +     
Sbjct: 84  IKLWDLEEAKIVRTLTGHRSNCI-SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT--Y 143

Query: 350 KQHLNGV 357
           K H  GV
Sbjct: 144 KGHTRGV 146

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g09870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q58D06	8.2e-20	29.57	WD repeat-containing protein 74 OS=Bos taurus OX=9913 GN=WDR74 PE=2 SV=1	[more]
Q6RFH5	1.1e-19	29.84	WD repeat-containing protein 74 OS=Homo sapiens OX=9606 GN=WDR74 PE=1 SV=1	[more]
Q8VCG3	1.1e-19	30.77	WD repeat-containing protein 74 OS=Mus musculus OX=10090 GN=Wdr74 PE=2 SV=1	[more]
Q54FW9	6.1e-15	24.55	WD repeat-containing protein DDB_G0290555 OS=Dictyostelium discoideum OX=44689 G...	[more]
Q6BUJ2	1.8e-06	25.63	Ribosome biogenesis protein NSA1 OS=Debaryomyces hansenii (strain ATCC 36239 / C...	[more]

BLAST of Cp4.1LG09g09870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542679.1	1.67e-252	100.00	WD repeat-containing protein 74-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023542678.1	1.17e-250	99.72	WD repeat-containing protein 74-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022994307.1	1.96e-244	96.64	WD repeat-containing protein 74 isoform X2 [Cucurbita maxima]	[more]
XP_022955242.1	1.13e-243	96.64	WD repeat-containing protein 74-like isoform X2 [Cucurbita moschata]	[more]
XP_022994306.1	1.37e-242	96.37	WD repeat-containing protein 74 isoform X1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG09g09870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVF3	9.51e-245	96.64	WD repeat-containing protein 74 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GT09	5.49e-244	96.64	WD repeat-containing protein 74-like isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JYR5	6.62e-243	96.37	WD repeat-containing protein 74 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GUM0	3.82e-242	96.37	WD repeat-containing protein 74-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EA63	5.30e-217	87.53	WD repeat-containing protein 74-like OS=Cucurbita moschata OX=3662 GN=LOC1114312...	[more]

BLAST of Cp4.1LG09g09870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29320.1	1.1e-107	55.03	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G23430.1	3.4e-05	24.41	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G23430.2	3.4e-05	24.41	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 297..337 e-value: 0.0086 score: 25.3 coord: 212..251 e-value: 32.0 score: 7.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 305..346 score: 10.074014
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 62..419 e-value: 3.1E-21 score: 77.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 381..431
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 383..411
None	No IPR available	PANTHER	PTHR16038:SF5	BNAANNG21410D PROTEIN	coord: 75..247
None	No IPR available	PANTHER	PTHR16038:SF5	BNAANNG21410D PROTEIN	coord: 246..425
IPR037379	WDR74/Nsa1	PANTHER	PTHR16038	NOP SEVEN ASSOCIATED PROTEIN 1	coord: 75..247
IPR037379	WDR74/Nsa1	PANTHER	PTHR16038	NOP SEVEN ASSOCIATED PROTEIN 1	coord: 246..425
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 324..338
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 63..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g09870.1	Cp4.1LG09g09870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042273	ribosomal large subunit biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0005515	protein binding