Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAGAGAAGTAGGTACCTCGTACCTGGGGGTTCCCTGCTTTCATAGTCCAATATTTGACAGTTGTGTATTTTGTGTTGGGCTGTGCAGAAATTTTGAGGCAAGACTTTCCTTTTGATCGCATCATCAAAATGGAGTTGAACGGCAAATCCATGGTCTCTGCAAACGTTATTTATCTTTCAACTATTCTGGGTAGAGATGAGCAAGTTGTTGCCCACAAATGTGATTGGAAATGTGAGAATGAACATGTGTGTGGTAATATGTACCGCTGCAAACTTACAGGAATGACTCACATTTGTGACAAAAACTGTGACCAAAGAATTGTGTATGATAACCATAGCTCACTTTGTCGTGCAAGTGGGCAAATTTTCCCGCTTACACTGACAGAGGAACAAGCAATCAGAGGCATTCGCAGGAAACTTGATGCTGACAGTTCCTCCGTTGATGATTTTGGTTTTAAGCGTAGGCGGGATGCCCAGTTTCATCCTTCACCTTTTGAGAGATCTTTCTCTGCTGCCGTCCCAATTTGTAGTCAAGTTGGAGATGGCATGGATATGATGAGCTAGATTTGTTTATGAAAAAGAAGCAAAACTGGGGCTTGTCTCTGTGCTCTGTTCTTTTGAATAATTTTCCTTTTGTTTTGCGTATGGACTGATAATCATATAATGGACTTGACCTGCGGGTGCTTGAAGTGGTGGACCTTGTTTGCCCCACCTGTTTGTAGGGACGCTTATATTTCTAATCTTGTCTTATGCAATATGTAGCTGACACTAGATTGACTATACTATAACAGATAAGATGGATCCGGATCATCATCAAACTTACATTTCTATTTTGTATTTCCTTCACCACCTTCTAACATAGACAGACTATTGAAGCCTCCGATTTGTATTCATATTGTTTTGAAATCTGTCTTGCTAGACCTGCTTTTGGCTGTGTTCAGGTTTCTAATATTTATTATTAGCTTTCTTCTTTTCATATGAGCTTGTCCTTAAGTCATTTTCTTTTTACTATTTTGCAGCAGAGGGTCATTTTCCTAATTGTGAGAGTTTAGTTATGCTCCTCAGTTAATGTTCCTTGTTCTGCAATTTGTTTGAATGGAATCACTGATGCTTCTCACCTTTCTTGGCAGGTGTATTATGTGTCTTTGTAGATGTGGAGAACAAGTTTAGTGAACGAAATGGGGTCATCCTTAGAAGGTGCGGAAAGGATTTTTGAGGCACTCTCACAAGACATTTCCCGCCTCCCTTACTCAACTTTATTTCTTGATTTTTCTCCTGCATTTGATTTGCAGGGGCAATGCTTGATAAAGTAATGGAGCTACCGTAGTCGGTTTGGTTATTGTGCTTGTCATTTGTAATTTTTTTGCTAATATTGGAGATGTGTGGAACAAGTTCATCTCCACTGCTCAATTCCTGCCCTGTATTATGTAAAGTTATGATACGGTCCAACACTTGTTTGTTTTGACTATTATGAATTTTGTTTCACATTGCATTCTGTGAAGTGCACTCCAAAAGGAACAATTCTTCTGCCTCCCTAATCTTTGCATGCTGTGATAGCA
mRNA sequence
ATGATCAGAGAAGTAGAAATTTTGAGGCAAGACTTTCCTTTTGATCGCATCATCAAAATGGAGTTGAACGGCAAATCCATGGTCTCTGCAAACGTTATTTATCTTTCAACTATTCTGGGTAGAGATGAGCAAGTTGTTGCCCACAAATGTGATTGGAAATGTGAGAATGAACATGTGTGTGGTAATATGTACCGCTGCAAACTTACAGGAATGACTCACATTTGTGACAAAAACTGTGACCAAAGAATTGTGTATGATAACCATAGCTCACTTTGTCGTGCAAGTGGGCAAATTTTCCCGCTTACACTGACAGAGGAACAAGCAATCAGAGGCATTCGCAGGAAACTTGATGCTGACAGTTCCTCCGTTGATGATTTTGGTTTTAAGCGTAGGCGGGATGCCCAGTTTCATCCTTCACCTTTTGAGAGATCTTTCTCTGCTGCCGTCCCAATTTGTAGTCAAGTTGGAGATGGCATGGATATGATGAGCTAGATTTGTTTATGAAAAAGAAGCAAAACTGGGGCTTGTCTCTGTGCTCTGTTCTTTTGAATAATTTTCCTTTTGTTTTGCGTATGGACTGATAATCATATAATGGACTTGACCTGCGGGTGCTTGAAGTGGTGGACCTTGTTTGCCCCACCTGTTTGTAGGGACGCTTATATTTCTAATCTTGTCTTATGCAATATGTAGCTGACACTAGATTGACTATACTATAACAGATAAGATGGATCCGGATCATCATCAAACTTACATTTCTATTTTGTATTTCCTTCACCACCTTCTAACATAGACAGACTATTGAAGCCTCCGATTTGTATTCATATTGTTTTGAAATCTGTCTTGCTAGACCTGCTTTTGGCTGTGTTCAGGTTTCTAATATTTATTATTAGCTTTCTTCTTTTCATATGAGCTTGTCCTTAAGTCATTTTCTTTTTACTATTTTGCAGCAGAGGGTCATTTTCCTAATTGTGAGAGTTTAGTTATGCTCCTCAGTTAATGTTCCTTGTTCTGCAATTTGTTTGAATGGAATCACTGATGCTTCTCACCTTTCTTGGCAGGTGTATTATGTGTCTTTGTAGATGTGGAGAACAAGTTTAGTGAACGAAATGGGGTCATCCTTAGAAGGGGCAATGCTTGATAAAGTAATGGAGCTACCGTAGTCGGTTTGGTTATTGTGCTTGTCATTTGTAATTTTTTTGCTAATATTGGAGATGTGTGGAACAAGTTCATCTCCACTGCTCAATTCCTGCCCTGTATTATGTAAAGTTATGATACGGTCCAACACTTGTTTGTTTTGACTATTATGAATTTTGTTTCACATTGCATTCTGTGAAGTGCACTCCAAAAGGAACAATTCTTCTGCCTCCCTAATCTTTGCATGCTGTGATAGCA
Coding sequence (CDS)
ATGATCAGAGAAGTAGAAATTTTGAGGCAAGACTTTCCTTTTGATCGCATCATCAAAATGGAGTTGAACGGCAAATCCATGGTCTCTGCAAACGTTATTTATCTTTCAACTATTCTGGGTAGAGATGAGCAAGTTGTTGCCCACAAATGTGATTGGAAATGTGAGAATGAACATGTGTGTGGTAATATGTACCGCTGCAAACTTACAGGAATGACTCACATTTGTGACAAAAACTGTGACCAAAGAATTGTGTATGATAACCATAGCTCACTTTGTCGTGCAAGTGGGCAAATTTTCCCGCTTACACTGACAGAGGAACAAGCAATCAGAGGCATTCGCAGGAAACTTGATGCTGACAGTTCCTCCGTTGATGATTTTGGTTTTAAGCGTAGGCGGGATGCCCAGTTTCATCCTTCACCTTTTGAGAGATCTTTCTCTGCTGCCGTCCCAATTTGTAGTCAAGTTGGAGATGGCATGGATATGATGAGCTAG
Protein sequence
MIREVEILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Homology
BLAST of Cp4.1LG09g00150 vs. NCBI nr
Match:
XP_023542353.1 (uncharacterized protein LOC111802281 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 328 bits (840), Expect = 6.76e-113
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
Query: 6 EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR 65
EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR
Sbjct: 24 EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR 83
Query: 66 CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDD 125
CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDD
Sbjct: 84 CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDD 143
Query: 126 FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS 163
FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Sbjct: 144 FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS 181
BLAST of Cp4.1LG09g00150 vs. NCBI nr
Match:
XP_022967983.1 (uncharacterized protein LOC111467357 isoform X1 [Cucurbita maxima])
HSP 1 Score: 327 bits (837), Expect = 1.94e-112
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0
Query: 6 EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR 65
EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR
Sbjct: 24 EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR 83
Query: 66 CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDD 125
CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD+SSVDD
Sbjct: 84 CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADNSSVDD 143
Query: 126 FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS 163
FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Sbjct: 144 FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS 181
BLAST of Cp4.1LG09g00150 vs. NCBI nr
Match:
XP_022945025.1 (uncharacterized protein LOC111449390 isoform X1 [Cucurbita moschata])
HSP 1 Score: 327 bits (837), Expect = 1.94e-112
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0
Query: 6 EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR 65
EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR
Sbjct: 24 EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR 83
Query: 66 CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDD 125
CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD+SSVDD
Sbjct: 84 CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADNSSVDD 143
Query: 126 FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS 163
FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Sbjct: 144 FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS 181
BLAST of Cp4.1LG09g00150 vs. NCBI nr
Match:
KAG6574273.1 (hypothetical protein SDJN03_28160, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 327 bits (838), Expect = 3.78e-107
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0
Query: 2 IREVEILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCG 61
I E +ILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCG
Sbjct: 411 IAESKILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCG 470
Query: 62 NMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSS 121
NMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD+S
Sbjct: 471 NMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADNS 530
Query: 122 SVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS 163
SVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Sbjct: 531 SVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS 572
BLAST of Cp4.1LG09g00150 vs. NCBI nr
Match:
XP_023542354.1 (uncharacterized protein LOC111802281 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023542355.1 uncharacterized protein LOC111802281 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 300 bits (769), Expect = 1.26e-102
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
Query: 20 MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNC 79
MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNC
Sbjct: 1 MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNC 60
Query: 80 DQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDDFGFKRRRDAQFHPS 139
DQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDDFGFKRRRDAQFHPS
Sbjct: 61 DQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDDFGFKRRRDAQFHPS 120
Query: 140 PFERSFSAAVPICSQVGDGMDMMS 163
PFERSFSAAVPICSQVGDGMDMMS
Sbjct: 121 PFERSFSAAVPICSQVGDGMDMMS 144
BLAST of Cp4.1LG09g00150 vs. ExPASy TrEMBL
Match:
A0A6J1HWR1 (uncharacterized protein LOC111467357 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467357 PE=4 SV=1)
HSP 1 Score: 327 bits (837), Expect = 9.38e-113
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0
Query: 6 EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR 65
EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR
Sbjct: 24 EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR 83
Query: 66 CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDD 125
CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD+SSVDD
Sbjct: 84 CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADNSSVDD 143
Query: 126 FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS 163
FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Sbjct: 144 FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS 181
BLAST of Cp4.1LG09g00150 vs. ExPASy TrEMBL
Match:
A0A6J1FZQ8 (uncharacterized protein LOC111449390 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449390 PE=4 SV=1)
HSP 1 Score: 327 bits (837), Expect = 9.38e-113
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0
Query: 6 EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR 65
EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR
Sbjct: 24 EILRQDFPFDRIIKMELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYR 83
Query: 66 CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDD 125
CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD+SSVDD
Sbjct: 84 CKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADNSSVDD 143
Query: 126 FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS 163
FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Sbjct: 144 FGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS 181
BLAST of Cp4.1LG09g00150 vs. ExPASy TrEMBL
Match:
A0A6J1HTL7 (uncharacterized protein LOC111467357 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467357 PE=4 SV=1)
HSP 1 Score: 299 bits (766), Expect = 1.75e-102
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0
Query: 20 MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNC 79
MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNC
Sbjct: 1 MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNC 60
Query: 80 DQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDDFGFKRRRDAQFHPS 139
DQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD+SSVDDFGFKRRRDAQFHPS
Sbjct: 61 DQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADNSSVDDFGFKRRRDAQFHPS 120
Query: 140 PFERSFSAAVPICSQVGDGMDMMS 163
PFERSFSAAVPICSQVGDGMDMMS
Sbjct: 121 PFERSFSAAVPICSQVGDGMDMMS 144
BLAST of Cp4.1LG09g00150 vs. ExPASy TrEMBL
Match:
A0A6J1FZP7 (uncharacterized protein LOC111449390 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449390 PE=4 SV=1)
HSP 1 Score: 299 bits (766), Expect = 1.75e-102
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0
Query: 20 MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNC 79
MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNC
Sbjct: 1 MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNC 60
Query: 80 DQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDDFGFKRRRDAQFHPS 139
DQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD+SSVDDFGFKRRRDAQFHPS
Sbjct: 61 DQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADNSSVDDFGFKRRRDAQFHPS 120
Query: 140 PFERSFSAAVPICSQVGDGMDMMS 163
PFERSFSAAVPICSQVGDGMDMMS
Sbjct: 121 PFERSFSAAVPICSQVGDGMDMMS 144
BLAST of Cp4.1LG09g00150 vs. ExPASy TrEMBL
Match:
A0A6J1CI74 (uncharacterized protein LOC111011729 OS=Momordica charantia OX=3673 GN=LOC111011729 PE=4 SV=1)
HSP 1 Score: 281 bits (720), Expect = 1.87e-95
Identity = 135/144 (93.75%), Postives = 140/144 (97.22%), Query Frame = 0
Query: 20 MELNGKSMVS--ANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDK 79
MELNGKSMVS ANVIYLSTILGRD QV+AHKCDWKCENEHVCGNMYRCKLTG+THICDK
Sbjct: 1 MELNGKSMVSEPANVIYLSTILGRDGQVLAHKCDWKCENEHVCGNMYRCKLTGITHICDK 60
Query: 80 NCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSSVDDFGFKRRRDAQFH 139
NCDQRI+YDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD+SS+DDF FKRRRDAQFH
Sbjct: 61 NCDQRILYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADNSSIDDFAFKRRRDAQFH 120
Query: 140 PSPFERSFSAAVPICSQVGDGMDM 161
PSPFERSFSAAVPICSQVGDGMDM
Sbjct: 121 PSPFERSFSAAVPICSQVGDGMDM 144
BLAST of Cp4.1LG09g00150 vs. TAIR 10
Match:
AT5G24610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 213.4 bits (542), Expect = 1.4e-55
Identity = 104/148 (70.27%), Postives = 122/148 (82.43%), Query Frame = 0
Query: 20 MELNGKS---MVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICD 79
ME+ GKS + SANVIYLS ILGRD HKCDWKCENE+VCGNMYRCKLTG+TH+CD
Sbjct: 1 MEVFGKSPMVVTSANVIYLSAILGRD--CDGHKCDWKCENENVCGNMYRCKLTGLTHVCD 60
Query: 80 KNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLD-ADSSSVDDFGFK-RRRDA 139
KNC+QRI+YDNHSSLCRASG+IFPL+ EEQA++G+RRKLD A+S + FK RRRDA
Sbjct: 61 KNCNQRILYDNHSSLCRASGRIFPLSSVEEQAVKGVRRKLDAAESHPSESCSFKRRRRDA 120
Query: 140 QFHPSPFERSFSAAVPICSQVGDGMDMM 163
QFH SPFERSF+A PICS GDGM+++
Sbjct: 121 QFHASPFERSFTAVSPICSPAGDGMELV 146
BLAST of Cp4.1LG09g00150 vs. TAIR 10
Match:
AT3G49550.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24610.1); Has 55 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 203.8 bits (517), Expect = 1.1e-52
Identity = 100/148 (67.57%), Postives = 119/148 (80.41%), Query Frame = 0
Query: 20 MELNGKSMV---SANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICD 79
ME+ GKS V SANVIYLS ILG + HKCDWKCENE+VCGNMYRCKLTG+TH+CD
Sbjct: 1 MEVFGKSHVVVGSANVIYLSAILGHEGP--NHKCDWKCENENVCGNMYRCKLTGLTHVCD 60
Query: 80 KNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADSSS--VDDFGFKRRRDA 139
KNC+QRI+YDNH+SLCRASG+IFPL+L EEQA++G+RRKLD +S + +RRRDA
Sbjct: 61 KNCNQRILYDNHNSLCRASGRIFPLSLVEEQAVKGVRRKLDDESQQQPSESCVKRRRRDA 120
Query: 140 QFHPSPFERSFSAAVPICSQV-GDGMDM 162
QFH SPFERSF+A P CSQ GDGM++
Sbjct: 121 QFHSSPFERSFAAVSPFCSQAGGDGMEI 146
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023542353.1 | 6.76e-113 | 100.00 | uncharacterized protein LOC111802281 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
XP_022967983.1 | 1.94e-112 | 99.37 | uncharacterized protein LOC111467357 isoform X1 [Cucurbita maxima] | [more] |
XP_022945025.1 | 1.94e-112 | 99.37 | uncharacterized protein LOC111449390 isoform X1 [Cucurbita moschata] | [more] |
KAG6574273.1 | 3.78e-107 | 97.53 | hypothetical protein SDJN03_28160, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023542354.1 | 1.26e-102 | 100.00 | uncharacterized protein LOC111802281 isoform X2 [Cucurbita pepo subsp. pepo] >XP... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HWR1 | 9.38e-113 | 99.37 | uncharacterized protein LOC111467357 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1FZQ8 | 9.38e-113 | 99.37 | uncharacterized protein LOC111449390 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1HTL7 | 1.75e-102 | 99.31 | uncharacterized protein LOC111467357 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1FZP7 | 1.75e-102 | 99.31 | uncharacterized protein LOC111449390 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1CI74 | 1.87e-95 | 93.75 | uncharacterized protein LOC111011729 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
Match Name | E-value | Identity | Description | |
AT5G24610.1 | 1.4e-55 | 70.27 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT3G49550.1 | 1.1e-52 | 67.57 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |