Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACTAAGGCGACGGATTCGAAGGCGGTCATGACGGACCAGACGAGGTCGTCGACAACCGGAGTGTTGAGAAGGCCGCGAGGCAAACGGCGAAACCAGGCGGAGCTCCAGTTCCATGAGAAAAGCGAGGAGAGGACATCGGTCCACCGGAATATGGAAGATCTGATGGAAAATTCGAATTCCGGCCACCGGAATGCCGATCTCGATGAACTTCCCGCCATTGCTGCTTCTTCGACTCCTTGA
ATGGAGACTAAGGCGACGGATTCGAAGGCGGTCATGACGGACCAGACGAGGTCGTCGACAACCGGAGTGTTGAGAAGGCCGCGAGGCAAACGGCGAAACCAGGCGGAGCTCCAGTTCCATGAGAAAAGCGAGGAGAGGACATCGGTCCACCGGAATATGGAAGATCTGATGGAAAATTCGAATTCCGGCCACCGGAATGCCGATCTCGATGAACTTCCCGCCATTGCTGCTTCTTCGACTCCTTGA
ATGGAGACTAAGGCGACGGATTCGAAGGCGGTCATGACGGACCAGACGAGGTCGTCGACAACCGGAGTGTTGAGAAGGCCGCGAGGCAAACGGCGAAACCAGGCGGAGCTCCAGTTCCATGAGAAAAGCGAGGAGAGGACATCGGTCCACCGGAATATGGAAGATCTGATGGAAAATTCGAATTCCGGCCACCGGAATGCCGATCTCGATGAACTTCCCGCCATTGCTGCTTCTTCGACTCCTTGA
METKATDSKAVMTDQTRSSTTGVLRRPRGKRRNQAELQFHEKSEERTSVHRNMEDLMENSNSGHRNADLDELPAIAASSTP
Homology
BLAST of Cp4.1LG07g08550 vs. NCBI nr
Match:
KAA0048079.1 (hypothetical protein E6C27_scaffold385G001510 [Cucumis melo var. makuwa])
HSP 1 Score: 106 bits (265), Expect = 4.84e-28
Identity = 62/81 (76.54%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Cp4.1LG07g08550 vs. ExPASy TrEMBL
Match:
A0A5A7U3P7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001510 PE=4 SV=1)
HSP 1 Score: 106 bits (265), Expect = 2.34e-28
Identity = 62/81 (76.54%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Cp4.1LG07g08550 vs. ExPASy TrEMBL
Match:
A0A0A0LGJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034630 PE=4 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 1.39e-10
Identity = 36/48 (75.00%), Postives = 40/48 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
KAA0048079.1 4.84e-28 76.54 hypothetical protein E6C27_scaffold385G001510 [Cucumis melo var. makuwa] [more]
Match Name E-value Identity Description
A0A5A7U3P7 2.34e-28 76.54 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more] A0A0A0LGJ2 1.39e-10 75.00 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034630 PE=4 SV=1 [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
A T G G A G A C T A A G G C G A C G G A T T C G A A G G C G G T C A T G A C G G A C C A G A C G A G G T C G T C G A C A A C C G G A G T G T T G A G A A G G C C G C G A G G C A A A C G G C G A A A C C A G G C G G A G C T C C A G T T C C A T G A G A A A A G C G A G G A G A G G A C A T C G G T C C A C C G G A A T A T G G A A G A T C T G A T G G A A A A T T C G A A T T C C G G C C A C C G G A A T G C C G A T C T C G A T G A A C T T C C C G C C A T T G C T G C T T C T T C G A C T C C T T G A 20 40 60 80 100 120 140 160 180 200 220 240 Score = Score = Score = Sequence mobidb-lite mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 8..23 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..81 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 29..53
Relationships
The following mRNA feature(s) are a part of this gene:
