Cp4.1LG05g01230 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g01230
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	eisosome protein SEG2-like
Location	Cp4.1LG05: 394586 .. 396533 (+)
RNA-Seq Expression	Cp4.1LG05g01230
Synteny	Cp4.1LG05g01230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGACAGTCACTTGATTCGTTTGCTCGTTTCCCCCATAAGTTGAATTTAAAAAAAGAAGAAATCCTCTCGACCGTTTCACCCTGCCCCACTTGCCCTCCTTTCCTTTACTACCAATTCGAAGCATTCACTCTGTCTCTTTCTCTCATCTTCATCGGATTCTCTAATCTTCGTCGGATTCTCCCTCTACCTTACTCTGTATATCCAACCATGAAAACCCATTAGAGGGATCGGCCTTTCAGTGTCATCGGAGCATTTATCTCAGTCGGAGAGTCTTCCATTTTTGTTTTATCAACAATGGGGTGCTTCATTGCTTGTTTTCGCTCTTCAGATGACGTGAAGCGCAGGGAACAAAGGCGACGCAAGGTTTTGCCACGAATCCAAGTAAGCCATCTTCTAGTTTTCTCGAGCTCATGAGGGTTTTTTTTTTTTGCAACTTTTGTTTGATTTAATTGAAAGTGGTTGAAGAGTATCAGAGAAATAGGCCGACGGTAATCTCTCTATTGTGTTGATTTAGATTGCTACATGTTCATGGAATCTGTATTGATCTCGATTTCGTTGCTTTTAGTTATTTAAGTCCATTGGTTATAGTAAGAACTTGTTTGCTTTCTAGGAGTTTTCTTTGACGAACTAAACAGAGCTATAAGAACTGAGATCCCATTTTAAATTTTACTGTAGGCTAATGCTATCTCCAAGCCCGTTCAGACCTCACCATCCGCCGTAGACAATGCTTCTGATAGATCTACTAGTCCGATTCTGAAAGCTCGGTGAGCAACGAACAAGAAATTACCCCCTCCCTGTTTTTCTTTGAACACAAGCCGTTTCTTGTAGTGTTTTTTTAGGTTCTGATTCCAAGTTTATGGGTTCCTTGTGTAGGGACAGGCCCGAGGAGCTGCAACTAAGCCCGACTACTAGGAAAAGAGTAACGTTTGATTCTAATGTAAAGACATATGAGCTTGATCATGTTGAAGCTGAAGCTGAAGCTGATGTCTTACTTGAAAAGGAAGGGTACAAGGAGGAGAAGGAACTAGCTGGAATATCCCAATGCAAATCTCGCTCCGAAGATGGCTCCACTGTTTCGAGTGTTTCGTCGTACCCTCCCAATCATAGGTACCAGAATTATAGGGAGAGTGATGATGATGATGATGAATTGGATTATGCTGATAGTGATCTTGATCATGATCATGTTGACGATGATGATGATGATGGTGATGAGAACGATGATATTGAGGATGAAGAGTATGACCATTTCTCTGATGATGAAAGTGGGAGCAATTCTGCTCAAGTGTTTGCTGATGAGGTCGATAGCTGTTTGTCTGTATGTGGGTGTCCTGGAAAGGCTGAGCCTCAAATAGGGGCGAGACGGACTGCTCGAGATAGGAATGCCTGTGTTCATTCTGTGTTGAAGCCTGTGGAAAATATCTCACAGTGGAAGGCAGTTAAAGTTAGGGATAAACATCGGTCGAATCCTCCTTCCCACAAAGAGAATTTGGCACTAAATGGAGCTCCTAGGAGTTCTTTTGGGACAGAGCCAAGTTTCAAAGAATCATCATTTGGTTGCAAATCAAAAACTTGCCAACCTAAGAACTCAGATCAAGGCATAGCCGTTGATGCCAGCCTTTCAAACTGGTTGAGTTCTTCAGTTACAACACCCCCAAGCAAGACTAGCACAGGCATTTTAGGTCTTACAACACCAGAGTCACAAGGGTCAAACTCACCTAAAAACCAGGAAGATAGACCAATTTTGGGAGCCTTAACTATGGAGGAGCTCCGACAGTTCTCACCTCCTCCAAGGAGATCACCAAATAGAAGTCCCAATGAGATGCCAATCATTGGGACGGTCGGCACATACTGGAGTCACTCCAGCTCTGTTGAGGATTCTGGACCAGCCTCTTTCAAAAGAGAGTCAAATATCAGCGGTAACTACAGAGAAGAAATGCGTGTGAAGTAA

mRNA sequence

TGACAGTCACTTGATTCGTTTGCTCGTTTCCCCCATAAGTTGAATTTAAAAAAAGAAGAAATCCTCTCGACCGTTTCACCCTGCCCCACTTGCCCTCCTTTCCTTTACTACCAATTCGAAGCATTCACTCTGTCTCTTTCTCTCATCTTCATCGGATTCTCTAATCTTCGTCGGATTCTCCCTCTACCTTACTCTGTATATCCAACCATGAAAACCCATTAGAGGGATCGGCCTTTCAGTGTCATCGGAGCATTTATCTCAGTCGGAGAGTCTTCCATTTTTGTTTTATCAACAATGGGGTGCTTCATTGCTTGTTTTCGCTCTTCAGATGACGTGAAGCGCAGGGAACAAAGGCGACGCAAGGTTTTGCCACGAATCCAAGCTAATGCTATCTCCAAGCCCGTTCAGACCTCACCATCCGCCGTAGACAATGCTTCTGATAGATCTACTAGTCCGATTCTGAAAGCTCGGGACAGGCCCGAGGAGCTGCAACTAAGCCCGACTACTAGGAAAAGAGTAACGTTTGATTCTAATGTAAAGACATATGAGCTTGATCATGTTGAAGCTGAAGCTGAAGCTGATGTCTTACTTGAAAAGGAAGGGAATGCCTGTGTTCATTCTGTGTTGAAGCCTGTGGAAAATATCTCACAGTGGAAGGCAGTTAAAGTTAGGGATAAACATCGGTCGAATCCTCCTTCCCACAAAGAGAATTTGGCACTAAATGGAGCTCCTAGGAGTTCTTTTGGGACAGAGCCAAGTTTCAAAGAATCATCATTTGGTTGCAAATCAAAAACTTGCCAACCTAAGAACTCAGATCAAGGCATAGCCGTTGATGCCAGCCTTTCAAACTGGTTGAGTTCTTCAGTTACAACACCCCCAAGCAAGACTAGCACAGGCATTTTAGGTCTTACAACACCAGAGTCACAAGGGTCAAACTCACCTAAAAACCAGGAAGATAGACCAATTTTGGGAGCCTTAACTATGGAGGAGCTCCGACAGTTCTCACCTCCTCCAAGGAGATCACCAAATAGAAGTCCCAATGAGATGCCAATCATTGGGACGGTCGGCACATACTGGAGTCACTCCAGCTCTGTTGAGGATTCTGGACCAGCCTCTTTCAAAAGAGAGTCAAATATCAGCGGTAACTACAGAGAAGAAATGCGTGTGAAGTAA

Coding sequence (CDS)

ATGGGGTGCTTCATTGCTTGTTTTCGCTCTTCAGATGACGTGAAGCGCAGGGAACAAAGGCGACGCAAGGTTTTGCCACGAATCCAAGCTAATGCTATCTCCAAGCCCGTTCAGACCTCACCATCCGCCGTAGACAATGCTTCTGATAGATCTACTAGTCCGATTCTGAAAGCTCGGGACAGGCCCGAGGAGCTGCAACTAAGCCCGACTACTAGGAAAAGAGTAACGTTTGATTCTAATGTAAAGACATATGAGCTTGATCATGTTGAAGCTGAAGCTGAAGCTGATGTCTTACTTGAAAAGGAAGGGAATGCCTGTGTTCATTCTGTGTTGAAGCCTGTGGAAAATATCTCACAGTGGAAGGCAGTTAAAGTTAGGGATAAACATCGGTCGAATCCTCCTTCCCACAAAGAGAATTTGGCACTAAATGGAGCTCCTAGGAGTTCTTTTGGGACAGAGCCAAGTTTCAAAGAATCATCATTTGGTTGCAAATCAAAAACTTGCCAACCTAAGAACTCAGATCAAGGCATAGCCGTTGATGCCAGCCTTTCAAACTGGTTGAGTTCTTCAGTTACAACACCCCCAAGCAAGACTAGCACAGGCATTTTAGGTCTTACAACACCAGAGTCACAAGGGTCAAACTCACCTAAAAACCAGGAAGATAGACCAATTTTGGGAGCCTTAACTATGGAGGAGCTCCGACAGTTCTCACCTCCTCCAAGGAGATCACCAAATAGAAGTCCCAATGAGATGCCAATCATTGGGACGGTCGGCACATACTGGAGTCACTCCAGCTCTGTTGAGGATTCTGGACCAGCCTCTTTCAAAAGAGAGTCAAATATCAGCGGTAACTACAGAGAAGAAATGCGTGTGAAGTAA

Protein sequence

MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARDRPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEGNACVHSVLKPVENISQWKAVKVRDKHRSNPPSHKENLALNGAPRSSFGTEPSFKESSFGCKSKTCQPKNSDQGIAVDASLSNWLSSSVTTPPSKTSTGILGLTTPESQGSNSPKNQEDRPILGALTMEELRQFSPPPRRSPNRSPNEMPIIGTVGTYWSHSSSVEDSGPASFKRESNISGNYREEMRVK

Homology

[Close]

BLAST of Cp4.1LG05g01230 vs. NCBI nr
Match: XP_023532752.1 (eisosome protein SEG2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 521 bits (1342), Expect = 1.82e-183
Identity = 292/416 (70.19%), Postives = 292/416 (70.19%), Query Frame = 0


Query: 1   MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARD 60
           MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARD
Sbjct: 1   MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARD 60

Query: 61  RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEG----------------- 120
           RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEG                 
Sbjct: 61  RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEGYKEEKELAGISQCKSRS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 EDGSTVSSVSSYPPNHRYQNYRESDDDDDELDYADSDLDHDHVDDDDDDGDENDDIEDEE 180

Query: 181 -----------------------------------------------NACVHSVLKPVEN 240
                                                          NACVHSVLKPVEN
Sbjct: 181 YDHFSDDESGSNSAQVFADEVDSCLSVCGCPGKAEPQIGARRTARDRNACVHSVLKPVEN 240

Query: 241 ISQWKAVKVRDKHRSNPPSHKENLALNGAPRSSFGTEPSFKESSFGCKSKTCQPKNSDQG 292
           ISQWKAVKVRDKHRSNPPSHKENLALNGAPRSSFGTEPSFKESSFGCKSKTCQPKNSDQG
Sbjct: 241 ISQWKAVKVRDKHRSNPPSHKENLALNGAPRSSFGTEPSFKESSFGCKSKTCQPKNSDQG 300

[Close]

BLAST of Cp4.1LG05g01230 vs. NCBI nr
Match: KAG6606359.1 (hypothetical protein SDJN03_03676, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 508 bits (1309), Expect = 1.84e-178
Identity = 289/416 (69.47%), Postives = 291/416 (69.95%), Query Frame = 0


Query: 1   MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARD 60
           MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARD
Sbjct: 1   MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARD 60

Query: 61  RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEG----------------- 120
           RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEG                 
Sbjct: 61  RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEGYKEEKELAGISQCKSRS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 EDGSTVSSISSYPPNHRYQNYRESDDDDDDELDYADSDLDHDHVDDDDGDENDDIEYEEY 180

Query: 181 ----------------------------------------------NACVHSVLKPVENI 240
                                                         NACVHSVLKPVENI
Sbjct: 181 DHFSDDESGSSSVQVFADEVDSCLSVCGCPGKAEPQIGARRTARDRNACVHSVLKPVENI 240

Query: 241 SQWKAVKVRDKHRSNPPSHKENLALNGAPRSSFGTEPSFKESSFGCKSKTCQPKNSDQGI 292
           SQWKAVKV+DKHRSNPPSHKENLALNGAPR+SFGTEPSFKESSFGCKSKTCQPKNSDQGI
Sbjct: 241 SQWKAVKVKDKHRSNPPSHKENLALNGAPRNSFGTEPSFKESSFGCKSKTCQPKNSDQGI 300

[Close]

BLAST of Cp4.1LG05g01230 vs. NCBI nr
Match: KAG7036298.1 (hypothetical protein SDJN02_03101 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 508 bits (1308), Expect = 2.71e-178
Identity = 289/417 (69.30%), Postives = 291/417 (69.78%), Query Frame = 0


Query: 1   MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARD 60
           MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARD
Sbjct: 1   MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARD 60

Query: 61  RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEG----------------- 120
           RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEG                 
Sbjct: 61  RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEGYKEEKELAGISQCKSRS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 EDGSTVSSISSYPPNHRYQNYRESDDDDDDDELDYADSDLDHDHVDDDDGDENDDIEYEE 180

Query: 181 -----------------------------------------------NACVHSVLKPVEN 240
                                                          NACVHSVLKPVEN
Sbjct: 181 YDHFSDDESGSSSVQVFADEVDSCLSVCGCPGKAEPQIGARRTARDRNACVHSVLKPVEN 240

Query: 241 ISQWKAVKVRDKHRSNPPSHKENLALNGAPRSSFGTEPSFKESSFGCKSKTCQPKNSDQG 292
           ISQWKAVKV+DKHRSNPPSHKENLALNGAPR+SFGTEPSFKESSFGCKSKTCQPKNSDQG
Sbjct: 241 ISQWKAVKVKDKHRSNPPSHKENLALNGAPRNSFGTEPSFKESSFGCKSKTCQPKNSDQG 300

[Close]

BLAST of Cp4.1LG05g01230 vs. NCBI nr
Match: XP_022931125.1 (uncharacterized protein LOC111437397 [Cucurbita moschata])

HSP 1 Score: 504 bits (1298), Expect = 8.39e-177
Identity = 287/415 (69.16%), Postives = 290/415 (69.88%), Query Frame = 0


Query: 1   MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARD 60
           MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISK VQTSPSAVDNASDRSTSPILKARD
Sbjct: 1   MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKHVQTSPSAVDNASDRSTSPILKARD 60

Query: 61  RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEG----------------- 120
           RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLE+EG                 
Sbjct: 61  RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEREGYKEEKELAGISQCKSRS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 EDGSTVSSISSYPPNHRYQNYRESDDDDEELDYADSDLDHDHVDDGDGDENDDIEYEEYD 180

Query: 181 ---------------------------------------------NACVHSVLKPVENIS 240
                                                        NACVHSVLKPVENIS
Sbjct: 181 HFSDDESGSSSVQVFADEVDSCLSVCGCPGKAEPQIGARRTARDRNACVHSVLKPVENIS 240

Query: 241 QWKAVKVRDKHRSNPPSHKENLALNGAPRSSFGTEPSFKESSFGCKSKTCQPKNSDQGIA 292
           QWKAVKV+DKHRSNPPSHKENLALNGAPRSS+GTEPSFKESSFGCKSKTCQPKNSDQGIA
Sbjct: 241 QWKAVKVKDKHRSNPPSHKENLALNGAPRSSYGTEPSFKESSFGCKSKTCQPKNSDQGIA 300

[Close]

BLAST of Cp4.1LG05g01230 vs. NCBI nr
Match: XP_022996427.1 (eisosome protein SEG2-like [Cucurbita maxima])

HSP 1 Score: 470 bits (1209), Expect = 2.50e-163
Identity = 275/416 (66.11%), Postives = 278/416 (66.83%), Query Frame = 0


Query: 1   MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARD 60
           MGCF ACFRSSDDVKRREQRRRKVLPRI+ANAISKPVQTSPSAVDNASDRSTSPILKARD
Sbjct: 1   MGCFTACFRSSDDVKRREQRRRKVLPRIKANAISKPVQTSPSAVDNASDRSTSPILKARD 60

Query: 61  RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEG----------------- 120
           RPEELQLSPTTRKRVTFDSNVKTYELD V    E DVLLEKEG                 
Sbjct: 61  RPEELQLSPTTRKRVTFDSNVKTYELDQV----ETDVLLEKEGYKEEKELAGISQCKSRS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 EDGSTVSCISSYPPNHRYQNYRESDDDDEEELDYADSDLDHDHVDDDDGDENDDIEDEEY 180

Query: 181 ----------------------------------------------NACVHSVLKPVENI 240
                                                         NACVHSVLKPVENI
Sbjct: 181 DHFSEDESGSSSAQVFADEADSCLSVCGCPGKAEPQIGARRTARDRNACVHSVLKPVENI 240

Query: 241 SQWKAVKVRDKHRSNPPSHKENLALNGAPRSSFGTEPSFKESSFGCKSKTCQPKNSDQGI 292
           SQWKAVKV+DKHRSN P HKENLALNGAP  SFG EPSFKESSFGCKSKTCQPK SDQGI
Sbjct: 241 SQWKAVKVKDKHRSNSP-HKENLALNGAPGCSFGIEPSFKESSFGCKSKTCQPKKSDQGI 300

[Close]

BLAST of Cp4.1LG05g01230 vs. ExPASy TrEMBL
Match: A0A6J1EYL2 (uncharacterized protein LOC111437397 OS=Cucurbita moschata OX=3662 GN=LOC111437397 PE=4 SV=1)

HSP 1 Score: 504 bits (1298), Expect = 4.06e-177
Identity = 287/415 (69.16%), Postives = 290/415 (69.88%), Query Frame = 0


Query: 1   MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARD 60
           MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISK VQTSPSAVDNASDRSTSPILKARD
Sbjct: 1   MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKHVQTSPSAVDNASDRSTSPILKARD 60

Query: 61  RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEG----------------- 120
           RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLE+EG                 
Sbjct: 61  RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEREGYKEEKELAGISQCKSRS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 EDGSTVSSISSYPPNHRYQNYRESDDDDEELDYADSDLDHDHVDDGDGDENDDIEYEEYD 180

Query: 181 ---------------------------------------------NACVHSVLKPVENIS 240
                                                        NACVHSVLKPVENIS
Sbjct: 181 HFSDDESGSSSVQVFADEVDSCLSVCGCPGKAEPQIGARRTARDRNACVHSVLKPVENIS 240

Query: 241 QWKAVKVRDKHRSNPPSHKENLALNGAPRSSFGTEPSFKESSFGCKSKTCQPKNSDQGIA 292
           QWKAVKV+DKHRSNPPSHKENLALNGAPRSS+GTEPSFKESSFGCKSKTCQPKNSDQGIA
Sbjct: 241 QWKAVKVKDKHRSNPPSHKENLALNGAPRSSYGTEPSFKESSFGCKSKTCQPKNSDQGIA 300

[Close]

BLAST of Cp4.1LG05g01230 vs. ExPASy TrEMBL
Match: A0A6J1K1W2 (eisosome protein SEG2-like OS=Cucurbita maxima OX=3661 GN=LOC111491653 PE=4 SV=1)

HSP 1 Score: 470 bits (1209), Expect = 1.21e-163
Identity = 275/416 (66.11%), Postives = 278/416 (66.83%), Query Frame = 0


Query: 1   MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSPSAVDNASDRSTSPILKARD 60
           MGCF ACFRSSDDVKRREQRRRKVLPRI+ANAISKPVQTSPSAVDNASDRSTSPILKARD
Sbjct: 1   MGCFTACFRSSDDVKRREQRRRKVLPRIKANAISKPVQTSPSAVDNASDRSTSPILKARD 60

Query: 61  RPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEG----------------- 120
           RPEELQLSPTTRKRVTFDSNVKTYELD V    E DVLLEKEG                 
Sbjct: 61  RPEELQLSPTTRKRVTFDSNVKTYELDQV----ETDVLLEKEGYKEEKELAGISQCKSRS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 EDGSTVSCISSYPPNHRYQNYRESDDDDEEELDYADSDLDHDHVDDDDGDENDDIEDEEY 180

Query: 181 ----------------------------------------------NACVHSVLKPVENI 240
                                                         NACVHSVLKPVENI
Sbjct: 181 DHFSEDESGSSSAQVFADEADSCLSVCGCPGKAEPQIGARRTARDRNACVHSVLKPVENI 240

Query: 241 SQWKAVKVRDKHRSNPPSHKENLALNGAPRSSFGTEPSFKESSFGCKSKTCQPKNSDQGI 292
           SQWKAVKV+DKHRSN P HKENLALNGAP  SFG EPSFKESSFGCKSKTCQPK SDQGI
Sbjct: 241 SQWKAVKVKDKHRSNSP-HKENLALNGAPGCSFGIEPSFKESSFGCKSKTCQPKKSDQGI 300

[Close]

BLAST of Cp4.1LG05g01230 vs. ExPASy TrEMBL
Match: A0A5A7T4Q3 (Eisosome protein SEG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001580 PE=4 SV=1)

HSP 1 Score: 384 bits (986), Expect = 1.55e-130
Identity = 236/361 (65.37%), Postives = 254/361 (70.36%), Query Frame = 0


Query: 1   MGCFIACFRSSDDV-KRREQRRRKVLPRIQ-ANAISKPVQTSPSAVDNASDRSTSPILKA 60
           MGCFIACFRSS DV KRR+QRRRKVLPR Q ANA+S+ VQ SPS VD ASDRS SPILKA
Sbjct: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTANAVSQLVQVSPSTVDTASDRSISPILKA 60

Query: 61  RDRPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEA----DVLLEKEGN---------- 120
           RDR EE QL+ +TRKRVTFDSNVKTYEL+ VEAEAEA    D  L K+GN          
Sbjct: 61  RDRREE-QLNVSTRKRVTFDSNVKTYELEDVEAEAEAGAEGDAFLGKDGNKEEKDLAEIP 120

Query: 121 --------------------------------------------------ACVHSVLKPV 180
                                                             ACVHSVLKPV
Sbjct: 121 QSQCKSYSGEGSTVSSISSYPPNHSCLSVCGCPEKTEPQIGVRRTTRDRNACVHSVLKPV 180

Query: 181 ENISQWKAVKVRDKHRSNPPSHKENLALNGAPRSSFGTEPSFKESSFGCKSKTCQPKNSD 240
           ENISQWKAVKV+DKH SNPPS+KENLALNG  RSS  TEPSFK+SSFG KSK+CQPK+SD
Sbjct: 181 ENISQWKAVKVKDKHPSNPPSYKENLALNGGARSSL-TEPSFKKSSFGYKSKSCQPKSSD 240

Query: 241 QGIAVDASLSNWLSSSVTTPPSKTSTGILGLTTPESQGSNSPKNQEDRPILGALTMEELR 292
           Q IAVDASLSNWLSSS  TPPSK STGI  L TPESQGSNSPK++EDRPILGALTMEEL+
Sbjct: 241 QDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILGALTMEELK 300

[Close]

BLAST of Cp4.1LG05g01230 vs. ExPASy TrEMBL
Match: A0A1S3BHB7 (eisosome protein SEG2 OS=Cucumis melo OX=3656 GN=LOC103489846 PE=4 SV=1)

HSP 1 Score: 357 bits (916), Expect = 6.49e-119
Identity = 236/431 (54.76%), Postives = 254/431 (58.93%), Query Frame = 0


Query: 1   MGCFIACFRSSDDV-KRREQRRRKVLPRIQ-ANAISKPVQTSPSAVDNASDRSTSPILKA 60
           MGCFIACFRSS DV KRR+QRRRKVLPR Q ANA+S+ VQ SPS VD ASDRS SPILKA
Sbjct: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTANAVSQLVQVSPSTVDTASDRSISPILKA 60

Query: 61  RDRPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEA----DVLLEKEGN---------- 120
           RDR EE QL+ +TRKRVTFDSNVKTYEL+ VEAEAEA    D  L K+GN          
Sbjct: 61  RDRREE-QLNVSTRKRVTFDSNVKTYELEDVEAEAEAGAEGDAFLGKDGNKEEKDLAEIP 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 QSQCKSYSGEGSTVSSISSYPPNHRYQNCRDSDDEDELDYADSDFDHDHVDTDVDDDDDD 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 VEDEEYDNDFDDEDELIESSDKNSSDQVFADEVDSCLSVCGCPEKTEPQIGVRRTTRDRN 240

Query: 241 ACVHSVLKPVENISQWKAVKVRDKHRSNPPSHKENLALNGAPRSSFGTEPSFKESSFGCK 292
           ACVHSVLKPVENISQWKAVKV+DKH SNPPS+KENLALNG  RSS  TEPSFK+SSFG K
Sbjct: 241 ACVHSVLKPVENISQWKAVKVKDKHPSNPPSYKENLALNGGARSSL-TEPSFKKSSFGYK 300

[Close]

BLAST of Cp4.1LG05g01230 vs. ExPASy TrEMBL
Match: A0A0A0LBG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608680 PE=4 SV=1)

HSP 1 Score: 356 bits (913), Expect = 1.79e-118
Identity = 234/430 (54.42%), Postives = 256/430 (59.53%), Query Frame = 0


Query: 1   MGCFIACFRSSDDV-KRREQRRRKVLPRIQ-ANAISKPVQTSPSAVDNASDRSTSPILKA 60
           MGCFIACFRSS D+ KRR+QRRRKVLPR Q ANA+S+ VQ SPS +D ASDRS SPILKA
Sbjct: 1   MGCFIACFRSSTDLNKRRKQRRRKVLPRQQTANAVSQLVQVSPSTLDTASDRSISPILKA 60

Query: 61  RDRPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEA----------------------- 120
           RDR EE QL+P+TRKRVTFDSNVKTYEL+ VE EAEA                       
Sbjct: 61  RDRREE-QLNPSTRKRVTFDSNVKTYELEDVEVEAEAEAEAKAGGDTFFGTDGNKEEKCL 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 AEIPQSQCKSYSGEGSTVSSISSYPPNHRYQNCRDSDDEDELDYADSDLVDTDVDDDDDV 180

Query: 181 ------------DVLLE--------------------------------------KEGNA 240
                       D L+E                                      ++ NA
Sbjct: 181 VDEEYDNDFDDEDELIESSDKNSSDQVFADEVDSCLSVCGCPGKTEPQIGLRRTARDRNA 240

Query: 241 CVHSVLKPVENISQWKAVKVRDKHRSNPPSHKENLALNGAPRSSFGTEPSFKESSFGCKS 292
           CVHSVLKPVENISQWKAVKV+DK RSNPPS KEN+ALNGA RSS  TEPSFK+SSFG KS
Sbjct: 241 CVHSVLKPVENISQWKAVKVKDKLRSNPPSCKENMALNGAARSSV-TEPSFKKSSFGYKS 300

[Close]

BLAST of Cp4.1LG05g01230 vs. TAIR 10
Match: AT1G04030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7; Bacteria - 164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses - 22; Other Eukaryotes - 943 (source: NCBI BLink). )

HSP 1 Score: 116.7 bits (291), Expect = 3.1e-26
Identity = 97/245 (39.59%), Postives = 134/245 (54.69%), Query Frame = 0


Query: 64  ELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEKEGNAC-VHSVLKPVENISQWKA 123
           E  L   T++  T D   KT E+D     +   V   ++GN      VL PVEN++QWK+
Sbjct: 176 EDSLHNPTKEVYTQDIGDKTEEIDSKLRRSNETV---RDGNHYDGQGVLNPVENLTQWKS 235

Query: 124 VKVRDKHRSNPPSHKEN---LALNGAPR--SSFGTEPSFKESSFGCKSK-TCQPKN-SDQ 183
            K + + +    S KEN   +A     R  SSFGT+P   + +   K K   +PK   +Q
Sbjct: 236 AKSKGRTKQK-QSQKENSNFIADQEEKRDSSSFGTDPQIDDITLSVKPKCRIEPKKLRNQ 295

Query: 184 GIAVDASLSNWLSSSVTTPPSKTSTGILGLTTPESQGSNS------PKNQEDRPILGALT 243
            +AVDASLS WLS+S +   S+ ++  +   TPE   S S        N +DRP+L ALT
Sbjct: 296 ELAVDASLSTWLSTSES--GSECNSASMYTLTPEKLKSTSCYSKPLRINHDDRPVLCALT 355

Query: 244 MEELRQFS--PPPRRSPNRSPNEMPIIGTVGTYWSHSSSVEDSGPA-SFKRESNISGNYR 292
           +E+++QFS    PR+SP++SP+E PIIGTVG YW + S   D G A SFK   N S  YR
Sbjct: 356 LEDIKQFSATSTPRKSPSKSPDETPIIGTVGGYWGNRSKAIDCGSASSFKGIPNTSSKYR 414

[Close]

BLAST of Cp4.1LG05g01230 vs. TAIR 10
Match: AT5G44040.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-22
Identity = 76/187 (40.64%), Postives = 108/187 (57.75%), Query Frame = 0


Query: 85  ELDHVEAEAEADVLLEKEGNACVHSVLKPVENISQWKAVKVRDKHRSNPPSHKENLALNG 144
           +++ VE +    V   ++ +  V++VL P+EN+SQWKAVK + +  +     KEN+ +  
Sbjct: 231 DIERVEEKGSVSV---RDRSGYVNAVLNPIENLSQWKAVKAKGRTTTQTQPRKENVII-- 290

Query: 145 APRSSFGTEPSFKE----SSFGCKSKTCQPKNSDQGIAVDASLSNWLSSSVTTPPSKTST 204
              +SF  E    +     S   KS+    K   Q IAVDASLS WLS+S TT    +S 
Sbjct: 291 ---ASFSLESQVDDLSSTFSLNRKSRDETEKQRTQEIAVDASLSTWLSTSQTTTSGCSS- 350

Query: 205 GILGLTTPESQGSNSPKNQEDRPILGALTMEELRQFSP--PPRRSPNRSPNEMPIIGTVG 264
            +    + + + S   +  ++RPILGALT EE++QFS    PR+SP+RSP E PIIGTVG
Sbjct: 351 -VETTMSEKKKYSKLVQCHDERPILGALTAEEIKQFSATNSPRKSPSRSP-ESPIIGTVG 406

[Close]

BLAST of Cp4.1LG05g01230 vs. TAIR 10
Match: AT2G33400.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 3875 Blast hits to 2949 proteins in 323 species: Archae - 6; Bacteria - 281; Metazoa - 960; Fungi - 593; Plants - 281; Viruses - 98; Other Eukaryotes - 1656 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 6.1e-06
Identity = 34/91 (37.36%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 1  MGCFIACFRSSDDVKRREQRRRKVLPRIQANAISKPVQTSP----SAVDNASDRSTSPIL 60
          MGCF+ CF  S + KRR    RK+LPR Q     +P+ +S     S V +  ++ ++  L
Sbjct: 1  MGCFMGCFGLSSNKKRRNS-IRKILPRDQRICSYEPLLSSDPTDFSTVSDNPEKISNSNL 60

Query: 61 KAR--DRPEELQLSPTTRKRVTFDSNVKTYE 86
          ++   +  E+ +++  TRKRV FD NV+TYE
Sbjct: 61 RSEVGEEEEKKKVTKKTRKRVRFDLNVQTYE 90

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g01230 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG05g01230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532752.1	1.82e-183	70.19	eisosome protein SEG2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6606359.1	1.84e-178	69.47	hypothetical protein SDJN03_03676, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7036298.1	2.71e-178	69.30	hypothetical protein SDJN02_03101 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022931125.1	8.39e-177	69.16	uncharacterized protein LOC111437397 [Cucurbita moschata]	[more]
XP_022996427.1	2.50e-163	66.11	eisosome protein SEG2-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG05g01230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYL2	4.06e-177	69.16	uncharacterized protein LOC111437397 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1K1W2	1.21e-163	66.11	eisosome protein SEG2-like OS=Cucurbita maxima OX=3661 GN=LOC111491653 PE=4 SV=1	[more]
A0A5A7T4Q3	1.55e-130	65.37	Eisosome protein SEG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36...	[more]
A0A1S3BHB7	6.49e-119	54.76	eisosome protein SEG2 OS=Cucumis melo OX=3656 GN=LOC103489846 PE=4 SV=1	[more]
A0A0A0LBG0	1.79e-118	54.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608680 PE=4 SV=1	[more]

BLAST of Cp4.1LG05g01230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04030.1	3.1e-26	39.59	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G44040.1	1.2e-22	40.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G33400.1	6.1e-06	37.36	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 81..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..292
None	No IPR available	PANTHER	PTHR33318:SF4	RRNA BIOGENESIS PROTEIN RRP36	coord: 1..102
None	No IPR available	PANTHER	PTHR33318:SF4	RRNA BIOGENESIS PROTEIN RRP36	coord: 105..292
IPR039300	Protein JASON	PANTHER	PTHR33318	ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT	coord: 105..292
IPR039300	Protein JASON	PANTHER	PTHR33318	ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT	coord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g01230.1	Cp4.1LG05g01230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007142	male meiosis II