Homology
BLAST of Cp4.1LG04g07750 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 310.1 bits (793), Expect = 3.2e-83
Identity = 177/346 (51.16%), Postives = 234/346 (67.63%), Query Frame = 0
Query: 1 MADKVVLPLLLPNPPPSKPLISVFHHQPPSPSSPHTTLSFPPPQPQPLSSPSSPIAPLLQ 60
MADK+ LPLLLP P SKP +H T+LS PPP P+ PLL
Sbjct: 1 MADKLALPLLLPCTPSSKPYSHDQNHHISRTPFLTTSLSSPPP---------PPVEPLLH 60
Query: 61 GILHPHQDPSSPQ-THNPKSIFRTHTRKGRSR----GNPWSHHRLSTKGKQILDSLLNPE 120
+ HQ+P+S Q + S R TR G+SR G PWS+H LS +G+Q+L SL+ P
Sbjct: 61 DVF-LHQNPNSRQPISSQTSRNRNRTRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPN 120
Query: 121 LDSSYFNEILLQFFETSPVELNFTPESVSFDILGIIKGLVFRNKNEVALR------NQKD 180
DS + +L + FE PES S ++L +KGL F K ++ALR QKD
Sbjct: 121 FDSGQLDSVLSELFE----PFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKD 180
Query: 181 FASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYRE 240
+ S+L++SV+A+IIS+LGK+GR S AA++ + L+ +G +D+Y+YTSLI+A+A++GRYRE
Sbjct: 181 YQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYRE 240
Query: 241 AVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNMLI 300
AV +F K+E++G PTLITYN+ILN +GKMG PW+KI ++V+ MKS G+APD TYN LI
Sbjct: 241 AVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI 300
Query: 301 SSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRRPKE 336
+ C RGSL++EAA+VFEEMKAAGF DKVTYNALLDVYGKS RPKE
Sbjct: 301 TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
BLAST of Cp4.1LG04g07750 vs. ExPASy Swiss-Prot
Match:
O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)
HSP 1 Score: 141.7 bits (356), Expect = 1.5e-32
Identity = 110/345 (31.88%), Postives = 176/345 (51.01%), Query Frame = 0
Query: 10 LLPNPPPSKPLISVFHHQPPSPSSPHT------TLSFPPPQPQPLSSPSSPIAPLLQGIL 69
L P+ PP P+ S PPS SS + TL PPP P PS P+ LL ++
Sbjct: 5 LFPHKPP-YPIQS--KRPPPSQSSNQSIKFSSATLHLPPPSP-----PSFPLDSLLHHLV 64
Query: 70 H----PHQDPSSPQTHNPKSIFRTHTRKGR-------SRGNPWSHHRLSTKGKQILDSLL 129
H P + +S P T + + S L K +++S++
Sbjct: 65 HLSSPPPRHSNSAAARFPSLEVSTDSSSSKPILGIEIENERNGSLKLLCKKEVVLVNSIV 124
Query: 130 NPELDSSYFNEILLQFFETSPVELNFTPESVSFDILGIIKGLVFRNKNEVA-------LR 189
L L +FF++ EL T D++ ++KGL E A +
Sbjct: 125 EQPLTG------LSRFFDSVKSELLRT------DLVSLVKGLDDSGHWERAVFLFEWLVL 184
Query: 190 NQKDFASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNG 249
+ A L+ VI + + +LG++ + S AA LL ++ ++D+ AYT+++ AY+ G
Sbjct: 185 SSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTG 244
Query: 250 RYREAVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTY 309
+Y +A+ LF ++++ G +PTL+TYN+IL+ +GKMG W KI ++D M+S G+ D T
Sbjct: 245 KYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTC 304
Query: 310 NMLISSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKS 331
+ ++S+C R L +EA E F E+K+ G+ P VTYNALL V+GK+
Sbjct: 305 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329
BLAST of Cp4.1LG04g07750 vs. ExPASy Swiss-Prot
Match:
B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 1.8e-30
Identity = 101/319 (31.66%), Postives = 156/319 (48.90%), Query Frame = 0
Query: 23 VFHHQPPSPSSPHTTLSFPPPQPQPLSSPSSPIAPLLQGILHPHQDPSSPQTHNPKSIFR 82
+F ++P P+ P P P P S S P+ LL + P P+ P+
Sbjct: 8 LFPNKPTLPAGPRKRGPLLPAAPPPPSPSSLPLDSLLLHLTAPAPAPAPA----PR---- 67
Query: 83 THTRKGRSRGNPWSHHRLSTKGKQILDSLLNPELDSSYFNEILLQFFETSPVELNFTPES 142
RS P H + Q+L + SS+ L F + EL
Sbjct: 68 ------RSHQTPTPPHSFLSPDAQVLVLAI-----SSHPLPTLAAFLASRRDEL------ 127
Query: 143 VSFDILGIIKGLVFRNKNE--VALRNQKDFASILNSSVIAVIISVLGKQGRASFAASLLH 202
+ DI ++K L E +AL ++S + +++ LG++G+ +LL
Sbjct: 128 LRADITSLLKALELSGHWEWALALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLD 187
Query: 203 EL-RNNGLIIDIYAYTSLITAYASNGRYREAVMLFNKLEQEGYTPTLITYNIILNAYGKM 262
E G +D+ AYT+++ A + GRY A+ LF +L ++G PTL+TYN++L+ YG+M
Sbjct: 188 ETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRM 247
Query: 263 GMPWSKIAAIVDSMKSFGVAPDLCTYNMLISSCCRGSLYKEAAEVFEEMKAAGFIPDKVT 322
G W +I A++D M++ GV PD T + +I++CCR L EA FE++KA G P VT
Sbjct: 248 GRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVT 301
Query: 323 YNALLDVYGKSRRPKERWR 339
YNALL V+GK+ E R
Sbjct: 308 YNALLQVFGKAGNYTEALR 301
BLAST of Cp4.1LG04g07750 vs. ExPASy Swiss-Prot
Match:
Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)
HSP 1 Score: 123.6 bits (309), Expect = 4.2e-27
Identity = 54/158 (34.18%), Postives = 94/158 (59.49%), Query Frame = 0
Query: 175 NSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYREAVMLF 234
N + ++IS+LG++G + E+ + G+ +++YT+LI AY NGRY ++ L
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 235 NKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNMLISSCCR 294
++++ E +P+++TYN ++NA + G+ W + + M+ G+ PD+ TYN L+S+C
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 295 GSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRR 333
L EA VF M G +PD TY+ L++ +GK RR
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
BLAST of Cp4.1LG04g07750 vs. ExPASy Swiss-Prot
Match:
Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)
HSP 1 Score: 108.6 bits (270), Expect = 1.4e-22
Identity = 89/317 (28.08%), Postives = 149/317 (47.00%), Query Frame = 0
Query: 24 FHHQPPSPSSPHTTLSFPPPQ------PQPLSSPSSPIAPLLQGILHPHQDPSSPQTHNP 83
++H+P SS S PPP P LS P P + P D SS +
Sbjct: 87 YNHRPYGASSSPRG-SAPPPSSVATVAPAQLSQP-----PNFSPLQTPKSDLSSDFSGRR 146
Query: 84 KSIFRTHTRKGRSRGNPWSHHRLSTKGKQILDSLLNPELDSSYFNEILLQFFETSPVELN 143
+ F + GR + + H S+ + L + ++ D F+ ++L F
Sbjct: 147 STRFVSKMHFGRQKTTMATRH--SSAAEDALQNAIDFSGDDEMFHSLMLSF--------- 206
Query: 144 FTPESVSFDILGIIKGLVFRNKNEVAL-----RNQKDFASILNSSVIAVIISVLGKQGRA 203
+ S D II+ L RN+ + A+ +++ + + +IS LG+ G+
Sbjct: 207 ESKLCGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKV 266
Query: 204 SFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYREAVMLFNKLEQEGYTPTLITYNII 263
+ A + G +YA+++LI+AY +G + EA+ +FN +++ G P L+TYN +
Sbjct: 267 TIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAV 326
Query: 264 LNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNMLISSCCRGSLYKEAAEVFEEMKAAG 323
++A GK GM + ++A D M+ GV PD T+N L++ C RG L++ A +F+EM
Sbjct: 327 IDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR 386
Query: 324 FIPDKVTYNALLDVYGK 330
D +YN LLD K
Sbjct: 387 IEQDVFSYNTLLDAICK 386
BLAST of Cp4.1LG04g07750 vs. NCBI nr
Match:
XP_038888056.1 (pentatricopeptide repeat-containing protein At5g02860 [Benincasa hispida])
HSP 1 Score: 498 bits (1283), Expect = 7.64e-168
Identity = 272/347 (78.39%), Postives = 291/347 (83.86%), Query Frame = 0
Query: 1 MADKVVLPLLLPNPPPSKPLISVFHHQPPSPSSPHTTLSFPPPQPQPLSSPSSPIAPLLQ 60
MADKV LPLLLPNPPPSKPL VFHH PPSPSSP L+FPPP P SS SSPIAPLLQ
Sbjct: 1 MADKVALPLLLPNPPPSKPLFPVFHHHPPSPSSPTPPLTFPPPPQPPFSSSSSPIAPLLQ 60
Query: 61 GILHPHQDPSSPQTHNPKSIFRTHTRKGRSR----GNPWSHHRLSTKGKQILDSLLNPEL 120
+L PHQ PSS Q + PK FRT TR GRSR G PWSHHRLST+G+QILDSLLNPE
Sbjct: 61 DLL-PHQHPSSTQPYLPKPTFRTRTRIGRSRDPNRGKPWSHHRLSTRGQQILDSLLNPEF 120
Query: 121 DSSYFNEILLQFFET--SPVELNFTPESVSFDILGIIKGLVFRNKNEVALR------NQK 180
DSS NEILLQF + SP LNFT ESVSFDILGIIKGLVF KNE+ALR N++
Sbjct: 121 DSSSLNEILLQFGDNQASPEGLNFTSESVSFDILGIIKGLVFNKKNELALRVFDFFRNRE 180
Query: 181 DFASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYR 240
DFASIL+SSVIAVIISVLGK+GRASFAASLLHELRN+G+ IDIYAYTSLITAYASNGRYR
Sbjct: 181 DFASILSSSVIAVIISVLGKEGRASFAASLLHELRNDGVNIDIYAYTSLITAYASNGRYR 240
Query: 241 EAVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNML 300
EAVM+F KLE+EG PTLITYN+ILN YGKMGMPWSKIAA+VDSMK+ GV PDL TYN L
Sbjct: 241 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAALVDSMKNSGVDPDLYTYNTL 300
Query: 301 ISSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRRPKE 335
ISSC RGSLY+EAAEVFEEMKAAGF PDKVTYNALLDVYGKSRRPKE
Sbjct: 301 ISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPKE 346
BLAST of Cp4.1LG04g07750 vs. NCBI nr
Match:
KAA0031354.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06806.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 491 bits (1263), Expect = 7.37e-165
Identity = 268/347 (77.23%), Postives = 292/347 (84.15%), Query Frame = 0
Query: 1 MADKVVLPLLLPNPPPSKPLISVFHHQPPSPSSPHT-TLSFPPPQPQPLSSPSSPIAPLL 60
MADKV LPLLLPNPPPSK L VFHHQPP PSSP +L+FPPP P SS SSP+APLL
Sbjct: 1 MADKVALPLLLPNPPPSKSLFPVFHHQPPLPSSPSPPSLTFPPPPQSPPSSSSSPLAPLL 60
Query: 61 QGILHPHQDPSSP-QTHNPKSIFRTHTRKGRSR----GNPWSHHRLSTKGKQILDSLLNP 120
Q +L PHQ PSS Q H PK FRT TR GRSR G PWSHHRLST+G++ILDSLLNP
Sbjct: 61 QDLL-PHQHPSSSAQPHLPKPTFRTRTRIGRSRDPNRGKPWSHHRLSTQGQRILDSLLNP 120
Query: 121 ELDSSYFNEILLQFFETSPVELNFTPESVSFDILGIIKGLVFRNKNEVAL------RNQK 180
E DSS +EILLQ FETSP LNFT +SVSFDILGIIKGLVF KNE+AL RN++
Sbjct: 121 EFDSSSLDEILLQLFETSPDGLNFTSDSVSFDILGIIKGLVFNKKNELALGVFDFVRNRE 180
Query: 181 DFASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYR 240
DFASIL++SVIAVIISVLGK+GRASFAASLLHELRN+G+ IDIYAYTSLITAYASNGRYR
Sbjct: 181 DFASILSNSVIAVIISVLGKEGRASFAASLLHELRNDGVHIDIYAYTSLITAYASNGRYR 240
Query: 241 EAVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNML 300
EAVM+F KLE+EG PTLITYN+ILN YGKMGMPWSKI+A+VDSMKS GV PDL TYN L
Sbjct: 241 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKISALVDSMKSSGVVPDLYTYNTL 300
Query: 301 ISSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRRPKE 335
ISSC RGSLY+EAAE+FEEMKAAGF PDKVTYNALLDVYGKSRRPKE
Sbjct: 301 ISSCRRGSLYEEAAEIFEEMKAAGFSPDKVTYNALLDVYGKSRRPKE 346
BLAST of Cp4.1LG04g07750 vs. NCBI nr
Match:
XP_008455020.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Cucumis melo])
HSP 1 Score: 491 bits (1263), Expect = 1.16e-164
Identity = 268/347 (77.23%), Postives = 292/347 (84.15%), Query Frame = 0
Query: 1 MADKVVLPLLLPNPPPSKPLISVFHHQPPSPSSPHT-TLSFPPPQPQPLSSPSSPIAPLL 60
MADKV LPLLLPNPPPSK L VFHHQPP PSSP +L+FPPP P SS SSP+APLL
Sbjct: 17 MADKVALPLLLPNPPPSKSLFPVFHHQPPLPSSPSPPSLTFPPPPQSPPSSSSSPLAPLL 76
Query: 61 QGILHPHQDPSSP-QTHNPKSIFRTHTRKGRSR----GNPWSHHRLSTKGKQILDSLLNP 120
Q +L PHQ PSS Q H PK FRT TR GRSR G PWSHHRLST+G++ILDSLLNP
Sbjct: 77 QDLL-PHQHPSSSAQPHLPKPTFRTRTRIGRSRDPNRGKPWSHHRLSTQGQRILDSLLNP 136
Query: 121 ELDSSYFNEILLQFFETSPVELNFTPESVSFDILGIIKGLVFRNKNEVAL------RNQK 180
E DSS +EILLQ FETSP LNFT +SVSFDILGIIKGLVF KNE+AL RN++
Sbjct: 137 EFDSSSLDEILLQLFETSPDGLNFTSDSVSFDILGIIKGLVFNKKNELALGVFDFVRNRE 196
Query: 181 DFASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYR 240
DFASIL++SVIAVIISVLGK+GRASFAASLLHELRN+G+ IDIYAYTSLITAYASNGRYR
Sbjct: 197 DFASILSNSVIAVIISVLGKEGRASFAASLLHELRNDGVHIDIYAYTSLITAYASNGRYR 256
Query: 241 EAVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNML 300
EAVM+F KLE+EG PTLITYN+ILN YGKMGMPWSKI+A+VDSMKS GV PDL TYN L
Sbjct: 257 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKISALVDSMKSSGVVPDLYTYNTL 316
Query: 301 ISSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRRPKE 335
ISSC RGSLY+EAAE+FEEMKAAGF PDKVTYNALLDVYGKSRRPKE
Sbjct: 317 ISSCRRGSLYEEAAEIFEEMKAAGFSPDKVTYNALLDVYGKSRRPKE 362
BLAST of Cp4.1LG04g07750 vs. NCBI nr
Match:
XP_023553783.1 (pentatricopeptide repeat-containing protein At5g02860 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 475 bits (1222), Expect = 9.34e-159
Identity = 260/347 (74.93%), Postives = 286/347 (82.42%), Query Frame = 0
Query: 1 MADKVVLPLLLPNPPPSKPLISVFHHQPPSPSSPHTTLSFPPPQ--PQPLSSPSSPIAPL 60
MADKV LPLLLPNPPPSKPL SVFHHQP S SSP PPP SS SS I+P+
Sbjct: 1 MADKVALPLLLPNPPPSKPLFSVFHHQPASHSSP------PPPSLSSSSSSSSSSHISPI 60
Query: 61 LQGILHPHQDPSSPQTHNPKSIFRTHTRKGRSR----GNPWSHHRLSTKGKQILDSLLNP 120
LQ + PH+D SSP+ H PKS F++ +R GRSR G PWSHHRLST+G++I DSLLNP
Sbjct: 61 LQDLFLPHKDSSSPRPHIPKSTFKSRSRIGRSRDPNRGKPWSHHRLSTQGQRIHDSLLNP 120
Query: 121 ELDSSYFNEILLQFFETSPVELNFTPESVSFDILGIIKGLVFRNKNEVALR------NQK 180
E D+S NEILLQ FETSP LNFTPESVS DILGIIKGLVF KNE+ALR N++
Sbjct: 121 EFDASSLNEILLQLFETSPEGLNFTPESVSLDILGIIKGLVFNKKNELALRVFDFVRNRE 180
Query: 181 DFASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYR 240
DFASIL+SSVIAVIISVLGK+GRAS AASLLHELRN+G+ IDIYAYTSLITAYA+NGRYR
Sbjct: 181 DFASILSSSVIAVIISVLGKEGRASSAASLLHELRNDGVNIDIYAYTSLITAYANNGRYR 240
Query: 241 EAVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNML 300
EAVM+F KLE+EG PTLITYN+ILN YGKMGMPWSKIAA+VDSMKS G+APD TYN L
Sbjct: 241 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAALVDSMKSSGIAPDSYTYNTL 300
Query: 301 ISSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRRPKE 335
ISSC RGSLY+EAAEVFEEMKAAGF PDKVTYNALLDVYGKSRRPKE
Sbjct: 301 ISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPKE 341
BLAST of Cp4.1LG04g07750 vs. NCBI nr
Match:
KAG6571932.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 472 bits (1215), Expect = 1.05e-157
Identity = 259/347 (74.64%), Postives = 285/347 (82.13%), Query Frame = 0
Query: 1 MADKVVLPLLLPNPPPSKPLISVFHHQPPSPSSPHTTLSFPPPQ--PQPLSSPSSPIAPL 60
MADKV LPLLLPNPPPSKPL VFHHQP S SSP PPP SS SS I+P+
Sbjct: 1 MADKVALPLLLPNPPPSKPLFPVFHHQPASHSSP------PPPSLSSSSSSSSSSHISPI 60
Query: 61 LQGILHPHQDPSSPQTHNPKSIFRTHTRKGRSR----GNPWSHHRLSTKGKQILDSLLNP 120
LQ +L PH+D SSP+ H PKS F++ +R GRSR G PWSHHRLST+G++I DSLLNP
Sbjct: 61 LQDLLFPHKDSSSPRPHLPKSTFKSRSRIGRSRDPNRGKPWSHHRLSTQGQRIHDSLLNP 120
Query: 121 ELDSSYFNEILLQFFETSPVELNFTPESVSFDILGIIKGLVFRNKNEVALR------NQK 180
E D+S NEILLQ FETSP LNFT ESVS DILGIIKGLVF KNE+ALR N++
Sbjct: 121 EFDASSLNEILLQLFETSPEGLNFTSESVSLDILGIIKGLVFNKKNELALRMFDFVRNRE 180
Query: 181 DFASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYR 240
DFASIL+SSVIAVIISVLGK+GRAS AASLLHELRN+G+ IDIYAYTSLITAYA+NGRYR
Sbjct: 181 DFASILSSSVIAVIISVLGKEGRASSAASLLHELRNDGVNIDIYAYTSLITAYANNGRYR 240
Query: 241 EAVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNML 300
EAVM+F KLE+EG PTLITYN+ILN YGKMGMPWSKIAA+VDSMKS G+APD TYN L
Sbjct: 241 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAALVDSMKSSGIAPDSYTYNTL 300
Query: 301 ISSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRRPKE 335
ISSC RGSLY+EAAEVFEEMKAAGF PDKVTYNALLDVYGKSRRPKE
Sbjct: 301 ISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPKE 341
BLAST of Cp4.1LG04g07750 vs. ExPASy TrEMBL
Match:
A0A5A7SJN5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001090 PE=4 SV=1)
HSP 1 Score: 491 bits (1263), Expect = 3.57e-165
Identity = 268/347 (77.23%), Postives = 292/347 (84.15%), Query Frame = 0
Query: 1 MADKVVLPLLLPNPPPSKPLISVFHHQPPSPSSPHT-TLSFPPPQPQPLSSPSSPIAPLL 60
MADKV LPLLLPNPPPSK L VFHHQPP PSSP +L+FPPP P SS SSP+APLL
Sbjct: 1 MADKVALPLLLPNPPPSKSLFPVFHHQPPLPSSPSPPSLTFPPPPQSPPSSSSSPLAPLL 60
Query: 61 QGILHPHQDPSSP-QTHNPKSIFRTHTRKGRSR----GNPWSHHRLSTKGKQILDSLLNP 120
Q +L PHQ PSS Q H PK FRT TR GRSR G PWSHHRLST+G++ILDSLLNP
Sbjct: 61 QDLL-PHQHPSSSAQPHLPKPTFRTRTRIGRSRDPNRGKPWSHHRLSTQGQRILDSLLNP 120
Query: 121 ELDSSYFNEILLQFFETSPVELNFTPESVSFDILGIIKGLVFRNKNEVAL------RNQK 180
E DSS +EILLQ FETSP LNFT +SVSFDILGIIKGLVF KNE+AL RN++
Sbjct: 121 EFDSSSLDEILLQLFETSPDGLNFTSDSVSFDILGIIKGLVFNKKNELALGVFDFVRNRE 180
Query: 181 DFASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYR 240
DFASIL++SVIAVIISVLGK+GRASFAASLLHELRN+G+ IDIYAYTSLITAYASNGRYR
Sbjct: 181 DFASILSNSVIAVIISVLGKEGRASFAASLLHELRNDGVHIDIYAYTSLITAYASNGRYR 240
Query: 241 EAVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNML 300
EAVM+F KLE+EG PTLITYN+ILN YGKMGMPWSKI+A+VDSMKS GV PDL TYN L
Sbjct: 241 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKISALVDSMKSSGVVPDLYTYNTL 300
Query: 301 ISSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRRPKE 335
ISSC RGSLY+EAAE+FEEMKAAGF PDKVTYNALLDVYGKSRRPKE
Sbjct: 301 ISSCRRGSLYEEAAEIFEEMKAAGFSPDKVTYNALLDVYGKSRRPKE 346
BLAST of Cp4.1LG04g07750 vs. ExPASy TrEMBL
Match:
A0A1S3C150 (pentatricopeptide repeat-containing protein At5g02860 OS=Cucumis melo OX=3656 GN=LOC103495294 PE=4 SV=1)
HSP 1 Score: 491 bits (1263), Expect = 5.62e-165
Identity = 268/347 (77.23%), Postives = 292/347 (84.15%), Query Frame = 0
Query: 1 MADKVVLPLLLPNPPPSKPLISVFHHQPPSPSSPHT-TLSFPPPQPQPLSSPSSPIAPLL 60
MADKV LPLLLPNPPPSK L VFHHQPP PSSP +L+FPPP P SS SSP+APLL
Sbjct: 17 MADKVALPLLLPNPPPSKSLFPVFHHQPPLPSSPSPPSLTFPPPPQSPPSSSSSPLAPLL 76
Query: 61 QGILHPHQDPSSP-QTHNPKSIFRTHTRKGRSR----GNPWSHHRLSTKGKQILDSLLNP 120
Q +L PHQ PSS Q H PK FRT TR GRSR G PWSHHRLST+G++ILDSLLNP
Sbjct: 77 QDLL-PHQHPSSSAQPHLPKPTFRTRTRIGRSRDPNRGKPWSHHRLSTQGQRILDSLLNP 136
Query: 121 ELDSSYFNEILLQFFETSPVELNFTPESVSFDILGIIKGLVFRNKNEVAL------RNQK 180
E DSS +EILLQ FETSP LNFT +SVSFDILGIIKGLVF KNE+AL RN++
Sbjct: 137 EFDSSSLDEILLQLFETSPDGLNFTSDSVSFDILGIIKGLVFNKKNELALGVFDFVRNRE 196
Query: 181 DFASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYR 240
DFASIL++SVIAVIISVLGK+GRASFAASLLHELRN+G+ IDIYAYTSLITAYASNGRYR
Sbjct: 197 DFASILSNSVIAVIISVLGKEGRASFAASLLHELRNDGVHIDIYAYTSLITAYASNGRYR 256
Query: 241 EAVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNML 300
EAVM+F KLE+EG PTLITYN+ILN YGKMGMPWSKI+A+VDSMKS GV PDL TYN L
Sbjct: 257 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKISALVDSMKSSGVVPDLYTYNTL 316
Query: 301 ISSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRRPKE 335
ISSC RGSLY+EAAE+FEEMKAAGF PDKVTYNALLDVYGKSRRPKE
Sbjct: 317 ISSCRRGSLYEEAAEIFEEMKAAGFSPDKVTYNALLDVYGKSRRPKE 362
BLAST of Cp4.1LG04g07750 vs. ExPASy TrEMBL
Match:
A0A0A0K4H7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071530 PE=4 SV=1)
HSP 1 Score: 472 bits (1215), Expect = 1.42e-157
Identity = 265/347 (76.37%), Postives = 289/347 (83.29%), Query Frame = 0
Query: 1 MADKVVLPLLLPNPPPSKPLISVFHHQPPSPSSPHTT-LSFPPPQPQPLSSPSSPIAPLL 60
MADKV LPLLLPNPPPSK VFHHQP SPSSP L+FPP P LSS SSP+APLL
Sbjct: 1 MADKVSLPLLLPNPPPSKSHFPVFHHQPLSPSSPPPPPLTFPP-TPH-LSSASSPLAPLL 60
Query: 61 QGILHPHQDPSSP-QTHNPKSIFRTHTRKGRS----RGNPWSHHRLSTKGKQILDSLLNP 120
Q +L PHQ PSS Q H PK FRT TR GRS RG PWSHHRLST+G++ILDSLLNP
Sbjct: 61 QDLL-PHQHPSSSTQPHLPKPTFRTRTRIGRSHDPNRGKPWSHHRLSTQGQRILDSLLNP 120
Query: 121 ELDSSYFNEILLQFFETSPVELNFTPESVSFDILGIIKGLVFRNKNEVAL------RNQK 180
E DSS +EILLQ FETS LNFT +SVSFDILGIIKGLVF KNE+AL RN++
Sbjct: 121 EFDSSSLDEILLQLFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRNRE 180
Query: 181 DFASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYR 240
DFASIL++SV+AVIISVLGK+GRASFAASLLH+LRN+G+ IDIYAYTSLITAYASNGRYR
Sbjct: 181 DFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYR 240
Query: 241 EAVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNML 300
EAVM+F KLE+EG PTLITYN+ILN YGKMGMPWSKIA +VDSMKS GVAPDL TYN L
Sbjct: 241 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTL 300
Query: 301 ISSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRRPKE 335
ISSC RGSLY+EAAEVFEEMKAAGF PDKVTYNALLDVYGKSRRP+E
Sbjct: 301 ISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPRE 344
BLAST of Cp4.1LG04g07750 vs. ExPASy TrEMBL
Match:
A0A6J1GLL1 (pentatricopeptide repeat-containing protein At5g02860 OS=Cucurbita moschata OX=3662 GN=LOC111455390 PE=4 SV=1)
HSP 1 Score: 470 bits (1210), Expect = 2.87e-157
Identity = 259/347 (74.64%), Postives = 284/347 (81.84%), Query Frame = 0
Query: 1 MADKVVLPLLLPNPPPSKPLISVFHHQPPSPSSPHTTLSFPPPQ--PQPLSSPSSPIAPL 60
MADKV LPLLLPNPPPSKPL VFHHQP S SSP PPP SS SS I+P+
Sbjct: 1 MADKVALPLLLPNPPPSKPLFPVFHHQPASHSSP------PPPSLSSSSSSSSSSHISPI 60
Query: 61 LQGILHPHQDPSSPQTHNPKSIFRTHTRKGRSR----GNPWSHHRLSTKGKQILDSLLNP 120
LQ +L PH+D SSP+ H PKS F++ R GRSR G PWSHHRLST+G++I DSLLNP
Sbjct: 61 LQDLLLPHKDSSSPRPHLPKSTFKSRGRIGRSRDPNRGKPWSHHRLSTQGQRIHDSLLNP 120
Query: 121 ELDSSYFNEILLQFFETSPVELNFTPESVSFDILGIIKGLVFRNKNEVALR------NQK 180
E D+S NEILLQ FETSP LNFT ESVS DILGIIKGLVF KNE+ALR N++
Sbjct: 121 EFDASSLNEILLQLFETSPEGLNFTSESVSLDILGIIKGLVFNKKNELALRVFDFFRNRE 180
Query: 181 DFASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYR 240
DFASIL+SSVIAVIISVLGK+GRAS AASLLHELRN+G+ IDIYAYTSLITAYA+NGRYR
Sbjct: 181 DFASILSSSVIAVIISVLGKEGRASSAASLLHELRNDGVNIDIYAYTSLITAYANNGRYR 240
Query: 241 EAVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNML 300
EAVM+F KLE+EG PTLITYN+ILN YGKMGMPWSKIAA+VDSMKS G+APD TYN L
Sbjct: 241 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAALVDSMKSSGIAPDSYTYNTL 300
Query: 301 ISSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRRPKE 335
ISSC RGSLY+EAAEVFEEMKAAGF PDKVTYNALLDVYGKSRRPKE
Sbjct: 301 ISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPKE 341
BLAST of Cp4.1LG04g07750 vs. ExPASy TrEMBL
Match:
A0A6J1IBL6 (pentatricopeptide repeat-containing protein At5g02860 OS=Cucurbita maxima OX=3661 GN=LOC111471013 PE=4 SV=1)
HSP 1 Score: 463 bits (1191), Expect = 2.05e-154
Identity = 255/347 (73.49%), Postives = 282/347 (81.27%), Query Frame = 0
Query: 1 MADKVVLPLLLPNPPPSKPLISVFHHQPPSPSSPHTTLSFPPPQ--PQPLSSPSSPIAPL 60
MADKV LPLLLPNPPPSKPL VFHHQP S SSP PPP SS SS I+P+
Sbjct: 1 MADKVALPLLLPNPPPSKPLFPVFHHQPASHSSP------PPPSLSSSSSSSSSSHISPI 60
Query: 61 LQGILHPHQDPSSPQTHNPKSIFRTHTRKGRSR----GNPWSHHRLSTKGKQILDSLLNP 120
LQ +L PH+D SPQ H PKS F++ +R GRSR G PWSHHRLST+G++I DSLL+P
Sbjct: 61 LQDLLLPHKDSYSPQPHLPKSTFKSRSRIGRSRDPNRGKPWSHHRLSTQGQRIHDSLLHP 120
Query: 121 ELDSSYFNEILLQFFETSPVELNFTPESVSFDILGIIKGLVFRNKNEVALR------NQK 180
E D+S NEILLQ FETSP LNFT ESVS DI IIKGLVF KNE+ALR N++
Sbjct: 121 EFDASSLNEILLQLFETSPEGLNFTSESVSLDISAIIKGLVFNKKNELALRVFDFVRNRE 180
Query: 181 DFASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYR 240
DFASIL+SSVIAVIISVLGK+GRAS A+SLLHELRN+G+ IDIYAYTSLITAYA+NGRYR
Sbjct: 181 DFASILSSSVIAVIISVLGKEGRASSASSLLHELRNDGVNIDIYAYTSLITAYANNGRYR 240
Query: 241 EAVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNML 300
EAVM+F KLE+EG PTLITYN+ILN YGKMGMPWSKIAA+VDSMKS G+APD TYN L
Sbjct: 241 EAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAALVDSMKSSGIAPDSYTYNTL 300
Query: 301 ISSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRRPKE 335
ISSC RGSLY+EAAEVFEEMKAAGF PDKVTYNALLDVYGKSRRPKE
Sbjct: 301 ISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPKE 341
BLAST of Cp4.1LG04g07750 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 310.1 bits (793), Expect = 2.2e-84
Identity = 177/346 (51.16%), Postives = 234/346 (67.63%), Query Frame = 0
Query: 1 MADKVVLPLLLPNPPPSKPLISVFHHQPPSPSSPHTTLSFPPPQPQPLSSPSSPIAPLLQ 60
MADK+ LPLLLP P SKP +H T+LS PPP P+ PLL
Sbjct: 1 MADKLALPLLLPCTPSSKPYSHDQNHHISRTPFLTTSLSSPPP---------PPVEPLLH 60
Query: 61 GILHPHQDPSSPQ-THNPKSIFRTHTRKGRSR----GNPWSHHRLSTKGKQILDSLLNPE 120
+ HQ+P+S Q + S R TR G+SR G PWS+H LS +G+Q+L SL+ P
Sbjct: 61 DVF-LHQNPNSRQPISSQTSRNRNRTRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPN 120
Query: 121 LDSSYFNEILLQFFETSPVELNFTPESVSFDILGIIKGLVFRNKNEVALR------NQKD 180
DS + +L + FE PES S ++L +KGL F K ++ALR QKD
Sbjct: 121 FDSGQLDSVLSELFE----PFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKD 180
Query: 181 FASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYRE 240
+ S+L++SV+A+IIS+LGK+GR S AA++ + L+ +G +D+Y+YTSLI+A+A++GRYRE
Sbjct: 181 YQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYRE 240
Query: 241 AVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNMLI 300
AV +F K+E++G PTLITYN+ILN +GKMG PW+KI ++V+ MKS G+APD TYN LI
Sbjct: 241 AVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI 300
Query: 301 SSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRRPKE 336
+ C RGSL++EAA+VFEEMKAAGF DKVTYNALLDVYGKS RPKE
Sbjct: 301 TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
BLAST of Cp4.1LG04g07750 vs. TAIR 10
Match:
AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 141.7 bits (356), Expect = 1.1e-33
Identity = 110/345 (31.88%), Postives = 176/345 (51.01%), Query Frame = 0
Query: 10 LLPNPPPSKPLISVFHHQPPSPSSPHT------TLSFPPPQPQPLSSPSSPIAPLLQGIL 69
L P+ PP P+ S PPS SS + TL PPP P PS P+ LL ++
Sbjct: 5 LFPHKPP-YPIQS--KRPPPSQSSNQSIKFSSATLHLPPPSP-----PSFPLDSLLHHLV 64
Query: 70 H----PHQDPSSPQTHNPKSIFRTHTRKGR-------SRGNPWSHHRLSTKGKQILDSLL 129
H P + +S P T + + S L K +++S++
Sbjct: 65 HLSSPPPRHSNSAAARFPSLEVSTDSSSSKPILGIEIENERNGSLKLLCKKEVVLVNSIV 124
Query: 130 NPELDSSYFNEILLQFFETSPVELNFTPESVSFDILGIIKGLVFRNKNEVA-------LR 189
L L +FF++ EL T D++ ++KGL E A +
Sbjct: 125 EQPLTG------LSRFFDSVKSELLRT------DLVSLVKGLDDSGHWERAVFLFEWLVL 184
Query: 190 NQKDFASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNG 249
+ A L+ VI + + +LG++ + S AA LL ++ ++D+ AYT+++ AY+ G
Sbjct: 185 SSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTG 244
Query: 250 RYREAVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTY 309
+Y +A+ LF ++++ G +PTL+TYN+IL+ +GKMG W KI ++D M+S G+ D T
Sbjct: 245 KYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTC 304
Query: 310 NMLISSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKS 331
+ ++S+C R L +EA E F E+K+ G+ P VTYNALL V+GK+
Sbjct: 305 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329
BLAST of Cp4.1LG04g07750 vs. TAIR 10
Match:
AT1G74850.1 (plastid transcriptionally active 2 )
HSP 1 Score: 123.6 bits (309), Expect = 3.0e-28
Identity = 54/158 (34.18%), Postives = 94/158 (59.49%), Query Frame = 0
Query: 175 NSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYREAVMLF 234
N + ++IS+LG++G + E+ + G+ +++YT+LI AY NGRY ++ L
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 235 NKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNMLISSCCR 294
++++ E +P+++TYN ++NA + G+ W + + M+ G+ PD+ TYN L+S+C
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 295 GSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRR 333
L EA VF M G +PD TY+ L++ +GK RR
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
BLAST of Cp4.1LG04g07750 vs. TAIR 10
Match:
AT3G16010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 110.2 bits (274), Expect = 3.4e-24
Identity = 59/176 (33.52%), Postives = 99/176 (56.25%), Query Frame = 0
Query: 160 NEVALRNQKDFASILNSSVIAVIISVLGKQGRASFAASLLHELRNNGLIIDIYAYTSLIT 219
NE+ +++F ++ +S V AV+I GK G+ S A L +E++N G D+YAY +L++
Sbjct: 464 NELFKELKENFGNV-SSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 523
Query: 220 AYASNGRYREAVMLFNKLEQEGYTPTLITYNIILNAYGKMGMPWSKIAAIVDSMKSFGVA 279
G EA L K+E+ G + ++NIILN + + G+P + + +++K G+
Sbjct: 524 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVP-RRAIEMFETIKHSGIK 583
Query: 280 PDLCTYNMLISSCCRGSLYKEAAEVFEEMKAAGFIPDKVTYNALLDVYGKSRRPKE 336
PD TYN L+ +++EAA + EMK GF D +TY+++LD G K+
Sbjct: 584 PDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
BLAST of Cp4.1LG04g07750 vs. TAIR 10
Match:
AT2G31400.1 (genomes uncoupled 1 )
HSP 1 Score: 108.6 bits (270), Expect = 9.9e-24
Identity = 89/317 (28.08%), Postives = 149/317 (47.00%), Query Frame = 0
Query: 24 FHHQPPSPSSPHTTLSFPPPQ------PQPLSSPSSPIAPLLQGILHPHQDPSSPQTHNP 83
++H+P SS S PPP P LS P P + P D SS +
Sbjct: 87 YNHRPYGASSSPRG-SAPPPSSVATVAPAQLSQP-----PNFSPLQTPKSDLSSDFSGRR 146
Query: 84 KSIFRTHTRKGRSRGNPWSHHRLSTKGKQILDSLLNPELDSSYFNEILLQFFETSPVELN 143
+ F + GR + + H S+ + L + ++ D F+ ++L F
Sbjct: 147 STRFVSKMHFGRQKTTMATRH--SSAAEDALQNAIDFSGDDEMFHSLMLSF--------- 206
Query: 144 FTPESVSFDILGIIKGLVFRNKNEVAL-----RNQKDFASILNSSVIAVIISVLGKQGRA 203
+ S D II+ L RN+ + A+ +++ + + +IS LG+ G+
Sbjct: 207 ESKLCGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKV 266
Query: 204 SFAASLLHELRNNGLIIDIYAYTSLITAYASNGRYREAVMLFNKLEQEGYTPTLITYNII 263
+ A + G +YA+++LI+AY +G + EA+ +FN +++ G P L+TYN +
Sbjct: 267 TIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAV 326
Query: 264 LNAYGKMGMPWSKIAAIVDSMKSFGVAPDLCTYNMLISSCCRGSLYKEAAEVFEEMKAAG 323
++A GK GM + ++A D M+ GV PD T+N L++ C RG L++ A +F+EM
Sbjct: 327 IDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR 386
Query: 324 FIPDKVTYNALLDVYGK 330
D +YN LLD K
Sbjct: 387 IEQDVFSYNTLLDAICK 386
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LYZ9 | 3.2e-83 | 51.16 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
O64624 | 1.5e-32 | 31.88 | Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... | [more] |
B8Y6I0 | 1.8e-30 | 31.66 | Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457... | [more] |
Q9S7Q2 | 4.2e-27 | 34.18 | Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... | [more] |
Q9SIC9 | 1.4e-22 | 28.08 | Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
XP_038888056.1 | 7.64e-168 | 78.39 | pentatricopeptide repeat-containing protein At5g02860 [Benincasa hispida] | [more] |
KAA0031354.1 | 7.37e-165 | 77.23 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06806... | [more] |
XP_008455020.1 | 1.16e-164 | 77.23 | PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Cucumis melo] | [more] |
XP_023553783.1 | 9.34e-159 | 74.93 | pentatricopeptide repeat-containing protein At5g02860 [Cucurbita pepo subsp. pep... | [more] |
KAG6571932.1 | 1.05e-157 | 74.64 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7SJN5 | 3.57e-165 | 77.23 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3C150 | 5.62e-165 | 77.23 | pentatricopeptide repeat-containing protein At5g02860 OS=Cucumis melo OX=3656 GN... | [more] |
A0A0A0K4H7 | 1.42e-157 | 76.37 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071530 PE=4 SV=1 | [more] |
A0A6J1GLL1 | 2.87e-157 | 74.64 | pentatricopeptide repeat-containing protein At5g02860 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1IBL6 | 2.05e-154 | 73.49 | pentatricopeptide repeat-containing protein At5g02860 OS=Cucurbita maxima OX=366... | [more] |