Cp4.1LG04g06120 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g06120
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description60S ribosomal protein L7a
LocationCp4.1LG04: 5413131 .. 5416325 (+)
RNA-Seq ExpressionCp4.1LG04g06120
SyntenyCp4.1LG04g06120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTGTTTTTGCTTGGATGACTGAGCCCGAAAACTATGTATCATGATTGCATTGCTGTTATGTTTTCTGCGATTTTAAGTTTTGAAATTTCTAGATGCATTTTTTTATCGGGTTTTGAGAGAAGTTTTCCTCTCGATCGTCTGGAAAATGGTGTTTCATTTCTTGCTTTTTAAATCACGAGGTTTTGATCACTGGATCTGTTTGGCTTATATTGATATGAAGCAGTTTCTGTCGGAGGTTGATTTTGATATGTTTTTGGCTTCTTTTGAAAAATGCTTGCTAGGTAGATTGACTGAGTTGAGACTTAAGAGACATTCACTTTTTGGATTTAGCCACTTAGTGTTCTTTCATGGCCGCTCTTGGTTTTCAGGCCTTTACTACTTATTAGCATATTGATCATCATTTTATTATCAAATACAATTCATGGCAGCTACACTTGTAACATTAGCACTAATAGGCTTGAATGTAGTCCAGTTGGTAAAAGCGTCAGTTGCCTTACCTCAAGGTTATTGATTGAATTCACATCCCTTGTTTGAATTGTAGTATACTGAAAAAACACTTATGTAATCAAATTATGATAGTTGTACCTTGCAACAAAATATGAAGAAAATGGTTTTGTACAAAATTGAAGTGTTTTTATGATTTCTTTTAATCCTTTCAAGACTCTAGGAGAGATAGAAGTCTACACGTATTAAGATGTAAGATTAAATTCCTTCCTCTTCAACTTTTTGTCATTATACTTGAATCCCTCTTTGTGTATTATAGTTGATTTGTTCTCTTTATGATTTCTTAGATGTTTACATCTTTGCCTGGAATGAAATTTGCTAACATCATTTTATTGTATTTTTAAAGGCGCCAAAGAAAGCTGTTGGAAAAGCCTTGGCGAAAAAGAAGGCTGTAAGTGATTCTTTTCCTTGATGAATGTTTTCTTTTTTATTATGGTTCTGGTTTTTTTTGGCTGTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTAATACAGTGTTGTGTGTTGTTAACAGGAGAAGGTGGTGAACCCACTATTTGAGAAGCGGCCGAAGCAGTTCGGAATTGGTGGTGCATTGCCACCAAAGAGGGATTTGACAAGGTTTGTCAAATGGCCAAAAGCTGTTCAAATTCAGAGGAAGAAGAGGATTCTTAAGCAGAGGTTGAAGGTTCCACCAGCTTTGAATCAGTTCACTAAAACCCTTGACAAAAATCTTGGTAAACTATTAGATTTTAGTTGTGATTGTTGTCTAGTTCTTTTAAGGTATGCCTTTTAACCATATTGGATTAATGAGGTTCTTGTTTGACCTTGCAAATATATTTTCAAAGTTGATTACTGCTGATCATAAACTTCAGTCTCTGAATCTAGATTGCTGATTGATCCGTGCCTTCATTTTTACTGATGGGTTTTTATTACTTTTGCTTCTCACTTTGGTCAATTGGAAAAATGTAATAGAAAATTCCTCATCTGATTCCAACAATTGTGTCTGGTCAACATTTATTTTGTTTTGGTTAGATTATATGTATACTGTTTCCTTTACCTCTGTTCTTTGAATTGATATCAAGTTCAATATGTAATGTGTATACAGCCACAAACCTGTTCAAGATGCTTTTGAAGTATAGGCCAGAGGACAAGGCACAGAAAAGGGAGCGTCTTATTAAGAGAGCTCAGGAAGAGGCTGAAGGCAAGCCACATGATGCCAAGAAACCTATTGTTGTTAAATACGGTCTCAACCATGTCACCTATCTCATTGAGCAGGTTTTATTTTGTTCGGTCGTCGTACATTTGAATATTTTCGTTATCCAACTGTTATACTGCCTGGAATCATATATACTCATGATGTGAACTTCCTTTCCAGAACAAGGCACAGTTGGTGGTGATCGCCCATGATGTGGATCCAATTGAGCTCGTTGTTTGGCTCCCGGCCCTCTGCAGGAAGATGGAAATTCCATACTGCATTGTTAAGGGAAAAGCACGATTGGGAGCGGTAATACGACCGTTTATTTGCGATACGTTCCACTCTTTTGAATCGCAAGTACCAATGCTTTTAATTTTTCCCTTATAACAGATTGTCCATCAAAAGACAGCATCAGTTTTGTGCTTGACAACCGTGAAGAACGAAGATAAGTTGGAGTTCAGCAGGATCCTCGAAGCTATTAAGGTGATTTACGTAATCCTTTTCGTCGCTTCTTAGCTAACGTTGCGATTTGATTGGCGTAGTTTTAATATCGCGTCGGTTGTTTGATTTAGGCCAATTTCAACGACAAGTACGACGAGTACAGGAAGAAATGGGGTGGTGGAATCATGGGTTCCAAGTCCCAGGCTAAAACTAAAGCAAAGGAGAGGCTTCTCGCCAAAGAAGCTGCTCAAAGAATGTCTTAGAGATGAGAGTTGGCAACTATTTTTGGGTCATAGCTTCTTCAACATCATCATGAGAGAATTTAGAAGTTTTGTTTACTTTTCTTCATTTGCTACTCATTTGCTGATTTCAGATCTAGTTTTGTTGTTGCAGACTCTTTTAATGGTTAATACTTTTGATCTCAAATCCTCACACAAAGATGTTCGACTATAGGATGGGGATGGGGAAGCCTTCTTCGACCCTGTCACGTATTTCATTTCTCCATCTCCATAAAAGTATTCATTTATTTTCAAGGATTGGTTTTTTTGGGAATCCCGTGGGGATGGAGAAGCCTTCTTCGTCTTCATCCTTGTGGAGAGTTTGTGAGGATCCCGAGTGGATGGATAAGTGTTCTTCGTCCCGAAATCTTCTTTTATTTTTGTTTATCACTCATGCTAAGAAGGAAGGCCTGGATGATTTGCTCAAACTTAGTTCCAGTATTTGCCCTTCCTTTGATCCGCTCAAACTCGTTTCAGTATTTACCTTCCTTTAAATGCCTGAGTGAGTTCGCCCCTCCATCTGTGGAAACTGAGGATGAGTCCAATATTAGGGCATTAAACTGCAATATCTTAGGCTATTTCGAAACAACTGCAATA

mRNA sequence

ATGAATGCGCCAAAGAAAGCTGTTGGAAAAGCCTTGGCGAAAAAGAAGGCTGAGAAGGTGGTGAACCCACTATTTGAGAAGCGGCCGAAGCAGTTCGGAATTGGTGGTGCATTGCCACCAAAGAGGGATTTGACAAGGCCAGAGGACAAGGCACAGAAAAGGGAGCGTCTTATTAAGAGAGCTCAGGAAGAGGCTGAAGGCAAGCCACATGATGCCAAGAAACCTATTGTTGTTAAATACGGTCTCAACCATGTCACCTATCTCATTGAGCAGAACAAGGCACAGTTGGTGGTGATCGCCCATGATGTGGATCCAATTGAGCTCGTTGTTTGGCTCCCGGCCCTCTGCAGGAAGATGGAAATTCCATACTGCATTGTTAAGGGAAAAGCACGATTGGGAGCGATTGTCCATCAAAAGACAGCATCAGTTTTGTGCTTGACAACCGTGAAGAACGAAGATAAGTTGGAGTTCAGCAGGATCCTCGAAGCTATTAAGGCCAATTTCAACGACAAGTACGACGAGTACAGGAAGAAATGGGGTGGTGGAATCATGGGTTCCAAGTCCCAGGCTAAAACTAAAGCAAAGGAGAGGCTTCTCGCCAAAGAAGCTGCTCAAAGAATGTCTTAGAGATGAGAGTTGGCAACTATTTTTGGGTCATAGCTTCTTCAACATCATCATGAGAGAATTTAGAAGTTTTGTTTACTTTTCTTCATTTGCTACTCATTTGCTGATTTCAGATCTAGTTTTGTTGTTGCAGACTCTTTTAATGGTTAATACTTTTGATCTCAAATCCTCACACAAAGATGTTCGACTATAGGATGGGGATGGGGAAGCCTTCTTCGACCCTGTCACGTATTTCATTTCTCCATCTCCATAAAAGTATTCATTTATTTTCAAGGATTGGTTTTTTTGGGAATCCCGTGGGGATGGAGAAGCCTTCTTCGTCTTCATCCTTGTGGAGAGTTTGTGAGGATCCCGAGTGGATGGATAAGTGTTCTTCGTCCCGAAATCTTCTTTTATTTTTGTTTATCACTCATGCTAAGAAGGAAGGCCTGGATGATTTGCTCAAACTTAGTTCCAGTATTTGCCCTTCCTTTGATCCGCTCAAACTCGTTTCAGTATTTACCTTCCTTTAAATGCCTGAGTGAGTTCGCCCCTCCATCTGTGGAAACTGAGGATGAGTCCAATATTAGGGCATTAAACTGCAATATCTTAGGCTATTTCGAAACAACTGCAATA

Coding sequence (CDS)

ATGAATGCGCCAAAGAAAGCTGTTGGAAAAGCCTTGGCGAAAAAGAAGGCTGAGAAGGTGGTGAACCCACTATTTGAGAAGCGGCCGAAGCAGTTCGGAATTGGTGGTGCATTGCCACCAAAGAGGGATTTGACAAGGCCAGAGGACAAGGCACAGAAAAGGGAGCGTCTTATTAAGAGAGCTCAGGAAGAGGCTGAAGGCAAGCCACATGATGCCAAGAAACCTATTGTTGTTAAATACGGTCTCAACCATGTCACCTATCTCATTGAGCAGAACAAGGCACAGTTGGTGGTGATCGCCCATGATGTGGATCCAATTGAGCTCGTTGTTTGGCTCCCGGCCCTCTGCAGGAAGATGGAAATTCCATACTGCATTGTTAAGGGAAAAGCACGATTGGGAGCGATTGTCCATCAAAAGACAGCATCAGTTTTGTGCTTGACAACCGTGAAGAACGAAGATAAGTTGGAGTTCAGCAGGATCCTCGAAGCTATTAAGGCCAATTTCAACGACAAGTACGACGAGTACAGGAAGAAATGGGGTGGTGGAATCATGGGTTCCAAGTCCCAGGCTAAAACTAAAGCAAAGGAGAGGCTTCTCGCCAAAGAAGCTGCTCAAAGAATGTCTTAG

Protein sequence

MNAPKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRPEDKAQKRERLIKRAQEEAEGKPHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS
Homology
[Close]
BLAST of Cp4.1LG04g06120 vs. ExPASy Swiss-Prot
Match: P49692 (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2)

HSP 1 Score: 331.6 bits (849), Expect = 6.2e-90
Identity = 179/256 (69.92%), Postives = 195/256 (76.17%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLT----------------- 62
           APKK V  A  KK AEKV NPLFE+RPKQFGIGGALPPK+DL+                 
Sbjct: 2   APKKGVKVAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRI 61

Query: 63  ---------------------------------RPEDKAQKRERLIKRAQEEAEGKPHDA 122
                                            RPEDKA K+ERL+K+AQ EAEGKP ++
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSES 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 209
           GA+VHQKTAS LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. ExPASy Swiss-Prot
Match: Q9LZH9 (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.2e-88
Identity = 177/256 (69.14%), Postives = 195/256 (76.17%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLT----------------- 62
           APKK V K  +KKK EKV NPLFE+RPKQFGIGGALPPK+DL+                 
Sbjct: 2   APKKGV-KVASKKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRI 61

Query: 63  ---------------------------------RPEDKAQKRERLIKRAQEEAEGKPHDA 122
                                            RPEDKA K+ERL+ +AQ EAEGKP ++
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAES 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 209
           GA+VHQKTA+ LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. ExPASy Swiss-Prot
Match: P35685 (60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.4e-86
Identity = 179/258 (69.38%), Postives = 195/258 (75.58%), Query Frame = 0 

Query: 3   APKKAVGKA--LAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDL---------------- 62
           APK+  G+A   AKKK EKV NPLFEKRPKQFGIGGALPPK+DL                
Sbjct: 2   APKRG-GRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQR 61

Query: 63  ----------------------------------TRPEDKAQKRERLIKRAQEEAEGKPH 122
                                              RPEDKA K+ERL+KRAQ EAEGK  
Sbjct: 62  RILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTV 121

Query: 123 DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKA 182
           +AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKA
Sbjct: 122 EAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKA 181

Query: 183 RLGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQA 209
           RLG+IVH+KTASVLCLTTVKNEDKLEFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQA
Sbjct: 182 RLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQA 241

[Close]
BLAST of Cp4.1LG04g06120 vs. ExPASy Swiss-Prot
Match: P0DKK7 (60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.4e-86
Identity = 179/258 (69.38%), Postives = 195/258 (75.58%), Query Frame = 0 

Query: 3   APKKAVGKA--LAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDL---------------- 62
           APK+  G+A   AKKK EKV NPLFEKRPKQFGIGGALPPK+DL                
Sbjct: 2   APKRG-GRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQR 61

Query: 63  ----------------------------------TRPEDKAQKRERLIKRAQEEAEGKPH 122
                                              RPEDKA K+ERL+KRAQ EAEGK  
Sbjct: 62  RILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTV 121

Query: 123 DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKA 182
           +AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKA
Sbjct: 122 EAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKA 181

Query: 183 RLGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQA 209
           RLG+IVH+KTASVLCLTTVKNEDKLEFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQA
Sbjct: 182 RLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQA 241

[Close]
BLAST of Cp4.1LG04g06120 vs. ExPASy Swiss-Prot
Match: Q2TBQ5 (60S ribosomal protein L7a OS=Bos taurus OX=9913 GN=RPL7A PE=2 SV=3)

HSP 1 Score: 203.0 bits (515), Expect = 3.3e-51
Identity = 119/261 (45.59%), Postives = 158/261 (60.54%), Query Frame = 0 

Query: 5   KKAVGKALA-------KKKAEKVVNPLFEKRPKQFGIGGALPPKRDLT------------ 64
           KKA GK +A       K++A+KVVNPLFEKRPK FGIG  + PKRDLT            
Sbjct: 5   KKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQ 64

Query: 65  --------------------------------------RPEDKAQKRERLIKRAQEEAEG 124
                                                 RPE K +K++RL+ RA+++A G
Sbjct: 65  RQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAG 124

Query: 125 KPH-DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIV 184
           K     K+P V++ G+N VT L+E  KAQLVVIAHDVDPIELVV+LPALCRKM +PYCI+
Sbjct: 125 KGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCII 184

Query: 185 KGKARLGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGS 208
           KGKARLG +VH+KT + +  T V +EDK   ++++EAI+ N+ND+YDE R+ WGG ++G 
Sbjct: 185 KGKARLGRLVHRKTCTTVAFTQVNSEDKSALAKLVEAIRTNYNDRYDEIRRHWGGNVLGP 244

[Close]
BLAST of Cp4.1LG04g06120 vs. NCBI nr
Match: XP_022928506.1 (60S ribosomal protein L7a-1 [Cucurbita moschata] >XP_022989710.1 60S ribosomal protein L7a-1 [Cucurbita maxima] >XP_023531601.1 60S ribosomal protein L7a-1 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531602.1 60S ribosomal protein L7a-1 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6588885.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022649.1 60S ribosomal protein L7a-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370 bits (951), Expect = 7.39e-128
Identity = 206/256 (80.47%), Postives = 206/256 (80.47%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTR---------------- 62
           APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTR                
Sbjct: 2   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 63  ----------------------------------PEDKAQKRERLIKRAQEEAEGKPHDA 122
                                             PEDKAQKRERLIKRAQEEAEGKPHDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHDA 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 208
           GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. NCBI nr
Match: XP_022983551.1 (60S ribosomal protein L7a-2-like [Cucurbita maxima])

HSP 1 Score: 365 bits (937), Expect = 1.00e-125
Identity = 203/256 (79.30%), Postives = 204/256 (79.69%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTR---------------- 62
           APKKAVGKALAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTR                
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 63  ----------------------------------PEDKAQKRERLIKRAQEEAEGKPHDA 122
                                             PEDKAQKRERL+KRAQEEAEGK HDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLVKRAQEEAEGKAHDA 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 208
           GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. NCBI nr
Match: XP_022928907.1 (60S ribosomal protein L7a-2 isoform X2 [Cucurbita moschata] >XP_022970186.1 60S ribosomal protein L7a-2 [Cucurbita maxima] >XP_022970187.1 60S ribosomal protein L7a-2 [Cucurbita maxima] >XP_023551211.1 60S ribosomal protein L7a-2 [Cucurbita pepo subsp. pepo] >KAG7017115.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365 bits (936), Expect = 1.42e-125
Identity = 203/256 (79.30%), Postives = 204/256 (79.69%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTR---------------- 62
           APKKAVGKALAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTR                
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 63  ----------------------------------PEDKAQKRERLIKRAQEEAEGKPHDA 122
                                             PEDKAQKRERL+KRAQEEAEGK HDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDA 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 208
           GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. NCBI nr
Match: XP_022934368.1 (60S ribosomal protein L7a-2 [Cucurbita moschata] >XP_023527406.1 60S ribosomal protein L7a-2 [Cucurbita pepo subsp. pepo] >KAG6581109.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017841.1 60S ribosomal protein L7a-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365 bits (936), Expect = 1.42e-125
Identity = 203/256 (79.30%), Postives = 204/256 (79.69%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTR---------------- 62
           APKKAVGKALAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTR                
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 63  ----------------------------------PEDKAQKRERLIKRAQEEAEGKPHDA 122
                                             PEDKAQKRERL+KRAQEEAEGK HDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKAHDA 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 208
           GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. NCBI nr
Match: KAG6579663.1 (60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 363 bits (933), Expect = 4.08e-125
Identity = 202/256 (78.91%), Postives = 204/256 (79.69%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTR---------------- 62
           APKKAVGKAL+KKK EKVVNPLFEKRPKQFGIGGALPPKRDLTR                
Sbjct: 2   APKKAVGKALSKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 63  ----------------------------------PEDKAQKRERLIKRAQEEAEGKPHDA 122
                                             PEDKAQKRERL+KRAQEEAEGK HDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDA 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 208
           GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. ExPASy TrEMBL
Match: A0A6J1JN50 (60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111486710 PE=3 SV=1)

HSP 1 Score: 370 bits (951), Expect = 3.58e-128
Identity = 206/256 (80.47%), Postives = 206/256 (80.47%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTR---------------- 62
           APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTR                
Sbjct: 2   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 63  ----------------------------------PEDKAQKRERLIKRAQEEAEGKPHDA 122
                                             PEDKAQKRERLIKRAQEEAEGKPHDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHDA 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 208
           GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. ExPASy TrEMBL
Match: A0A6J1EKG8 (60S ribosomal protein L7a OS=Cucurbita moschata OX=3662 GN=LOC111435292 PE=3 SV=1)

HSP 1 Score: 370 bits (951), Expect = 3.58e-128
Identity = 206/256 (80.47%), Postives = 206/256 (80.47%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTR---------------- 62
           APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTR                
Sbjct: 2   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 63  ----------------------------------PEDKAQKRERLIKRAQEEAEGKPHDA 122
                                             PEDKAQKRERLIKRAQEEAEGKPHDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLIKRAQEEAEGKPHDA 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 208
           GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. ExPASy TrEMBL
Match: A0A6J1J2M5 (60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111482120 PE=3 SV=1)

HSP 1 Score: 365 bits (937), Expect = 4.85e-126
Identity = 203/256 (79.30%), Postives = 204/256 (79.69%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTR---------------- 62
           APKKAVGKALAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTR                
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 63  ----------------------------------PEDKAQKRERLIKRAQEEAEGKPHDA 122
                                             PEDKAQKRERL+KRAQEEAEGK HDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLVKRAQEEAEGKAHDA 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 208
           GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. ExPASy TrEMBL
Match: A0A6J1HZX8 (60S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111469156 PE=3 SV=1)

HSP 1 Score: 365 bits (936), Expect = 6.89e-126
Identity = 203/256 (79.30%), Postives = 204/256 (79.69%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTR---------------- 62
           APKKAVGKALAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTR                
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 63  ----------------------------------PEDKAQKRERLIKRAQEEAEGKPHDA 122
                                             PEDKAQKRERL+KRAQEEAEGK HDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDA 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 208
           GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. ExPASy TrEMBL
Match: A0A6J1EL96 (60S ribosomal protein L7a OS=Cucurbita moschata OX=3662 GN=LOC111435676 PE=3 SV=1)

HSP 1 Score: 365 bits (936), Expect = 6.89e-126
Identity = 203/256 (79.30%), Postives = 204/256 (79.69%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLTR---------------- 62
           APKKAVGKALAKKK EKVVNPLFEKRPKQFGIGGALPPKRDLTR                
Sbjct: 2   APKKAVGKALAKKKPEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 61

Query: 63  ----------------------------------PEDKAQKRERLIKRAQEEAEGKPHDA 122
                                             PEDKAQKRERL+KRAQEEAEGK HDA
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDA 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 208
           GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. TAIR 10
Match: AT2G47610.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 331.6 bits (849), Expect = 4.4e-91
Identity = 179/256 (69.92%), Postives = 195/256 (76.17%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLT----------------- 62
           APKK V  A  KK AEKV NPLFE+RPKQFGIGGALPPK+DL+                 
Sbjct: 2   APKKGVKVAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRI 61

Query: 63  ---------------------------------RPEDKAQKRERLIKRAQEEAEGKPHDA 122
                                            RPEDKA K+ERL+K+AQ EAEGKP ++
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSES 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 209
           GA+VHQKTAS LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. TAIR 10
Match: AT3G62870.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 327.4 bits (838), Expect = 8.3e-90
Identity = 177/256 (69.14%), Postives = 195/256 (76.17%), Query Frame = 0 

Query: 3   APKKAVGKALAKKKAEKVVNPLFEKRPKQFGIGGALPPKRDLT----------------- 62
           APKK V K  +KKK EKV NPLFE+RPKQFGIGGALPPK+DL+                 
Sbjct: 2   APKKGV-KVASKKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRI 61

Query: 63  ---------------------------------RPEDKAQKRERLIKRAQEEAEGKPHDA 122
                                            RPEDKA K+ERL+ +AQ EAEGKP ++
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAES 121

Query: 123 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 182
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRL 181

Query: 183 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 209
           GA+VHQKTA+ LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKT 241

[Close]
BLAST of Cp4.1LG04g06120 vs. TAIR 10
Match: AT4G22380.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.8e-04
Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0 

Query: 78  VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 137
           +K G N  T  + +  ++ VV+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94

Query: 138 QKTASVLCLTTVKNEDKLE 157
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

[Close]
BLAST of Cp4.1LG04g06120 vs. TAIR 10
Match: AT4G12600.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.8e-04
Identity = 21/79 (26.58%), Postives = 37/79 (46.84%), Query Frame = 0 

Query: 78  VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 137
           +K G N  T  + +  ++ +V+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFIVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACD 94

Query: 138 QKTASVLCLTTVKNEDKLE 157
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

[Close]
BLAST of Cp4.1LG04g06120 vs. TAIR 10
Match: AT5G20160.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.8e-04
Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0 

Query: 78  VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 137
           +K G N  T  + +  ++ VV+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94

Query: 138 QKTASVLCLTTVKNEDKLE 157
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g06120 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P496926.2e-9069.9260S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2[more]
Q9LZH91.2e-8869.1460S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1[more]
P356852.4e-8669.3860S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 ... [more]
P0DKK72.4e-8669.3860S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 ... [more]
Q2TBQ53.3e-5145.5960S ribosomal protein L7a OS=Bos taurus OX=9913 GN=RPL7A PE=2 SV=3[more]
BLAST of Cp4.1LG04g06120 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022928506.17.39e-12880.4760S ribosomal protein L7a-1 [Cucurbita moschata] >XP_022989710.1 60S ribosomal p... [more]
XP_022983551.11.00e-12579.3060S ribosomal protein L7a-2-like [Cucurbita maxima][more]
XP_022928907.11.42e-12579.3060S ribosomal protein L7a-2 isoform X2 [Cucurbita moschata] >XP_022970186.1 60S ... [more]
XP_022934368.11.42e-12579.3060S ribosomal protein L7a-2 [Cucurbita moschata] >XP_023527406.1 60S ribosomal p... [more]
KAG6579663.14.08e-12578.9160S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Cp4.1LG04g06120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JN503.58e-12880.4760S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111486710 PE=3 SV=1[more]
A0A6J1EKG83.58e-12880.4760S ribosomal protein L7a OS=Cucurbita moschata OX=3662 GN=LOC111435292 PE=3 SV=... [more]
A0A6J1J2M54.85e-12679.3060S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111482120 PE=3 SV=1[more]
A0A6J1HZX86.89e-12679.3060S ribosomal protein L7a OS=Cucurbita maxima OX=3661 GN=LOC111469156 PE=3 SV=1[more]
A0A6J1EL966.89e-12679.3060S ribosomal protein L7a OS=Cucurbita moschata OX=3662 GN=LOC111435676 PE=3 SV=... [more]
BLAST of Cp4.1LG04g06120 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G47610.14.4e-9169.92Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [more]
AT3G62870.18.3e-9069.14Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [more]
AT4G22380.11.8e-0427.85Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [more]
AT4G12600.11.8e-0426.58Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [more]
AT5G20160.11.8e-0427.85Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001921Ribosomal protein L7A/L8PRINTSPR00882RIBOSOMALL7Acoord: 40..53
score: 36.36
coord: 74..94
score: 62.77
coord: 135..159
score: 48.36
coord: 167..187
score: 68.4
IPR018492Ribosomal protein L7Ae/L8/Nhp2 familyPRINTSPR00881L7ARS6FAMILYcoord: 97..110
score: 71.43
coord: 78..92
score: 45.76
coord: 113..123
score: 64.46
coord: 123..137
score: 56.36
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 65..155
e-value: 9.7E-26
score: 89.4
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 42..202
e-value: 1.5E-63
score: 215.5
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 43..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..55
NoneNo IPR availablePANTHERPTHR23105:SF168BNAA03G47020D PROTEINcoord: 49..206
coord: 2..46
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 2..46
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 49..206
IPR004037Ribosomal protein L7Ae conserved sitePROSITEPS01082RIBOSOMAL_L7AEcoord: 116..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g06120.1Cp4.1LG04g06120.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000470 maturation of LSU-rRNA
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:1990904 ribonucleoprotein complex
molecular_function GO:0003723 RNA binding