Cp4.1LG03g09050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g09050
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Calcium-binding EF-hand
Location	Cp4.1LG03: 5710466 .. 5711440 (-)
RNA-Seq Expression	Cp4.1LG03g09050
Synteny	Cp4.1LG03g09050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATCTCACGACCGAGTCACCGACTTACCACCACTCACACACCAGTGGAGAGAAAAACATCAACACAGAGAAAGAGGAATGGCCGTGGTCGTAATCGACGGATCTACGGTGCGAAACTTCGTGAACGACGAATCTCATTTCAAGAAGAGCGTGGACGAAGCCTTCGCCTCTCTGGATCTGAACAACGATGGCGTTCTGTCTCGATCCGAACTCCGCAAGGCCTTCGAGACACTCCGCCTGATCGAGACTCACTTCGGCGTCGACGTCGTCACTCCGCCGGAGAAACTCACTCAACTCTACGATTCGATCTTCGAGCAGTTTGATTGCGACAAAAGCGGCACCGTCGATGCAGAAGAATTTCGGACGGAGATGAAGAACATTTTGCTCGCAATCGCCGATGGATTAGGCTCGTCTCCGATTCAGATGGCGCTCGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCAGATCTGGAGGCTTCAAAGCTCGCTCAATCGTCGGCCTGATCGCGATTTCTAGGTTTGCCGTTTCCGTTTCTTTTTTACTCCTTTTTCTTTAAATTTCTGTTATCTATATGAAGATGTTTGAATCTGATTCCACAATAAAATAGATCCTGATTCGCCGTTTATGAAGGAAAGAGCGATTCAGATTTAAACCTGTGGAGAGAAAAACGAGCAGATGAAGAACGAACAGGATCAATATCTAGGAACAATGTAAAATGGAGAGAATAAACGTTTGCTGGAGTTTTTTTTGTGGAGCAATTTATTCTGGAATTTATATCGGTGTTTGCTTGTTCGTTCGCGATTTTCCGCTTTTTCCGATTGAAATCGAGGCATGGGCTCACCCACTGGTCCATCGAAACAGGCTTCTCCAGGCCTCAGAAAATCGCAGACGCATCCATTTGATTTTTCTTAATTTAGGACCATTTTTTTTAGGCTAAATTATACCCAAAAAAAAAAAAAAAAAAAAAAAA

mRNA sequence

TTTATCTCACGACCGAGTCACCGACTTACCACCACTCACACACCAGTGGAGAGAAAAACATCAACACAGAGAAAGAGGAATGGCCGTGGTCGTAATCGACGGATCTACGGTGCGAAACTTCGTGAACGACGAATCTCATTTCAAGAAGAGCGTGGACGAAGCCTTCGCCTCTCTGGATCTGAACAACGATGGCGTTCTGTCTCGATCCGAACTCCGCAAGGCCTTCGAGACACTCCGCCTGATCGAGACTCACTTCGGCGTCGACGTCGTCACTCCGCCGGAGAAACTCACTCAACTCTACGATTCGATCTTCGAGCAGTTTGATTGCGACAAAAGCGGCACCGTCGATGCAGAAGAATTTCGGACGGAGATGAAGAACATTTTGCTCGCAATCGCCGATGGATTAGGCTCGTCTCCGATTCAGATGGCGCTCGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCAGATCTGGAGGCTTCAAAGCTCGCTCAATCATCCTGATTCGCCGTTTATGAAGGAAAGAGCGATTCAGATTTAAACCTGTGGAGAGAAAAACGAGCAGATGAAGAACGAACAGGATCAATATCTAGGAACAATGTAAAATGGAGAGAATAAACGTTTGCTGGAGTTTTTTTTGTGGAGCAATTTATTCTGGAATTTATATCGGTGTTTGCTTGTTCGTTCGCGATTTTCCGCTTTTTCCGATTGAAATCGAGGCATGGGCTCACCCACTGGTCCATCGAAACAGGCTTCTCCAGGCCTCAGAAAATCGCAGACGCATCCATTTGATTTTTCTTAATTTAGGACCATTTTTTTTAGGCTAAATTATACCCAAAAAAAAAAAAAAAAAAAAAAAA

Coding sequence (CDS)

ATGGCCGTGGTCGTAATCGACGGATCTACGGTGCGAAACTTCGTGAACGACGAATCTCATTTCAAGAAGAGCGTGGACGAAGCCTTCGCCTCTCTGGATCTGAACAACGATGGCGTTCTGTCTCGATCCGAACTCCGCAAGGCCTTCGAGACACTCCGCCTGATCGAGACTCACTTCGGCGTCGACGTCGTCACTCCGCCGGAGAAACTCACTCAACTCTACGATTCGATCTTCGAGCAGTTTGATTGCGACAAAAGCGGCACCGTCGATGCAGAAGAATTTCGGACGGAGATGAAGAACATTTTGCTCGCAATCGCCGATGGATTAGGCTCGTCTCCGATTCAGATGGCGCTCGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCAGATCTGGAGGCTTCAAAGCTCGCTCAATCATCCTGA

Protein sequence

MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS

Homology

[Close]

BLAST of Cp4.1LG03g09050 vs. ExPASy Swiss-Prot
Match: Q86JE1 (Recoverin family protein DDB_G0272130 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0272130 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 7.9e-04
Identity = 28/80 (35.00%), Postives = 39/80 (48.75%), Query Frame = 0


Query: 25  VDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLT----------QLY 84
           VD +F  +DLN DG +S+ ELR      + +E +   D   P +KLT          Q  
Sbjct: 95  VDTSFHCMDLNGDGNISKGELRAVVMMNKKMEKYIQNDKKVPLDKLTLLPIEVSKINQEA 154

Query: 85  DSIFEQFDCDKSGTVDAEEF 95
           D +F Q D +K G V  +EF
Sbjct: 155 DDLFLQLDVNKDGGVSKQEF 174

[Close]

BLAST of Cp4.1LG03g09050 vs. NCBI nr
Match: XP_023526874.1 (uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271 bits (693), Expect = 1.87e-91
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 141
           GDQSFLKQAADLEASKLAQSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Cp4.1LG03g09050 vs. NCBI nr
Match: XP_022983603.1 (uncharacterized protein LOC111482160 [Cucurbita maxima] >XP_022983604.1 uncharacterized protein LOC111482160 [Cucurbita maxima])

HSP 1 Score: 270 bits (690), Expect = 5.35e-91
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHFKKSVDEAFA+LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 141
           GDQSFLKQAADLEASKLAQSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Cp4.1LG03g09050 vs. NCBI nr
Match: KAG7018108.1 (hypothetical protein SDJN02_19976, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268 bits (686), Expect = 2.11e-90
Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHFKKSVDEAFA+LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVVTPPEKLTQLYDSIFE+FDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 141
           GDQSFLKQAADLEASKLAQSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Cp4.1LG03g09050 vs. NCBI nr
Match: XP_022934103.1 (uncharacterized protein LOC111441377 [Cucurbita moschata] >KAG6581608.1 hypothetical protein SDJN03_21610, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268 bits (686), Expect = 2.18e-90
Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHFKKSVDEAFA+LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVVTPPEKLTQLYDSIFE+FDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 141
           GDQSFLKQAADLEASKLAQSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Cp4.1LG03g09050 vs. NCBI nr
Match: XP_038905172.1 (uncharacterized protein LOC120091281 [Benincasa hispida])

HSP 1 Score: 262 bits (670), Expect = 6.00e-88
Identity = 135/141 (95.74%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHFKKS+DEAFA+LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSIDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T PE+LTQLYDSIFEQFDCDKSGTVDA+EFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVTTTPEQLTQLYDSIFEQFDCDKSGTVDADEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 141
           GDQSFLKQAADLEASKLAQSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Cp4.1LG03g09050 vs. ExPASy TrEMBL
Match: A0A6J1J7W5 (uncharacterized protein LOC111482160 OS=Cucurbita maxima OX=3661 GN=LOC111482160 PE=4 SV=1)

HSP 1 Score: 270 bits (690), Expect = 2.59e-91
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHFKKSVDEAFA+LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 141
           GDQSFLKQAADLEASKLAQSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Cp4.1LG03g09050 vs. ExPASy TrEMBL
Match: A0A6J1F6Q4 (uncharacterized protein LOC111441377 OS=Cucurbita moschata OX=3662 GN=LOC111441377 PE=4 SV=1)

HSP 1 Score: 268 bits (686), Expect = 1.06e-90
Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDESHFKKSVDEAFA+LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVVTPPEKLTQLYDSIFE+FDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 141
           GDQSFLKQAADLEASKLAQSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Cp4.1LG03g09050 vs. ExPASy TrEMBL
Match: A0A0A0L9X6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1)

HSP 1 Score: 259 bits (661), Expect = 6.85e-87
Identity = 133/141 (94.33%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVV+DGSTVRNFVNDESHF KS+D+AFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T PE+LTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 141
           GDQSFLKQAADLEASKL QSS
Sbjct: 121 GDQSFLKQAADLEASKLRQSS 141

[Close]

BLAST of Cp4.1LG03g09050 vs. ExPASy TrEMBL
Match: A0A5A7UE76 (Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00320 PE=4 SV=1)

HSP 1 Score: 256 bits (655), Expect = 5.63e-86
Identity = 132/141 (93.62%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDE HF KS+D+AFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T PE+LTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 141
           GD+SFLKQAADLEASKL QSS
Sbjct: 121 GDRSFLKQAADLEASKLGQSS 141

[Close]

BLAST of Cp4.1LG03g09050 vs. ExPASy TrEMBL
Match: A0A1S3CGR2 (uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=4 SV=1)

HSP 1 Score: 256 bits (655), Expect = 5.63e-86
Identity = 132/141 (93.62%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDE HF KS+D+AFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T PE+LTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 141
           GD+SFLKQAADLEASKL QSS
Sbjct: 121 GDRSFLKQAADLEASKLGQSS 141

[Close]

BLAST of Cp4.1LG03g09050 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 211.5 bits (537), Expect = 4.5e-55
Identity = 106/141 (75.18%), Postives = 125/141 (88.65%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           M VV+IDGSTVR+FV+DE  FKKSVDE FA+LDLN DGVLSRSELRKAFE++RL+E+HFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVVTP ++LT LYDSIFE+FD D+SG+VD EEFR+EMK I+LAIADGLGS PI M LDD
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 GDQSFLKQAADLEASKLAQSS 142
            D +FLK+AADLEASKL ++S
Sbjct: 121 DDDNFLKKAADLEASKLEKAS 141

[Close]

BLAST of Cp4.1LG03g09050 vs. TAIR 10
Match: AT5G28830.1 (calcium-binding EF hand family protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 35/119 (29.41%), Postives = 58/119 (48.74%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           + V ++DG+ ++ F+ DE  F    +  F  LD  + G L +SE+RKA         H G
Sbjct: 101 IVVSILDGTMLKMFLEDEDDFAMLAENLFTDLDEEDKGKLCKSEIRKAL-------VHMG 160

Query: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALD 120
           V++  PP     + D I ++ D D    +   +F   ++ +L  IAD L   PI + L+
Sbjct: 161 VEMGVPPLSEFPILDDIIKKHDADSDEELGQAQFAELLQQVLQEIADVLHEKPITIVLN 212

[Close]

BLAST of Cp4.1LG03g09050 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 62.8 bits (151), Expect = 2.6e-10
Identity = 40/122 (32.79%), Postives = 68/122 (55.74%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           M   VI   T+  F++D   F+   ++ F  LDL+ +G+LS SELR+    +  +E+   
Sbjct: 1   MIETVITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESE-- 60

Query: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMAL-D 120
              V P ++   +Y++IFE+F  D    +  + FR  +  IL A+A G+G+SP+ M + +
Sbjct: 61  ---VAPGDETDNVYNAIFERFGED----LVPKNFRDLIAEILTAMARGIGNSPVIMVVHN 113

Query: 121 DG 122
           DG
Sbjct: 121 DG 113

[Close]

BLAST of Cp4.1LG03g09050 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 55.5 bits (132), Expect = 4.1e-08
Identity = 36/118 (30.51%), Postives = 54/118 (45.76%), Query Frame = 0


Query: 5   VIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVV 64
           V+DGS +   V +E  F K V++ F  LD + DG LS +EL+ A      I    G+   
Sbjct: 14  VLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVAD---IGAALGLPAQ 73

Query: 65  TPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGD 123
                   +Y  +  +F       V   EF+  + +ILL +A GL   PI +   DG+
Sbjct: 74  GTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGE 128

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g09050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q86JE1	7.9e-04	35.00	Recoverin family protein DDB_G0272130 OS=Dictyostelium discoideum OX=44689 GN=DD...	[more]

BLAST of Cp4.1LG03g09050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526874.1	1.87e-91	100.00	uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo]	[more]
XP_022983603.1	5.35e-91	99.29	uncharacterized protein LOC111482160 [Cucurbita maxima] >XP_022983604.1 uncharac...	[more]
KAG7018108.1	2.11e-90	98.58	hypothetical protein SDJN02_19976, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022934103.1	2.18e-90	98.58	uncharacterized protein LOC111441377 [Cucurbita moschata] >KAG6581608.1 hypothet...	[more]
XP_038905172.1	6.00e-88	95.74	uncharacterized protein LOC120091281 [Benincasa hispida]	[more]

BLAST of Cp4.1LG03g09050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J7W5	2.59e-91	99.29	uncharacterized protein LOC111482160 OS=Cucurbita maxima OX=3661 GN=LOC111482160...	[more]
A0A6J1F6Q4	1.06e-90	98.58	uncharacterized protein LOC111441377 OS=Cucurbita moschata OX=3662 GN=LOC1114413...	[more]
A0A0A0L9X6	6.85e-87	94.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1	[more]
A0A5A7UE76	5.63e-86	93.62	Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CGR2	5.63e-86	93.62	uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=...	[more]

BLAST of Cp4.1LG03g09050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44310.1	4.5e-55	75.18	Calcium-binding EF-hand family protein	[more]
AT5G28830.1	1.5e-10	29.41	calcium-binding EF hand family protein	[more]
AT1G54530.1	2.6e-10	32.79	Calcium-binding EF hand family protein	[more]
AT4G38810.2	4.1e-08	30.51	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 73..101 e-value: 0.011 score: 24.9 coord: 24..52 e-value: 0.0027 score: 27.0
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 27..98 e-value: 5.2E-11 score: 42.8
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 69..104 score: 10.942794
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 20..55 score: 11.444912
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 25..99 e-value: 1.1385E-8 score: 46.7721
None	No IPR available	GENE3D	1.10.238.10		coord: 8..106 e-value: 8.6E-15 score: 57.2
None	No IPR available	PANTHER	PTHR34574:SF5	CALCIUM-BINDING EF-HAND FAMILY PROTEIN	coord: 1..139
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 1..139
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 82..94
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 33..45
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 23..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g09050.1	Cp4.1LG03g09050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding