Cp4.1LG03g09050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTATCTCACGACCGAGTCACCGACTTACCACCACTCACACACCAGTGGAGAGAAAAACATCAACACAGAGAAAGAGGAATGGCCGTGGTCGTAATCGACGGATCTACGGTGCGAAACTTCGTGAACGACGAATCTCATTTCAAGAAGAGCGTGGACGAAGCCTTCGCCTCTCTGGATCTGAACAACGATGGCGTTCTGTCTCGATCCGAACTCCGCAAGGCCTTCGAGACACTCCGCCTGATCGAGACTCACTTCGGCGTCGACGTCGTCACTCCGCCGGAGAAACTCACTCAACTCTACGATTCGATCTTCGAGCAGTTTGATTGCGACAAAAGCGGCACCGTCGATGCAGAAGAATTTCGGACGGAGATGAAGAACATTTTGCTCGCAATCGCCGATGGATTAGGCTCGTCTCCGATTCAGATGGCGCTCGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCAGATCTGGAGGCTTCAAAGCTCGCTCAATCGTCGGCCTGATCGCGATTTCTAGGTTTGCCGTTTCCGTTTCTTTTTTACTCCTTTTTCTTTAAATTTCTGTTATCTATATGAAGATGTTTGAATCTGATTCCACAATAAAATAGATCCTGATTCGCCGTTTATGAAGGAAAGAGCGATTCAGATTTAAACCTGTGGAGAGAAAAACGAGCAGATGAAGAACGAACAGGATCAATATCTAGGAACAATGTAAAATGGAGAGAATAAACGTTTGCTGGAGTTTTTTTTGTGGAGCAATTTATTCTGGAATTTATATCGGTGTTTGCTTGTTCGTTCGCGATTTTCCGCTTTTTCCGATTGAAATCGAGGCATGGGCTCACCCACTGGTCCATCGAAACAGGCTTCTCCAGGCCTCAGAAAATCGCAGACGCATCCATTTGATTTTTCTTAATTTAGGACCATTTTTTTTAGGCTAAATTATACCCAAAAAAAAAAAAAAAAAAAAAAAA TTTATCTCACGACCGAGTCACCGACTTACCACCACTCACACACCAGTGGAGAGAAAAACATCAACACAGAGAAAGAGGAATGGCCGTGGTCGTAATCGACGGATCTACGGTGCGAAACTTCGTGAACGACGAATCTCATTTCAAGAAGAGCGTGGACGAAGCCTTCGCCTCTCTGGATCTGAACAACGATGGCGTTCTGTCTCGATCCGAACTCCGCAAGGCCTTCGAGACACTCCGCCTGATCGAGACTCACTTCGGCGTCGACGTCGTCACTCCGCCGGAGAAACTCACTCAACTCTACGATTCGATCTTCGAGCAGTTTGATTGCGACAAAAGCGGCACCGTCGATGCAGAAGAATTTCGGACGGAGATGAAGAACATTTTGCTCGCAATCGCCGATGGATTAGGCTCGTCTCCGATTCAGATGGCGCTCGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCAGATCTGGAGGCTTCAAAGCTCGCTCAATCATCCTGATTCGCCGTTTATGAAGGAAAGAGCGATTCAGATTTAAACCTGTGGAGAGAAAAACGAGCAGATGAAGAACGAACAGGATCAATATCTAGGAACAATGTAAAATGGAGAGAATAAACGTTTGCTGGAGTTTTTTTTGTGGAGCAATTTATTCTGGAATTTATATCGGTGTTTGCTTGTTCGTTCGCGATTTTCCGCTTTTTCCGATTGAAATCGAGGCATGGGCTCACCCACTGGTCCATCGAAACAGGCTTCTCCAGGCCTCAGAAAATCGCAGACGCATCCATTTGATTTTTCTTAATTTAGGACCATTTTTTTTAGGCTAAATTATACCCAAAAAAAAAAAAAAAAAAAAAAAA ATGGCCGTGGTCGTAATCGACGGATCTACGGTGCGAAACTTCGTGAACGACGAATCTCATTTCAAGAAGAGCGTGGACGAAGCCTTCGCCTCTCTGGATCTGAACAACGATGGCGTTCTGTCTCGATCCGAACTCCGCAAGGCCTTCGAGACACTCCGCCTGATCGAGACTCACTTCGGCGTCGACGTCGTCACTCCGCCGGAGAAACTCACTCAACTCTACGATTCGATCTTCGAGCAGTTTGATTGCGACAAAAGCGGCACCGTCGATGCAGAAGAATTTCGGACGGAGATGAAGAACATTTTGCTCGCAATCGCCGATGGATTAGGCTCGTCTCCGATTCAGATGGCGCTCGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCAGATCTGGAGGCTTCAAAGCTCGCTCAATCATCCTGA MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS Homology
BLAST of Cp4.1LG03g09050 vs. ExPASy Swiss-Prot
Match: Q86JE1 (Recoverin family protein DDB_G0272130 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0272130 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 7.9e-04 Identity = 28/80 (35.00%), Postives = 39/80 (48.75%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. NCBI nr
Match: XP_023526874.1 (uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271 bits (693), Expect = 1.87e-91 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. NCBI nr
Match: XP_022983603.1 (uncharacterized protein LOC111482160 [Cucurbita maxima] >XP_022983604.1 uncharacterized protein LOC111482160 [Cucurbita maxima]) HSP 1 Score: 270 bits (690), Expect = 5.35e-91 Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. NCBI nr
Match: KAG7018108.1 (hypothetical protein SDJN02_19976, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 268 bits (686), Expect = 2.11e-90 Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. NCBI nr
Match: XP_022934103.1 (uncharacterized protein LOC111441377 [Cucurbita moschata] >KAG6581608.1 hypothetical protein SDJN03_21610, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 268 bits (686), Expect = 2.18e-90 Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. NCBI nr
Match: XP_038905172.1 (uncharacterized protein LOC120091281 [Benincasa hispida]) HSP 1 Score: 262 bits (670), Expect = 6.00e-88 Identity = 135/141 (95.74%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. ExPASy TrEMBL
Match: A0A6J1J7W5 (uncharacterized protein LOC111482160 OS=Cucurbita maxima OX=3661 GN=LOC111482160 PE=4 SV=1) HSP 1 Score: 270 bits (690), Expect = 2.59e-91 Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. ExPASy TrEMBL
Match: A0A6J1F6Q4 (uncharacterized protein LOC111441377 OS=Cucurbita moschata OX=3662 GN=LOC111441377 PE=4 SV=1) HSP 1 Score: 268 bits (686), Expect = 1.06e-90 Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. ExPASy TrEMBL
Match: A0A0A0L9X6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1) HSP 1 Score: 259 bits (661), Expect = 6.85e-87 Identity = 133/141 (94.33%), Postives = 137/141 (97.16%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. ExPASy TrEMBL
Match: A0A5A7UE76 (Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00320 PE=4 SV=1) HSP 1 Score: 256 bits (655), Expect = 5.63e-86 Identity = 132/141 (93.62%), Postives = 136/141 (96.45%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. ExPASy TrEMBL
Match: A0A1S3CGR2 (uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=4 SV=1) HSP 1 Score: 256 bits (655), Expect = 5.63e-86 Identity = 132/141 (93.62%), Postives = 136/141 (96.45%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 211.5 bits (537), Expect = 4.5e-55 Identity = 106/141 (75.18%), Postives = 125/141 (88.65%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. TAIR 10
Match: AT5G28830.1 (calcium-binding EF hand family protein ) HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10 Identity = 35/119 (29.41%), Postives = 58/119 (48.74%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein ) HSP 1 Score: 62.8 bits (151), Expect = 2.6e-10 Identity = 40/122 (32.79%), Postives = 68/122 (55.74%), Query Frame = 0
BLAST of Cp4.1LG03g09050 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein ) HSP 1 Score: 55.5 bits (132), Expect = 4.1e-08 Identity = 36/118 (30.51%), Postives = 54/118 (45.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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