Cp4.1LG03g07130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g07130
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Pentatricopeptide repeat-containing protein
Location	Cp4.1LG03: 3685462 .. 3687063 (-)
RNA-Seq Expression	Cp4.1LG03g07130
Synteny	Cp4.1LG03g07130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCACTGCTTGCGCTACAACAAATTCTTTCCAACTTCACTCCATAGCCCAATTTCCAATCTTCCTCTTCGTTTCATCTTCACCGTTGATTCTTCTGTTCAATCCTACACCGTCACGCCGCCGATCAAGCCCTGGCCGCAGCGTCTCTATCCCAAGCGCCTCGTCGCTATGATCATTCGCCAACAGAATCTCGACCTCGCCCTTCAAATCTTCCACTACGCCGGCAAATATCATCCCGGATTTTCCCATAATTACGATACTTATCATGCGATCATTCATCGTCTCTCTCGCGCTCGAGCTTTTGAGCCTGTCGAGTCTTTGCTTGGGGAATTGAAGAATTCTGGTATCAATTGCGGTGAGGATTTGTTCATTTCTGTGATTAGAAACTATGGGCTTGCGGGCCGGCCGAAAATGGCTGTGAAAATGTTTCTACGTATTCAAACCTTCGGTGTTCGACGCTCGGTGAGGTCGTTGAACACGTTGCTCAATGCTTTGGTGCAGAACAAACGGTTTTCTTTGGTACATTTGTTGTTTAAGCATTCGAGATCCAAATTTGGGGTCGTGCCTAATGTGTTTACTTGTAATATTTTGATCAAAGCGCTTTGCGAAAAGAATGATGTCGAGGGTGCACGGAAGGTGTCTGACGAAATGCCTGCTATGGGTATGGTTCCAAATGTGGTTACTTATACTACAATCTTAGGTGGTTATGTCGCAAGAGGCGATATGGTAAGTGCCAAGAGAGTTTTTGGTGAGCTTTTTGATCATGGTTGGCTTCCTGATGCGACTACTTATACAATTTTAATGAATGGGTACATTAAGCTAGGTAGATTCACTGAAGCTGTAAAGGTGATGGATGAAATGGAAGAAAATGGGGTTGAGCCAAATGATATTACTTATGGAGTCATTATTGAAGCTTATTGTAGGGAGAAGAAGTCTGGCGAAGCACTTAACCTGCTTAATGATATGCTTGAAAAGAAGTATGTACCAAGCTCAGCACTTTGCTGTAAGGTGATCGATGTTTTGTGCGGCGAGGGGAGGGTAAAGGAAGGTTGTAAGCTGTGGGGGAAGCTTTTGAGTAAGAACTGTACTCCGGATAATGCTATTACAAGTACCCTTATTCATTGGCTTTGTAAGGAGGGGAATATATGGGAAGCAAGAAACTTATTTAACGAGTTCGAGAGGGGATCGATTCCGAGTTTATTAACTTATAACACGCTTATTGCAGGGATGTGTGAGATGGGGGAGTTGTGTGAAGCCGCTAGGTTGTGGGATGACATGTTGGAAAAGGGTTGTATGCCTAATGAATTTACTTATAACATGCTGATAAAAGGATTTCTTAAAGTTGGTAAAGCTGAGGAAGTGATTAAAGTAGCGGAGGAGATGTTGGATAAGGGATGCTTGCCAAATGAGTCAACTTACTCAATTTTGGCTGAAGGGCTCCTCAAGTTGGGAAAAGAAGGAGAATTCTTGAATATTCTTTTGATGTTCATCTCGAGCGGAGTTGTAGACGATAAAGCCTGGCATCTATTTGTACCCAAGTTTGTTTGCAATATGGACGAACAAGCAAATATGCTCGAGAAAATATTGATTGAAACTTGA

mRNA sequence

ATGTGGCACTGCTTGCGCTACAACAAATTCTTTCCAACTTCACTCCATAGCCCAATTTCCAATCTTCCTCTTCGTTTCATCTTCACCGTTGATTCTTCTGTTCAATCCTACACCGTCACGCCGCCGATCAAGCCCTGGCCGCAGCGTCTCTATCCCAAGCGCCTCGTCGCTATGATCATTCGCCAACAGAATCTCGACCTCGCCCTTCAAATCTTCCACTACGCCGGCAAATATCATCCCGGATTTTCCCATAATTACGATACTTATCATGCGATCATTCATCGTCTCTCTCGCGCTCGAGCTTTTGAGCCTGTCGAGTCTTTGCTTGGGGAATTGAAGAATTCTGGTATCAATTGCGGTGAGGATTTGTTCATTTCTGTGATTAGAAACTATGGGCTTGCGGGCCGGCCGAAAATGGCTGTGAAAATGTTTCTACGTATTCAAACCTTCGGTGTTCGACGCTCGGTGAGGTCGTTGAACACGTTGCTCAATGCTTTGGTGCAGAACAAACGGTTTTCTTTGGTACATTTGTTGTTTAAGCATTCGAGATCCAAATTTGGGGTCGTGCCTAATGTGTTTACTTGTAATATTTTGATCAAAGCGCTTTGCGAAAAGAATGATGTCGAGGGTGCACGGAAGGTGTCTGACGAAATGCCTGCTATGGGTATGGTTCCAAATGTGGTTACTTATACTACAATCTTAGGTGGTTATGTCGCAAGAGGCGATATGGTAAGTGCCAAGAGAGTTTTTGGTGAGCTTTTTGATCATGGTTGGCTTCCTGATGCGACTACTTATACAATTTTAATGAATGGGTACATTAAGCTAGGTAGATTCACTGAAGCTGTAAAGGTGATGGATGAAATGGAAGAAAATGGGGTTGAGCCAAATGATATTACTTATGGAGTCATTATTGAAGCTTATTGTAGGGAGAAGAAGTCTGGCGAAGCACTTAACCTGCTTAATGATATGCTTGAAAAGAAGTATGTACCAAGCTCAGCACTTTGCTGTAAGGTGATCGATGTTTTGTGCGGCGAGGGGAGGGTAAAGGAAGGTTGTAAGCTGTGGGGGAAGCTTTTGAGTAAGAACTGTACTCCGGATAATGCTATTACAAGTACCCTTATTCATTGGCTTTGTAAGGAGGGGAATATATGGGAAGCAAGAAACTTATTTAACGAGTTCGAGAGGGGATCGATTCCGAGTTTATTAACTTATAACACGCTTATTGCAGGGATGTGTGAGATGGGGGAGTTGTGTGAAGCCGCTAGGTTGTGGGATGACATGTTGGAAAAGGGTTGTATGCCTAATGAATTTACTTATAACATGCTGATAAAAGGATTTCTTAAAGTTGGTAAAGCTGAGGAAGTGATTAAAGTAGCGGAGGAGATGTTGGATAAGGGATGCTTGCCAAATGAGTCAACTTACTCAATTTTGGCTGAAGGGCTCCTCAAGTTGGGAAAAGAAGGAGAATTCTTGAATATTCTTTTGATGTTCATCTCGAGCGGAGTTGTAGACGATAAAGCCTGGCATCTATTTGTACCCAAGTTTGTTTGCAATATGGACGAACAAGCAAATATGCTCGAGAAAATATTGATTGAAACTTGA

Coding sequence (CDS)

ATGTGGCACTGCTTGCGCTACAACAAATTCTTTCCAACTTCACTCCATAGCCCAATTTCCAATCTTCCTCTTCGTTTCATCTTCACCGTTGATTCTTCTGTTCAATCCTACACCGTCACGCCGCCGATCAAGCCCTGGCCGCAGCGTCTCTATCCCAAGCGCCTCGTCGCTATGATCATTCGCCAACAGAATCTCGACCTCGCCCTTCAAATCTTCCACTACGCCGGCAAATATCATCCCGGATTTTCCCATAATTACGATACTTATCATGCGATCATTCATCGTCTCTCTCGCGCTCGAGCTTTTGAGCCTGTCGAGTCTTTGCTTGGGGAATTGAAGAATTCTGGTATCAATTGCGGTGAGGATTTGTTCATTTCTGTGATTAGAAACTATGGGCTTGCGGGCCGGCCGAAAATGGCTGTGAAAATGTTTCTACGTATTCAAACCTTCGGTGTTCGACGCTCGGTGAGGTCGTTGAACACGTTGCTCAATGCTTTGGTGCAGAACAAACGGTTTTCTTTGGTACATTTGTTGTTTAAGCATTCGAGATCCAAATTTGGGGTCGTGCCTAATGTGTTTACTTGTAATATTTTGATCAAAGCGCTTTGCGAAAAGAATGATGTCGAGGGTGCACGGAAGGTGTCTGACGAAATGCCTGCTATGGGTATGGTTCCAAATGTGGTTACTTATACTACAATCTTAGGTGGTTATGTCGCAAGAGGCGATATGGTAAGTGCCAAGAGAGTTTTTGGTGAGCTTTTTGATCATGGTTGGCTTCCTGATGCGACTACTTATACAATTTTAATGAATGGGTACATTAAGCTAGGTAGATTCACTGAAGCTGTAAAGGTGATGGATGAAATGGAAGAAAATGGGGTTGAGCCAAATGATATTACTTATGGAGTCATTATTGAAGCTTATTGTAGGGAGAAGAAGTCTGGCGAAGCACTTAACCTGCTTAATGATATGCTTGAAAAGAAGTATGTACCAAGCTCAGCACTTTGCTGTAAGGTGATCGATGTTTTGTGCGGCGAGGGGAGGGTAAAGGAAGGTTGTAAGCTGTGGGGGAAGCTTTTGAGTAAGAACTGTACTCCGGATAATGCTATTACAAGTACCCTTATTCATTGGCTTTGTAAGGAGGGGAATATATGGGAAGCAAGAAACTTATTTAACGAGTTCGAGAGGGGATCGATTCCGAGTTTATTAACTTATAACACGCTTATTGCAGGGATGTGTGAGATGGGGGAGTTGTGTGAAGCCGCTAGGTTGTGGGATGACATGTTGGAAAAGGGTTGTATGCCTAATGAATTTACTTATAACATGCTGATAAAAGGATTTCTTAAAGTTGGTAAAGCTGAGGAAGTGATTAAAGTAGCGGAGGAGATGTTGGATAAGGGATGCTTGCCAAATGAGTCAACTTACTCAATTTTGGCTGAAGGGCTCCTCAAGTTGGGAAAAGAAGGAGAATTCTTGAATATTCTTTTGATGTTCATCTCGAGCGGAGTTGTAGACGATAAAGCCTGGCATCTATTTGTACCCAAGTTTGTTTGCAATATGGACGAACAAGCAAATATGCTCGAGAAAATATTGATTGAAACTTGA

Protein sequence

MWHCLRYNKFFPTSLHSPISNLPLRFIFTVDSSVQSYTVTPPIKPWPQRLYPKRLVAMIIRQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCGEDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFKHSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVARGDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITYGVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLSKNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEGLLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET

Homology

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BLAST of Cp4.1LG03g07130 vs. ExPASy Swiss-Prot
Match: Q9FFE3 (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g16420 PE=2 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 1.9e-199
Identity = 324/504 (64.29%), Postives = 410/504 (81.35%), Query Frame = 0


Query: 32  SSVQSY-TVTPPIKPWPQRLYPKRLVAMIIRQQNLDLALQIFHYAGKYHPGFSHNYDTYH 91
           +S+Q Y T  PPIKPWPQRL+PKRLV+MI +QQN+DLALQIF YAGK HPGF+HNYDTYH
Sbjct: 28  ASLQQYCTEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYH 87

Query: 92  AIIHRLSRARAFEPVESLLGELKNS--GINCGEDLFISVIRNYGLAGRPKMAVKMFLRIQ 151
           +I+ +LSRARAF+PVESL+ +L+NS   I CGE+LFI ++RNYGLAGR + ++++FLRI 
Sbjct: 88  SILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIP 147

Query: 152 TFGVRRSVRSLNTLLNALVQNKRFSLVHLLFKHSRSKFGVVPNVFTCNILIKALCEKNDV 211
            FGV+RSVRSLNTLLN L+QN+RF LVH +FK+S+  FG+ PN+FTCN+L+KALC+KND+
Sbjct: 148 DFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 207

Query: 212 EGARKVSDEMPAMGMVPNVVTYTTILGGYVARGDMVSAKRVFGELFDHGWLPDATTYTIL 271
           E A KV DE+P+MG+VPN+VTYTTILGGYVARGDM SAKRV  E+ D GW PDATTYT+L
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267

Query: 272 MNGYIKLGRFTEAVKVMDEMEENGVEPNDITYGVIIEAYCREKKSGEALNLLNDMLEKKY 331
           M+GY KLGRF+EA  VMD+ME+N +EPN++TYGV+I A C+EKKSGEA N+ ++MLE+ +
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327

Query: 332 VPSSALCCKVIDVLCGEGRVKEGCKLWGKLLSKNCTPDNAITSTLIHWLCKEGNIWEARN 391
           +P S+LCCKVID LC + +V E C LW K+L  NC PDNA+ STLIHWLCKEG + EAR 
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARK 387

Query: 392 LFNEFERGSIPSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCMPNEFTYNMLIKGFLK 451
           LF+EFE+GSIPSLLTYNTLIAGMCE GEL EA RLWDDM E+ C PN FTYN+LI+G  K
Sbjct: 388 LFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSK 447

Query: 452 VGKAEEVIKVAEEMLDKGCLPNESTYSILAEGLLKLGKEGEFLNILLMFISSGVVDDKAW 511
            G  +E ++V EEML+ GC PN++T+ IL EGL KLGKE + + I+ M + +G VD ++W
Sbjct: 448 NGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESW 507

Query: 512 HLFVPKFVCNMDEQANMLEKILIE 533
            LF+ KF   +D+    L+++L E
Sbjct: 508 ELFLKKFAGELDKGVLPLKELLHE 531

[Close]

BLAST of Cp4.1LG03g07130 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.7e-62
Identity = 140/486 (28.81%), Postives = 257/486 (52.88%), Query Frame = 0


Query: 54  RLVAMIIRQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELK 113
           +L+  +  Q +   AL++F+ A K  P FS     Y  I+ RL R+ +F+ ++ +L ++K
Sbjct: 52  KLLDSLRSQPDDSAALRLFNLASK-KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK 111

Query: 114 NSGINCGEDLFISVIRNYG-LAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRF 173
           +S    G   F+ +I +Y     + ++   +   I  FG++      N +LN LV     
Sbjct: 112 SSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL 171

Query: 174 SLVHLLFKHSR-SKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYT 233
            LV +   H++ S +G+ P+V T N+LIKALC  + +  A  + ++MP+ G+VP+  T+T
Sbjct: 172 KLVEI--SHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 231

Query: 234 TILGGYVARGDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEM-EE 293
           T++ GY+  GD+  A R+  ++ + G      +  ++++G+ K GR  +A+  + EM  +
Sbjct: 232 TVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 291

Query: 294 NGVEPNDITYGVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKE 353
           +G  P+  T+  ++   C+      A+ +++ ML++ Y P       VI  LC  G VKE
Sbjct: 292 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 351

Query: 354 GCKLWGKLLSKNCTPDNAITSTLIHWLCKEGNIWEARNLFNEF-ERGSIPSLLTYNTLIA 413
             ++  ++++++C+P+    +TLI  LCKE  + EA  L      +G +P + T+N+LI 
Sbjct: 352 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 411

Query: 414 GMCEMGELCEAARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLP 473
           G+C       A  L+++M  KGC P+EFTYNMLI      GK +E + + ++M   GC  
Sbjct: 412 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 471

Query: 474 NESTYSILAEGLLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVC---NMDEQANML 533
           +  TY+ L +G  K  K  E   I       GV  +   +  +   +C    +++ A ++
Sbjct: 472 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 531

[Close]

BLAST of Cp4.1LG03g07130 vs. ExPASy Swiss-Prot
Match: Q9SS81 (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX=3702 GN=At3g09060 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-60
Identity = 150/490 (30.61%), Postives = 250/490 (51.02%), Query Frame = 0


Query: 46  WPQRLYPKRLVAMIIRQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPV 105
           +P+ L PK ++ ++  ++N   A  +F  A + HPG++H+   YH I+ RLS  R    V
Sbjct: 4   FPKSLSPKHVLKLLKSEKNPRAAFALFDSATR-HPGYAHSAVVYHHILRRLSETRMVNHV 63

Query: 106 ESLLGELKNSGINCGEDLFISVIRNYGLAGRPKMAVKMFLRI-QTFGVRRSVRSLNTLLN 165
             ++  +++    C ED+ +SVI+ YG    P  A+ +F R+ + FG   ++RS NTLLN
Sbjct: 64  SRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLN 123

Query: 166 ALVQNKRFSLVHLLFKHSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMV 225
           A V+ K++  V  LF +  +  GV PN+ T N+LIK  C+K + E AR   D M   G  
Sbjct: 124 AFVEAKQWVKVESLFAYFETA-GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK 183

Query: 226 PNVVTYTTILGGYVARGDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKV 285
           P+V +Y+T++      G +  A  +F E+ + G  PD T Y IL++G++K      A+++
Sbjct: 184 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 243

Query: 286 MDE-MEENGVEPNDITYGVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLC 345
            D  +E++ V PN  T+ ++I    +                                 C
Sbjct: 244 WDRLLEDSSVYPNVKTHNIMISGLSK---------------------------------C 303

Query: 346 GEGRVKEGCKLWGKLLSKNCTPDNAITSTLIHWLCKEGNIWEARNLFNEF-ERGSIPSLL 405
             GRV +  K+W ++       D    S+LIH LC  GN+ +A ++FNE  ER +   ++
Sbjct: 304 --GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 363

Query: 406 TYNTLIAGMCEMGELCEAARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEM 465
           TYNT++ G C  G++ E+  LW  M  K  + N  +YN+LIKG L+ GK +E   +   M
Sbjct: 364 TYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLM 423

Query: 466 LDKGCLPNESTYSILAEGLLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVC---NM 525
             KG   +++TY I   GL   G   + L ++    SSG   D   +  +   +C    +
Sbjct: 424 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL 455

Query: 526 DEQANMLEKI 530
           +E +N+++++
Sbjct: 484 EEASNLVKEM 455

[Close]

BLAST of Cp4.1LG03g07130 vs. ExPASy Swiss-Prot
Match: Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.9e-58
Identity = 134/458 (29.26%), Postives = 233/458 (50.87%), Query Frame = 0


Query: 50  LYPKRLVAMIIRQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLL 109
           L PK + A+I  Q++   AL++F+   K   GF H   TY ++I +L     FE +E +L
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRK-EVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 64

Query: 110 GELK-NSGINCGEDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQ 169
            +++ N G +  E +++  ++NYG  G+ + AV +F R+  +    +V S N +++ LV 
Sbjct: 65  VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 124

Query: 170 NKRFSLVHLLFKHSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVV 229
           +  F   H ++   R + G+ P+V++  I +K+ C+ +    A ++ + M + G   NVV
Sbjct: 125 SGYFDQAHKVYMRMRDR-GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 184

Query: 230 TYTTILGGYVARGDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEM 289
            Y T++GG+           +FG++   G     +T+  L+    K G   E  K++D++
Sbjct: 185 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 244

Query: 290 EENGVEPNDITYGVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRV 349
            + GV PN  TY + I+  C+  +   A+ ++  ++E+   P       +I  LC   + 
Sbjct: 245 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 304

Query: 350 KEGCKLWGKLLSKNCTPDNAITSTLIHWLCKEGNIWEARNLFNE-FERGSIPSLLTYNTL 409
           +E     GK++++   PD+   +TLI   CK G +  A  +  +    G +P   TY +L
Sbjct: 305 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 364

Query: 410 IAGMCEMGELCEAARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGC 469
           I G+C  GE   A  L+++ L KG  PN   YN LIKG    G   E  ++A EM +KG 
Sbjct: 365 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 424

Query: 470 LPNESTYSILAEGLLKLGKEGEFLNILLMFISSGVVDD 506
           +P   T++IL  GL K+G   +   ++ + IS G   D
Sbjct: 425 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460

[Close]

BLAST of Cp4.1LG03g07130 vs. ExPASy Swiss-Prot
Match: Q9M302 (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX=3702 GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.2e-58
Identity = 135/430 (31.40%), Postives = 221/430 (51.40%), Query Frame = 0


Query: 60  IRQQN-LDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGIN 119
           +RQ++ + LAL  F      +  F H   T+  +I +L+     + V+ LL ++K  G +
Sbjct: 50  LRQESCVPLALHFFKSIANSNL-FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFH 109

Query: 120 CGEDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLL 179
           C EDLFISVI  Y   G  + AV+MF RI+ FG   SV+  N +L+ L+   R  +++++
Sbjct: 110 CSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMV 169

Query: 180 FKHSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYV 239
           ++  + + G  PNVFT N+L+KALC+ N V+GA+K+  EM   G  P+ V+YTT++    
Sbjct: 170 YRDMK-RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 229

Query: 240 ARGDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDI 299
             G +V   R   E F+    P  + Y  L+NG  K   +  A ++M EM E G+ PN I
Sbjct: 230 EVG-LVKEGRELAERFE----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 289

Query: 300 TYGVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKL 359
           +Y  +I   C   +   A + L  ML++   P+      ++      G   +   LW ++
Sbjct: 290 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 349

Query: 360 L-SKNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFER-GSIPSLLTYNTLIAGMCEMGE 419
           +      P+    +TL+   C  GNI +A ++F+  E  G  P++ TY +LI G  + G 
Sbjct: 350 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 409

Query: 420 LCEAARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSI 479
           L  A  +W+ ML  GC PN   Y  +++   +  K +E   + E M  + C P+  T++ 
Sbjct: 410 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 469

Query: 480 LAEGLLKLGK 487
             +GL   G+
Sbjct: 470 FIKGLCDAGR 472

[Close]

BLAST of Cp4.1LG03g07130 vs. NCBI nr
Match: XP_023528110.1 (pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023528111.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023528112.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023528113.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023528114.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023528115.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023528116.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023528117.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023528118.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1089 bits (2817), Expect = 0.0
Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 0


Query: 1   MWHCLRYNKFFPTSLHSPISNLPLRFIFTVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII 60
           MWHCLRYNKFFPTSLHSPISNLPLRFIFTVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII
Sbjct: 1   MWHCLRYNKFFPTSLHSPISNLPLRFIFTVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII 60

Query: 61  RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120
           RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG
Sbjct: 61  RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120

Query: 121 EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180
           EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK
Sbjct: 121 EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180

Query: 181 HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR 240
           HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR
Sbjct: 181 HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR 240

Query: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300
           GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY
Sbjct: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300

Query: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLS 360
           GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLS
Sbjct: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLS 360

Query: 361 KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420
           KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA
Sbjct: 361 KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420

Query: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG 480
           ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG
Sbjct: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG 480

Query: 481 LLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533
           LLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET
Sbjct: 481 LLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533

[Close]

BLAST of Cp4.1LG03g07130 vs. NCBI nr
Match: XP_022934977.1 (pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita moschata] >XP_022934978.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita moschata] >XP_022934979.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita moschata] >XP_022934980.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita moschata] >XP_022934981.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita moschata] >XP_022934982.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita moschata] >XP_022934983.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita moschata] >XP_022934984.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita moschata] >XP_022934985.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1073 bits (2774), Expect = 0.0
Identity = 523/533 (98.12%), Postives = 528/533 (99.06%), Query Frame = 0


Query: 1   MWHCLRYNKFFPTSLHSPISNLPLRFIFTVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII 60
           MWHCLRYNKFFPTS H PI+NLPLRFIF VDSSVQSYTVTPPIKPWPQRLYPKRLVAMII
Sbjct: 1   MWHCLRYNKFFPTSFHGPITNLPLRFIFAVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII 60

Query: 61  RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120
           RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG
Sbjct: 61  RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120

Query: 121 EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180
           EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK
Sbjct: 121 EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180

Query: 181 HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR 240
           HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR
Sbjct: 181 HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR 240

Query: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300
           GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY
Sbjct: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300

Query: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLS 360
           GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLL+
Sbjct: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLN 360

Query: 361 KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420
           KNCTPDNAITSTLIHWLCKEGNIWEAR+LFNEFERGSIPSLLTYNTLIAGMCEMGELCEA
Sbjct: 361 KNCTPDNAITSTLIHWLCKEGNIWEARDLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420

Query: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG 480
           ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVI+VAEEMLDKGCLPNESTYSILAE 
Sbjct: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIEVAEEMLDKGCLPNESTYSILAEE 480

Query: 481 LLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533
           LLKLGKEGEFLNIL MF+SSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET
Sbjct: 481 LLKLGKEGEFLNILSMFVSSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533

[Close]

BLAST of Cp4.1LG03g07130 vs. NCBI nr
Match: KAG7017816.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1065 bits (2754), Expect = 0.0
Identity = 519/533 (97.37%), Postives = 526/533 (98.69%), Query Frame = 0


Query: 1   MWHCLRYNKFFPTSLHSPISNLPLRFIFTVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII 60
           MWHC R NKFFPTSLH  ISNLPLRFIF VDSSVQSYTVTPPIKPWPQRLYPKRLVAMII
Sbjct: 1   MWHCFRCNKFFPTSLHGSISNLPLRFIFAVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII 60

Query: 61  RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120
           RQQNLDLALQIFHYAGKYHPG+SHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG
Sbjct: 61  RQQNLDLALQIFHYAGKYHPGYSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120

Query: 121 EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180
           EDLFISVIRNYGLAGRPKMAVKMF+RIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK
Sbjct: 121 EDLFISVIRNYGLAGRPKMAVKMFIRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180

Query: 181 HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR 240
           HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR
Sbjct: 181 HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR 240

Query: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300
           GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY
Sbjct: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300

Query: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLS 360
           GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLL+
Sbjct: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLN 360

Query: 361 KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420
           KNCTPDNAITSTLIHWLCKEGNIWEAR+LFNEFERGSIPSLLTYNTLIAGMCEMGELCEA
Sbjct: 361 KNCTPDNAITSTLIHWLCKEGNIWEARDLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420

Query: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG 480
           ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVI+VAEEMLDKGCLPNESTYSILAE 
Sbjct: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIEVAEEMLDKGCLPNESTYSILAEE 480

Query: 481 LLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533
           LLKLGKEGEFLN+L MF+SSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET
Sbjct: 481 LLKLGKEGEFLNVLSMFVSSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533

[Close]

BLAST of Cp4.1LG03g07130 vs. NCBI nr
Match: KAG6581089.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1062 bits (2746), Expect = 0.0
Identity = 518/533 (97.19%), Postives = 525/533 (98.50%), Query Frame = 0


Query: 1   MWHCLRYNKFFPTSLHSPISNLPLRFIFTVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII 60
           MWHC R NKFFPTSLH  ISNLPLRFIF VDSSVQSYTVTPPIKPWPQRLYPKRLVAMII
Sbjct: 1   MWHCFRCNKFFPTSLHGSISNLPLRFIFAVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII 60

Query: 61  RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120
           RQQNLDLALQIFHYAGKYHPG+SHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG
Sbjct: 61  RQQNLDLALQIFHYAGKYHPGYSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120

Query: 121 EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180
           EDLFISVIRNYGLAGRPKMAVKMF+RIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK
Sbjct: 121 EDLFISVIRNYGLAGRPKMAVKMFIRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180

Query: 181 HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR 240
           HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR
Sbjct: 181 HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR 240

Query: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300
           GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY
Sbjct: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300

Query: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLS 360
           GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLL+
Sbjct: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLN 360

Query: 361 KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420
           KNCTPDNAITSTLIHWLCKEGNIWEAR+LFNEFERGSIPSLLTYNTLIAGMCEMGELCEA
Sbjct: 361 KNCTPDNAITSTLIHWLCKEGNIWEARDLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420

Query: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG 480
           ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVI+VAEEMLDKGCLPNESTYSILAE 
Sbjct: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIEVAEEMLDKGCLPNESTYSILAEE 480

Query: 481 LLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533
           LLKLGKEGEFLN+L MF+SSGVVDDKAWHLFV KFVCNMDEQANMLEKILIET
Sbjct: 481 LLKLGKEGEFLNVLSMFVSSGVVDDKAWHLFVSKFVCNMDEQANMLEKILIET 533

[Close]

BLAST of Cp4.1LG03g07130 vs. NCBI nr
Match: XP_022982687.1 (pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita maxima] >XP_022982688.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita maxima] >XP_022982689.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita maxima] >XP_022982690.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita maxima] >XP_022982691.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita maxima] >XP_022982693.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita maxima] >XP_022982694.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita maxima] >XP_022982695.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita maxima] >XP_022982696.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita maxima] >XP_022982697.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita maxima] >XP_022982698.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita maxima] >XP_022982699.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1052 bits (2720), Expect = 0.0
Identity = 515/533 (96.62%), Postives = 521/533 (97.75%), Query Frame = 0


Query: 1   MWHCLRYNKFFPTSLHSPISNLPLRFIFTVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII 60
           MWHC RYNKFFPTSLHSPISNL LRFIF+VDSSVQSYTVTPPIKPWPQRLYPKRLVAM+I
Sbjct: 1   MWHCFRYNKFFPTSLHSPISNLSLRFIFSVDSSVQSYTVTPPIKPWPQRLYPKRLVAMVI 60

Query: 61  RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120
           RQQNLDLALQIFHYAGK+HPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG
Sbjct: 61  RQQNLDLALQIFHYAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120

Query: 121 EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180
           EDLFISVIRNYGLA RPKMAVK FLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK
Sbjct: 121 EDLFISVIRNYGLASRPKMAVKTFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180

Query: 181 HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR 240
           HSRSKFGVV NVFTCNILIKALCEKNDVEGARKV DEMPAMGMVPNVVTYTTILGGYVAR
Sbjct: 181 HSRSKFGVVSNVFTCNILIKALCEKNDVEGARKVFDEMPAMGMVPNVVTYTTILGGYVAR 240

Query: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300
           GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY
Sbjct: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300

Query: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLS 360
           GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLC EGRVKEGCKLW KLL+
Sbjct: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCDEGRVKEGCKLWEKLLN 360

Query: 361 KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420
           KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA
Sbjct: 361 KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420

Query: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG 480
           ARLWDDMLEKGCMP+EFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG
Sbjct: 421 ARLWDDMLEKGCMPSEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG 480

Query: 481 LLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533
           LLKLGK GEFLNIL MF+SSGVVD K WHLFVPKFVCNMDEQANMLEKILIET
Sbjct: 481 LLKLGKGGEFLNILSMFVSSGVVDVKGWHLFVPKFVCNMDEQANMLEKILIET 533

[Close]

BLAST of Cp4.1LG03g07130 vs. ExPASy TrEMBL
Match: A0A6J1F4B0 (pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111441981 PE=4 SV=1)

HSP 1 Score: 1073 bits (2774), Expect = 0.0
Identity = 523/533 (98.12%), Postives = 528/533 (99.06%), Query Frame = 0


Query: 1   MWHCLRYNKFFPTSLHSPISNLPLRFIFTVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII 60
           MWHCLRYNKFFPTS H PI+NLPLRFIF VDSSVQSYTVTPPIKPWPQRLYPKRLVAMII
Sbjct: 1   MWHCLRYNKFFPTSFHGPITNLPLRFIFAVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII 60

Query: 61  RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120
           RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG
Sbjct: 61  RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120

Query: 121 EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180
           EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK
Sbjct: 121 EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180

Query: 181 HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR 240
           HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR
Sbjct: 181 HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR 240

Query: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300
           GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY
Sbjct: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300

Query: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLS 360
           GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLL+
Sbjct: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLN 360

Query: 361 KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420
           KNCTPDNAITSTLIHWLCKEGNIWEAR+LFNEFERGSIPSLLTYNTLIAGMCEMGELCEA
Sbjct: 361 KNCTPDNAITSTLIHWLCKEGNIWEARDLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420

Query: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG 480
           ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVI+VAEEMLDKGCLPNESTYSILAE 
Sbjct: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIEVAEEMLDKGCLPNESTYSILAEE 480

Query: 481 LLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533
           LLKLGKEGEFLNIL MF+SSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET
Sbjct: 481 LLKLGKEGEFLNILSMFVSSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533

[Close]

BLAST of Cp4.1LG03g07130 vs. ExPASy TrEMBL
Match: A0A6J1J5I0 (pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111481484 PE=4 SV=1)

HSP 1 Score: 1052 bits (2720), Expect = 0.0
Identity = 515/533 (96.62%), Postives = 521/533 (97.75%), Query Frame = 0


Query: 1   MWHCLRYNKFFPTSLHSPISNLPLRFIFTVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII 60
           MWHC RYNKFFPTSLHSPISNL LRFIF+VDSSVQSYTVTPPIKPWPQRLYPKRLVAM+I
Sbjct: 1   MWHCFRYNKFFPTSLHSPISNLSLRFIFSVDSSVQSYTVTPPIKPWPQRLYPKRLVAMVI 60

Query: 61  RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120
           RQQNLDLALQIFHYAGK+HPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG
Sbjct: 61  RQQNLDLALQIFHYAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120

Query: 121 EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180
           EDLFISVIRNYGLA RPKMAVK FLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK
Sbjct: 121 EDLFISVIRNYGLASRPKMAVKTFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180

Query: 181 HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR 240
           HSRSKFGVV NVFTCNILIKALCEKNDVEGARKV DEMPAMGMVPNVVTYTTILGGYVAR
Sbjct: 181 HSRSKFGVVSNVFTCNILIKALCEKNDVEGARKVFDEMPAMGMVPNVVTYTTILGGYVAR 240

Query: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300
           GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY
Sbjct: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300

Query: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLS 360
           GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLC EGRVKEGCKLW KLL+
Sbjct: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCDEGRVKEGCKLWEKLLN 360

Query: 361 KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420
           KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA
Sbjct: 361 KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420

Query: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG 480
           ARLWDDMLEKGCMP+EFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG
Sbjct: 421 ARLWDDMLEKGCMPSEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG 480

Query: 481 LLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533
           LLKLGK GEFLNIL MF+SSGVVD K WHLFVPKFVCNMDEQANMLEKILIET
Sbjct: 481 LLKLGKGGEFLNILSMFVSSGVVDVKGWHLFVPKFVCNMDEQANMLEKILIET 533

[Close]

BLAST of Cp4.1LG03g07130 vs. ExPASy TrEMBL
Match: A0A6J1DN12 (pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111021517 PE=4 SV=1)

HSP 1 Score: 972 bits (2512), Expect = 0.0
Identity = 473/533 (88.74%), Postives = 501/533 (94.00%), Query Frame = 0


Query: 1   MWHCLRYNKFFPTSLHSPISNLPLRFIFTVDSSVQSYTVTPPIKPWPQRLYPKRLVAMII 60
           MW  +  NK    SLHS I+ +PLRFIF VDSS+QSYTVTPPIKPWPQRLYP+RLV+MII
Sbjct: 1   MWCYISRNKIKSISLHSSIAIVPLRFIFAVDSSLQSYTVTPPIKPWPQRLYPRRLVSMII 60

Query: 61  RQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCG 120
            QQNLDLALQIFH+AGK+HPGFSHNYDTYHAI+HRLSRARAFEPVESLL +L++SGI CG
Sbjct: 61  GQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIVHRLSRARAFEPVESLLLDLQSSGIKCG 120

Query: 121 EDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFK 180
           EDLFI+VIR+YGLAGRPK+AVK FLRIQTFGVRRSVRSLNTLLNALVQN RFSLVHLLFK
Sbjct: 121 EDLFITVIRSYGLAGRPKLAVKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSLVHLLFK 180

Query: 181 HSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVAR 240
           HS SKFGVVPNVFTCNILIKALC+KND+EGARKV DEMPAMGMVPNVVTYTTILGGYV+R
Sbjct: 181 HSNSKFGVVPNVFTCNILIKALCKKNDIEGARKVFDEMPAMGMVPNVVTYTTILGGYVSR 240

Query: 241 GDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITY 300
           GDMV AKRVFGELFDHGWLPDATTYTILM+GYIK GRFT+AVKVMDEMEENG++PNDITY
Sbjct: 241 GDMVGAKRVFGELFDHGWLPDATTYTILMDGYIKQGRFTDAVKVMDEMEENGIDPNDITY 300

Query: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLS 360
           GVIIEAYCREKKSGEALNLLNDMLEKKY+P+SALCCKVIDVLC EGRVKE CKLW +LL 
Sbjct: 301 GVIIEAYCREKKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCCEGRVKEACKLWERLLK 360

Query: 361 KNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420
           KNCTPDNAITSTLIHWLCKEGNIWEAR LFNEFERGSIPSLLTYNTLIAGMCEMGELCEA
Sbjct: 361 KNCTPDNAITSTLIHWLCKEGNIWEARTLFNEFERGSIPSLLTYNTLIAGMCEMGELCEA 420

Query: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEG 480
           ARLWDDMLEKGCMPNEFTYNMLIKGFL+VGKAEEVIKV EEMLDKGCLPNESTYSILAEG
Sbjct: 421 ARLWDDMLEKGCMPNEFTYNMLIKGFLEVGKAEEVIKVVEEMLDKGCLPNESTYSILAEG 480

Query: 481 LLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533
           LLKLGK GEF NIL MFISSGVVD K WHLFVPKFVCNMDEQ+N+L KILIET
Sbjct: 481 LLKLGKGGEFSNILSMFISSGVVDFKVWHLFVPKFVCNMDEQSNILNKILIET 533

[Close]

BLAST of Cp4.1LG03g07130 vs. ExPASy TrEMBL
Match: A0A1S3BPE8 (pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491773 PE=4 SV=1)

HSP 1 Score: 929 bits (2402), Expect = 0.0
Identity = 452/528 (85.61%), Postives = 487/528 (92.23%), Query Frame = 0


Query: 6   RYNKFFPTSLHSPISNLPLRFIFTVDSSVQSYTVTPPIKPWPQRLYPKRLVAMIIRQQNL 65
           R N+F   SLH+PIS +PLRFIF +++ +QSYTVTPPIKPWPQRL+PKRLVAMI RQQNL
Sbjct: 6   RSNRFKHISLHTPISIVPLRFIFAIETPLQSYTVTPPIKPWPQRLFPKRLVAMIRRQQNL 65

Query: 66  DLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCGEDLFI 125
           DLALQIFHYAGK+HP FSHNYDTYHAIIHRLSRARAFEPVESLL EL+++GINC EDLFI
Sbjct: 66  DLALQIFHYAGKFHPAFSHNYDTYHAIIHRLSRARAFEPVESLLLELQDAGINCSEDLFI 125

Query: 126 SVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFKHSRSK 185
           +VIR+YGLAGRPKMA+K FLRIQTFGVRRSVRSLNTLLNALVQN RFSLVHLLFK+S+SK
Sbjct: 126 TVIRSYGLAGRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSLVHLLFKYSKSK 185

Query: 186 FGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVARGDMVS 245
           FGVVPNVFTCNILIKALC+KNDVEGARKV DEMPAMGMVPNVVTYTTILGGYV+RGDMV 
Sbjct: 186 FGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPAMGMVPNVVTYTTILGGYVSRGDMVG 245

Query: 246 AKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITYGVIIE 305
           AKRVFGELFDHGWLPDATTYTILM+GYIK GRFT+AVKVMDEMEENGVEPND+TYGVII 
Sbjct: 246 AKRVFGELFDHGWLPDATTYTILMDGYIKKGRFTDAVKVMDEMEENGVEPNDVTYGVIIL 305

Query: 306 AYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLSKNCTP 365
           AYC+E+KSGEALNLLNDMLEKKY+P+SALCCKVIDVLC EGRVKE CKLW KLL KNCTP
Sbjct: 306 AYCKEEKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCSEGRVKEACKLWEKLLKKNCTP 365

Query: 366 DNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEAARLWD 425
           DNAITSTLIHWLCKEGNIWEAR LFNEFE G+I SLLTYNTLI GMCE+GELCEAARLWD
Sbjct: 366 DNAITSTLIHWLCKEGNIWEARKLFNEFESGTISSLLTYNTLIGGMCEIGELCEAARLWD 425

Query: 426 DMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEGLLKLG 485
           DMLEKGC+PNEFTYNMLIKGFLK+GKAEEVIKV EEMLDKGCL NESTYS+L EGLLKLG
Sbjct: 426 DMLEKGCVPNEFTYNMLIKGFLKIGKAEEVIKVVEEMLDKGCLLNESTYSLLVEGLLKLG 485

Query: 486 KEGEFLNILLMFISSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533
           K  E  NIL M IS+G VD KAWH  +P FV N++EQ NMLEKILIET
Sbjct: 486 KGEELFNILSMIISNGAVDFKAWHFCIPHFVSNVNEQGNMLEKILIET 533

[Close]

BLAST of Cp4.1LG03g07130 vs. ExPASy TrEMBL
Match: A0A0A0LDM6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G589540 PE=4 SV=1)

HSP 1 Score: 928 bits (2399), Expect = 0.0
Identity = 453/528 (85.80%), Postives = 489/528 (92.61%), Query Frame = 0


Query: 6   RYNKFFPTSLHSPISNLPLRFIFTVDSSVQSYTVTPPIKPWPQRLYPKRLVAMIIRQQNL 65
           R N+F   SLH+PIS +PLRFIF V++ +QSYTVTPPIKPWPQRL+P RLVAMI RQQNL
Sbjct: 6   RSNRFKNISLHTPISIVPLRFIFAVETPLQSYTVTPPIKPWPQRLFPNRLVAMIRRQQNL 65

Query: 66  DLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGINCGEDLFI 125
           DLALQIFHYAGKYHP F+HNYDTYHAII+RLSRARAFEPVESLL EL++SGINC EDLFI
Sbjct: 66  DLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFI 125

Query: 126 SVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLLFKHSRSK 185
           +VIR+YGLA RPKMA+K FLRIQTFGVRRSVRSLNTLLNALVQN RFS VHLLFK+S+SK
Sbjct: 126 TVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSK 185

Query: 186 FGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYVARGDMVS 245
           FGVVPNVFTCNILIKALC+KNDVEGARKV DEMP+MG+VPNVVTYTTILGGYV+RGDM+ 
Sbjct: 186 FGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIG 245

Query: 246 AKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDITYGVIIE 305
           AKRVFGELFDHGWLPDATTYTILM+GY+K GRFT+AVKVMDEMEENGVEPNDITYGVII 
Sbjct: 246 AKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIIL 305

Query: 306 AYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKLLSKNCTP 365
            YC+E+KSGEALNLLNDMLEKKY+P+SALCCKVIDVLCGEGRVKE CK+W KLL KNCTP
Sbjct: 306 GYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTP 365

Query: 366 DNAITSTLIHWLCKEGNIWEARNLFNEFERGSIPSLLTYNTLIAGMCEMGELCEAARLWD 425
           DNAITSTLIHWLCKEGNIWEAR LFNEFERG+I SLLTYNTLIAGMCEMGELCEAARLWD
Sbjct: 366 DNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAARLWD 425

Query: 426 DMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSILAEGLLKLG 485
           DMLEKGC+PNEFTYNMLIKGFLKVGKA+EVIKV EEMLDKGCL NESTY IL EGLLKLG
Sbjct: 426 DMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLG 485

Query: 486 KEGEFLNILLMFISSGVVDDKAWHLFVPKFVCNMDEQANMLEKILIET 533
           K  E LNIL M ISSG VD KAW+LFVP FV N++EQAN+LEKILIET
Sbjct: 486 KREELLNILSMIISSGAVDFKAWNLFVPHFVSNVNEQANILEKILIET 533

[Close]

BLAST of Cp4.1LG03g07130 vs. TAIR 10
Match: AT5G16420.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 696.8 bits (1797), Expect = 1.3e-200
Identity = 324/504 (64.29%), Postives = 410/504 (81.35%), Query Frame = 0


Query: 32  SSVQSY-TVTPPIKPWPQRLYPKRLVAMIIRQQNLDLALQIFHYAGKYHPGFSHNYDTYH 91
           +S+Q Y T  PPIKPWPQRL+PKRLV+MI +QQN+DLALQIF YAGK HPGF+HNYDTYH
Sbjct: 28  ASLQQYCTEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYH 87

Query: 92  AIIHRLSRARAFEPVESLLGELKNS--GINCGEDLFISVIRNYGLAGRPKMAVKMFLRIQ 151
           +I+ +LSRARAF+PVESL+ +L+NS   I CGE+LFI ++RNYGLAGR + ++++FLRI 
Sbjct: 88  SILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIP 147

Query: 152 TFGVRRSVRSLNTLLNALVQNKRFSLVHLLFKHSRSKFGVVPNVFTCNILIKALCEKNDV 211
            FGV+RSVRSLNTLLN L+QN+RF LVH +FK+S+  FG+ PN+FTCN+L+KALC+KND+
Sbjct: 148 DFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 207

Query: 212 EGARKVSDEMPAMGMVPNVVTYTTILGGYVARGDMVSAKRVFGELFDHGWLPDATTYTIL 271
           E A KV DE+P+MG+VPN+VTYTTILGGYVARGDM SAKRV  E+ D GW PDATTYT+L
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267

Query: 272 MNGYIKLGRFTEAVKVMDEMEENGVEPNDITYGVIIEAYCREKKSGEALNLLNDMLEKKY 331
           M+GY KLGRF+EA  VMD+ME+N +EPN++TYGV+I A C+EKKSGEA N+ ++MLE+ +
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327

Query: 332 VPSSALCCKVIDVLCGEGRVKEGCKLWGKLLSKNCTPDNAITSTLIHWLCKEGNIWEARN 391
           +P S+LCCKVID LC + +V E C LW K+L  NC PDNA+ STLIHWLCKEG + EAR 
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARK 387

Query: 392 LFNEFERGSIPSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCMPNEFTYNMLIKGFLK 451
           LF+EFE+GSIPSLLTYNTLIAGMCE GEL EA RLWDDM E+ C PN FTYN+LI+G  K
Sbjct: 388 LFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSK 447

Query: 452 VGKAEEVIKVAEEMLDKGCLPNESTYSILAEGLLKLGKEGEFLNILLMFISSGVVDDKAW 511
            G  +E ++V EEML+ GC PN++T+ IL EGL KLGKE + + I+ M + +G VD ++W
Sbjct: 448 NGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESW 507

Query: 512 HLFVPKFVCNMDEQANMLEKILIE 533
            LF+ KF   +D+    L+++L E
Sbjct: 508 ELFLKKFAGELDKGVLPLKELLHE 531

[Close]

BLAST of Cp4.1LG03g07130 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 240.7 bits (613), Expect = 2.6e-63
Identity = 140/486 (28.81%), Postives = 257/486 (52.88%), Query Frame = 0


Query: 54  RLVAMIIRQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELK 113
           +L+  +  Q +   AL++F+ A K  P FS     Y  I+ RL R+ +F+ ++ +L ++K
Sbjct: 52  KLLDSLRSQPDDSAALRLFNLASK-KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK 111

Query: 114 NSGINCGEDLFISVIRNYG-LAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRF 173
           +S    G   F+ +I +Y     + ++   +   I  FG++      N +LN LV     
Sbjct: 112 SSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL 171

Query: 174 SLVHLLFKHSR-SKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYT 233
            LV +   H++ S +G+ P+V T N+LIKALC  + +  A  + ++MP+ G+VP+  T+T
Sbjct: 172 KLVEI--SHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 231

Query: 234 TILGGYVARGDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEM-EE 293
           T++ GY+  GD+  A R+  ++ + G      +  ++++G+ K GR  +A+  + EM  +
Sbjct: 232 TVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 291

Query: 294 NGVEPNDITYGVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKE 353
           +G  P+  T+  ++   C+      A+ +++ ML++ Y P       VI  LC  G VKE
Sbjct: 292 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 351

Query: 354 GCKLWGKLLSKNCTPDNAITSTLIHWLCKEGNIWEARNLFNEF-ERGSIPSLLTYNTLIA 413
             ++  ++++++C+P+    +TLI  LCKE  + EA  L      +G +P + T+N+LI 
Sbjct: 352 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 411

Query: 414 GMCEMGELCEAARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLP 473
           G+C       A  L+++M  KGC P+EFTYNMLI      GK +E + + ++M   GC  
Sbjct: 412 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 471

Query: 474 NESTYSILAEGLLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVC---NMDEQANML 533
           +  TY+ L +G  K  K  E   I       GV  +   +  +   +C    +++ A ++
Sbjct: 472 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 531

[Close]

BLAST of Cp4.1LG03g07130 vs. TAIR 10
Match: AT3G09060.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 235.7 bits (600), Expect = 8.4e-62
Identity = 150/490 (30.61%), Postives = 250/490 (51.02%), Query Frame = 0


Query: 46  WPQRLYPKRLVAMIIRQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPV 105
           +P+ L PK ++ ++  ++N   A  +F  A + HPG++H+   YH I+ RLS  R    V
Sbjct: 4   FPKSLSPKHVLKLLKSEKNPRAAFALFDSATR-HPGYAHSAVVYHHILRRLSETRMVNHV 63

Query: 106 ESLLGELKNSGINCGEDLFISVIRNYGLAGRPKMAVKMFLRI-QTFGVRRSVRSLNTLLN 165
             ++  +++    C ED+ +SVI+ YG    P  A+ +F R+ + FG   ++RS NTLLN
Sbjct: 64  SRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLN 123

Query: 166 ALVQNKRFSLVHLLFKHSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMV 225
           A V+ K++  V  LF +  +  GV PN+ T N+LIK  C+K + E AR   D M   G  
Sbjct: 124 AFVEAKQWVKVESLFAYFETA-GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK 183

Query: 226 PNVVTYTTILGGYVARGDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKV 285
           P+V +Y+T++      G +  A  +F E+ + G  PD T Y IL++G++K      A+++
Sbjct: 184 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 243

Query: 286 MDE-MEENGVEPNDITYGVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLC 345
            D  +E++ V PN  T+ ++I    +                                 C
Sbjct: 244 WDRLLEDSSVYPNVKTHNIMISGLSK---------------------------------C 303

Query: 346 GEGRVKEGCKLWGKLLSKNCTPDNAITSTLIHWLCKEGNIWEARNLFNEF-ERGSIPSLL 405
             GRV +  K+W ++       D    S+LIH LC  GN+ +A ++FNE  ER +   ++
Sbjct: 304 --GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 363

Query: 406 TYNTLIAGMCEMGELCEAARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEM 465
           TYNT++ G C  G++ E+  LW  M  K  + N  +YN+LIKG L+ GK +E   +   M
Sbjct: 364 TYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLM 423

Query: 466 LDKGCLPNESTYSILAEGLLKLGKEGEFLNILLMFISSGVVDDKAWHLFVPKFVC---NM 525
             KG   +++TY I   GL   G   + L ++    SSG   D   +  +   +C    +
Sbjct: 424 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL 455

Query: 526 DEQANMLEKI 530
           +E +N+++++
Sbjct: 484 EEASNLVKEM 455

[Close]

BLAST of Cp4.1LG03g07130 vs. TAIR 10
Match: AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 228.4 bits (581), Expect = 1.3e-59
Identity = 134/458 (29.26%), Postives = 233/458 (50.87%), Query Frame = 0


Query: 50  LYPKRLVAMIIRQQNLDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLL 109
           L PK + A+I  Q++   AL++F+   K   GF H   TY ++I +L     FE +E +L
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRK-EVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 64

Query: 110 GELK-NSGINCGEDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQ 169
            +++ N G +  E +++  ++NYG  G+ + AV +F R+  +    +V S N +++ LV 
Sbjct: 65  VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 124

Query: 170 NKRFSLVHLLFKHSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVV 229
           +  F   H ++   R + G+ P+V++  I +K+ C+ +    A ++ + M + G   NVV
Sbjct: 125 SGYFDQAHKVYMRMRDR-GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 184

Query: 230 TYTTILGGYVARGDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEM 289
            Y T++GG+           +FG++   G     +T+  L+    K G   E  K++D++
Sbjct: 185 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 244

Query: 290 EENGVEPNDITYGVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRV 349
            + GV PN  TY + I+  C+  +   A+ ++  ++E+   P       +I  LC   + 
Sbjct: 245 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 304

Query: 350 KEGCKLWGKLLSKNCTPDNAITSTLIHWLCKEGNIWEARNLFNE-FERGSIPSLLTYNTL 409
           +E     GK++++   PD+   +TLI   CK G +  A  +  +    G +P   TY +L
Sbjct: 305 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 364

Query: 410 IAGMCEMGELCEAARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGC 469
           I G+C  GE   A  L+++ L KG  PN   YN LIKG    G   E  ++A EM +KG 
Sbjct: 365 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 424

Query: 470 LPNESTYSILAEGLLKLGKEGEFLNILLMFISSGVVDD 506
           +P   T++IL  GL K+G   +   ++ + IS G   D
Sbjct: 425 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460

[Close]

BLAST of Cp4.1LG03g07130 vs. TAIR 10
Match: AT3G48810.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 227.6 bits (579), Expect = 2.3e-59
Identity = 135/430 (31.40%), Postives = 221/430 (51.40%), Query Frame = 0


Query: 60  IRQQN-LDLALQIFHYAGKYHPGFSHNYDTYHAIIHRLSRARAFEPVESLLGELKNSGIN 119
           +RQ++ + LAL  F      +  F H   T+  +I +L+     + V+ LL ++K  G +
Sbjct: 50  LRQESCVPLALHFFKSIANSNL-FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFH 109

Query: 120 CGEDLFISVIRNYGLAGRPKMAVKMFLRIQTFGVRRSVRSLNTLLNALVQNKRFSLVHLL 179
           C EDLFISVI  Y   G  + AV+MF RI+ FG   SV+  N +L+ L+   R  +++++
Sbjct: 110 CSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMV 169

Query: 180 FKHSRSKFGVVPNVFTCNILIKALCEKNDVEGARKVSDEMPAMGMVPNVVTYTTILGGYV 239
           ++  + + G  PNVFT N+L+KALC+ N V+GA+K+  EM   G  P+ V+YTT++    
Sbjct: 170 YRDMK-RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 229

Query: 240 ARGDMVSAKRVFGELFDHGWLPDATTYTILMNGYIKLGRFTEAVKVMDEMEENGVEPNDI 299
             G +V   R   E F+    P  + Y  L+NG  K   +  A ++M EM E G+ PN I
Sbjct: 230 EVG-LVKEGRELAERFE----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 289

Query: 300 TYGVIIEAYCREKKSGEALNLLNDMLEKKYVPSSALCCKVIDVLCGEGRVKEGCKLWGKL 359
           +Y  +I   C   +   A + L  ML++   P+      ++      G   +   LW ++
Sbjct: 290 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 349

Query: 360 L-SKNCTPDNAITSTLIHWLCKEGNIWEARNLFNEFER-GSIPSLLTYNTLIAGMCEMGE 419
           +      P+    +TL+   C  GNI +A ++F+  E  G  P++ TY +LI G  + G 
Sbjct: 350 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 409

Query: 420 LCEAARLWDDMLEKGCMPNEFTYNMLIKGFLKVGKAEEVIKVAEEMLDKGCLPNESTYSI 479
           L  A  +W+ ML  GC PN   Y  +++   +  K +E   + E M  + C P+  T++ 
Sbjct: 410 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 469

Query: 480 LAEGLLKLGK 487
             +GL   G+
Sbjct: 470 FIKGLCDAGR 472

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g07130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFE3	1.9e-199	64.29	Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidop...	[more]
Q9LFF1	3.7e-62	28.81	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]
Q9SS81	1.2e-60	30.61	Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX...	[more]
Q9CA58	1.9e-58	29.26	Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th...	[more]
Q9M302	3.2e-58	31.40	Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX...	[more]

BLAST of Cp4.1LG03g07130 vs. NCBI nr


Match Name	Identity	Description
XP_023528110.1	100.00	pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita ...	[more]
XP_022934977.1	98.12	pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita ...	[more]
KAG7017816.1	97.37	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG6581089.1	97.19	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022982687.1	96.62	pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita ...	[more]

BLAST of Cp4.1LG03g07130 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1F4B0	98.12	pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Cucurbit...	[more]
A0A6J1J5I0	96.62	pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Cucurbit...	[more]
A0A6J1DN12	88.74	pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Momordic...	[more]
A0A1S3BPE8	85.61	pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Cucumis ...	[more]
A0A0A0LDM6	85.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G589540 PE=4 SV=1	[more]

BLAST of Cp4.1LG03g07130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16420.1	1.3e-200	64.29	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT3G53700.1	2.6e-63	28.81	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G09060.1	8.4e-62	30.61	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G74580.1	1.3e-59	29.26	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G48810.1	2.3e-59	31.40	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 338..363 e-value: 1.2 score: 9.5 coord: 126..152 e-value: 0.17 score: 12.2 coord: 371..395 e-value: 0.0033 score: 17.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 228..262 e-value: 1.4E-5 score: 22.9 coord: 403..436 e-value: 4.9E-8 score: 30.7 coord: 437..471 e-value: 1.3E-8 score: 32.5 coord: 158..192 e-value: 0.0027 score: 15.8 coord: 264..296 e-value: 3.6E-11 score: 40.5 coord: 193..227 e-value: 6.7E-8 score: 30.2 coord: 335..366 e-value: 1.3E-4 score: 20.0 coord: 298..331 e-value: 3.8E-7 score: 27.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 190..236 e-value: 3.4E-13 score: 49.6 coord: 399..447 e-value: 3.4E-16 score: 59.2 coord: 260..309 e-value: 2.9E-16 score: 59.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 296..330 score: 11.454616
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 400..434 score: 12.627475
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 191..225 score: 11.597113
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 331..365 score: 8.648523
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 226..260 score: 10.511944
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 435..469 score: 12.813817
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 261..295 score: 13.942831
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 278..383 e-value: 2.4E-24 score: 87.7 coord: 170..277 e-value: 7.9E-30 score: 105.6 coord: 52..169 e-value: 1.6E-16 score: 62.2 coord: 384..492 e-value: 3.1E-29 score: 103.6
None	No IPR available	PANTHER	PTHR47934:SF13	OS06G0125300 PROTEIN	coord: 33..532
None	No IPR available	PANTHER	PTHR47934	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL	coord: 33..532

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g07130.1	Cp4.1LG03g07130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding