Cp4.1LG03g06160 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g06160
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	agamous-like MADS-box protein AGL6
Location	Cp4.1LG03: 4271972 .. 4273225 (-)
RNA-Seq Expression	Cp4.1LG03g06160
Synteny	Cp4.1LG03g06160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGAGGAACACTGAGCCTTAAACTGATTTCCAATCCTAAAAGTCGAAGAACAACGTTTCAGAAGAGGAAGAAAAGTCTGATGAAGAAAGCTTATGAGCTTTCCACTCTTTGCGATGTTCAAACCTGCGTTGTAATCGCTTCTGACGAATTCCAAACCTGGCCTTCCGATCGTAACCAAGTCGAGGCTATGATCCGTTCTTATAAATCCCAATCTTTCTGTAAACACTCCGCTAAGTCTTCTTATGATTTGAACCAATTCTTCTCTGATCGCAAGAACAAAATCGTAACGGAAACGTCCAAATTAAGAGACAAAGTTCAGAAAAGTAAGGACACCAACAGTGATCACTGCCTTGATTCACTGTCGGAACATCAATTGAAGGTGTTATTGGCCACTTTAGATTCCAAAATTGGAGTCGCTGACAGTATGATTGAGTTCATGGAGGCTGATTATGATTACTTAATCGAGGGAGCCGTTGAAATTTCAAGCATTGATAAACAAACATTAAGTCCTTTGGAAACAGAGGCATCCCCTAAATTAAACATCTCAGAGTTAGACATGGAAGCTAACTACGATCACTTGATCGGGGGAGACACTGAAATTTTAAGCGTTGATACACAAACATTTAGTCCTTTCGAAACAGAATTATCCACTGAATTCGATGTCTCAGAGATGTTCATGGAATCTAATTACGATCCCTTGATCGAGGGAGACGCTGAAATTGTAAGCATTGATACACAAACATTCAGTCCTTTCGAAACAGAGTTATCCACTGAATTCGATGTCTCAGAGATGTTCATGGAATCTAATTACGATAACTTGATCGAAGGAGCCGCTGAAATTGTAAGCAATGATACACAAACATTCAGTCCTTTCGAAACAGAGGCATCCCCTGAATTCGATGTATCAGAGATGTTAATGGAGGCTAATTACGATCCCTTGATCGAGGGAGCCGCTGAAATTGTAAGCATTGATACACAAACATCCAGTCCTTTGGAAACAGAGTCATCTCCTGAATTAAACCTTTCAGAGATTTTCATGGAGGCTATTCACGATGACTTGATCGAGGAACCCACTGAAATTCCAACATTAAATTCTTTGGAAACAGAGGTATTCTCTGAATTAGACATCTCGGAATTATTGGCCGGGTCAGGCGAGTTTGAATTCAATGTCGAGGGTTTTCAATCACTATTGGAGGACGAAGATCACCAAACCCTAGCTGAGAATCATTCCTTTATCTTCCAATCCTAA

mRNA sequence

ATGGGGAGAGGAACACTGAGCCTTAAACTGATTTCCAATCCTAAAAGTCGAAGAACAACGTTTCAGAAGAGGAAGAAAAGTCTGATGAAGAAAGCTTATGAGCTTTCCACTCTTTGCGATGTTCAAACCTGCGTTGTAATCGCTTCTGACGAATTCCAAACCTGGCCTTCCGATCGTAACCAAGTCGAGGCTATGATCCGTTCTTATAAATCCCAATCTTTCTGTAAACACTCCGCTAAGTCTTCTTATGATTTGAACCAATTCTTCTCTGATCGCAAGAACAAAATCGTAACGGAAACGTCCAAATTAAGAGACAAAGTTCAGAAAAGTAAGGACACCAACAGTGATCACTGCCTTGATTCACTGTCGGAACATCAATTGAAGGTGTTATTGGCCACTTTAGATTCCAAAATTGGAGTCGCTGACAGTATGATTGAGTTCATGGAGGCTGATTATGATTACTTAATCGAGGGAGCCGTTGAAATTTCAAGCATTGATAAACAAACATTAAGTCCTTTGGAAACAGAGGCATCCCCTAAATTAAACATCTCAGAGTTAGACATGGAAGCTAACTACGATCACTTGATCGGGGGAGACACTGAAATTTTAAGCGTTGATACACAAACATTTAGTCCTTTCGAAACAGAATTATCCACTGAATTCGATGTCTCAGAGATGTTCATGGAATCTAATTACGATCCCTTGATCGAGGGAGACGCTGAAATTGTAAGCATTGATACACAAACATTCAGTCCTTTCGAAACAGAGTTATCCACTGAATTCGATGTCTCAGAGATGTTCATGGAATCTAATTACGATAACTTGATCGAAGGAGCCGCTGAAATTGTAAGCAATGATACACAAACATTCAGTCCTTTCGAAACAGAGGCATCCCCTGAATTCGATGTATCAGAGATGTTAATGGAGGCTAATTACGATCCCTTGATCGAGGGAGCCGCTGAAATTGTAAGCATTGATACACAAACATCCAGTCCTTTGGAAACAGAGTCATCTCCTGAATTAAACCTTTCAGAGATTTTCATGGAGGCTATTCACGATGACTTGATCGAGGAACCCACTGAAATTCCAACATTAAATTCTTTGGAAACAGAGGTATTCTCTGAATTAGACATCTCGGAATTATTGGCCGGGTCAGGCGAGTTTGAATTCAATGTCGAGGGTTTTCAATCACTATTGGAGGACGAAGATCACCAAACCCTAGCTGAGAATCATTCCTTTATCTTCCAATCCTAA

Coding sequence (CDS)

ATGGGGAGAGGAACACTGAGCCTTAAACTGATTTCCAATCCTAAAAGTCGAAGAACAACGTTTCAGAAGAGGAAGAAAAGTCTGATGAAGAAAGCTTATGAGCTTTCCACTCTTTGCGATGTTCAAACCTGCGTTGTAATCGCTTCTGACGAATTCCAAACCTGGCCTTCCGATCGTAACCAAGTCGAGGCTATGATCCGTTCTTATAAATCCCAATCTTTCTGTAAACACTCCGCTAAGTCTTCTTATGATTTGAACCAATTCTTCTCTGATCGCAAGAACAAAATCGTAACGGAAACGTCCAAATTAAGAGACAAAGTTCAGAAAAGTAAGGACACCAACAGTGATCACTGCCTTGATTCACTGTCGGAACATCAATTGAAGGTGTTATTGGCCACTTTAGATTCCAAAATTGGAGTCGCTGACAGTATGATTGAGTTCATGGAGGCTGATTATGATTACTTAATCGAGGGAGCCGTTGAAATTTCAAGCATTGATAAACAAACATTAAGTCCTTTGGAAACAGAGGCATCCCCTAAATTAAACATCTCAGAGTTAGACATGGAAGCTAACTACGATCACTTGATCGGGGGAGACACTGAAATTTTAAGCGTTGATACACAAACATTTAGTCCTTTCGAAACAGAATTATCCACTGAATTCGATGTCTCAGAGATGTTCATGGAATCTAATTACGATCCCTTGATCGAGGGAGACGCTGAAATTGTAAGCATTGATACACAAACATTCAGTCCTTTCGAAACAGAGTTATCCACTGAATTCGATGTCTCAGAGATGTTCATGGAATCTAATTACGATAACTTGATCGAAGGAGCCGCTGAAATTGTAAGCAATGATACACAAACATTCAGTCCTTTCGAAACAGAGGCATCCCCTGAATTCGATGTATCAGAGATGTTAATGGAGGCTAATTACGATCCCTTGATCGAGGGAGCCGCTGAAATTGTAAGCATTGATACACAAACATCCAGTCCTTTGGAAACAGAGTCATCTCCTGAATTAAACCTTTCAGAGATTTTCATGGAGGCTATTCACGATGACTTGATCGAGGAACCCACTGAAATTCCAACATTAAATTCTTTGGAAACAGAGGTATTCTCTGAATTAGACATCTCGGAATTATTGGCCGGGTCAGGCGAGTTTGAATTCAATGTCGAGGGTTTTCAATCACTATTGGAGGACGAAGATCACCAAACCCTAGCTGAGAATCATTCCTTTATCTTCCAATCCTAA

Protein sequence

MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRNQVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLDSLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLETEASPKLNISELDMEANYDHLIGGDTEILSVDTQTFSPFETELSTEFDVSEMFMESNYDPLIEGDAEIVSIDTQTFSPFETELSTEFDVSEMFMESNYDNLIEGAAEIVSNDTQTFSPFETEASPEFDVSEMLMEANYDPLIEGAAEIVSIDTQTSSPLETESSPELNLSEIFMEAIHDDLIEEPTEIPTLNSLETEVFSELDISELLAGSGEFEFNVEGFQSLLEDEDHQTLAENHSFIFQS

Homology

[Close]

BLAST of Cp4.1LG03g06160 vs. ExPASy Swiss-Prot
Match: Q9FIM0 (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.3e-11
Identity = 52/147 (35.37%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 6   LSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVI-----ASD----EFQTWP 65
           + L+ I+N K+R TT++KRK SL KKA E STLC V+TC+++     A+D    E + WP
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIWP 65

Query: 66  SDRNQVEAMIRSYKSQSFCKHSAKSSYDLNQFFSD--RKNKIVTETSKLRDKVQKSKDTN 125
            D  +V A+IR YK       S +   ++  F +D  + N++VT+    R+    S +  
Sbjct: 66  KDETKVRAIIRKYKDT--VSTSCRKETNVETFVNDVGKGNEVVTKKRVKRENKYSSWEEK 125

Query: 126 SDHCLDSLSEHQLKVLLATLDSKIGVA 142
            D C    S  QL  +   +DSK+  A
Sbjct: 126 LDKC----SREQLHGIFCAVDSKLNEA 146

[Close]

BLAST of Cp4.1LG03g06160 vs. ExPASy Swiss-Prot
Match: Q2QW53 (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS13 PE=1 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 3.0e-11
Identity = 53/173 (30.64%), Postives = 92/173 (53.18%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWP-SDR 60
           MGRG + +K I N  SR+ TF KR+  L+KKAYELS LCD +  +++ S   + +  S+ 
Sbjct: 1   MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60

Query: 61  NQVEAMIRSYKSQSFCKHSAKS---SYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSD 120
           N V+A I  YK    C  ++ +     +  Q++         E++KLR ++Q  ++TN  
Sbjct: 61  NNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQ-------ESAKLRHQIQMLQNTNKH 120

Query: 121 HCLDSLSEHQLKVLLATLDSKIGVADSMI-----EFMEADYDYLIEGAVEISS 165
              D++S   LK  L  L+S++    S I     E + ++ +Y+ +  +E+ +
Sbjct: 121 LVGDNVSNLSLKE-LKQLESRLEKGISKIRARKNELLASEINYMAKREIELQN 165

[Close]

BLAST of Cp4.1LG03g06160 vs. ExPASy Swiss-Prot
Match: F6I457 (Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.0e-11
Identity = 50/168 (29.76%), Postives = 89/168 (52.98%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN 60
           MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  +++ S   + +    N
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRVYEYSNN 60

Query: 61  QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTN---SDH 120
            +++ I  YK  S    +  S+ ++N  +  +      E++KLR ++Q  +++N      
Sbjct: 61  NIKSTIDRYKKASSDSTNGGSTMEINAQYYQQ------ESAKLRQQIQMLQNSNRHLMGD 120

Query: 121 CLDSLSEHQLKVLLATLDSKI-GVADSMIEFMEADYDYLIEGAVEISS 165
            L SL+  +LK L   L+  I  +     E + A+ +YL +  +E+ +
Sbjct: 121 SLASLTVKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELEN 162

[Close]

BLAST of Cp4.1LG03g06160 vs. ExPASy Swiss-Prot
Match: A0A217EJJ0 (Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.0e-11
Identity = 50/168 (29.76%), Postives = 89/168 (52.98%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN 60
           MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  +++ S   + +    N
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRVYEYSNN 60

Query: 61  QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTN---SDH 120
            +++ I  YK  S    +  S+ ++N  +  +      E++KLR ++Q  +++N      
Sbjct: 61  NIKSTIDRYKKASSDSTNGGSTMEINAQYYQQ------ESAKLRQQIQMLQNSNRHLMGD 120

Query: 121 CLDSLSEHQLKVLLATLDSKI-GVADSMIEFMEADYDYLIEGAVEISS 165
            L SL+  +LK L   L+  I  +     E + A+ +YL +  +E+ +
Sbjct: 121 SLASLTVKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELEN 162

[Close]

BLAST of Cp4.1LG03g06160 vs. ExPASy Swiss-Prot
Match: Q38836 (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana OX=3702 GN=AGL11 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.8e-11
Identity = 53/206 (25.73%), Postives = 104/206 (50.49%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN 60
           MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  +++ S   + +    N
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLD 120
            + + I  YK       +  +  ++N  +  +      E++KLR ++Q  +++N +   D
Sbjct: 61  NIRSTIERYKKACSDSTNTSTVQEINAAYYQQ------ESAKLRQQIQTIQNSNRNLMGD 120

Query: 121 SLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLETEASPK 180
           SLS   +K  L  +++++  A S I      ++ L+   VEI +  K+ +         +
Sbjct: 121 SLSSLSVKE-LKQVENRLEKAISRIR--SKKHELLL---VEIENAQKREIELDNENIYLR 180

Query: 181 LNISELDMEANYDHLIGGDTEILSVD 207
             ++E++    + H +   +EI +++
Sbjct: 181 TKVAEVERYQQHHHQMVSGSEINAIE 194

[Close]

BLAST of Cp4.1LG03g06160 vs. NCBI nr
Match: XP_023526169.1 (agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 796 bits (2057), Expect = 3.61e-290
Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN 60
           MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN 60

Query: 61  QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLD 120
           QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLD
Sbjct: 61  QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLD 120

Query: 121 SLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLETEASPK 180
           SLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLETEASPK
Sbjct: 121 SLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLETEASPK 180

Query: 181 LNISELDMEANYDHLIGGDTEILSVDTQTFSPFETELSTEFDVSEMFMESNYDPLIEGDA 240
           LNISELDMEANYDHLIGGDTEILSVDTQTFSPFETELSTEFDVSEMFMESNYDPLIEGDA
Sbjct: 181 LNISELDMEANYDHLIGGDTEILSVDTQTFSPFETELSTEFDVSEMFMESNYDPLIEGDA 240

Query: 241 EIVSIDTQTFSPFETELSTEFDVSEMFMESNYDNLIEGAAEIVSNDTQTFSPFETEASPE 300
           EIVSIDTQTFSPFETELSTEFDVSEMFMESNYDNLIEGAAEIVSNDTQTFSPFETEASPE
Sbjct: 241 EIVSIDTQTFSPFETELSTEFDVSEMFMESNYDNLIEGAAEIVSNDTQTFSPFETEASPE 300

Query: 301 FDVSEMLMEANYDPLIEGAAEIVSIDTQTSSPLETESSPELNLSEIFMEAIHDDLIEEPT 360
           FDVSEMLMEANYDPLIEGAAEIVSIDTQTSSPLETESSPELNLSEIFMEAIHDDLIEEPT
Sbjct: 301 FDVSEMLMEANYDPLIEGAAEIVSIDTQTSSPLETESSPELNLSEIFMEAIHDDLIEEPT 360

Query: 361 EIPTLNSLETEVFSELDISELLAGSGEFEFNVEGFQSLLEDEDHQTLAENHSFIFQS 417
           EIPTLNSLETEVFSELDISELLAGSGEFEFNVEGFQSLLEDEDHQTLAENHSFIFQS
Sbjct: 361 EIPTLNSLETEVFSELDISELLAGSGEFEFNVEGFQSLLEDEDHQTLAENHSFIFQS 417

[Close]

BLAST of Cp4.1LG03g06160 vs. NCBI nr
Match: XP_022934582.1 (agamous-like MADS-box protein AGL6 [Cucurbita moschata])

HSP 1 Score: 717 bits (1850), Expect = 5.75e-258
Identity = 388/458 (84.72%), Postives = 398/458 (86.90%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN 60
           MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIAS+EF+TWPSDR 
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASEEFETWPSDRT 60

Query: 61  QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLD 120
           QVEAMIRSYKSQSFCK SAKSSYDLNQFFSDRKNKIVTETSKLR+KVQKSKDTNSDHCLD
Sbjct: 61  QVEAMIRSYKSQSFCKQSAKSSYDLNQFFSDRKNKIVTETSKLREKVQKSKDTNSDHCLD 120

Query: 121 SLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLETEASPK 180
           SLSEHQLK L+ATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQ  SPLETEASP+
Sbjct: 121 SLSEHQLKALMATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQIFSPLETEASPE 180

Query: 181 LNISELDMEANYDHLIGGDTEILSVDTQTFSPFETELSTEFDVSEMFMESNYDPLIEGDA 240
           LNISEL MEANYD+LI GDTEILSVDTQT SPFETELSTEFDVSEMFMESNYDPLI+GDA
Sbjct: 181 LNISELGMEANYDYLIEGDTEILSVDTQTLSPFETELSTEFDVSEMFMESNYDPLIKGDA 240

Query: 241 -----------------------------------------EIVSIDTQTFSPFETELST 300
                                                    EIVSIDTQTFSP ETE ST
Sbjct: 241 KIVSIDTQKTFSPFETEASPEFDVSEMLMEANNNHLIEGAAEIVSIDTQTFSPLETEAST 300

Query: 301 EFDVSEMFMESNYDNLIEGAAEIVSNDTQTFSPFETEASPEFDVSEMLMEANYDPLIEGA 360
           EFDVSEMFMESNYD LIEGAAEIVS DTQTFSPFET+ SPEFDVSEM MEAN D LIEGA
Sbjct: 301 EFDVSEMFMESNYDPLIEGAAEIVSIDTQTFSPFETDVSPEFDVSEMFMEANNDHLIEGA 360

Query: 361 AEIVSIDTQTSSPLETESSPELNLSEIFMEAIHDDLIEEPTEIPTLNSLETEVFSELDIS 417
           AEIVSIDTQTS PLETESSPELN SE FMEAI+DD+IEEPTEIPTLNSLETEVFSELDIS
Sbjct: 361 AEIVSIDTQTSHPLETESSPELNFSETFMEAIYDDMIEEPTEIPTLNSLETEVFSELDIS 420

[Close]

BLAST of Cp4.1LG03g06160 vs. NCBI nr
Match: KAG7017922.1 (Agamous-like MADS-box protein AGL82, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 702 bits (1811), Expect = 5.18e-252
Identity = 380/459 (82.79%), Postives = 393/459 (85.62%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN 60
           MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIAS+EF+TWPSDR 
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASEEFETWPSDRT 60

Query: 61  QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLD 120
           QVEAMIRSYKSQSFCK SAKSSYDLNQFFSDRKNKIVTETSKLR+KVQKSKDTNSDHCLD
Sbjct: 61  QVEAMIRSYKSQSFCKQSAKSSYDLNQFFSDRKNKIVTETSKLREKVQKSKDTNSDHCLD 120

Query: 121 SLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLETEASPK 180
           SLSEHQLK L+ TLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQT SPLETEASPK
Sbjct: 121 SLSEHQLKALMVTLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTFSPLETEASPK 180

Query: 181 LNISELDMEANYDHLIGGDTEILSVDTQTFSPFETELSTEFDVSEMFMESNYDPLIEGDA 240
           LNI EL MEANYD+LI GDTEILSVDTQT SPFETELSTEFDVSEMFMESNYDPLI+GDA
Sbjct: 181 LNIPELGMEANYDYLIRGDTEILSVDTQTLSPFETELSTEFDVSEMFMESNYDPLIKGDA 240

Query: 241 EIVSIDTQTFSPFETELSTEFDVSEMFMESNYDNLIEGAAEIVSNDTQTFSPFETEASPE 300
           EIVSIDTQTFSPFETE S EFDVSEM ME+N D+LIEGAAEIVS DTQTFSP E EAS E
Sbjct: 241 EIVSIDTQTFSPFETEASPEFDVSEMLMEANNDHLIEGAAEIVSIDTQTFSPLEIEASTE 300

Query: 301 FDVSEMLMEANYDPLIEGAAEIVSIDTQT------------------------------- 360
           FDVSEM ME+NYDPLIEGAAEIVSIDTQT                               
Sbjct: 301 FDVSEMFMESNYDPLIEGAAEIVSIDTQTFSPFETDVSSEFNVSEMFMEANNDHLIEVAA 360

Query: 361 -----------SSPLETESSPELNLSEIFMEAIHDDLIEEPTEIPTLNSLETEVFSELDI 417
                      S+PLETESSPELN SE F E I+DD+IEEPTEIPTLN+LETEVFSELDI
Sbjct: 361 EITNIDTQTSRSNPLETESSPELNFSETFREGIYDDMIEEPTEIPTLNALETEVFSELDI 420

[Close]

BLAST of Cp4.1LG03g06160 vs. NCBI nr
Match: KAG6581182.1 (Agamous-like MADS-box protein AGL82, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 684 bits (1765), Expect = 5.21e-245
Identity = 373/459 (81.26%), Postives = 388/459 (84.53%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN 60
           MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIAS+EF+TWPSDR 
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASEEFETWPSDRT 60

Query: 61  QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLD 120
           QVEAMIRSYKSQSFCK SAKSSYDLNQFFSDRKNKIVTETSKLR+KVQKSKDTNSD  LD
Sbjct: 61  QVEAMIRSYKSQSFCKQSAKSSYDLNQFFSDRKNKIVTETSKLREKVQKSKDTNSDDHLD 120

Query: 121 SLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLETEASPK 180
           SLSEHQLK L+ATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQT  PLETEASP+
Sbjct: 121 SLSEHQLKALMATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTFRPLETEASPE 180

Query: 181 LNISELDMEANYDHLIGGDTEILSVDTQTFSPFETELSTEFDVSEMFMESNYDPLIEGDA 240
           LNI EL MEANYD+LI GDTEILSVDTQT SPFE ELST+FDVSEMF ESNYDPLI+GDA
Sbjct: 181 LNIPELGMEANYDYLIRGDTEILSVDTQTLSPFEIELSTKFDVSEMFTESNYDPLIKGDA 240

Query: 241 EIVSIDTQTFSPFETELSTEFDVSEMFMESNYDNLIEGAAEIVSNDTQTFSPFETEASPE 300
           EIVSIDTQTFSPFETE S EFDVSEM ME+N D+LIEGAAEIVS DTQTFSP E EAS E
Sbjct: 241 EIVSIDTQTFSPFETEASPEFDVSEMLMEANNDHLIEGAAEIVSIDTQTFSPLEIEASTE 300

Query: 301 FDVSEMLMEANYDPLIEGAAEIVSIDTQTSSPLETE------------------------ 360
           FDVSEM ME+NYDPLIEGAAEIVSIDTQT SP ET+                        
Sbjct: 301 FDVSEMFMESNYDPLIEGAAEIVSIDTQTFSPFETDVSPEFDVSEMFMEANNDHLIEVAA 360

Query: 361 ------------------SSPELNLSEIFMEAIHDDLIEEPTEIPTLNSLETEVFSELDI 417
                             SSPELN SE FME I+DD+IEEPTEIPTLN+LETEVFSELDI
Sbjct: 361 KITNIDTQTSRSNPWERVSSPELNFSETFMEGIYDDMIEEPTEIPTLNALETEVFSELDI 420

[Close]

BLAST of Cp4.1LG03g06160 vs. NCBI nr
Match: XP_038887166.1 (MADS-box protein SVP-like [Benincasa hispida])

HSP 1 Score: 303 bits (775), Expect = 2.86e-96
Identity = 216/439 (49.20%), Postives = 259/439 (59.00%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASD-----EFQTW 60
           MGRGTL+LKLI N KSRRTTF KRKKSLMKKAYELSTLCDVQTCV IASD      F+TW
Sbjct: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60

Query: 61  PSDRNQVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNS 120
           P + +Q+ +MIRSYKS SF K S ++SY+L+QFFS R NKI TETSKLR  V K KD + 
Sbjct: 61  PPNHDQIHSMIRSYKSHSFPKLS-RNSYNLHQFFSHRMNKIATETSKLRHNVDKFKDRH- 120

Query: 121 DHCLDSLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLET 180
              LDSLSEHQL+ LLA+LDSKIGV D MI+FMEADYD+LIE     SSID  +  P ET
Sbjct: 121 ---LDSLSEHQLEELLASLDSKIGVVDGMIQFMEADYDHLIEEVSGFSSIDTPSFLPSET 180

Query: 181 EASPKLNISELDMEANYDHLIGGDTEILSVDTQTFSPFETELSTEFDVSEMFMESNYDPL 240
           + +P+L+I+E         LIG +                    E++V E FME++   L
Sbjct: 181 KETPELDITEW--------LIGTN------------------GLEYNVEE-FMETDNGHL 240

Query: 241 IEGDAEIVSIDTQTFSPFETELSTEFDVSEM-------------FMESNYDNLIEGAAEI 300
           IE  + I+SIDT +FSPFETE   E D+SE+             F+E+N D+LIE A+ I
Sbjct: 241 IEETSGILSIDTPSFSPFETE---ELDISELLIGPNGLEYNVEEFVEANNDHLIEEASRI 300

Query: 301 VSNDTQTFSPFETEASPEFDVSEML-------------MEANYDPLIEGAAEIVSIDTQT 360
              +T +FSPFETE   E  +SE+L             MEAN D LIE A+ I SI+T +
Sbjct: 301 SGINTPSFSPFETE---ELGISELLIGTNGLEYNVEKLMEANNDHLIEEASAISSINTPS 360

Query: 361 SSPLETESSPELNLSEIFMEAIHDDLIEEPTEIPTLNSLETEVFSELDISELLAGSGEFE 408
            SP ETE                                      ELDISELL     FE
Sbjct: 361 FSPFETE--------------------------------------ELDISELLIEPDGFE 363

[Close]

BLAST of Cp4.1LG03g06160 vs. ExPASy TrEMBL
Match: A0A6J1F370 (agamous-like MADS-box protein AGL6 OS=Cucurbita moschata OX=3662 GN=LOC111441717 PE=4 SV=1)

HSP 1 Score: 717 bits (1850), Expect = 2.79e-258
Identity = 388/458 (84.72%), Postives = 398/458 (86.90%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN 60
           MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIAS+EF+TWPSDR 
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASEEFETWPSDRT 60

Query: 61  QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLD 120
           QVEAMIRSYKSQSFCK SAKSSYDLNQFFSDRKNKIVTETSKLR+KVQKSKDTNSDHCLD
Sbjct: 61  QVEAMIRSYKSQSFCKQSAKSSYDLNQFFSDRKNKIVTETSKLREKVQKSKDTNSDHCLD 120

Query: 121 SLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLETEASPK 180
           SLSEHQLK L+ATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQ  SPLETEASP+
Sbjct: 121 SLSEHQLKALMATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQIFSPLETEASPE 180

Query: 181 LNISELDMEANYDHLIGGDTEILSVDTQTFSPFETELSTEFDVSEMFMESNYDPLIEGDA 240
           LNISEL MEANYD+LI GDTEILSVDTQT SPFETELSTEFDVSEMFMESNYDPLI+GDA
Sbjct: 181 LNISELGMEANYDYLIEGDTEILSVDTQTLSPFETELSTEFDVSEMFMESNYDPLIKGDA 240

Query: 241 -----------------------------------------EIVSIDTQTFSPFETELST 300
                                                    EIVSIDTQTFSP ETE ST
Sbjct: 241 KIVSIDTQKTFSPFETEASPEFDVSEMLMEANNNHLIEGAAEIVSIDTQTFSPLETEAST 300

Query: 301 EFDVSEMFMESNYDNLIEGAAEIVSNDTQTFSPFETEASPEFDVSEMLMEANYDPLIEGA 360
           EFDVSEMFMESNYD LIEGAAEIVS DTQTFSPFET+ SPEFDVSEM MEAN D LIEGA
Sbjct: 301 EFDVSEMFMESNYDPLIEGAAEIVSIDTQTFSPFETDVSPEFDVSEMFMEANNDHLIEGA 360

Query: 361 AEIVSIDTQTSSPLETESSPELNLSEIFMEAIHDDLIEEPTEIPTLNSLETEVFSELDIS 417
           AEIVSIDTQTS PLETESSPELN SE FMEAI+DD+IEEPTEIPTLNSLETEVFSELDIS
Sbjct: 361 AEIVSIDTQTSHPLETESSPELNFSETFMEAIYDDMIEEPTEIPTLNSLETEVFSELDIS 420

[Close]

BLAST of Cp4.1LG03g06160 vs. ExPASy TrEMBL
Match: A0A0A0LAL9 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G258140 PE=4 SV=1)

HSP 1 Score: 194 bits (492), Expect = 3.65e-56
Identity = 115/191 (60.21%), Postives = 135/191 (70.68%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASD-----EFQTW 60
           MGRG LSLKLI NPKSRRTTF KRKKSL+KKAYELSTLCDVQTC+ IASD      F+TW
Sbjct: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETW 60

Query: 61  PSDRNQVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNS 120
           P + +Q+  MIRSYKS SF K +  SSYDLN+FFSDRKNKI+T TSKL   V        
Sbjct: 61  PPNHHQIHQMIRSYKSHSFTKPN--SSYDLNRFFSDRKNKILTNTSKLLHNV-------- 120

Query: 121 DHCLDSLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLET 180
              +D  SEHQL  LL  LDSKI VA+ MIEFMEADYD+LI+ A+ + +   QT    E 
Sbjct: 121 ---VDHQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIGMDTPPSQT----ED 174

Query: 181 EASPKLNISEL 186
           E + + N+S+L
Sbjct: 181 EETTQFNVSDL 174

[Close]

BLAST of Cp4.1LG03g06160 vs. ExPASy TrEMBL
Match: A0A6J1J5U6 (agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 PE=4 SV=1)

HSP 1 Score: 143 bits (361), Expect = 2.58e-36
Identity = 99/223 (44.39%), Postives = 133/223 (59.64%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVI------------- 60
           M RG LS  LI N KSR +TF++RK SLMKKAYELSTLCDV+TCV+I             
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 61  ASDEFQTWPSDRNQVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKV 120
           +S EF TWPS+R++VE MI +YK+ + C    +  +DL+ +FSDRK K+VTE  K R+KV
Sbjct: 61  SSVEFHTWPSNRSEVEHMIHAYKNGN-CNLQKRKCFDLSDYFSDRKRKLVTEMCKHREKV 120

Query: 121 QKSKDTNSDHCLDSLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLI--------EGA 180
            K    + D  LD LSE QL+  +  LDS+I  A  MI+FM+AD + L         E  
Sbjct: 121 GKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMIDFMDADNENLFGMFSCEEYENV 180

Query: 181 VEISSIDKQT--LSPLETEA-----SPKLNISELDMEANYDHL 195
           V++   D  T  LS +E E+     SP  N  E ++  N+++L
Sbjct: 181 VQMGG-DSSTPVLSLVELESTDSLNSPNPNPDEDEIGCNFENL 221

[Close]

BLAST of Cp4.1LG03g06160 vs. ExPASy TrEMBL
Match: A0A6J1F4C8 (agamous-like MADS-box protein AGL14 OS=Cucurbita moschata OX=3662 GN=LOC111442271 PE=4 SV=1)

HSP 1 Score: 142 bits (359), Expect = 4.77e-36
Identity = 92/204 (45.10%), Postives = 122/204 (59.80%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVI------------- 60
           M RG LS  LI N KSR +TF++RK SLMKKAYELSTLCDV+TCV+I             
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 61  ASDEFQTWPSDRNQVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKV 120
           +S EF TWPS+R++VE MI +YK+ + C    +  +DL+ +FSDRK K+VTE  K R+KV
Sbjct: 61  SSVEFHTWPSNRSEVEHMIHAYKNGN-CNFQKRKCFDLSDYFSDRKRKLVTEMCKHREKV 120

Query: 121 QKSKDTNSDHCLDSLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLI--------EGA 180
            K    + D  LD LSE QL+  +  LDS+I  A  M++FM+AD + L         E  
Sbjct: 121 GKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMVDFMDADNENLFGMFSCEEYENV 180

Query: 181 VEISSIDKQTLSPL-ETEASPKLN 182
           V++       + PL E E+   LN
Sbjct: 181 VQMGGDSSTPVPPLVELESPDSLN 203

[Close]

BLAST of Cp4.1LG03g06160 vs. ExPASy TrEMBL
Match: A0A6J1G795 (floral homeotic protein FBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111451466 PE=4 SV=1)

HSP 1 Score: 138 bits (348), Expect = 7.79e-34
Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVI----ASDE--FQT 60
           MGRG LS+KLISN KSR+TTF KRK SLM+KAYELSTLCDV+TCV++     SD+    T
Sbjct: 1   MGRGKLSMKLISNEKSRKTTFSKRKNSLMRKAYELSTLCDVRTCVIVHGPNQSDQSPIHT 60

Query: 61  WPSDRNQVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTN 120
           WPS R+ V  MI SYKS    K + KS ++L  FFSDRK KI ++ SKLR  V K++   
Sbjct: 61  WPSSRDSVNDMIASYKSNCLHKRTRKS-FNLFDFFSDRKKKIESDMSKLRKDVAKARYPK 120

Query: 121 SDHCLDSLSEHQLKVLLATLDSKIGVADSMIEFME 149
            D  L+ L E QL+VL+  +DSK+      IE +E
Sbjct: 121 WDERLEYLMEEQLRVLMIEIDSKLDATKRRIENVE 154

[Close]

BLAST of Cp4.1LG03g06160 vs. TAIR 10
Match: AT5G58890.1 (AGAMOUS-like 82 )

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-12
Identity = 52/147 (35.37%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 6   LSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVI-----ASD----EFQTWP 65
           + L+ I+N K+R TT++KRK SL KKA E STLC V+TC+++     A+D    E + WP
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIWP 65

Query: 66  SDRNQVEAMIRSYKSQSFCKHSAKSSYDLNQFFSD--RKNKIVTETSKLRDKVQKSKDTN 125
            D  +V A+IR YK       S +   ++  F +D  + N++VT+    R+    S +  
Sbjct: 66  KDETKVRAIIRKYKDT--VSTSCRKETNVETFVNDVGKGNEVVTKKRVKRENKYSSWEEK 125

Query: 126 SDHCLDSLSEHQLKVLLATLDSKIGVA 142
            D C    S  QL  +   +DSK+  A
Sbjct: 126 LDKC----SREQLHGIFCAVDSKLNEA 146

[Close]

BLAST of Cp4.1LG03g06160 vs. TAIR 10
Match: AT4G09960.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 69.7 bits (169), Expect = 6.3e-12
Identity = 53/206 (25.73%), Postives = 104/206 (50.49%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN 60
           MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  +++ S   + +    N
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLD 120
            + + I  YK       +  +  ++N  +  +      E++KLR ++Q  +++N +   D
Sbjct: 61  NIRSTIERYKKACSDSTNTSTVQEINAAYYQQ------ESAKLRQQIQTIQNSNRNLMGD 120

Query: 121 SLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLETEASPK 180
           SLS   +K  L  +++++  A S I      ++ L+   VEI +  K+ +         +
Sbjct: 121 SLSSLSVKE-LKQVENRLEKAISRIR--SKKHELLL---VEIENAQKREIELDNENIYLR 180

Query: 181 LNISELDMEANYDHLIGGDTEILSVD 207
             ++E++    + H +   +EI +++
Sbjct: 181 TKVAEVERYQQHHHQMVSGSEINAIE 194

[Close]

BLAST of Cp4.1LG03g06160 vs. TAIR 10
Match: AT4G09960.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 69.7 bits (169), Expect = 6.3e-12
Identity = 53/206 (25.73%), Postives = 104/206 (50.49%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN 60
           MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  +++ S   + +    N
Sbjct: 27  MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 86

Query: 61  QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLD 120
            + + I  YK       +  +  ++N  +  +      E++KLR ++Q  +++N +   D
Sbjct: 87  NIRSTIERYKKACSDSTNTSTVQEINAAYYQQ------ESAKLRQQIQTIQNSNRNLMGD 146

Query: 121 SLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLETEASPK 180
           SLS   +K  L  +++++  A S I      ++ L+   VEI +  K+ +         +
Sbjct: 147 SLSSLSVKE-LKQVENRLEKAISRIR--SKKHELLL---VEIENAQKREIELDNENIYLR 206

Query: 181 LNISELDMEANYDHLIGGDTEILSVD 207
             ++E++    + H +   +EI +++
Sbjct: 207 TKVAEVERYQQHHHQMVSGSEINAIE 220

[Close]

BLAST of Cp4.1LG03g06160 vs. TAIR 10
Match: AT4G09960.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 67.0 bits (162), Expect = 4.1e-11
Identity = 41/130 (31.54%), Postives = 70/130 (53.85%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN 60
           MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  +++ S   + +    N
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLD 120
            + + I  YK       +  +  ++N  +  +      E++KLR ++Q  +++N +   D
Sbjct: 61  NIRSTIERYKKACSDSTNTSTVQEINAAYYQQ------ESAKLRQQIQTIQNSNRNLMGD 120

Query: 121 SLSEHQLKVL 131
           SLS   +K L
Sbjct: 121 SLSSLSVKEL 124

[Close]

BLAST of Cp4.1LG03g06160 vs. TAIR 10
Match: AT4G09960.4 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 67.0 bits (162), Expect = 4.1e-11
Identity = 55/210 (26.19%), Postives = 107/210 (50.95%), Query Frame = 0


Query: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASDEFQTWPSDRN 60
           MGRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  +++ S   + +    N
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  QVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLD 120
            + + I  YK       +  +  ++N  +  +      E++KLR ++Q  +++N +   D
Sbjct: 61  NIRSTIERYKKACSDSTNTSTVQEINAAYYQQ------ESAKLRQQIQTIQNSNRNLMGD 120

Query: 121 SLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQ-TLSPLETEASP 180
           SLS   +K  L  +++++  A S I      ++ L+   VEI +  K+  L  +E +   
Sbjct: 121 SLSSLSVKE-LKQVENRLEKAISRIR--SKKHELLL---VEIENAQKRLILQEIELDNEN 180

Query: 181 ---KLNISELDMEANYDHLIGGDTEILSVD 207
              +  ++E++    + H +   +EI +++
Sbjct: 181 IYLRTKVAEVERYQQHHHQMVSGSEINAIE 198

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g06160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIM0	2.3e-11	35.37	Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=...	[more]
Q2QW53	3.0e-11	30.64	MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
F6I457	4.0e-11	29.76	Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=2 SV=...	[more]
A0A217EJJ0	4.0e-11	29.76	Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=3 SV=...	[more]
Q38836	8.8e-11	25.73	Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana OX=3702 GN=AGL11 PE=...	[more]

BLAST of Cp4.1LG03g06160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526169.1	3.61e-290	100.00	agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo]	[more]
XP_022934582.1	5.75e-258	84.72	agamous-like MADS-box protein AGL6 [Cucurbita moschata]	[more]
KAG7017922.1	5.18e-252	82.79	Agamous-like MADS-box protein AGL82, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6581182.1	5.21e-245	81.26	Agamous-like MADS-box protein AGL82, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_038887166.1	2.86e-96	49.20	MADS-box protein SVP-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG03g06160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F370	2.79e-258	84.72	agamous-like MADS-box protein AGL6 OS=Cucurbita moschata OX=3662 GN=LOC111441717...	[more]
A0A0A0LAL9	3.65e-56	60.21	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G258140 PE...	[more]
A0A6J1J5U6	2.58e-36	44.39	agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 ...	[more]
A0A6J1F4C8	4.77e-36	45.10	agamous-like MADS-box protein AGL14 OS=Cucurbita moschata OX=3662 GN=LOC11144227...	[more]
A0A6J1G795	7.79e-34	53.55	floral homeotic protein FBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111451466 ...	[more]

BLAST of Cp4.1LG03g06160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58890.1	1.6e-12	35.37	AGAMOUS-like 82	[more]
AT4G09960.1	6.3e-12	25.73	K-box region and MADS-box transcription factor family protein	[more]
AT4G09960.3	6.3e-12	25.73	K-box region and MADS-box transcription factor family protein	[more]
AT4G09960.2	4.1e-11	31.54	K-box region and MADS-box transcription factor family protein	[more]
AT4G09960.4	4.1e-11	26.19	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 20.66 coord: 23..38 score: 65.84 coord: 3..23 score: 40.72
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..57 e-value: 1.6E-18 score: 77.5
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..50 e-value: 1.8E-17 score: 62.6
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..50 score: 18.768501
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 14..95 e-value: 4.8E-18 score: 67.0
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..79
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 3..187
None	No IPR available	PANTHER	PTHR11945:SF176	AGAMOUS-LIKE MADS-BOX PROTEIN AGL82	coord: 3..187
IPR033897	MADS SRF-like	CDD	cd00266	MADS_SRF_like	coord: 2..82 e-value: 2.10964E-21 score: 85.7747

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g06160.1	Cp4.1LG03g06160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding