Cp4.1LG03g05260 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g05260
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ribosomal protein L19
Location	Cp4.1LG03: 4923819 .. 4926349 (+)
RNA-Seq Expression	Cp4.1LG03g05260
Synteny	Cp4.1LG03g05260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAATCAAAAACCCTAGCCTTAGGGCAAAAGCCGCACTAGTGTTCGTATATAAATATCGCAAGAATTAATCGCGCGATTCTCTGGGATTTCAGCAGCGCGAAGGAGGTTTAGAGAAATGGTTTCGCTCAAGCTTCAGAAGCGGCTTGCCGCTAGTGTTCTCAAGTGCGGCAGAGGCAAGGTCTGGCTGGATCCTAATGAAGTCAATGAAATCTCTATGGCGAATTCTCGTATGTTCCATTTTCTCTGTACTTTTCAGTATGAGCTTCGTATTTTGTTTGGTTCTTTTCTTATCGGGGACTTGTTGGGTTTTGAATTTGTGCGAATCTTCATCTAGTTCCAAAACATGTAGCATCTCAGTTAATCTCTCAATCCTCCTTCCCGACACTGCTTGTTTATTGAGTTGCTCTTGTTTGCTAGATATCGTAGGGAGTTTGTTGTTTAATTTGGTAAGTATCCATAAGCAGTTGGGTTGGGTTTTAATTTTGATCTGCTTGATTGGGATACGATTCGTTAACGAACATTCGGCTGAACTTTTTTGGTTTCATGAAATTATTTAATTCCCTACGCATTGTTTTTGCTATGTCTTTTTCAACTATATACTGCTTTTTGCTGGATGCGTAGTCTAAATCATTTAGTATGTGTGCTCGGTTTCTTTTTTGTATTTGTTGTTTTTGGTTAATTGAAGGGCGTTTGTTGGTTGCAGGTCAAAACGTTAGGAAGTTGGTGAAAGATGGGTTCATTATCAGGAAACCAACAAAGATTCACTCTCGTTCCCGTGCTCGCCGAATGAAGGAGGCTAAGAGGAAGGGACGTCACTCAGGATACGGTATTTTTCTTTTGAGTCCTGCTAGTTTGATTGGTGAAGAATACCCTTATATTTGTACAGAGTGACGGTCTTGCTTGCAGGACATGGAAACTATATTAAGTGATGTGGAAGCTCTAATTAGGATCCTTTTGTAGAGAAATTTAAGATAAGAAGTATAAAACTATATTTTAAGTGCTTTTCCAGCCTAAAGAACAAAGGCTATATAGTTATTAGATTTTACTCGATAAAGCATATGTAGTTGCGTAGGCAGATATGTACAATGGTATCAAGGTGAATGCTCTCCTTTGTCTATTTGATGAAGAATCGTCTGTCTTTCTGTATATTTGTCACTGTATTGCAGTTAAATGTTTTTTCTATGGGTAAATATGATTTATCATTTGATATTTCTATTAATTTTGTATATCATTTAGGAAACAGATTTCTAAGTTTACATAATAATAGTAGGGAATTAGATGTTATGGCATCTATGCATTTCTTGCCCATATTATATCATCATAATTATCATTGAATTTTCAAGTGAAGTGCTTTTATGGTCCTTTGTCACTAATTATGTATGTTGCACATAGGTAAGCGTAAGGGTACCAGGGAGGCTAGATTACCCACCAAGATTCTCTGGATGAGGAGGATGCGTGTCCTGAGGAGATTACTCCGCAAGTACAGGGAGTCCAAAAAGATTGACAAACACATGTACCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAACGTGTGCTTATGGAGNAAACGTGTGCTGATGGAGAGCATCCACAAATCAAAGGCTGAGAAGGCAAGAGAGAAGACTTTATCCGATCAATTTGAGGCAAAGAGAGCAAAGAACAAGGCTAGTAGGGAAAGAAAGTTTGCCAGAAGAGAGGAACGGTTAGCCCAGGTATTCAATCAATTCATCCTTGTAGTCCAAATTGTTTTTCAGTACGTATCATATTCTTGAATCTGCTTCTTCATTCATAAAGCTCCATGTCAGAATATTGACTTGGTCTTGTCGTTTAGGGTCCTGGAGAAAAACCAGCCGCCGCTGCCCCAGTTGCTGCGTCTCAACCCACTCAGTAAGTATTTAAGTCTTAATTTAATTTGAGATAATTAGATAGCTGATTTATATATAATAAACCAATCTTCTTGCTCTTGCAGGGTATCAAAAAAAGCAAAGAAGTGAACTTTTGATTTTTCGTAGATCCTCGACTACTGTACTGGTTTTGACCACTTTTGTTGTTTTTCTTGTCTTGGACAAATTTCCTTGTTATCAAAATCCCAGACGAATAGAGATTTACATTTATAATTTTTCTAATTTATCAATCGTTCCATCTTTTGGTTCTTTTTATTCTATAAATTGCTTGATTCTCACAAGCCTTGCTGGACCCTTTTTTTTTTACATATAAGTTGTTCCGTGTGAAAAATATCTGATGCCTGAATTGCATCCATTAAATACTTGGGACCTTTGAAATACTCCCCGAGCACTGCACGGCTCTTACTGCTCTTTATCCGTTGTTTTTGCTACTAGTTCTCGTCCAAACTGGCTTATTGAGCATGGTCTTCTATGATGGAAAGAACAAATGAATTGTTAAAATTGGGATCCCACGTGTATAATGTGGGTGTCTGAGGAAAATTTCTCTGCTCGTCATAGGTCCAACATTTTGATGATAAAAACCTGATTCGTTTTCCAGGTTTTGTCATTATT

mRNA sequence

AATAATCAAAAACCCTAGCCTTAGGGCAAAAGCCGCACTAGTGTTCGTATATAAATATCGCAAGAATTAATCGCGCGATTCTCTGGGATTTCAGCAGCGCGAAGGAGGTTTAGAGAAATGGTTTCGCTCAAGCTTCAGAAGCGGCTTGCCGCTAGTGTTCTCAAGTGCGGCAGAGGCAAGGTCTGGCTGGATCCTAATGAAGTCAATGAAATCTCTATGGCGAATTCTCGTCAAAACGTTAGGAAGTTGGTGAAAGATGGGTTCATTATCAGGAAACCAACAAAGATTCACTCTCGTTCCCGTGCTCGCCGAATGAAGGAGGCTAAGAGGAAGGGACGTCACTCAGGATACGGTAAGCGTAAGGGTACCAGGGAGGCTAGATTACCCACCAAGATTCTCTGGATGAGGAGGATGCGTGTCCTGAGGAGATTACTCCGCAAGTACAGGGAGTCCAAAAAGATTGACAAACACATGTACCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAACGTAGCATCCACAAATCAAAGGCTGAGAAGGCAAGAGAGAAGACTTTATCCGATCAATTTGAGGCAAAGAGAGCAAAGAACAAGGCTAGTAGGGAAAGAAAGTTTGCCAGAAGAGAGGAACGGTTAGCCCAGGGTCCTGGAGAAAAACCAGCCGCCGCTGCCCCAGTTGCTGCGTCTCAACCCACTCAGGTATCAAAAAAAGCAAAGAAGTGAACTTTTGATTTTTCGTAGATCCTCGACTACTGTACTGGTTTTGACCACTTTTGTTGTTTTTCTTGTCTTGGACAAATTTCCTTGTTATCAAAATCCCAGACGAATAGAGATTTACATTTATAATTTTTCTAATTTATCAATCGTTCCATCTTTTGGTTCTTTTTATTCTATAAATTGCTTGATTCTCACAAGCCTTGCTGGACCCTTTTTTTTTTACATATAAGTTGTTCCGTGTGAAAAATATCTGATGCCTGAATTGCATCCATTAAATACTTGGGACCTTTGAAATACTCCCCGAGCACTGCACGGCTCTTACTGCTCTTTATCCGTTGTTTTTGCTACTAGTTCTCGTCCAAACTGGCTTATTGAGCATGGTCTTCTATGATGGAAAGAACAAATGAATTGTTAAAATTGGGATCCCACGTGTATAATGTGGGTGTCTGAGGAAAATTTCTCTGCTCGTCATAGGTCCAACATTTTGATGATAAAAACCTGATTCGTTTTCCAGGTTTTGTCATTATT

Coding sequence (CDS)

ATGGTTTCGCTCAAGCTTCAGAAGCGGCTTGCCGCTAGTGTTCTCAAGTGCGGCAGAGGCAAGGTCTGGCTGGATCCTAATGAAGTCAATGAAATCTCTATGGCGAATTCTCGTCAAAACGTTAGGAAGTTGGTGAAAGATGGGTTCATTATCAGGAAACCAACAAAGATTCACTCTCGTTCCCGTGCTCGCCGAATGAAGGAGGCTAAGAGGAAGGGACGTCACTCAGGATACGGTAAGCGTAAGGGTACCAGGGAGGCTAGATTACCCACCAAGATTCTCTGGATGAGGAGGATGCGTGTCCTGAGGAGATTACTCCGCAAGTACAGGGAGTCCAAAAAGATTGACAAACACATGTACCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAACGTAGCATCCACAAATCAAAGGCTGAGAAGGCAAGAGAGAAGACTTTATCCGATCAATTTGAGGCAAAGAGAGCAAAGAACAAGGCTAGTAGGGAAAGAAAGTTTGCCAGAAGAGAGGAACGGTTAGCCCAGGGTCCTGGAGAAAAACCAGCCGCCGCTGCCCCAGTTGCTGCGTCTCAACCCACTCAGGTATCAAAAAAAGCAAAGAAGTGA

Protein sequence

MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRSIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAQGPGEKPAAAAPVAASQPTQVSKKAKK

Homology

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BLAST of Cp4.1LG03g05260 vs. ExPASy Swiss-Prot
Match: Q9SRX2 (60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.7e-84
Identity = 178/214 (83.18%), Postives = 190/214 (88.79%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG---EKPAAAAPVAASQPTQV--SKKAKK 206
           LA+GPG      AA AP A   PT     KK+KK
Sbjct: 181 LAKGPGGDVAPVAAPAPAATPAPTAAVPKKKSKK 214

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BLAST of Cp4.1LG03g05260 vs. ExPASy Swiss-Prot
Match: Q9LUQ6 (60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 3.8e-84
Identity = 173/209 (82.78%), Postives = 182/209 (87.08%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 206
           LAQGPG         A  QP    KK+KK
Sbjct: 181 LAQGPGGGETTTPAGAPQQPEVTKKKSKK 209

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BLAST of Cp4.1LG03g05260 vs. ExPASy Swiss-Prot
Match: P49693 (60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3)

HSP 1 Score: 310.5 bits (794), Expect = 1.5e-83
Identity = 175/208 (84.13%), Postives = 188/208 (90.38%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKPAAAAPVA--ASQPTQVSKK 203
           LA+GPG    AAAP A  A  P + SKK
Sbjct: 181 LAKGPGGDIPAAAPPAQTAEVPAKKSKK 208

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BLAST of Cp4.1LG03g05260 vs. ExPASy Swiss-Prot
Match: P36241 (60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2)

HSP 1 Score: 230.3 bits (586), Expect = 1.9e-59
Identity = 124/182 (68.13%), Postives = 149/182 (81.87%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           M SLKLQKRLAASVL+CG+ KVWLDPNE+NEI+  NSRQN+RKL+KDG II+KP  +HSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
            R R+  EA+RKGRH G+GKRKGT  AR+PTK+LWM+R RVLRRLL+KYR+SKKID+H+Y
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 179
           HD+YMK KGNVFKNKR     IHK KAEK R K L+DQ EA+R K + +R+    RREER
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARK----RREER 178

[Close]

BLAST of Cp4.1LG03g05260 vs. ExPASy Swiss-Prot
Match: Q3T0W9 (60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.7e-58
Identity = 122/181 (67.40%), Postives = 147/181 (81.22%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           M  L+LQKRLA+SVL+CG+ KVWLDPNE NEI+ ANSRQ +RKL+KDG IIRKP  +HSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           +R R+   A+RKGRH G GKRKGT  AR+P K+ WMRRMR+LRRLLR+YRESKKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 178
           H +Y+KVKGNVFKNKR     IHK KA+KAR+K L+DQ EA+R+K K +R+    RREER
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARK----RREER 177

[Close]

BLAST of Cp4.1LG03g05260 vs. NCBI nr
Match: XP_022934250.1 (60S ribosomal protein L19-1-like [Cucurbita moschata] >KAG6581284.1 60S ribosomal protein L19-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018007.1 60S ribosomal protein L19-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370 bits (951), Expect = 1.20e-128
Identity = 205/209 (98.09%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 205
           LAQGPGEKPAAAAPVAASQPTQVSKKAKK
Sbjct: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 209

[Close]

BLAST of Cp4.1LG03g05260 vs. NCBI nr
Match: XP_022984071.1 (60S ribosomal protein L19-1-like [Cucurbita maxima])

HSP 1 Score: 367 bits (942), Expect = 2.82e-127
Identity = 204/209 (97.61%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGR KVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRVKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 205
           LAQGPGEKPAAAAPVAASQPTQVSKKAKK
Sbjct: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 209

[Close]

BLAST of Cp4.1LG03g05260 vs. NCBI nr
Match: XP_042991636.1 (60S ribosomal protein L19-1 [Carya illinoinensis] >KAG2693389.1 hypothetical protein I3760_08G094300 [Carya illinoinensis] >KAG6645017.1 hypothetical protein CIPAW_08G092900 [Carya illinoinensis] >KAG6700077.1 hypothetical protein I3842_08G093700 [Carya illinoinensis] >KAG7967248.1 hypothetical protein I3843_08G090100 [Carya illinoinensis])

HSP 1 Score: 362 bits (928), Expect = 3.84e-125
Identity = 197/209 (94.26%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVW+DPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWIDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 205
           LAQGPGEKP AA PVAASQPTQ +KK+KK
Sbjct: 181 LAQGPGEKPVAAPPVAASQPTQAAKKSKK 209

[Close]

BLAST of Cp4.1LG03g05260 vs. NCBI nr
Match: XP_004152239.1 (60S ribosomal protein L19-1 [Cucumis sativus] >KGN52831.1 hypothetical protein Csa_014999 [Cucumis sativus])

HSP 1 Score: 361 bits (927), Expect = 5.45e-125
Identity = 200/209 (95.69%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 205
           LAQGPGEKPAAAAPVAASQ  QVSKKAKK
Sbjct: 181 LAQGPGEKPAAAAPVAASQAPQVSKKAKK 209

[Close]

BLAST of Cp4.1LG03g05260 vs. NCBI nr
Match: XP_018818006.1 (60S ribosomal protein L19-1 [Juglans regia] >KAF5462451.1 hypothetical protein F2P56_018456 [Juglans regia])

HSP 1 Score: 360 bits (925), Expect = 1.10e-124
Identity = 196/209 (93.78%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVW+DPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWIDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 205
           LAQGPGEKP AA PVAASQPTQ +KK+KK
Sbjct: 181 LAQGPGEKPVAAPPVAASQPTQAAKKSKK 209

[Close]

BLAST of Cp4.1LG03g05260 vs. ExPASy TrEMBL
Match: A0A6J1F757 (Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111441469 PE=3 SV=1)

HSP 1 Score: 370 bits (951), Expect = 5.80e-129
Identity = 205/209 (98.09%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 205
           LAQGPGEKPAAAAPVAASQPTQVSKKAKK
Sbjct: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 209

[Close]

BLAST of Cp4.1LG03g05260 vs. ExPASy TrEMBL
Match: A0A6J1J470 (Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111482492 PE=3 SV=1)

HSP 1 Score: 367 bits (942), Expect = 1.37e-127
Identity = 204/209 (97.61%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGR KVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRVKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 205
           LAQGPGEKPAAAAPVAASQPTQVSKKAKK
Sbjct: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 209

[Close]

BLAST of Cp4.1LG03g05260 vs. ExPASy TrEMBL
Match: A0A0A0KYA0 (Ribosomal protein L19 OS=Cucumis sativus OX=3659 GN=Csa_4G001980 PE=3 SV=1)

HSP 1 Score: 361 bits (927), Expect = 2.64e-125
Identity = 200/209 (95.69%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 205
           LAQGPGEKPAAAAPVAASQ  QVSKKAKK
Sbjct: 181 LAQGPGEKPAAAAPVAASQAPQVSKKAKK 209

[Close]

BLAST of Cp4.1LG03g05260 vs. ExPASy TrEMBL
Match: A0A2I4EF24 (Ribosomal protein L19 OS=Juglans regia OX=51240 GN=LOC108989019 PE=3 SV=1)

HSP 1 Score: 360 bits (925), Expect = 5.32e-125
Identity = 196/209 (93.78%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVW+DPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWIDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 205
           LAQGPGEKP AA PVAASQPTQ +KK+KK
Sbjct: 181 LAQGPGEKPVAAPPVAASQPTQAAKKSKK 209

[Close]

BLAST of Cp4.1LG03g05260 vs. ExPASy TrEMBL
Match: A0A1S3BYB1 (Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103494752 PE=3 SV=1)

HSP 1 Score: 360 bits (924), Expect = 7.56e-125
Identity = 199/209 (95.22%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 205
           LAQGPGEKPAAAAPVA+SQ  QVSKKAKK
Sbjct: 181 LAQGPGEKPAAAAPVASSQAPQVSKKAKK 209

[Close]

BLAST of Cp4.1LG03g05260 vs. TAIR 10
Match: AT1G02780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 313.5 bits (802), Expect = 1.2e-85
Identity = 178/214 (83.18%), Postives = 190/214 (88.79%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG---EKPAAAAPVAASQPTQV--SKKAKK 206
           LA+GPG      AA AP A   PT     KK+KK
Sbjct: 181 LAKGPGGDVAPVAAPAPAATPAPTAAVPKKKSKK 214

[Close]

BLAST of Cp4.1LG03g05260 vs. TAIR 10
Match: AT3G16780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 312.4 bits (799), Expect = 2.7e-85
Identity = 173/209 (82.78%), Postives = 182/209 (87.08%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 206
           LAQGPG         A  QP    KK+KK
Sbjct: 181 LAQGPGGGETTTPAGAPQQPEVTKKKSKK 209

[Close]

BLAST of Cp4.1LG03g05260 vs. TAIR 10
Match: AT4G02230.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 310.5 bits (794), Expect = 1.0e-84
Identity = 175/208 (84.13%), Postives = 188/208 (90.38%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKR----SIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKR    SIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKPAAAAPVA--ASQPTQVSKK 203
           LA+GPG    AAAP A  A  P + SKK
Sbjct: 181 LAKGPGGDIPAAAPPAQTAEVPAKKSKK 208

[Close]

BLAST of Cp4.1LG03g05260 vs. TAIR 10
Match: AT4G16030.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11
Identity = 61/133 (45.86%), Postives = 78/133 (58.65%), Query Frame = 0


Query: 58  HSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDK 117
           HSRSRAR      RK RH+GYG  K T EA         RR+++L+RLL+K+  +KKIDK
Sbjct: 7   HSRSRAR------RKCRHTGYG--KDTMEALRRIMKRLTRRLKMLKRLLKKFCWNKKIDK 66

Query: 118 HM-YHDMYMKVKGNVFKNKRSIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 177
            + YHDM+MKVKG V+KNK  + +S                    +K+SRERKF+  E R
Sbjct: 67  LVYYHDMFMKVKGKVYKNKCVLMES-------------------MHKSSRERKFSGSEMR 112

Query: 178 LAQGP-GEKPAAA 189
           LA  P GEK A+A
Sbjct: 127 LALEPEGEKTASA 112

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g05260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRX2	1.7e-84	83.18	60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1	[more]
Q9LUQ6	3.8e-84	82.78	60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1	[more]
P49693	1.5e-83	84.13	60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3	[more]
P36241	1.9e-59	68.13	60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2	[more]
Q3T0W9	4.7e-58	67.40	60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1	[more]

BLAST of Cp4.1LG03g05260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934250.1	1.20e-128	98.09	60S ribosomal protein L19-1-like [Cucurbita moschata] >KAG6581284.1 60S ribosoma...	[more]
XP_022984071.1	2.82e-127	97.61	60S ribosomal protein L19-1-like [Cucurbita maxima]	[more]
XP_042991636.1	3.84e-125	94.26	60S ribosomal protein L19-1 [Carya illinoinensis] >KAG2693389.1 hypothetical pro...	[more]
XP_004152239.1	5.45e-125	95.69	60S ribosomal protein L19-1 [Cucumis sativus] >KGN52831.1 hypothetical protein C...	[more]
XP_018818006.1	1.10e-124	93.78	60S ribosomal protein L19-1 [Juglans regia] >KAF5462451.1 hypothetical protein F...	[more]

BLAST of Cp4.1LG03g05260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F757	5.80e-129	98.09	Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111441469 PE=3 SV=1	[more]
A0A6J1J470	1.37e-127	97.61	Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111482492 PE=3 SV=1	[more]
A0A0A0KYA0	2.64e-125	95.69	Ribosomal protein L19 OS=Cucumis sativus OX=3659 GN=Csa_4G001980 PE=3 SV=1	[more]
A0A2I4EF24	5.32e-125	93.78	Ribosomal protein L19 OS=Juglans regia OX=51240 GN=LOC108989019 PE=3 SV=1	[more]
A0A1S3BYB1	7.56e-125	95.22	Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103494752 PE=3 SV=1	[more]

BLAST of Cp4.1LG03g05260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02780.1	1.2e-85	83.18	Ribosomal protein L19e family protein	[more]
AT3G16780.1	2.7e-85	82.78	Ribosomal protein L19e family protein	[more]
AT4G02230.1	1.0e-84	84.13	Ribosomal protein L19e family protein	[more]
AT4G16030.1	2.6e-11	45.86	Ribosomal protein L19e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000196	Ribosomal protein L19/L19e	SMART	SM01416	Ribosomal_L19e_2	coord: 3..142 e-value: 1.7E-89 score: 313.3
IPR000196	Ribosomal protein L19/L19e	PFAM	PF01280	Ribosomal_L19e	coord: 4..141 e-value: 1.9E-61 score: 206.3
IPR000196	Ribosomal protein L19/L19e	HAMAP	MF_01475	Ribosomal_L19e	coord: 3..149 score: 20.404024
IPR015972	Ribosomal protein L19/L19e, domain 1	GENE3D	1.10.1650.10		coord: 2..56 e-value: 2.1E-31 score: 109.5
None	No IPR available	GENE3D	1.10.1200.240		coord: 57..184 e-value: 5.1E-53 score: 180.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..180
None	No IPR available	PANTHER	PTHR10722:SF26	RIBOSOMAL PROTEIN L19	coord: 1..205
IPR039547	60S ribosomal protein L19	PANTHER	PTHR10722	60S RIBOSOMAL PROTEIN L19	coord: 1..205
IPR023638	Ribosomal protein L19/L19e conserved site	PROSITE	PS00526	RIBOSOMAL_L19E	coord: 7..26
IPR033935	Ribosomal protein L19, eukaryotic	CDD	cd01417	Ribosomal_L19e_E	coord: 4..163 e-value: 2.12556E-71 score: 212.21
IPR035970	Ribosomal protein L19/L19e superfamily	SUPERFAMILY	48140	Ribosomal protein L19 (L19e)	coord: 3..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g05260.1	Cp4.1LG03g05260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome