Cp4.1LG02g16320 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g16320
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	GATA zinc finger domain-containing protein 8-like
Location	Cp4.1LG02: 12932542 .. 12933174 (-)
RNA-Seq Expression	Cp4.1LG02g16320
Synteny	Cp4.1LG02g16320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACAACCTCATTTCTCTAGAATCTTCCATTACCGACGACAACAAGAACAACAACAACAACCTAGTCGGTAACAATGACAACAATGGCAACAATGGTGTCGCCGCTCCTAAGAACACGACGACGAAGAAGAAGAACAAGAGCCTTAACATTCTCAGGGTGGCTTTGATGCTCCTCCGCCGCCGCTCCAGCAAGCCCAATGCTGCTTCTGTTGAGGTTGCCTCTAAGGGCATGTGGAACCGCCTTGTCGCCTCCATCCGCCCTTTACATGTCCAAAGCAATCACTCACCTCAACATCCTCAACCCATTATTGTTCCCTCCATGCCCGACGCCACGTTACGTGCCTCGCCCTCCATCGACTGCTTCGAGGATGTTAAGTCGTCCTCCGCTTCTTCCGTTGATGGCATGAGCCGATACGCTTCCGCTATCAATCTCCAAGAGTTCGACCAAAACAATGATGACAACAACGAGAACGATAATCAAGTCGAGCCAAAAATGGACGAGGATGATAATGTCGATGATATGATCGATGCAAAAGCAGAAATGTTCATAGCTCGATTCTACGAACAAATGAGGCGCTCCAACTCCGACGTTCGTTACCGAGAGATGATTAAGAGATCGATCGGCTAA

mRNA sequence

ATGGCAGACAACCTCATTTCTCTAGAATCTTCCATTACCGACGACAACAAGAACAACAACAACAACCTAGTCGGTAACAATGACAACAATGGCAACAATGGTGTCGCCGCTCCTAAGAACACGACGACGAAGAAGAAGAACAAGAGCCTTAACATTCTCAGGGTGGCTTTGATGCTCCTCCGCCGCCGCTCCAGCAAGCCCAATGCTGCTTCTGTTGAGGTTGCCTCTAAGGGCATGTGGAACCGCCTTGTCGCCTCCATCCGCCCTTTACATGTCCAAAGCAATCACTCACCTCAACATCCTCAACCCATTATTGTTCCCTCCATGCCCGACGCCACGTTACGTGCCTCGCCCTCCATCGACTGCTTCGAGGATGTTAAGTCGTCCTCCGCTTCTTCCGTTGATGGCATGAGCCGATACGCTTCCGCTATCAATCTCCAAGAGTTCGACCAAAACAATGATGACAACAACGAGAACGATAATCAAGTCGAGCCAAAAATGGACGAGGATGATAATGTCGATGATATGATCGATGCAAAAGCAGAAATGTTCATAGCTCGATTCTACGAACAAATGAGGCGCTCCAACTCCGACGTTCGTTACCGAGAGATGATTAAGAGATCGATCGGCTAA

Coding sequence (CDS)

ATGGCAGACAACCTCATTTCTCTAGAATCTTCCATTACCGACGACAACAAGAACAACAACAACAACCTAGTCGGTAACAATGACAACAATGGCAACAATGGTGTCGCCGCTCCTAAGAACACGACGACGAAGAAGAAGAACAAGAGCCTTAACATTCTCAGGGTGGCTTTGATGCTCCTCCGCCGCCGCTCCAGCAAGCCCAATGCTGCTTCTGTTGAGGTTGCCTCTAAGGGCATGTGGAACCGCCTTGTCGCCTCCATCCGCCCTTTACATGTCCAAAGCAATCACTCACCTCAACATCCTCAACCCATTATTGTTCCCTCCATGCCCGACGCCACGTTACGTGCCTCGCCCTCCATCGACTGCTTCGAGGATGTTAAGTCGTCCTCCGCTTCTTCCGTTGATGGCATGAGCCGATACGCTTCCGCTATCAATCTCCAAGAGTTCGACCAAAACAATGATGACAACAACGAGAACGATAATCAAGTCGAGCCAAAAATGGACGAGGATGATAATGTCGATGATATGATCGATGCAAAAGCAGAAATGTTCATAGCTCGATTCTACGAACAAATGAGGCGCTCCAACTCCGACGTTCGTTACCGAGAGATGATTAAGAGATCGATCGGCTAA

Protein sequence

MADNLISLESSITDDNKNNNNNLVGNNDNNGNNGVAAPKNTTTKKKNKSLNILRVALMLLRRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDATLRASPSIDCFEDVKSSSASSVDGMSRYASAINLQEFDQNNDDNNENDNQVEPKMDEDDNVDDMIDAKAEMFIARFYEQMRRSNSDVRYREMIKRSIG

Homology

[Close]

BLAST of Cp4.1LG02g16320 vs. NCBI nr
Match: XP_023524600.1 (GATA zinc finger domain-containing protein 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385 bits (990), Expect = 1.73e-134
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MADNLISLESSITDDNKNNNNNLVGNNDNNGNNGVAAPKNTTTKKKNKSLNILRVALMLL 60
           MADNLISLESSITDDNKNNNNNLVGNNDNNGNNGVAAPKNTTTKKKNKSLNILRVALMLL
Sbjct: 1   MADNLISLESSITDDNKNNNNNLVGNNDNNGNNGVAAPKNTTTKKKNKSLNILRVALMLL 60

Query: 61  RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDATLRASPSI 120
           RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDATLRASPSI
Sbjct: 61  RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDATLRASPSI 120

Query: 121 DCFEDVKSSSASSVDGMSRYASAINLQEFDQNNDDNNENDNQVEPKMDEDDNVDDMIDAK 180
           DCFEDVKSSSASSVDGMSRYASAINLQEFDQNNDDNNENDNQVEPKMDEDDNVDDMIDAK
Sbjct: 121 DCFEDVKSSSASSVDGMSRYASAINLQEFDQNNDDNNENDNQVEPKMDEDDNVDDMIDAK 180

Query: 181 AEMFIARFYEQMRRSNSDVRYREMIKRSIG 210
           AEMFIARFYEQMRRSNSDVRYREMIKRSIG
Sbjct: 181 AEMFIARFYEQMRRSNSDVRYREMIKRSIG 210

[Close]

BLAST of Cp4.1LG02g16320 vs. NCBI nr
Match: XP_022998628.1 (uncharacterized protein LOC111493213 [Cucurbita maxima])

HSP 1 Score: 339 bits (869), Expect = 3.98e-116
Identity = 191/210 (90.95%), Postives = 198/210 (94.29%), Query Frame = 0


Query: 1   MADNLISLESSITDDNKNNNNNLVGNNDNNGNNGVAAPKNTTTKKKNKSLNILRVALMLL 60
           MADNLISLESSITDDN N NNNLVGNN   GNNGVA PKNTTTKK NKSLNILRVALMLL
Sbjct: 1   MADNLISLESSITDDN-NKNNNLVGNN---GNNGVAPPKNTTTKK-NKSLNILRVALMLL 60

Query: 61  RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDATLRASPSI 120
           RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPS PDATLR SPSI
Sbjct: 61  RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSFPDATLRTSPSI 120

Query: 121 DCFEDVKSSSASSVDGMSRYASAINLQEFDQNNDDNNENDNQVEPKMDEDDNVDDMIDAK 180
           DCFEDVKSSSASSVDGMSRYASAINLQE DQNN+D+N+NDN+ EPKMDED+N DDMIDAK
Sbjct: 121 DCFEDVKSSSASSVDGMSRYASAINLQELDQNNEDDNDNDNEAEPKMDEDENADDMIDAK 180

Query: 181 AEMFIARFYEQMRRSNSDVRYREMIKRSIG 210
           AEMFIA+FYEQ+RRSNSDVRYREMIKRSIG
Sbjct: 181 AEMFIAQFYEQIRRSNSDVRYREMIKRSIG 205

[Close]

BLAST of Cp4.1LG02g16320 vs. NCBI nr
Match: XP_022949039.1 (GATA zinc finger domain-containing protein 8-like [Cucurbita moschata])

HSP 1 Score: 332 bits (852), Expect = 1.85e-113
Identity = 192/213 (90.14%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MADNLISLESSITDDNKNNNNNLVGNNDNNGNNGVAAPKNTTTKKKNKSLNILRVALMLL 60
           MADNL SL+SSITDDN  NNNNLVGNN   GNNGVA PKNTT KKKNKSLNILRVALMLL
Sbjct: 1   MADNLKSLQSSITDDNNKNNNNLVGNN---GNNGVAPPKNTT-KKKNKSLNILRVALMLL 60

Query: 61  RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDAT-LRASPS 120
           RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDAT LRASPS
Sbjct: 61  RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDATTLRASPS 120

Query: 121 IDCFEDVKSSSASSVDGMSRYASAINLQEFDQNNDD---NNENDNQVEPKMDEDDNVDDM 180
           IDCFEDVKSSSASSVDGMSRYASAINLQE DQNNDD   NN+NDNQ EPK+DED+N DDM
Sbjct: 121 IDCFEDVKSSSASSVDGMSRYASAINLQELDQNNDDDDDNNDNDNQAEPKIDEDENADDM 180

Query: 181 IDAKAEMFIARFYEQMRRSNSDVRYREMIKRSI 209
           IDAKAEMFIA+FYEQMRRSNSDVRY EMIKRSI
Sbjct: 181 IDAKAEMFIAQFYEQMRRSNSDVRYLEMIKRSI 209

[Close]

BLAST of Cp4.1LG02g16320 vs. NCBI nr
Match: KAG6606945.1 (hypothetical protein SDJN03_00287, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332 bits (852), Expect = 2.36e-113
Identity = 194/217 (89.40%), Postives = 201/217 (92.63%), Query Frame = 0


Query: 1   MADNLISLESSITDDNKN-NNNNLVGNNDNNGNNG---VAAPKNTTTKKKNKSLNILRVA 60
           MADNL SL+SS+TDD+ N NNNNLVGNNDNNGNNG   VA PKNTT KKKNKSLNILRVA
Sbjct: 1   MADNLNSLKSSVTDDDNNKNNNNLVGNNDNNGNNGNNGVAPPKNTT-KKKNKSLNILRVA 60

Query: 61  LMLLRRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDAT-LR 120
           LMLLRRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDAT LR
Sbjct: 61  LMLLRRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDATTLR 120

Query: 121 ASPSIDCFEDVKSSSASSVDGMSRYASAINLQEFDQNNDD---NNENDNQVEPKMDEDDN 180
           ASPSIDCFEDVKSSSASSVDGMSRYASAINLQE DQNNDD   NN+NDNQ EPK+DED+N
Sbjct: 121 ASPSIDCFEDVKSSSASSVDGMSRYASAINLQELDQNNDDDDDNNDNDNQAEPKIDEDEN 180

Query: 181 VDDMIDAKAEMFIARFYEQMRRSNSDVRYREMIKRSI 209
            DDMIDAKAEMFIA+FYEQMRRSNSDVRY EMIKRSI
Sbjct: 181 ADDMIDAKAEMFIAQFYEQMRRSNSDVRYLEMIKRSI 216

[Close]

BLAST of Cp4.1LG02g16320 vs. NCBI nr
Match: XP_004152232.2 (uncharacterized protein LOC101222123 [Cucumis sativus] >KGN52840.1 hypothetical protein Csa_015370 [Cucumis sativus])

HSP 1 Score: 160 bits (404), Expect = 2.39e-45
Identity = 110/183 (60.11%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 44  KKKNKSLNILRVALMLLRRRSSKPN-----AASVE-VASKGMWNRLVASIRPLHVQSNHS 103
           KKK KS NIL+VALMLLR+RS KPN     +A V+ V SKGMWNRLV ++RPLH+QS+ S
Sbjct: 43  KKKKKSTNILKVALMLLRQRSRKPNVVVNNSAIVDHVGSKGMWNRLVGAMRPLHLQSDES 102

Query: 104 PQHPQPIIVPSMPDAT-------LRASPSIDCFEDVKSSSASSVDGMSRYASAINLQEFD 163
                   VPS+P A+       L +SPS+D FEDV SSS SSVDGMSRYASA NLQ+ D
Sbjct: 103 ------TTVPSLPAASTEPPLPRLPSSPSLDNFEDVNSSS-SSVDGMSRYASAANLQDLD 162

Query: 164 QNNDDNNE-NDNQVEPKMDEDDNVDDMIDAKAEMFIARFYEQMR--RSNSDVRYREMIKR 210
           QN+ ++ E N+++V   +D +D  D+MIDAKAEMFIA+FYEQM+  RS SD+RY EMIKR
Sbjct: 163 QNDGEDEEINNDKVSSNVDGEDE-DEMIDAKAEMFIAQFYEQMKLQRSESDIRYNEMIKR 217

[Close]

BLAST of Cp4.1LG02g16320 vs. ExPASy TrEMBL
Match: A0A6J1KHA3 (uncharacterized protein LOC111493213 OS=Cucurbita maxima OX=3661 GN=LOC111493213 PE=4 SV=1)

HSP 1 Score: 339 bits (869), Expect = 1.93e-116
Identity = 191/210 (90.95%), Postives = 198/210 (94.29%), Query Frame = 0


Query: 1   MADNLISLESSITDDNKNNNNNLVGNNDNNGNNGVAAPKNTTTKKKNKSLNILRVALMLL 60
           MADNLISLESSITDDN N NNNLVGNN   GNNGVA PKNTTTKK NKSLNILRVALMLL
Sbjct: 1   MADNLISLESSITDDN-NKNNNLVGNN---GNNGVAPPKNTTTKK-NKSLNILRVALMLL 60

Query: 61  RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDATLRASPSI 120
           RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPS PDATLR SPSI
Sbjct: 61  RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSFPDATLRTSPSI 120

Query: 121 DCFEDVKSSSASSVDGMSRYASAINLQEFDQNNDDNNENDNQVEPKMDEDDNVDDMIDAK 180
           DCFEDVKSSSASSVDGMSRYASAINLQE DQNN+D+N+NDN+ EPKMDED+N DDMIDAK
Sbjct: 121 DCFEDVKSSSASSVDGMSRYASAINLQELDQNNEDDNDNDNEAEPKMDEDENADDMIDAK 180

Query: 181 AEMFIARFYEQMRRSNSDVRYREMIKRSIG 210
           AEMFIA+FYEQ+RRSNSDVRYREMIKRSIG
Sbjct: 181 AEMFIAQFYEQIRRSNSDVRYREMIKRSIG 205

[Close]

BLAST of Cp4.1LG02g16320 vs. ExPASy TrEMBL
Match: A0A6J1GBN8 (GATA zinc finger domain-containing protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111452503 PE=4 SV=1)

HSP 1 Score: 332 bits (852), Expect = 8.93e-114
Identity = 192/213 (90.14%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MADNLISLESSITDDNKNNNNNLVGNNDNNGNNGVAAPKNTTTKKKNKSLNILRVALMLL 60
           MADNL SL+SSITDDN  NNNNLVGNN   GNNGVA PKNTT KKKNKSLNILRVALMLL
Sbjct: 1   MADNLKSLQSSITDDNNKNNNNLVGNN---GNNGVAPPKNTT-KKKNKSLNILRVALMLL 60

Query: 61  RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDAT-LRASPS 120
           RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDAT LRASPS
Sbjct: 61  RRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQPIIVPSMPDATTLRASPS 120

Query: 121 IDCFEDVKSSSASSVDGMSRYASAINLQEFDQNNDD---NNENDNQVEPKMDEDDNVDDM 180
           IDCFEDVKSSSASSVDGMSRYASAINLQE DQNNDD   NN+NDNQ EPK+DED+N DDM
Sbjct: 121 IDCFEDVKSSSASSVDGMSRYASAINLQELDQNNDDDDDNNDNDNQAEPKIDEDENADDM 180

Query: 181 IDAKAEMFIARFYEQMRRSNSDVRYREMIKRSI 209
           IDAKAEMFIA+FYEQMRRSNSDVRY EMIKRSI
Sbjct: 181 IDAKAEMFIAQFYEQMRRSNSDVRYLEMIKRSI 209

[Close]

BLAST of Cp4.1LG02g16320 vs. ExPASy TrEMBL
Match: A0A0A0KT88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002570 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 1.16e-45
Identity = 110/183 (60.11%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 44  KKKNKSLNILRVALMLLRRRSSKPN-----AASVE-VASKGMWNRLVASIRPLHVQSNHS 103
           KKK KS NIL+VALMLLR+RS KPN     +A V+ V SKGMWNRLV ++RPLH+QS+ S
Sbjct: 43  KKKKKSTNILKVALMLLRQRSRKPNVVVNNSAIVDHVGSKGMWNRLVGAMRPLHLQSDES 102

Query: 104 PQHPQPIIVPSMPDAT-------LRASPSIDCFEDVKSSSASSVDGMSRYASAINLQEFD 163
                   VPS+P A+       L +SPS+D FEDV SSS SSVDGMSRYASA NLQ+ D
Sbjct: 103 ------TTVPSLPAASTEPPLPRLPSSPSLDNFEDVNSSS-SSVDGMSRYASAANLQDLD 162

Query: 164 QNNDDNNE-NDNQVEPKMDEDDNVDDMIDAKAEMFIARFYEQMR--RSNSDVRYREMIKR 210
           QN+ ++ E N+++V   +D +D  D+MIDAKAEMFIA+FYEQM+  RS SD+RY EMIKR
Sbjct: 163 QNDGEDEEINNDKVSSNVDGEDE-DEMIDAKAEMFIAQFYEQMKLQRSESDIRYNEMIKR 217

[Close]

BLAST of Cp4.1LG02g16320 vs. ExPASy TrEMBL
Match: A0A5A7TSQ6 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001350 PE=4 SV=1)

HSP 1 Score: 159 bits (402), Expect = 2.53e-45
Identity = 103/182 (56.59%), Postives = 129/182 (70.88%), Query Frame = 0


Query: 44  KKKNKSLNILRVALMLLRRRSSKPNA----ASVEVASKGMWNRLVASIRPLHVQSNHSPQ 103
           KKK +S NIL+VAL LLR+RS KPN     A+++V SKGMWNRLV ++RPLH+QS+ S  
Sbjct: 48  KKKKRSTNILKVALKLLRQRSRKPNVTNVPAAIDVGSKGMWNRLVGAMRPLHLQSDES-- 107

Query: 104 HPQPIIVPSMPDAT--------LRASPSIDCFEDVKSSSASSVDGMSRYASAINLQEFDQ 163
                 +PS+P +T          +SPS+D FEDV SSS+SSVDGMSRYAS  NLQ  DQ
Sbjct: 108 ----TTIPSLPTSTDPHPPPPLFPSSPSVDNFEDVNSSSSSSVDGMSRYASVDNLQALDQ 167

Query: 164 NNDDNNE-NDNQVEPKMDEDDNVDDMIDAKAEMFIARFYEQMR--RSNSDVRYREMIKRS 210
           N+++  E N+++    MD     D+MIDAKAEMFIA+FYEQ++  RS SDVRY EMIKRS
Sbjct: 168 NDEEEEERNNDKFYANMD---GEDEMIDAKAEMFIAQFYEQIKLQRSESDVRYNEMIKRS 220

[Close]

BLAST of Cp4.1LG02g16320 vs. ExPASy TrEMBL
Match: A0A1S4DZU7 (uncharacterized protein LOC103494745 OS=Cucumis melo OX=3656 GN=LOC103494745 PE=4 SV=1)

HSP 1 Score: 159 bits (402), Expect = 2.53e-45
Identity = 103/182 (56.59%), Postives = 129/182 (70.88%), Query Frame = 0


Query: 44  KKKNKSLNILRVALMLLRRRSSKPNA----ASVEVASKGMWNRLVASIRPLHVQSNHSPQ 103
           KKK +S NIL+VAL LLR+RS KPN     A+++V SKGMWNRLV ++RPLH+QS+ S  
Sbjct: 48  KKKKRSTNILKVALKLLRQRSRKPNVTNVPAAIDVGSKGMWNRLVGAMRPLHLQSDES-- 107

Query: 104 HPQPIIVPSMPDAT--------LRASPSIDCFEDVKSSSASSVDGMSRYASAINLQEFDQ 163
                 +PS+P +T          +SPS+D FEDV SSS+SSVDGMSRYAS  NLQ  DQ
Sbjct: 108 ----TTIPSLPTSTDPHPPPPLFPSSPSVDNFEDVNSSSSSSVDGMSRYASVDNLQALDQ 167

Query: 164 NNDDNNE-NDNQVEPKMDEDDNVDDMIDAKAEMFIARFYEQMR--RSNSDVRYREMIKRS 210
           N+++  E N+++    MD     D+MIDAKAEMFIA+FYEQ++  RS SDVRY EMIKRS
Sbjct: 168 NDEEEEERNNDKFYANMD---GEDEMIDAKAEMFIAQFYEQIKLQRSESDVRYNEMIKRS 220

[Close]

BLAST of Cp4.1LG02g16320 vs. TAIR 10
Match: AT4G02160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61710.1); Has 35 Blast hits to 35 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 3.3e-09
Identity = 62/178 (34.83%), Postives = 91/178 (51.12%), Query Frame = 0


Query: 29  NNGNNGVAAPKNTTTKKKNKSLNILRVAL-MLLRRRSSKPNAASVEVASKGMWNRLVASI 88
           N  N G    KN   KK+++  +++ V L ML RRR SKP        + G W R+V S 
Sbjct: 5   NQINGGQEEIKNMKKKKRSRGFHVIGVVLYMLRRRRRSKP-------LNNGFWRRVVESF 64

Query: 89  RPLHVQSNHSPQHPQ----PIIVPSMPDATLRASPSID-----CFEDVKSSSASSVDGMS 148
             L  ++++    P      I+ PS    T     S D       E + ++S+S   G+S
Sbjct: 65  GQL--KNDNVTVLPSSSNITILPPSSSPVTDEVPASSDDQVSEMVEVLTATSSSCSSGIS 124

Query: 149 RYASAINLQEFDQNNDDNNENDNQVEPKMDEDDNVDDMIDAKAEMFIARFYEQMRRSN 197
            Y SA +L++ D  ++D+++++N        DD  D+MIDAKAE FI RFYEQMR  N
Sbjct: 125 GYGSAKSLRDMDCLDEDDDDDEN-----YGNDDGGDEMIDAKAEEFIVRFYEQMRMQN 168

[Close]

BLAST of Cp4.1LG02g16320 vs. TAIR 10
Match: AT5G61710.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 2.2e-05
Identity = 47/159 (29.56%), Postives = 75/159 (47.17%), Query Frame = 0


Query: 44  KKKNKSLNILRVALMLLRRRSSKPNAASVEVASKGMWNRLVASIRPLHVQSNHSPQHPQP 103
           KK ++ +++  V + +LRRR           ++   W R+V S+R +  +    P     
Sbjct: 6   KKSSRGMHMFSVVMFMLRRR---------RTSNTRFWRRVVESVRKVRSEITIMP----- 65

Query: 104 IIVPSM------PDATLRASPSIDCFEDVKSSSASSVDGMSRYASAINLQEFDQNNDDNN 163
             V  M       +   R S +++ F    SSS+S   G+S Y SA++L++ D   DD+ 
Sbjct: 66  --VTEMGGDDGDNEVDDRLSETMEVFTAPSSSSSS---GISGYGSAMSLRDLDYPYDDD- 125

Query: 164 ENDNQVEPKMDEDDNVDDMIDAKAEMFIARFYEQMRRSN 197
                ++    +    DDMID KAE FI RFY QM+  N
Sbjct: 126 -----IDECYSDVQGGDDMIDEKAEEFIVRFYAQMKMQN 139

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g16320 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g16320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524600.1	1.73e-134	100.00	GATA zinc finger domain-containing protein 8-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998628.1	3.98e-116	90.95	uncharacterized protein LOC111493213 [Cucurbita maxima]	[more]
XP_022949039.1	1.85e-113	90.14	GATA zinc finger domain-containing protein 8-like [Cucurbita moschata]	[more]
KAG6606945.1	2.36e-113	89.40	hypothetical protein SDJN03_00287, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004152232.2	2.39e-45	60.11	uncharacterized protein LOC101222123 [Cucumis sativus] >KGN52840.1 hypothetical ...	[more]

BLAST of Cp4.1LG02g16320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KHA3	1.93e-116	90.95	uncharacterized protein LOC111493213 OS=Cucurbita maxima OX=3661 GN=LOC111493213...	[more]
A0A6J1GBN8	8.93e-114	90.14	GATA zinc finger domain-containing protein 8-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A0A0KT88	1.16e-45	60.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002570 PE=4 SV=1	[more]
A0A5A7TSQ6	2.53e-45	56.59	DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S4DZU7	2.53e-45	56.59	uncharacterized protein LOC103494745 OS=Cucumis melo OX=3656 GN=LOC103494745 PE=...	[more]

BLAST of Cp4.1LG02g16320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02160.1	3.3e-09	34.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G61710.1	2.2e-05	29.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 174..207 e-value: 4.6E-9 score: 35.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR36378:SF1	COTTON FIBER PROTEIN	coord: 20..204
None	No IPR available	PANTHER	PTHR36378	COTTON FIBER PROTEIN	coord: 20..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g16320.1	Cp4.1LG02g16320.1	mRNA