Cp4.1LG01g22550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g22550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein SPIRAL1-like 3
Location	Cp4.1LG01: 20175906 .. 20178909 (+)
RNA-Seq Expression	Cp4.1LG01g22550
Synteny	Cp4.1LG01g22550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGAACAATAATAATAAGATTTGAAAATTTGAAAATAATATTTAATAGCATCTCAGGTTCTCTGGTTGTGGCCTGTGTTGCGAAGGTGCTCTGCTGTCTTCCATCGTCTGCCTCCTTATCTCTTCCTTTTGATCCCATTTTCATTCACAGAACATTTTCGAGGTACCCGCTTTAAATCTTTACCTTCTCATTTCAGATCCACGTTTCTTTAAGGTTTTGTTCGCCGATCTGATCATTTGTTGCTATTTTCCCGCACTCCATTTCCGTCTTTGTACGTACTCTCGTGATATACTTGATTCACTGTCTACATTGTTTTCGTTTACCAATTTGATTTATGTTCTTTGATCTTTGATGAGGTTGAATTGAAATGTGATCCTTGTTTTGGTTTTGAATCGATTGAAATGTTGAAATGTTTGTTGCTGGATGCTGTGTGAGCTCAAAATTATAGCACGCTTGTTTGTAGTGGATCTGTAAGAAGAAGACTGGGAATATTTGAAGCATGATATGAATCATGCATAGAAATGAAGAATTCATACCATGTGGTTCGCAGTTTGCTAAGTGTTATAGTAAATGATGTAGGTATTAGTTTATTGTCAGCTGATTAATAAAGTTGCCAATTCACCTCAAACAGAACTGCGAAAGTAAAAATATCCATATTCTTTCGTAAACATTTCAAAAGTACTGAAATCTTTTAAAATATTGGACAAAAATCGATGTAACAATGACTAAGACGCTTGCCTAAATTAAGTTTGCATTAAGAAACATTGACTTTTCGTCCAATATTCTAATAGTTGTTCTATTTCAATCGTAGTTTTTTAAACATGGTCAAAGTAACATTGCAACTTTGGAAAGAATAGACATTTTTTAAACAAAAGACGGTACTTTTTATAATTTAGCCATTTTTGAATTGAGAACTTGCTGCTTATGAAGATGTGCAATAGATTTTTTTCATCTAGTTTTGTTCATCAGTGGTTGTAGCTTTGTACCTTCTTCTTTTATTCATTGAAATACTATTAATAATGTAGAGCCGGCTTGGTAGACGTCAACAAGGGCCAAATGGTCATCGTAGCTCTTTACCCTGATATTTTATTAACTAAATTTCAGAATTGGGTTGATAGTCTTCAACAAGAGCCTTTGGATCACGATTTTGTGCTTAAACAAGCAAAAGCATTTTATATATACTGTTGCTGTATATGCCAAATGTATGATATTGGCAATTTATGCCTATAACTTTATTTCCCTCTGACTTCTCTGGATGTTATTTCCTTTATGGTATGCCCCCTTTTTCTCTTTATATAGTCTAATAGTTAAATGTGTTATCACTATAATTACATCTGGGTCTTATGTTGTTGTGTTAACAGGAGAAACAAAAGGCTTGAAAATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGTTCCTTGGGCTACCTGTTTGGAGGTGGGGAGCCGGCCAACAATGTGCAAGCTTCTAAGAAACCCAATGGATCTTCTCAGCCTACCTCTTCTACTTCACAACCTGCTGATAAACACATACCTGCTGGCATTCCGGGGAATCATACTAACAATTACCATAGAGCAGATGGACAGAACTGTGGCAACTTTATCACGGTAGGCTCTTTGTTTTCTTGTTGGATTGAAATGTTTTGTGCTGATAGTTATTCACCAACTATCCTGACCTTCCACTGTCATAGTTATAACACCATAACTGTAACAGTCAAAGCCAAAAGCCCACCGTTAGTAGATATTGTCCTCTTTGGACTTTCCCTTTCAGCCCCTCAAGATTTTTAAAACGTGTCCGAGAGGTTTGCACACCCTTATAAATAATAGTTTGTTCCCCTCTTCCATACTTGGACAAGTCTTTTTCCCTTTGACCTTACTAATTGGTTAACTGTGTTTAAAAAATGTTTAAGTTGGTACAATCTTTGATAATCATGGCGAGTGATGGGCCGAAAGTGAAGGCAGAGAGGAAATAGCTTAGGCCATTGTTCTAGAGGAAAAGGCTAATACAGTTGGCAGATAGGAAATTCCTGAAACATTAGGAAGATTGATGTCTCAATAAACCAAAGGGTGAAGAAAGCAGTGCACCAGTTACATCTACAGGAGCTTCTCACCCATCATTTTCTTAGAACTTCTTTCTTGGGGACATAACCAAAGAAAAGATTGTAATAACAATAGATGTGCTCAAGAAAATTTGTTAATTATTAACGTAACGCACAAGTCCACCATTAGCCGATATTATCCTCTTTGGGCTTTCCTTTTCGGACTTCCTCTCAAGATTTTTAAATTCCTCTGGGAGAGGGAGGTTTCTACACCCTTAAATGTTTCGTTCTACTCCTCAACCGATGTGGGATCTCACAATTAAGTACTGATGAGATCCTCAATGCTATTCAACTGTTTCAATTTTTGATCCGAGAAAGATTCAATTTTTAATCTGAAAGTTCTGAAGAATGCTTCGTCAAAGTGTTCTGTATCTGAATCAATGGTTGATTATGGCTTTATTTCAAATCTGAATCCTCATTTATATATATAACCATTGGAATGTAAACGTTGGTGCATGTATTGACAGGATCGTCCATCGACCAAGGTTCACGCCGCACCTGGTGGCGGATCTTCTCTGGACTTCCTGTTCGGAAACGGCAAGAGCTAAGTTGGTTAAGAACCAAGAAAGACCCACTATTGGTGGCTATCATATGTAAACTAGAACATTATATATTTCTACTTATGCACGAGGTTGTCTCCTCATGGTCAGAACCGTAGGCATGCGCTGGTGCTGATGGGCACTTCATGATGCTTTGTTTGAAACAAAAGTGATTATTGTATCTTGTTCTCCTCTGAATCTCTGGCATTCGCCTGTTTATGAACTCTTATGTTTGGCTCTCGCCATTAATTTCAATTCTGAATCTCACAGTCCACCCTTTCTGAATAACATCGCACCATTTAAAGAAAGATTATGTCTTAAACTTTAGACTTAATCAACATGATGATGGTTGTACTTTTGTACT

mRNA sequence

TAAGAACAATAATAATAAGATTTGAAAATTTGAAAATAATATTTAATAGCATCTCAGGTTCTCTGGTTGTGGCCTGTGTTGCGAAGGTGCTCTGCTGTCTTCCATCGTCTGCCTCCTTATCTCTTCCTTTTGATCCCATTTTCATTCACAGAACATTTTCGAGGAGAAACAAAAGGCTTGAAAATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGTTCCTTGGGCTACCTGTTTGGAGGTGGGGAGCCGGCCAACAATGTGCAAGCTTCTAAGAAACCCAATGGATCTTCTCAGCCTACCTCTTCTACTTCACAACCTGCTGATAAACACATACCTGCTGGCATTCCGGGGAATCATACTAACAATTACCATAGAGCAGATGGACAGAACTGTGGCAACTTTATCACGGATCGTCCATCGACCAAGGTTCACGCCGCACCTGGTGGCGGATCTTCTCTGGACTTCCTGTTCGGAAACGGCAAGAGCTAAGTTGGTTAAGAACCAAGAAAGACCCACTATTGGTGGCTATCATATGTAAACTAGAACATTATATATTTCTACTTATGCACGAGGTTGTCTCCTCATGGTCAGAACCGTAGGCATGCGCTGGTGCTGATGGGCACTTCATGATGCTTTGTTTGAAACAAAAGTGATTATTGTATCTTGTTCTCCTCTGAATCTCTGGCATTCGCCTGTTTATGAACTCTTATGTTTGGCTCTCGCCATTAATTTCAATTCTGAATCTCACAGTCCACCCTTTCTGAATAACATCGCACCATTTAAAGAAAGATTATGTCTTAAACTTTAGACTTAATCAACATGATGATGGTTGTACTTTTGTACT

Coding sequence (CDS)

ATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGTTCCTTGGGCTACCTGTTTGGAGGTGGGGAGCCGGCCAACAATGTGCAAGCTTCTAAGAAACCCAATGGATCTTCTCAGCCTACCTCTTCTACTTCACAACCTGCTGATAAACACATACCTGCTGGCATTCCGGGGAATCATACTAACAATTACCATAGAGCAGATGGACAGAACTGTGGCAACTTTATCACGGATCGTCCATCGACCAAGGTTCACGCCGCACCTGGTGGCGGATCTTCTCTGGACTTCCTGTTCGGAAACGGCAAGAGCTAA

Protein sequence

MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS

Homology

[Close]

BLAST of Cp4.1LG01g22550 vs. ExPASy Swiss-Prot
Match: Q2QQ99 (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.2e-27
Identity = 66/101 (65.35%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVSSGGGQSSLGYLFGGGE     ++++KP    +P  S+S    K IPAGI  +  
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEAP---KSAEKPAPVQKPAPSSSAEKLKEIPAGIQSSKA 60

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGK 102
           NNY RA+GQNCGNF+TDRPSTKV AAPGGGSSLD+LF   K
Sbjct: 61  NNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLFSGNK 98

[Close]

BLAST of Cp4.1LG01g22550 vs. ExPASy Swiss-Prot
Match: B3H4F1 (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.0e-25
Identity = 68/112 (60.71%), Postives = 76/112 (67.86%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGE-PANNVQASKKPNGSSQPTSSTSQP---------ADKH 60
           MGRGVS GGGQSSLGYLFG GE P   +  +  P+  + P S+   P           K 
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQ 60

Query: 61  IPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           IPAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGGSSLD+LFG G S
Sbjct: 61  IPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGGS 112

[Close]

BLAST of Cp4.1LG01g22550 vs. ExPASy Swiss-Prot
Match: Q9LE54 (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-24
Identity = 64/110 (58.18%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASKKPNGSSQPTSSTSQPA---DKHIP 60
           MGRGVS+GGGQSSLGYLFG GE       N   A  + +  + PT + +  A    K +P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  AGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           AG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G +
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110

[Close]

BLAST of Cp4.1LG01g22550 vs. ExPASy Swiss-Prot
Match: Q2R0W8 (Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-23
Identity = 64/110 (58.18%), Postives = 70/110 (63.64%), Query Frame = 0


Query: 2   GRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPT-------------SSTSQPAD 61
           GRGVSSGGGQSSLGYLFGGGE A   +A        + T             S ++    
Sbjct: 4   GRGVSSGGGQSSLGYLFGGGETAPAAKAKPAAAAEKETTPAPVKKAAVAAAASPSAAEKM 63

Query: 62  KHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
           K IPAGI     NNY RA GQNCGNF+TDRPSTKVHAAPGGGSSL +LFG
Sbjct: 64  KEIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFG 113

[Close]

BLAST of Cp4.1LG01g22550 vs. ExPASy Swiss-Prot
Match: Q7Y1L9 (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-22
Identity = 66/114 (57.89%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGE---PANN--VQASKKPNGSSQPTSSTSQPAD------- 60
           M RG S+GGGQSSLGYLFGG E   PA      A+  P  +  P ++ + PA+       
Sbjct: 1   MSRGGSAGGGQSSLGYLFGGNEAPKPAAKPAPAAAPAPAPAPAPAAAVAAPAEKPSPAKA 60

Query: 61  ---KHIPAGIPGNHT-NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
              K IPAGI G+ + NNYHRADGQN GNF+TDRPSTKVHAAPGGGSSL +LFG
Sbjct: 61  DATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFG 114

[Close]

BLAST of Cp4.1LG01g22550 vs. NCBI nr
Match: XP_022954496.1 (protein SPIRAL1-like 3 [Cucurbita moschata] >XP_022954504.1 protein SPIRAL1-like 3 [Cucurbita moschata] >XP_022954513.1 protein SPIRAL1-like 3 [Cucurbita moschata] >XP_022990950.1 protein SPIRAL1-like 3 [Cucurbita maxima] >XP_022990951.1 protein SPIRAL1-like 3 [Cucurbita maxima] >XP_022990952.1 protein SPIRAL1-like 3 [Cucurbita maxima] >XP_023538178.1 protein SPIRAL1-like 3 [Cucurbita pepo subsp. pepo] >XP_023538185.1 protein SPIRAL1-like 3 [Cucurbita pepo subsp. pepo] >XP_023538193.1 protein SPIRAL1-like 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204 bits (518), Expect = 4.96e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102
           NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Cp4.1LG01g22550 vs. NCBI nr
Match: KAG7033210.1 (Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (510), Expect = 8.24e-65
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQASKK NGSSQPTSSTSQPADKHIPAGIPGNHT
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKANGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102
           NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Cp4.1LG01g22550 vs. NCBI nr
Match: KAG6602534.1 (putative methylesterase 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204 bits (518), Expect = 3.44e-61
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT
Sbjct: 390 MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 449

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102
           NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS
Sbjct: 450 NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 491

[Close]

BLAST of Cp4.1LG01g22550 vs. NCBI nr
Match: XP_022134514.1 (protein SPIRAL1-like 3 [Momordica charantia] >XP_022134516.1 protein SPIRAL1-like 3 [Momordica charantia])

HSP 1 Score: 178 bits (451), Expect = 9.36e-56
Identity = 93/106 (87.74%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAG----IP 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQAS+KPNGSSQPTSST+Q  DK+IPAG    IP
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIP 60

Query: 61  GNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102
            N TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG+S
Sbjct: 61  ANCTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 106

[Close]

BLAST of Cp4.1LG01g22550 vs. NCBI nr
Match: XP_038889735.1 (protein SPIRAL1-like 1 [Benincasa hispida])

HSP 1 Score: 158 bits (400), Expect = 4.95e-48
Identity = 83/102 (81.37%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60
           M RGVSSGGGQSSLGYLFG GEPAN+VQ S+K  GSSQ  +STS   DK  PAGIPG+ T
Sbjct: 1   MSRGVSSGGGQSSLGYLFGNGEPANDVQPSQKSYGSSQLVASTSPLTDKQTPAGIPGHLT 60

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102
           NNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG+S
Sbjct: 61  NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 102

[Close]

BLAST of Cp4.1LG01g22550 vs. ExPASy TrEMBL
Match: A0A6J1JRI1 (protein SPIRAL1-like 3 OS=Cucurbita maxima OX=3661 GN=LOC111487687 PE=3 SV=1)

HSP 1 Score: 204 bits (518), Expect = 2.40e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102
           NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Cp4.1LG01g22550 vs. ExPASy TrEMBL
Match: A0A6J1GRA9 (protein SPIRAL1-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111456744 PE=3 SV=1)

HSP 1 Score: 204 bits (518), Expect = 2.40e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102
           NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS
Sbjct: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102

[Close]

BLAST of Cp4.1LG01g22550 vs. ExPASy TrEMBL
Match: A0A6J1BYY1 (protein SPIRAL1-like 3 OS=Momordica charantia OX=3673 GN=LOC111006740 PE=3 SV=1)

HSP 1 Score: 178 bits (451), Expect = 4.53e-56
Identity = 93/106 (87.74%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAG----IP 60
           MGRGVSSGGGQSSLGYLFGGGEPANNVQAS+KPNGSSQPTSST+Q  DK+IPAG    IP
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIP 60

Query: 61  GNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 102
            N TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG+S
Sbjct: 61  ANCTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS 106

[Close]

BLAST of Cp4.1LG01g22550 vs. ExPASy TrEMBL
Match: A0A067JWW4 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19962 PE=3 SV=1)

HSP 1 Score: 141 bits (356), Expect = 1.15e-41
Identity = 77/98 (78.57%), Postives = 82/98 (83.67%), Query Frame = 0


Query: 1  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60
          MGRGVS+GGGQSSLGYLFG GE ANN +A+K P  SSQ     SQP DK IPAGI GN T
Sbjct: 1  MGRGVSAGGGQSSLGYLFGNGESANNDKAAKSP--SSQKPIVGSQPIDKQIPAGIHGNLT 60

Query: 61 NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 98
          NNY+RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG
Sbjct: 61 NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFG 96

[Close]

BLAST of Cp4.1LG01g22550 vs. ExPASy TrEMBL
Match: A0A6A5N8H9 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00005977 PE=3 SV=1)

HSP 1 Score: 139 bits (350), Expect = 2.28e-40
Identity = 81/126 (64.29%), Postives = 86/126 (68.25%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQAS------------KKPNGSSQPTS------- 60
           MGRGVSSGGGQSSLGYLFG GE  NNVQ S            + P+G+SQP S       
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGEAPNNVQGSNNQGQPGNGVRAQNPSGASQPISTDQGQTA 60

Query: 61  --------STSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSL 99
                   S S P DK IPAGIPGN  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSL
Sbjct: 61  NCSHAQNASGSSPIDKGIPAGIPGNLKNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSL 120

[Close]

BLAST of Cp4.1LG01g22550 vs. TAIR 10
Match: AT1G26355.1 (SPIRAL1-like1 )

HSP 1 Score: 116.3 bits (290), Expect = 1.4e-26
Identity = 68/112 (60.71%), Postives = 76/112 (67.86%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGE-PANNVQASKKPNGSSQPTSSTSQP---------ADKH 60
           MGRGVS GGGQSSLGYLFG GE P   +  +  P+  + P S+   P           K 
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQ 60

Query: 61  IPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           IPAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGGSSLD+LFG G S
Sbjct: 61  IPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGGS 112

[Close]

BLAST of Cp4.1LG01g22550 vs. TAIR 10
Match: AT1G69230.1 (SPIRAL1-like2 )

HSP 1 Score: 114.0 bits (284), Expect = 7.1e-26
Identity = 64/110 (58.18%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASKKPNGSSQPTSSTSQPA---DKHIP 60
           MGRGVS+GGGQSSLGYLFG GE       N   A  + +  + PT + +  A    K +P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  AGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           AG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G +
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110

[Close]

BLAST of Cp4.1LG01g22550 vs. TAIR 10
Match: AT1G69230.2 (SPIRAL1-like2 )

HSP 1 Score: 114.0 bits (284), Expect = 7.1e-26
Identity = 64/110 (58.18%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASKKPNGSSQPTSSTSQPA---DKHIP 60
           MGRGVS+GGGQSSLGYLFG GE       N   A  + +  + PT + +  A    K +P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  AGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           AG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G +
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110

[Close]

BLAST of Cp4.1LG01g22550 vs. TAIR 10
Match: AT2G03680.1 (spiral1 )

HSP 1 Score: 102.4 bits (254), Expect = 2.1e-22
Identity = 68/120 (56.67%), Postives = 78/120 (65.00%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKP------NGSSQP----------TSSTS 60
           MGRG S GGGQSSL YLFGG  PA     + +P      NG + P          T++TS
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60

Query: 61  -QPAD--KHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGK 102
            +PA+  K IPAGI     NNY RA+GQN GNF+TDRPSTKVHAAPGGGSSLD+LF  GK
Sbjct: 61  VEPAELNKQIPAGIK-TPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTGGK 119

[Close]

BLAST of Cp4.1LG01g22550 vs. TAIR 10
Match: AT2G03680.2 (spiral1 )

HSP 1 Score: 102.4 bits (254), Expect = 2.1e-22
Identity = 68/120 (56.67%), Postives = 78/120 (65.00%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKP------NGSSQP----------TSSTS 60
           MGRG S GGGQSSL YLFGG  PA     + +P      NG + P          T++TS
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60

Query: 61  -QPAD--KHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGK 102
            +PA+  K IPAGI     NNY RA+GQN GNF+TDRPSTKVHAAPGGGSSLD+LF  GK
Sbjct: 61  VEPAELNKQIPAGIK-TPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTGGK 119

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g22550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QQ99	8.2e-27	65.35	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 ...	[more]
B3H4F1	2.0e-25	60.71	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1	[more]
Q9LE54	1.0e-24	58.18	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1	[more]
Q2R0W8	1.4e-23	58.18	Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0629400 ...	[more]
Q7Y1L9	2.1e-22	57.89	Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 ...	[more]

BLAST of Cp4.1LG01g22550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954496.1	4.96e-66	100.00	protein SPIRAL1-like 3 [Cucurbita moschata] >XP_022954504.1 protein SPIRAL1-like...	[more]
KAG7033210.1	8.24e-65	99.02	Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6602534.1	3.44e-61	100.00	putative methylesterase 11, chloroplastic, partial [Cucurbita argyrosperma subsp...	[more]
XP_022134514.1	9.36e-56	87.74	protein SPIRAL1-like 3 [Momordica charantia] >XP_022134516.1 protein SPIRAL1-lik...	[more]
XP_038889735.1	4.95e-48	81.37	protein SPIRAL1-like 1 [Benincasa hispida]	[more]

BLAST of Cp4.1LG01g22550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRI1	2.40e-66	100.00	protein SPIRAL1-like 3 OS=Cucurbita maxima OX=3661 GN=LOC111487687 PE=3 SV=1	[more]
A0A6J1GRA9	2.40e-66	100.00	protein SPIRAL1-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111456744 PE=3 SV=1	[more]
A0A6J1BYY1	4.53e-56	87.74	protein SPIRAL1-like 3 OS=Momordica charantia OX=3673 GN=LOC111006740 PE=3 SV=1	[more]
A0A067JWW4	1.15e-41	78.57	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19962 PE=3 SV=1	[more]
A0A6A5N8H9	2.28e-40	64.29	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00005977 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g22550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26355.1	1.4e-26	60.71	SPIRAL1-like1	[more]
AT1G69230.1	7.1e-26	58.18	SPIRAL1-like2	[more]
AT1G69230.2	7.1e-26	58.18	SPIRAL1-like2	[more]
AT2G03680.1	2.1e-22	56.67	spiral1	[more]
AT2G03680.2	2.1e-22	56.67	spiral1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..102
None	No IPR available	PANTHER	PTHR33403:SF28	PROTEIN SPIRAL1-LIKE 2	coord: 1..100
IPR039613	Protein SPIRAL1-like	PANTHER	PTHR33403	SPR1	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g22550.1	Cp4.1LG01g22550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
cellular_component	GO:0010005	cortical microtubule, transverse to long axis