Cp4.1LG01g09060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g09060
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptioncytochrome c oxidase subunit 6a, mitochondrial-like
LocationCp4.1LG01: 4521386 .. 4524027 (+)
RNA-Seq ExpressionCp4.1LG01g09060
SyntenyCp4.1LG01g09060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAGATCACACGTTTGGGGAAGTTTTGGTGAAAGGGCTCTCGATCGAAATTGCAAGGGTATGGTCATTTCAATTATAACTCGGGCATTGGCGATTTGTTAGAGAAAGAGAGAGTCAAAAGAGAATGTCAATGGCGACGATCCGATCCAATCTTCTTCGCGCTGCCTTCCGCGGTGCCTCTCGGAACTCCGCTCAGCCTAAACGCGGCTTTTCGTCCTCTGCTCACGACGATGCTCGTAAGTCTCTCTCTCGGTATTTCTGGATATGTTTTTTTTTCTTTATTGACGGAATTTTTCTTGTTACTTTTGGCAACTTCGTTTAGCCCATTCATTTTCCTGGCCTATTTTTATGATGAAATTGGGGAAACTAGGTGATGTTAATTATTGAATCGTGTTCAGAAATTTGGACCAAGATAATTTGGTCGGGCGCTCTTTGTTCCTTTTAGATTGCAAGTCTTGCAAGGGGAGGTTTTTTTAAAAAAAACTTCAAATTCAGATTTAAATGTTATTATTCAATAGTTTTGTTAAATCATAGAATGGGATGGGAGTATATACATGACATATTTGACAATTAACTGTAGATAGGGTTTCCAGTCGCTAAAGGAGTAGTTTCGATTTAAAGTTCGTGGTAAGGAAAAAGACAAGAGGCGCACAAGCTTCCTGTTCCATTACTGAGTGGCAACAATATCATTCTTGATATCTGTAATTACATAAAAATGCTTTCTAAAGTCTTAGATGTGGCTTGTGGTAGGTTCAGTTTCCTTTTGATTTCACATAAATAAGACATGAAGGAAAGGGAATATGCAGTAAGTTTATTAGACGGTTTAGGGCTTTAGTTAAAAAAAATTCTCCTCTGGGAAGTTTATACACCTCTAATCCTACGCCTGCCTCTTATTTCTTTATTTCCCCCATTTTTTCTTTCTTTCTTTTCCTCACACAATTCTGGGTTGCGAGTAAGGGAACGAACATTATTCTGTGTTTTGAGGTGATTTCAGTAAATTGTTGGAGCTAAACCAATCTGTGCTGTGAATTTATTTTATATTGATCCACCATAACATATACTCGATGGTGGCCTTTACTTAGTTGGGTACAAATTATGTATTGTTATTTTTAAATACTATTTCAGACTTATAGTGTACAAGCAAGTGGGAGAGAAAAATTTTATGCAGGAGCGCAATGATGCTTGTACTGCCTATGCTTTATCTCTCATACAAATTTTCTTTCTTTATTTCAGTTGAAACGGCAAAATGGGAGAAGATTACTTATGCAGGCATTGCAGCCTGCACCACTTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGTGAGCTACAACTTTAGTCAATTTATAATTTTCCTACCACTTCTCAATATCCTAGTTGCATTATTCATTGTACTCTCATGTGTGGCCAATTCATTTTTGTTTGGGTTTTTATTGTATGCAGGCATACCCATATTTGCACATACGCAATAAAGAGTTCCCATGGGGTAAGTTGCCATTGCATTACAAGTTCTATGACATCTTTTATATCTCTTGGCAGTCGCAATTTGGGTTTTGATGAGGTAACTAGAACTGGATGCTGCAGTGATGTCATATAGTATATATTTACTGGATGCCAAGCAAACTTACATCTACCTTGTAACTAATATATTTACTGCTAACTTGGCAGCTAGCAACTAATATGCTCATAAATACCTCGTTCAGCTTGCTAACAGTTTTTAGTCCTATTATATAACCTTGTCCTTTCATTAACCCAACTCTCACTACTTTTAAATGCTCCATGGTCAAATTTCTAATGGTAGTTCAACAGCTTCCTCTTTCTGTTGGTCGATCATCTCAATGGTCTATGGATACTTCTGGGATAAAAGTGTTTGTAAGCTGTTTCCAAGAAGTAAACATTTTAGAATAAAAGTTATATGTTTTTGTAACTGTTTTCGACAGTTGCTTCTCTCAGTATATTTTAGAAGAACTGCAGTTGAAATGTTAAAATCTTTACAAACGAAAAAGTCATAGCATCATCGTAGGAAAAAGAGCTGGTGATGATGTACCACGGCATTTTTCAGAACTGGTTGAATTTGATCGATGATCTTATATTCGTTCATCTTTGCTCTCTGCTCGTTGCTCATTTGCTCCTTTTCTGTTTATTATTTATTGTGAAAATAATATTGTTTTATTTTCAATCCCTTTTGCATCAGGTCCCGATGGTCTCTTTGAGGTGAAACATCACTGAGGACTATTTTGGTTCAAGGGGACATCGAGCATGGTAATTCTACTTCTCATTTGGTTCATATCAGAAAGACTTCGTTGACCCGTTTGGTTGGATTTTTCTTTTTAATGATGCGTGGGCCATTTTGCATTTGTTAAATGCTAGCAGGGTCCTATGTGAATGAATCATGGTTTAATTTCTTGTGTTGTCAAGACTATCCTTCCTGATTAATAAGCCAAACTTTCCACCATTCTAAGGTTCAGTTTGCATTATGCTGTGTTTGGATTGAAATGTGAGTTTGTAAGTAATAATAGTATTTGAGGTGGTGATGTTTACTTGGTAAACTGAAGCAGTTGTTTGGTTTATCAACAAAGATGGAATAGGAACTTCGATTTATAAATATTAACGATACATTTTTAT

mRNA sequence

CGAGATCACACGTTTGGGGAAGTTTTGGTGAAAGGGCTCTCGATCGAAATTGCAAGGGTATGGTCATTTCAATTATAACTCGGGCATTGGCGATTTGTTAGAGAAAGAGAGAGTCAAAAGAGAATGTCAATGGCGACGATCCGATCCAATCTTCTTCGCGCTGCCTTCCGCGGTGCCTCTCGGAACTCCGCTCAGCCTAAACGCGGCTTTTCGTCCTCTGCTCACGACGATGCTCTTGAAACGGCAAAATGGGAGAAGATTACTTATGCAGGCATTGCAGCCTGCACCACTTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGCATACCCATATTTGCACATACGCAATAAAGAGTTCCCATGGGGTCCCGATGGTCTCTTTGAGGTGAAACATCACTGAGGACTATTTTGGTTCAAGGGGACATCGAGCATGGTAATTCTACTTCTCATTTGGTTCATATCAGAAAGACTTCGTTGACCCGTTTGGTTGGATTTTTCTTTTTAATGATGCGTGGGCCATTTTGCATTTGTTAAATGCTAGCAGGGTCCTATGTGAATGAATCATGGTTTAATTTCTTGTGTTGTCAAGACTATCCTTCCTGATTAATAAGCCAAACTTTCCACCATTCTAAGGTTCAGTTTGCATTATGCTGTGTTTGGATTGAAATGTGAGTTTGTAAGTAATAATAGTATTTGAGGTGGTGATGTTTACTTGGTAAACTGAAGCAGTTGTTTGGTTTATCAACAAAGATGGAATAGGAACTTCGATTTATAAATATTAACGATACATTTTTAT

Coding sequence (CDS)

ATGTCAATGGCGACGATCCGATCCAATCTTCTTCGCGCTGCCTTCCGCGGTGCCTCTCGGAACTCCGCTCAGCCTAAACGCGGCTTTTCGTCCTCTGCTCACGACGATGCTCTTGAAACGGCAAAATGGGAGAAGATTACTTATGCAGGCATTGCAGCCTGCACCACTTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGCATACCCATATTTGCACATACGCAATAAAGAGTTCCCATGGGGTCCCGATGGTCTCTTTGAGGTGAAACATCACTGA

Protein sequence

MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Homology
[Close]
BLAST of Cp4.1LG01g09060 vs. ExPASy Swiss-Prot
Match: Q9T070 (Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX6A PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.9e-33
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 0 

Query: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSA-HDDALETAKWEKITYAGIAACTTLAF 60
          M+ A +RS L RA  R A + S  PKR FSSSA HDDA E AKWEKITY GIA+CT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Sbjct: 61 YVLSKGHHHGEDPPAYPHMHIRNKEFPWGPDGLFEVKHN 99

[Close]
BLAST of Cp4.1LG01g09060 vs. NCBI nr
Match: XP_023545456.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203 bits (516), Expect = 7.47e-66
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of Cp4.1LG01g09060 vs. NCBI nr
Match: XP_022941809.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG6600678.1 Cytochrome c oxidase subunit 6a, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031316.1 Cytochrome c oxidase subunit 6a, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (510), Expect = 6.15e-65
Identity = 96/98 (97.96%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY 60
          M+MATIRSNLLRAAFRGASRNSAQPKRGF+SSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of Cp4.1LG01g09060 vs. NCBI nr
Match: XP_023001309.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 198 bits (504), Expect = 5.06e-64
Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 0 

Query: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY 60
          M+MATIRSNLLRAA RGASRNSAQPKRGF+SSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of Cp4.1LG01g09060 vs. NCBI nr
Match: XP_038905594.1 (cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida])

HSP 1 Score: 190 bits (483), Expect = 8.10e-61
Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 0 

Query: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY 60
          M+MA+IRSNLLRAA RGASRNSAQPKRGF+SSAHDDA ETAKWEKITYAGIA CT LAFY
Sbjct: 1  MAMASIRSNLLRAAVRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of Cp4.1LG01g09060 vs. NCBI nr
Match: XP_022929363.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG6577328.1 Cytochrome c oxidase subunit 6a, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189 bits (481), Expect = 1.64e-60
Identity = 90/98 (91.84%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY 60
          M+MATIRSNLLRAAFRGASRNSAQPKRGF+SSAHDDA ETAKWEKITYAGI +C+ LAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98
          NLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of Cp4.1LG01g09060 vs. ExPASy TrEMBL
Match: A0A6J1FPI8 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111447063 PE=3 SV=1)

HSP 1 Score: 201 bits (510), Expect = 2.98e-65
Identity = 96/98 (97.96%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY 60
          M+MATIRSNLLRAAFRGASRNSAQPKRGF+SSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of Cp4.1LG01g09060 vs. ExPASy TrEMBL
Match: A0A6J1KMD3 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495450 PE=3 SV=1)

HSP 1 Score: 198 bits (504), Expect = 2.45e-64
Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 0 

Query: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY 60
          M+MATIRSNLLRAA RGASRNSAQPKRGF+SSAHDDALETAKWEKITYAGIAACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of Cp4.1LG01g09060 vs. ExPASy TrEMBL
Match: A0A6J1ERW3 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111435960 PE=3 SV=1)

HSP 1 Score: 189 bits (481), Expect = 7.92e-61
Identity = 90/98 (91.84%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY 60
          M+MATIRSNLLRAAFRGASRNSAQPKRGF+SSAHDDA ETAKWEKITYAGI +C+ LAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98
          NLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of Cp4.1LG01g09060 vs. ExPASy TrEMBL
Match: A0A6J1C3V4 (cytochrome c oxidase subunit 6a, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008246 PE=3 SV=1)

HSP 1 Score: 189 bits (479), Expect = 1.60e-60
Identity = 90/98 (91.84%), Postives = 93/98 (94.90%), Query Frame = 0 

Query: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY 60
          M+MATIRSNLLRAAFRGAS+NSAQPKRGF+SSAHDD  ETAKWEKITYAGI ACTTLAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASQNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFE K H
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFETKEH 98

[Close]
BLAST of Cp4.1LG01g09060 vs. ExPASy TrEMBL
Match: A0A6J1J8L1 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111482732 PE=3 SV=1)

HSP 1 Score: 185 bits (470), Expect = 3.78e-59
Identity = 88/98 (89.80%), Postives = 93/98 (94.90%), Query Frame = 0 

Query: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSAHDDALETAKWEKITYAGIAACTTLAFY 60
          M+MA IRSNLLRAAFRGASRN AQPKRGF+SSAHDDA ETAKWEKITYAGI +C+ LAFY
Sbjct: 1  MAMAMIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98
          NLSKGHPH+EEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]
BLAST of Cp4.1LG01g09060 vs. TAIR 10
Match: AT4G37830.1 (cytochrome c oxidase-related )

HSP 1 Score: 142.9 bits (359), Expect = 1.4e-34
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 0 

Query: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSA-HDDALETAKWEKITYAGIAACTTLAF 60
          M+ A +RS L RA  R A + S  PKR FSSSA HDDA E AKWEKITY GIA+CT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Sbjct: 61 YVLSKGHHHGEDPPAYPHMHIRNKEFPWGPDGLFEVKHN 99

[Close]
BLAST of Cp4.1LG01g09060 vs. TAIR 10
Match: AT4G37830.2 (cytochrome c oxidase-related )

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-26
Identity = 62/99 (62.63%), Postives = 68/99 (68.69%), Query Frame = 0 

Query: 1  MSMATIRSNLLRAAFRGASRNSAQPKRGFSSSA-HDDALETAKWEKITYAGIAACTTLAF 60
          M+ A +RS L RA  R A + S  PKR FSSSA HDDA E AKWEKITY GIA+CT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          Y LSKGH H E+PP          EFPWGPDGLFEVKH+
Sbjct: 61 YVLSKGHHHGEDPP----------EFPWGPDGLFEVKHN 89

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g09060 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9T0701.9e-3370.71Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana OX=3702 G... [more]
BLAST of Cp4.1LG01g09060 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023545456.17.47e-66100.00cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo][more]
XP_022941809.16.15e-6597.96cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG660... [more]
XP_023001309.15.06e-6496.94cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima][more]
XP_038905594.18.10e-6192.86cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida][more]
XP_022929363.11.64e-6091.84cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG657... [more]
BLAST of Cp4.1LG01g09060 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FPI82.98e-6597.96cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=366... [more]
A0A6J1KMD32.45e-6496.94cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1ERW37.92e-6191.84cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=366... [more]
A0A6J1C3V41.60e-6091.84cytochrome c oxidase subunit 6a, mitochondrial OS=Momordica charantia OX=3673 GN... [more]
A0A6J1J8L13.78e-5989.80cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 ... [more]
BLAST of Cp4.1LG01g09060 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G37830.11.4e-3470.71cytochrome c oxidase-related [more]
AT4G37830.22.3e-2662.63cytochrome c oxidase-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001349Cytochrome c oxidase, subunit VIaPIRSFPIRSF000277COX_VIacoord: 1..98
e-value: 2.3E-22
score: 77.3
IPR001349Cytochrome c oxidase, subunit VIaPANTHERPTHR11504CYTOCHROME C OXIDASE POLYPEPTIDE VIAcoord: 1..98
IPR036418Cytochrome c oxidase, subunit VIa superfamilyGENE3D4.10.95.10Cytochrome c oxidase, subunit VIacoord: 30..98
e-value: 8.4E-14
score: 53.2
IPR036418Cytochrome c oxidase, subunit VIa superfamilySUPERFAMILY81411Mitochondrial cytochrome c oxidase subunit VIacoord: 30..97
NoneNo IPR availablePANTHERPTHR11504:SF6CYTOCHROME C OXIDASE SUBUNIT 6A1-RELATEDcoord: 1..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g09060.1Cp4.1LG01g09060.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0050790 regulation of catalytic activity
cellular_component GO:0005751 mitochondrial respiratory chain complex IV
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0030234 enzyme regulator activity