CmoCh19G005500 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh19G005500
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionpathogenesis-related protein 1-like
LocationCmo_Chr19: 6333194 .. 6333682 (+)
RNA-Seq ExpressionCmoCh19G005500
SyntenyCmoCh19G005500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTTTTTAAGCTCTCCCTCTTCCTCTTCTATGTCTCGAGCTTTGCAATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCAAGACTTTGTCAATGCTCACAATGCAGCTCGTGCCCTTGTTGGCGTTGGGCACGTCAAGTGGGACGAAAGGATAGCTAGATTTGCTCGACAATATGCCAACCAACGTAAACATAATTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGTAGCTACAACTTATCAGGTATTGCTGCAGTTTGGATGTGGGTCACCGAGAGGCAATATTACAATCCTCGCACCAATACTTGTGCGGCTGGCAAGGTGTGTGGCCATTAGACTCAAGTGGTGTGGAGAAAGTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAACAATCGTGGTACGTTCATCACTTGCAACTATGATCCACCGGGCAATGTTAGAGGCCAAAGGCCATTCTGA

mRNA sequence

ATGGATCTTTTTAAGCTCTCCCTCTTCCTCTTCTATGTCTCGAGCTTTGCAATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCAAGACTTTGTCAATGCTCACAATGCAGCTCGTGCCCTTGTTGGCGTTGGGCACGTCAAGTGGGACGAAAGGATAGCTAGATTTGCTCGACAATATGCCAACCAACGTAAACATAATTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGTAGCTACAACTTATCAGGTATTGCTGCAGTTTGGATGTGGGTCACCGAGAGGCAATATTACAATCCTCGCACCAATACTTGTGCGGCTGGCAAGACTCAAGTGGTGTGGAGAAAGTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAACAATCGTGGTACGTTCATCACTTGCAACTATGATCCACCGGGCAATGTTAGAGGCCAAAGGCCATTCTGA

Coding sequence (CDS)

ATGGATCTTTTTAAGCTCTCCCTCTTCCTCTTCTATGTCTCGAGCTTTGCAATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCAAGACTTTGTCAATGCTCACAATGCAGCTCGTGCCCTTGTTGGCGTTGGGCACGTCAAGTGGGACGAAAGGATAGCTAGATTTGCTCGACAATATGCCAACCAACGTAAACATAATTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGTAGCTACAACTTATCAGGTATTGCTGCAGTTTGGATGTGGGTCACCGAGAGGCAATATTACAATCCTCGCACCAATACTTGTGCGGCTGGCAAGACTCAAGTGGTGTGGAGAAAGTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAACAATCGTGGTACGTTCATCACTTGCAACTATGATCCACCGGGCAATGTTAGAGGCCAAAGGCCATTCTGA

Protein sequence

MDLFKLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGKTQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF
Homology
BLAST of CmoCh19G005500 vs. ExPASy Swiss-Prot
Match: Q41359 (Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.9e-46
Identity = 98/158 (62.03%), Postives = 114/158 (72.15%), Query Frame = 0

Query: 7   SLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKH 66
           S+ L  V +  M+  S+AQ+SPQD+V+AHNAAR+ V VG V WDE +A FARQYA  R  
Sbjct: 11  SVALVCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAG 70

Query: 67  NCKLVHSGGP-YGENLAW-SSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK-----TQVV 126
           +C+LVHSG P YGENLA+ S + L+G  AV MWV ER  YNP TNTCA GK     TQVV
Sbjct: 71  DCRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVV 130

Query: 127 WRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           WR SVRIGCA+VRC NN   FITCNY PPGN  GQRP+
Sbjct: 131 WRNSVRIGCARVRC-NNGAWFITCNYSPPGNYAGQRPY 167

BLAST of CmoCh19G005500 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-46
Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 0

Query: 8   LFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKHN 67
           L +F     A++  S AQDSPQD++  HN AR  VGVG ++WDER+A +AR YA Q + N
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 68  CKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTC---AAGKTQVVWRKSV 127
           C+L+HSGGPYGENLAW S +LSG++AV MWV+E+  YN   NTC       TQVVWRKSV
Sbjct: 70  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNGVCGHYTQVVWRKSV 129

Query: 128 RIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           R+GCAKVRC NN GT I+CNYDP GN   ++P+
Sbjct: 130 RLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

BLAST of CmoCh19G005500 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 7.8e-45
Identity = 87/137 (63.50%), Postives = 104/137 (75.91%), Query Frame = 0

Query: 24  AQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKHNCKLVHSGGPYGENLAW 83
           AQDS QD+VNAHN AR+ +GVG ++WDE +A +AR YANQ K +C+LVHS GPYGENLA 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 84  SSYNLSGIAAVWMWVTERQYYNPRTNTC---AAGKTQVVWRKSVRIGCAKVRCTNNRGTF 143
           S  +LSG+AAV +WV E+  YN  TNTC       TQVVWR SVR+GCAKVRC NN GT 
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTCNGVCGHYTQVVWRNSVRLGCAKVRC-NNGGTI 145

Query: 144 ITCNYDPPGNVRGQRPF 158
           I+CNYDPPGN   Q+P+
Sbjct: 146 ISCNYDPPGNYANQKPY 161

BLAST of CmoCh19G005500 vs. ExPASy Swiss-Prot
Match: P35792 (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.1e-44
Identity = 89/160 (55.62%), Postives = 111/160 (69.38%), Query Frame = 0

Query: 5   KLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQR 64
           KL++ L    + AM+  S AQ+SPQD+V+ HNAAR+ VGVG V W  ++  FA+ YANQR
Sbjct: 5   KLAILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQR 64

Query: 65  KHNCKLVHSGGPYGENLAWSSYNLSGIA--AVWMWVTERQYYNPRTNTCAAGK-----TQ 124
            ++CKL HSGGPYGEN+ W S      A  AV  WV E++ YN  +NTCAAGK     TQ
Sbjct: 65  INDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQ 124

Query: 125 VVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           VVWR S  IGCA+V C NNRG FITCNY+P GN+ GQ+P+
Sbjct: 125 VVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

BLAST of CmoCh19G005500 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.6e-44
Identity = 90/160 (56.25%), Postives = 111/160 (69.38%), Query Frame = 0

Query: 5   KLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQR 64
           KL + L    S AM+  S AQ+SPQD+V+ HNAARA VGVG V W  ++  FA+ YANQR
Sbjct: 5   KLVILLALAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQR 64

Query: 65  KHNCKLVHSGGPYGENLAWSSYNLSGIA--AVWMWVTERQYYNPRTNTCAAGK-----TQ 124
            ++CKL HSGGPYGEN+ W S      A  AV  WV+E++ Y+  +NTCAAGK     TQ
Sbjct: 65  INDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQ 124

Query: 125 VVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           VVWR S  IGCA+V C NNRG FITCNY+P GN+ GQ+P+
Sbjct: 125 VVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

BLAST of CmoCh19G005500 vs. ExPASy TrEMBL
Match: A0A6J1GMD3 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455281 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.0e-79
Identity = 144/162 (88.89%), Postives = 149/162 (91.98%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQY 60
           MDLFKLSLFL+YV SFAMLPSSLAQDSPQDFVNAHNAARALVGVG VKWDER+ RFARQY
Sbjct: 1   MDLFKLSLFLYYVMSFAMLPSSLAQDSPQDFVNAHNAARALVGVGPVKWDERVTRFARQY 60

Query: 61  ANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK----- 120
           ANQ KH+CKLVH GGPYGENLAWS YNLSGIAAVWMWVTE+QYYNPR NTCA GK     
Sbjct: 61  ANQLKHSCKLVHLGGPYGENLAWSGYNLSGIAAVWMWVTEKQYYNPRINTCATGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           TQVVWRKSVRIGCAKV+CTNNRGTFITCNYDPPGNVRGQRPF
Sbjct: 121 TQVVWRKSVRIGCAKVKCTNNRGTFITCNYDPPGNVRGQRPF 162

BLAST of CmoCh19G005500 vs. ExPASy TrEMBL
Match: A0A6J1GKU7 (pathogenesis-related protein PRB1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111455285 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.3e-71
Identity = 133/162 (82.10%), Postives = 144/162 (88.89%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQY 60
           MDLFKLSLFLFYVSSF MLPSSLAQDSPQDFVNAHNAARA VGVG VKWDE++A FARQY
Sbjct: 1   MDLFKLSLFLFYVSSFTMLPSSLAQDSPQDFVNAHNAARAQVGVGPVKWDEKVASFARQY 60

Query: 61  ANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK----- 120
           ANQR ++C+L+HS GPYGEN+AW S +LSGIAAV MWV E+Q+YNPRTNTCA GK     
Sbjct: 61  ANQRINDCRLMHSSGPYGENIAWGSSDLSGIAAVRMWVDEKQFYNPRTNTCATGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           TQVVWR SVRIGCAKV+CTNNRGTFITCNYDPPGNV GQRPF
Sbjct: 121 TQVVWRSSVRIGCAKVKCTNNRGTFITCNYDPPGNVVGQRPF 162

BLAST of CmoCh19G005500 vs. ExPASy TrEMBL
Match: A0A6J1I658 (pathogenesis-related protein PR-1 type-like OS=Cucurbita maxima OX=3661 GN=LOC111471050 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.8e-67
Identity = 130/163 (79.75%), Postives = 140/163 (85.89%), Query Frame = 0

Query: 1   MDLFKLSLFLFY-VSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQ 60
           MDLFKLSL LFY V SFAM  SSLAQDSPQDFVNAHNAARA VGVG ++WDER+A FARQ
Sbjct: 1   MDLFKLSLSLFYVVLSFAMFHSSLAQDSPQDFVNAHNAARAQVGVGPIRWDERVASFARQ 60

Query: 61  YANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK---- 120
           YANQR ++C+LVHSGGPYGEN+AW S +LSG  AV MWV E+Q+YNP TNTCAAGK    
Sbjct: 61  YANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSTNTCAAGKVCGH 120

Query: 121 -TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
            TQVVWR SVRIGCAKVRCTNNRGTFITCNYDPPGNV GQRPF
Sbjct: 121 YTQVVWRNSVRIGCAKVRCTNNRGTFITCNYDPPGNVVGQRPF 163

BLAST of CmoCh19G005500 vs. ExPASy TrEMBL
Match: A0A6J1GLT8 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455432 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.0e-64
Identity = 125/163 (76.69%), Postives = 137/163 (84.05%), Query Frame = 0

Query: 1   MDLFKLSLFLFY-VSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQ 60
           MDLFKLSL +FY V SFAM  SSLAQDSPQDFVNAHNAARA VGVG V+WDER+A FARQ
Sbjct: 1   MDLFKLSLSIFYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQ 60

Query: 61  YANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK---- 120
           YANQR ++C+LVHSGGPYGEN+AW S +LSG  AV MWV E+Q+YNP  NTCAAG+    
Sbjct: 61  YANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGH 120

Query: 121 -TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
            TQVVWR SVRIGCAKVRCTNNRGTFI CNYDP GN+ GQRPF
Sbjct: 121 YTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 163

BLAST of CmoCh19G005500 vs. ExPASy TrEMBL
Match: A0A6J1GME9 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455303 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.7e-63
Identity = 122/162 (75.31%), Postives = 138/162 (85.19%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQY 60
           MD+FKLSL LFYV SFAMLPSSLAQDSPQDFVN HNAARA VGVG V+WDE +A FARQ+
Sbjct: 1   MDVFKLSL-LFYVLSFAMLPSSLAQDSPQDFVNGHNAARAQVGVGPVRWDESVANFARQF 60

Query: 61  ANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK----- 120
           ANQR ++C+L+HSGGP+GEN+A  S ++SG  AV MWV E+ +YNPRTNTCAAGK     
Sbjct: 61  ANQRINDCQLMHSGGPFGENIAKHSSDMSGTDAVQMWVDEKPFYNPRTNTCAAGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           TQVVWR SVRIGCAKVRCTNNRGTFITCNYDPPGN+  +RPF
Sbjct: 121 TQVVWRNSVRIGCAKVRCTNNRGTFITCNYDPPGNISSERPF 161

BLAST of CmoCh19G005500 vs. NCBI nr
Match: XP_023511432.1 (pathogenesis-related protein PR-1 type-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.8 bits (808), Expect = 2.0e-82
Identity = 151/162 (93.21%), Postives = 154/162 (95.06%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQY 60
           MDLFKLSLFLFYVSSFAML  SLAQDSPQD+VNAHNAARALVG+G VKWDERIARFARQY
Sbjct: 1   MDLFKLSLFLFYVSSFAMLSLSLAQDSPQDYVNAHNAARALVGIGPVKWDERIARFARQY 60

Query: 61  ANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK----- 120
           ANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK     
Sbjct: 61  ANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           TQVVWRKSVRIGCAKV+CTNNRGTFITCNYDPPGNVRGQRPF
Sbjct: 121 TQVVWRKSVRIGCAKVKCTNNRGTFITCNYDPPGNVRGQRPF 162

BLAST of CmoCh19G005500 vs. NCBI nr
Match: XP_023511454.1 (pathogenesis-related protein PR-1 type-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.1 bits (806), Expect = 3.5e-82
Identity = 150/162 (92.59%), Postives = 154/162 (95.06%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQY 60
           MDLFKLSLFLFYVSSFAMLP  LAQDSPQD+VNAHNAARALVG+G VKWDERIARFARQY
Sbjct: 1   MDLFKLSLFLFYVSSFAMLPLFLAQDSPQDYVNAHNAARALVGIGPVKWDERIARFARQY 60

Query: 61  ANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK----- 120
           ANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVT+RQYYNPRTNTCAAGK     
Sbjct: 61  ANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTKRQYYNPRTNTCAAGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           TQVVWRKSVRIGCAKV+CTNNRGTFITCNYDPPGNVRGQRPF
Sbjct: 121 TQVVWRKSVRIGCAKVKCTNNRGTFITCNYDPPGNVRGQRPF 162

BLAST of CmoCh19G005500 vs. NCBI nr
Match: XP_022952650.1 (pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 304.3 bits (778), Expect = 6.1e-79
Identity = 144/162 (88.89%), Postives = 149/162 (91.98%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQY 60
           MDLFKLSLFL+YV SFAMLPSSLAQDSPQDFVNAHNAARALVGVG VKWDER+ RFARQY
Sbjct: 1   MDLFKLSLFLYYVMSFAMLPSSLAQDSPQDFVNAHNAARALVGVGPVKWDERVTRFARQY 60

Query: 61  ANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK----- 120
           ANQ KH+CKLVH GGPYGENLAWS YNLSGIAAVWMWVTE+QYYNPR NTCA GK     
Sbjct: 61  ANQLKHSCKLVHLGGPYGENLAWSGYNLSGIAAVWMWVTEKQYYNPRINTCATGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           TQVVWRKSVRIGCAKV+CTNNRGTFITCNYDPPGNVRGQRPF
Sbjct: 121 TQVVWRKSVRIGCAKVKCTNNRGTFITCNYDPPGNVRGQRPF 162

BLAST of CmoCh19G005500 vs. NCBI nr
Match: KAG6571907.1 (hypothetical protein SDJN03_28635, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293.9 bits (751), Expect = 8.3e-76
Identity = 138/145 (95.17%), Postives = 139/145 (95.86%), Query Frame = 0

Query: 18  MLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKHNCKLVHSGGPY 77
           MLPSSLAQDSPQDFVNAHNAARALVGVG VKWDERIARFARQYANQRKHNCKLVHSGGPY
Sbjct: 1   MLPSSLAQDSPQDFVNAHNAARALVGVGQVKWDERIARFARQYANQRKHNCKLVHSGGPY 60

Query: 78  GENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK-----TQVVWRKSVRIGCAKVR 137
           GENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK     TQVVWRKSVRIGCAKV+
Sbjct: 61  GENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGKVCGHYTQVVWRKSVRIGCAKVK 120

Query: 138 CTNNRGTFITCNYDPPGNVRGQRPF 158
           CTNNRGTFITCNYDPPGNVRGQRPF
Sbjct: 121 CTNNRGTFITCNYDPPGNVRGQRPF 145

BLAST of CmoCh19G005500 vs. NCBI nr
Match: XP_022952656.1 (pathogenesis-related protein PRB1-2-like [Cucurbita moschata])

HSP 1 Score: 278.1 bits (710), Expect = 4.7e-71
Identity = 133/162 (82.10%), Postives = 144/162 (88.89%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQY 60
           MDLFKLSLFLFYVSSF MLPSSLAQDSPQDFVNAHNAARA VGVG VKWDE++A FARQY
Sbjct: 1   MDLFKLSLFLFYVSSFTMLPSSLAQDSPQDFVNAHNAARAQVGVGPVKWDEKVASFARQY 60

Query: 61  ANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK----- 120
           ANQR ++C+L+HS GPYGEN+AW S +LSGIAAV MWV E+Q+YNPRTNTCA GK     
Sbjct: 61  ANQRINDCRLMHSSGPYGENIAWGSSDLSGIAAVRMWVDEKQFYNPRTNTCATGKVCGHY 120

Query: 121 TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           TQVVWR SVRIGCAKV+CTNNRGTFITCNYDPPGNV GQRPF
Sbjct: 121 TQVVWRSSVRIGCAKVKCTNNRGTFITCNYDPPGNVVGQRPF 162

BLAST of CmoCh19G005500 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-47
Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 0

Query: 8   LFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKHN 67
           L +F     A++  S AQDSPQD++  HN AR  VGVG ++WDER+A +AR YA Q + N
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 68  CKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTC---AAGKTQVVWRKSV 127
           C+L+HSGGPYGENLAW S +LSG++AV MWV+E+  YN   NTC       TQVVWRKSV
Sbjct: 70  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNGVCGHYTQVVWRKSV 129

Query: 128 RIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           R+GCAKVRC NN GT I+CNYDP GN   ++P+
Sbjct: 130 RLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

BLAST of CmoCh19G005500 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 181.4 bits (459), Expect = 5.6e-46
Identity = 87/137 (63.50%), Postives = 104/137 (75.91%), Query Frame = 0

Query: 24  AQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKHNCKLVHSGGPYGENLAW 83
           AQDS QD+VNAHN AR+ +GVG ++WDE +A +AR YANQ K +C+LVHS GPYGENLA 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 84  SSYNLSGIAAVWMWVTERQYYNPRTNTC---AAGKTQVVWRKSVRIGCAKVRCTNNRGTF 143
           S  +LSG+AAV +WV E+  YN  TNTC       TQVVWR SVR+GCAKVRC NN GT 
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTCNGVCGHYTQVVWRNSVRLGCAKVRC-NNGGTI 145

Query: 144 ITCNYDPPGNVRGQRPF 158
           I+CNYDPPGN   Q+P+
Sbjct: 146 ISCNYDPPGNYANQKPY 161

BLAST of CmoCh19G005500 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 4.7e-45
Identity = 92/164 (56.10%), Postives = 115/164 (70.12%), Query Frame = 0

Query: 1   MDLFKLSLFLFYVSSF--AMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFAR 60
           M +F  S  LF   +F   ++    AQDSPQDF+  HN ARA VGVG ++WDE++A +AR
Sbjct: 1   MKIFNSSQNLFLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYAR 60

Query: 61  QYANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK--- 120
            YANQRK +C + HS G YGEN+AWSS +++G+AAV MWV E+  Y+  +NTCA  K   
Sbjct: 61  NYANQRKGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCG 120

Query: 121 --TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
             TQVVWR S R+GCAKVRC NN  TFITCNYDPPGN  G+ P+
Sbjct: 121 HYTQVVWRNSERLGCAKVRC-NNGQTFITCNYDPPGNWVGEWPY 163

BLAST of CmoCh19G005500 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 1.3e-39
Identity = 82/162 (50.62%), Postives = 106/162 (65.43%), Query Frame = 0

Query: 3   LFKLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYAN 62
           LF L++ LFY         SLA+D  Q F+ AHN AR  VG+  + WD+ +A +A  YAN
Sbjct: 9   LFLLAIALFY--------GSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYAN 68

Query: 63  QRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTC-------AAGK 122
           QR ++C LVHS GP+GEN+A SS  +S   A  MW+ E+QYY+  +NTC           
Sbjct: 69  QRINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHY 128

Query: 123 TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           TQVVW+ +VR+GCAKV C N+ GTFITCNYDPPGN  G++PF
Sbjct: 129 TQVVWKNTVRLGCAKVVC-NSGGTFITCNYDPPGNYIGEKPF 161

BLAST of CmoCh19G005500 vs. TAIR 10
Match: AT4G33710.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 1.3e-39
Identity = 78/141 (55.32%), Postives = 100/141 (70.92%), Query Frame = 0

Query: 24  AQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKHNCKLVHSG--GPYGENL 83
           AQD  QD+++ HN AR  V V H+KW    AR+A  YA +RK +C+L+HS   G YGENL
Sbjct: 27  AQDRRQDYLDVHNHARDDVSVPHIKWHAGAARYAWNYAQRRKRDCRLIHSNSRGRYGENL 86

Query: 84  AWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK-----TQVVWRKSVRIGCAKVRCTNN 143
           AWSS ++SG AAV +WV E+  Y  ++NTC AGK     TQVVW+ S  +GCAKV+C +N
Sbjct: 87  AWSSGDMSGAAAVRLWVREKSDYFHKSNTCRAGKQCGHYTQVVWKNSEWVGCAKVKC-DN 146

Query: 144 RGTFITCNYDPPGNVRGQRPF 158
            GTF+TCNY  PGNVRG+RP+
Sbjct: 147 GGTFVTCNYSHPGNVRGRRPY 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q413591.9e-4662.03Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1[more]
P331542.4e-4658.17Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1... [more]
Q9ZNS47.8e-4563.50Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1[more]
P357925.1e-4455.63Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
P357936.6e-4456.25Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1GMD33.0e-7988.89pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145528... [more]
A0A6J1GKU72.3e-7182.10pathogenesis-related protein PRB1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1I6585.8e-6779.75pathogenesis-related protein PR-1 type-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1GLT86.0e-6476.69pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145543... [more]
A0A6J1GME91.7e-6375.31pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145530... [more]
Match NameE-valueIdentityDescription
XP_023511432.12.0e-8293.21pathogenesis-related protein PR-1 type-like [Cucurbita pepo subsp. pepo][more]
XP_023511454.13.5e-8292.59pathogenesis-related protein PR-1 type-like [Cucurbita pepo subsp. pepo][more]
XP_022952650.16.1e-7988.89pathogenesis-related protein 1-like [Cucurbita moschata][more]
KAG6571907.18.3e-7695.17hypothetical protein SDJN03_28635, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022952656.14.7e-7182.10pathogenesis-related protein PRB1-2-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT2G14610.11.7e-4758.17pathogenesis-related gene 1 [more]
AT2G14580.15.6e-4663.50basic pathogenesis-related protein 1 [more]
AT4G33720.14.7e-4556.10CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT3G19690.11.3e-3950.62CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT4G33710.11.3e-3955.32CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein-relatedPRINTSPR00837V5TPXLIKEcoord: 140..153
score: 53.61
coord: 47..65
score: 34.63
coord: 112..128
score: 48.67
coord: 93..106
score: 38.2
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 22..157
IPR014044CAP domainSMARTSM00198SCP_3coord: 26..153
e-value: 3.6E-50
score: 182.7
IPR014044CAP domainPFAMPF00188CAPcoord: 32..145
e-value: 4.4E-15
score: 56.6
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 21..157
e-value: 1.9E-37
score: 130.7
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 15..157
NoneNo IPR availablePANTHERPTHR10334:SF488PATHOGENESIS-RELATED PROTEIN 1coord: 22..157
NoneNo IPR availableCDDcd05381CAP_PR-1coord: 28..157
e-value: 2.40757E-80
score: 231.754
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 140..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G005500.1CmoCh19G005500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region