CmoCh19G004180 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G004180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	low-temperature-induced 65 kDa protein-like
Location	Cmo_Chr19: 5021799 .. 5022602 (-)
RNA-Seq Expression	CmoCh19G004180
Synteny	CmoCh19G004180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGGCGGTGTGGGTGGAGAAAGGCAGCATGAAGGCGTCGGAATTGGAATGCCTCCTCCAGGTCCAAGAGAAACGACAAGTCGTCCTGCTGCAGTTACCACACTCTTTACTTCCGTCGATAACTCTGCTGATACCTCAAACACGACCATGTCTCTGTCTCCAAGTAAGTTGGAGGAGGATCCTCACGCGCCTAAGGACAAAACCCACCTTCACCCTCGTAATTCCGAGGTCAAAGTTCACGATCCCGCAAGCACAGGTAACTAATTTTACATCAAAAAAAAAATAAAAAAACCCTTTTTTTAGTCTGTCCGTTTTCATTTTGAACTAGGGAGCGAAGAAGCAGGGGAATCGCAGATTTTGGATTCATTTGCAAAAATGAAAGTAAACGACGAACAGAATCAAAGCAGAGATCAGGTCAGTTACGCTCAGAAGATCTCAGCTGTGGGTTCAGCCGTGAGTGGAAAAGCAGTGGCAGCGAAGGATTTTGTGGCATCGAAGATAGCTTTAACAGTGACAGAGAAGCTGAAGCCAGGGGAGGAGGACAGAGCCCTGTCGGAAGTGATTTCGGAAGCTTTGAATAGAAGGAAGCAGGAGGTGGTGAAAGTTGGAGAAAGTGCATTTAGGGAGCCGCCGAAAGGGAGTGCAACGGAGTCGGGGAGGAGTGTGGTGGGTATGGTGAAAGACACGGTGGGGTCGTGGCTGGGGAAAGCGGGTGACCAATCGGCGGGGCAAGGGAGGCCGGGGAAGGACCACGGTGGGACGGAGGCGGAGGTGCGGATACTGCAGGAATCGGCGAATTGA

mRNA sequence

ATGAGGGGCGGTGTGGGTGGAGAAAGGCAGCATGAAGGCGTCGGAATTGGAATGCCTCCTCCAGGTCCAAGAGAAACGACAAGTCGTCCTGCTGCAGTTACCACACTCTTTACTTCCGTCGATAACTCTGCTGATACCTCAAACACGACCATGTCTCTGTCTCCAAGTAAGTTGGAGGAGGATCCTCACGCGCCTAAGGACAAAACCCACCTTCACCCTCGTAATTCCGAGGTCAAAGTTCACGATCCCGCAAGCACAGGGAGCGAAGAAGCAGGGGAATCGCAGATTTTGGATTCATTTGCAAAAATGAAAGTAAACGACGAACAGAATCAAAGCAGAGATCAGGTCAGTTACGCTCAGAAGATCTCAGCTGTGGGTTCAGCCGTGAGTGGAAAAGCAGTGGCAGCGAAGGATTTTGTGGCATCGAAGATAGCTTTAACAGTGACAGAGAAGCTGAAGCCAGGGGAGGAGGACAGAGCCCTGTCGGAAGTGATTTCGGAAGCTTTGAATAGAAGGAAGCAGGAGGTGGTGAAAGTTGGAGAAAGTGCATTTAGGGAGCCGCCGAAAGGGAGTGCAACGGAGTCGGGGAGGAGTGTGGTGGGTATGGTGAAAGACACGGTGGGGTCGTGGCTGGGGAAAGCGGGTGACCAATCGGCGGGGCAAGGGAGGCCGGGGAAGGACCACGGTGGGACGGAGGCGGAGGTGCGGATACTGCAGGAATCGGCGAATTGA

Coding sequence (CDS)

ATGAGGGGCGGTGTGGGTGGAGAAAGGCAGCATGAAGGCGTCGGAATTGGAATGCCTCCTCCAGGTCCAAGAGAAACGACAAGTCGTCCTGCTGCAGTTACCACACTCTTTACTTCCGTCGATAACTCTGCTGATACCTCAAACACGACCATGTCTCTGTCTCCAAGTAAGTTGGAGGAGGATCCTCACGCGCCTAAGGACAAAACCCACCTTCACCCTCGTAATTCCGAGGTCAAAGTTCACGATCCCGCAAGCACAGGGAGCGAAGAAGCAGGGGAATCGCAGATTTTGGATTCATTTGCAAAAATGAAAGTAAACGACGAACAGAATCAAAGCAGAGATCAGGTCAGTTACGCTCAGAAGATCTCAGCTGTGGGTTCAGCCGTGAGTGGAAAAGCAGTGGCAGCGAAGGATTTTGTGGCATCGAAGATAGCTTTAACAGTGACAGAGAAGCTGAAGCCAGGGGAGGAGGACAGAGCCCTGTCGGAAGTGATTTCGGAAGCTTTGAATAGAAGGAAGCAGGAGGTGGTGAAAGTTGGAGAAAGTGCATTTAGGGAGCCGCCGAAAGGGAGTGCAACGGAGTCGGGGAGGAGTGTGGTGGGTATGGTGAAAGACACGGTGGGGTCGTGGCTGGGGAAAGCGGGTGACCAATCGGCGGGGCAAGGGAGGCCGGGGAAGGACCACGGTGGGACGGAGGCGGAGGTGCGGATACTGCAGGAATCGGCGAATTGA

Protein sequence

MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTSVDNSADTSNTTMSLSPSKLEEDPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVGESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQESAN

Homology

[Close]

BLAST of CmoCh19G004180 vs. ExPASy TrEMBL
Match: A0A6J1GLA2 (low-temperature-induced 78 kDa protein-like OS=Cucurbita moschata OX=3662 GN=LOC111455302 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 2.7e-124
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTSVDNSADTSNTTMSLSPSKLEE 60
           MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTSVDNSADTSNTTMSLSPSKLEE
Sbjct: 79  MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTSVDNSADTSNTTMSLSPSKLEE 138

Query: 61  DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 120
           DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ
Sbjct: 139 DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 198

Query: 121 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 180
           KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG
Sbjct: 199 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 258

Query: 181 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 240
           ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE
Sbjct: 259 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 318

Query: 241 SAN 244
           SAN
Sbjct: 319 SAN 321

[Close]

BLAST of CmoCh19G004180 vs. ExPASy TrEMBL
Match: A0A6J1I850 (low-temperature-induced 65 kDa protein-like OS=Cucurbita maxima OX=3661 GN=LOC111470536 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 7.0e-120
Identity = 236/243 (97.12%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTSVDNSADTSNTTMSLSPSKLEE 60
           MRGGVGGERQHEGVGIGMPPPGP+ETTSRPAAVTTLFTSVDNSADTSNTTM LSPSKLEE
Sbjct: 76  MRGGVGGERQHEGVGIGMPPPGPKETTSRPAAVTTLFTSVDNSADTSNTTMPLSPSKLEE 135

Query: 61  DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 120
           DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQIL SFAKMKVNDEQNQSRDQVSYAQ
Sbjct: 136 DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILGSFAKMKVNDEQNQSRDQVSYAQ 195

Query: 121 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 180
           KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEA NRRKQEVVKVG
Sbjct: 196 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEAFNRRKQEVVKVG 255

Query: 181 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 240
           ESAFREP KGS TESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRI QE
Sbjct: 256 ESAFREPTKGSVTESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRIPQE 315

Query: 241 SAN 244
           SAN
Sbjct: 316 SAN 318

[Close]

BLAST of CmoCh19G004180 vs. ExPASy TrEMBL
Match: A0A5D3E5L4 (Low-temperature-induced 65 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003650 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.9e-62
Identity = 183/348 (52.59%), Postives = 201/348 (57.76%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGM----------PPPGPRETTSRPAAVTTLFTSVDN-------- 60
           MR    G+ QH+ VGIG+          PPP  RE  SRP+AV T FTSV+N        
Sbjct: 14  MRSATAGKGQHQDVGIGIGTTTMMHNYAPPPARREIRSRPSAVDTGFTSVENPTANHKVD 73

Query: 61  -SADTSNTTMSLSPSKLEEDPHAPKDKTHLHPRNSEVKVHDPASTGSEE-AGESQILDSF 120
            S    NTTMSLSP KLEEDPH PKD     P  SEVKVHDP++ GSEE AG+SQ+ DSF
Sbjct: 74  DSNVAPNTTMSLSPWKLEEDPHGPKDPR--APHISEVKVHDPSNRGSEEAAGKSQVFDSF 133

Query: 121 AKMKVN-------------DEQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVAS----- 180
           AKMKV+             D+++   D ++YAQKISAVGSAVSGKAVAAKDFVAS     
Sbjct: 134 AKMKVDDKKPNRTGSPHGLDQEHGGEDHINYAQKISAVGSAVSGKAVAAKDFVASKLGYG 193

Query: 181 ---------------------KIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVGE 240
                                KIALTVTEKLKPGEEDRALSEVISEALNRRK EVVKVGE
Sbjct: 194 ETKEGTTADKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEALNRRKDEVVKVGE 253

Query: 241 SAFREPP-KGSATES---------------------------GRSVVGMVKDTVGSWLGK 244
           SAF  PP KG  TES                           GRSVVGMVKDTVGSWLGK
Sbjct: 254 SAFGRPPSKGVVTESEELTRRLGEEDKEATEKSSVASAAAATGRSVVGMVKDTVGSWLGK 313

[Close]

BLAST of CmoCh19G004180 vs. ExPASy TrEMBL
Match: A0A1S3CPX7 (low-temperature-induced 65 kDa protein OS=Cucumis melo OX=3656 GN=LOC103503460 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.9e-62
Identity = 183/348 (52.59%), Postives = 201/348 (57.76%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGM----------PPPGPRETTSRPAAVTTLFTSVDN-------- 60
           MR    G+ QH+ VGIG+          PPP  RE  SRP+AV T FTSV+N        
Sbjct: 94  MRSATAGKGQHQDVGIGIGTTTMMHNYAPPPARREIRSRPSAVDTGFTSVENPTANHKVD 153

Query: 61  -SADTSNTTMSLSPSKLEEDPHAPKDKTHLHPRNSEVKVHDPASTGSEE-AGESQILDSF 120
            S    NTTMSLSP KLEEDPH PKD     P  SEVKVHDP++ GSEE AG+SQ+ DSF
Sbjct: 154 DSNVAPNTTMSLSPWKLEEDPHGPKDPR--APHISEVKVHDPSNRGSEEAAGKSQVFDSF 213

Query: 121 AKMKVN-------------DEQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVAS----- 180
           AKMKV+             D+++   D ++YAQKISAVGSAVSGKAVAAKDFVAS     
Sbjct: 214 AKMKVDDKKPNRTGSPHGLDQEHGGEDHINYAQKISAVGSAVSGKAVAAKDFVASKLGYG 273

Query: 181 ---------------------KIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVGE 240
                                KIALTVTEKLKPGEEDRALSEVISEALNRRK EVVKVGE
Sbjct: 274 ETKEGTTADKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEALNRRKDEVVKVGE 333

Query: 241 SAFREPP-KGSATES---------------------------GRSVVGMVKDTVGSWLGK 244
           SAF  PP KG  TES                           GRSVVGMVKDTVGSWLGK
Sbjct: 334 SAFGRPPSKGVVTESEELTRRLGEEDKEATEKSSVASAAAATGRSVVGMVKDTVGSWLGK 393

[Close]

BLAST of CmoCh19G004180 vs. ExPASy TrEMBL
Match: A0A0A0LIE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914030 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 4.0e-59
Identity = 178/347 (51.30%), Postives = 194/347 (55.91%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGM---------PPPGPRETTSRPAAVTTLFTS---------VDN 60
           MR  V G+ QH+ VGIG          PPP  RE TSRP+AV T FTS         VD+
Sbjct: 1   MRSAVAGKGQHQDVGIGTGTTRMMHNEPPPARREITSRPSAVDTGFTSIHNTTANYKVDD 60

Query: 61  SADTSNTTMSLSPSKLEEDPHAPKDKTHLHPRNSEVKVHDPASTGSEE-AGESQILDSFA 120
           S    NTTMSLSP KLE+DPHAPKD     P  SEVKVHDP++ GSEE AG SQ+ DSFA
Sbjct: 61  SNVAPNTTMSLSPWKLEDDPHAPKDPH--APHISEVKVHDPSNRGSEEAAGRSQVFDSFA 120

Query: 121 KMKVND-------------EQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVAS------ 180
           +MKV+D             ++    DQ +YAQKISAVGSAVSGKAVAAKDFVAS      
Sbjct: 121 RMKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGE 180

Query: 181 --------------------KIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVGES 240
                               KIALTVTEKLKPGEEDRALSEVISEA  RRK EVVKVGES
Sbjct: 181 TTEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGES 240

Query: 241 AFREPP-KGSATES---------------------------GRSVVGMVKDTVGSWLGKA 244
           AF  PP KG  TES                           GRSVVGMVKDTVGSWLG A
Sbjct: 241 AFGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNA 300

[Close]

BLAST of CmoCh19G004180 vs. NCBI nr
Match: XP_022952678.1 (low-temperature-induced 78 kDa protein-like [Cucurbita moschata])

HSP 1 Score: 454.5 bits (1168), Expect = 5.7e-124
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTSVDNSADTSNTTMSLSPSKLEE 60
           MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTSVDNSADTSNTTMSLSPSKLEE
Sbjct: 79  MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTSVDNSADTSNTTMSLSPSKLEE 138

Query: 61  DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 120
           DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ
Sbjct: 139 DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 198

Query: 121 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 180
           KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG
Sbjct: 199 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 258

Query: 181 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 240
           ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE
Sbjct: 259 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 318

Query: 241 SAN 244
           SAN
Sbjct: 319 SAN 321

[Close]

BLAST of CmoCh19G004180 vs. NCBI nr
Match: KAG7011496.1 (hypothetical protein SDJN02_26402, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 449.9 bits (1156), Expect = 1.4e-122
Identity = 241/243 (99.18%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTSVDNSADTSNTTMSLSPSKLEE 60
           MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFT VDNSADTSNTTMSLSPSKLEE
Sbjct: 1   MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTPVDNSADTSNTTMSLSPSKLEE 60

Query: 61  DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 120
           DPHAPK KTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ
Sbjct: 61  DPHAPKGKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 120

Query: 121 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 180
           KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG
Sbjct: 121 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 180

Query: 181 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 240
           ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE
Sbjct: 181 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 240

Query: 241 SAN 244
           SAN
Sbjct: 241 SAN 243

[Close]

BLAST of CmoCh19G004180 vs. NCBI nr
Match: KAG6571801.1 (hypothetical protein SDJN03_28529, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 447.6 bits (1150), Expect = 6.9e-122
Identity = 240/243 (98.77%), Postives = 240/243 (98.77%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTSVDNSADTSNTTMSLSPSKLEE 60
           MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFT VDNSADTSNTTMSLSPSKLEE
Sbjct: 79  MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTPVDNSADTSNTTMSLSPSKLEE 138

Query: 61  DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 120
           DPHAPK KTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ
Sbjct: 139 DPHAPKGKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 198

Query: 121 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 180
           KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG
Sbjct: 199 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 258

Query: 181 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 240
           ESAFREPPKGSATESGRSVVG VKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE
Sbjct: 259 ESAFREPPKGSATESGRSVVGTVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 318

Query: 241 SAN 244
           SAN
Sbjct: 319 SAN 321

[Close]

BLAST of CmoCh19G004180 vs. NCBI nr
Match: XP_023554181.1 (low-temperature-induced 65 kDa protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 443.0 bits (1138), Expect = 1.7e-120
Identity = 237/243 (97.53%), Postives = 240/243 (98.77%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTSVDNSADTSNTTMSLSPSKLEE 60
           MRGGVGGERQHEGVGIGMPPPGPRETTS PAAVTTLFTSVDNSAD SNTTMSLSPSKLEE
Sbjct: 77  MRGGVGGERQHEGVGIGMPPPGPRETTSHPAAVTTLFTSVDNSADASNTTMSLSPSKLEE 136

Query: 61  DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 120
           DPHAPK+KTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKM+VNDEQNQSRDQVSYAQ
Sbjct: 137 DPHAPKNKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMEVNDEQNQSRDQVSYAQ 196

Query: 121 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 180
           KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG
Sbjct: 197 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 256

Query: 181 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 240
           ESAFREPPKGSATESGRSVVG+VKDTVGSWLGKAG QSAGQGRPGKDHGGTEAEVRILQE
Sbjct: 257 ESAFREPPKGSATESGRSVVGVVKDTVGSWLGKAGGQSAGQGRPGKDHGGTEAEVRILQE 316

Query: 241 SAN 244
           SAN
Sbjct: 317 SAN 319

[Close]

BLAST of CmoCh19G004180 vs. NCBI nr
Match: XP_022971843.1 (low-temperature-induced 65 kDa protein-like [Cucurbita maxima])

HSP 1 Score: 439.9 bits (1130), Expect = 1.4e-119
Identity = 236/243 (97.12%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTSVDNSADTSNTTMSLSPSKLEE 60
           MRGGVGGERQHEGVGIGMPPPGP+ETTSRPAAVTTLFTSVDNSADTSNTTM LSPSKLEE
Sbjct: 76  MRGGVGGERQHEGVGIGMPPPGPKETTSRPAAVTTLFTSVDNSADTSNTTMPLSPSKLEE 135

Query: 61  DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 120
           DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQIL SFAKMKVNDEQNQSRDQVSYAQ
Sbjct: 136 DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILGSFAKMKVNDEQNQSRDQVSYAQ 195

Query: 121 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 180
           KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEA NRRKQEVVKVG
Sbjct: 196 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEAFNRRKQEVVKVG 255

Query: 181 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 240
           ESAFREP KGS TESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRI QE
Sbjct: 256 ESAFREPTKGSVTESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRIPQE 315

Query: 241 SAN 244
           SAN
Sbjct: 316 SAN 318

[Close]

BLAST of CmoCh19G004180 vs. TAIR 10
Match: AT5G52300.1 (CAP160 protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.6e-04
Identity = 35/99 (35.35%), Postives = 46/99 (46.46%), Query Frame = 0


Query: 132 KAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALN-----RRKQEVVKVGESAFRE 191
           K V AK++        ++EKLKPGEED+ALSE+I+E L+      +K    K  E    +
Sbjct: 482 KGVTAKNY--------ISEKLKPGEEDKALSEMIAEKLHFGGGGEKKTTATKEVEVTVEK 541

Query: 192 PPKGSATE-------------SGRSVVGMVKDTVGSWLG 213
            P     E              G  +VG VK  V SWLG
Sbjct: 542 IPSDQIAEGKGHGEAVAEEGKGGEGMVGKVKGAVTSWLG 572

[Close]

BLAST of CmoCh19G004180 vs. TAIR 10
Match: AT5G52300.2 (CAP160 protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.6e-04
Identity = 35/99 (35.35%), Postives = 46/99 (46.46%), Query Frame = 0


Query: 132 KAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALN-----RRKQEVVKVGESAFRE 191
           K V AK++        ++EKLKPGEED+ALSE+I+E L+      +K    K  E    +
Sbjct: 481 KGVTAKNY--------ISEKLKPGEEDKALSEMIAEKLHFGGGGEKKTTATKEVEVTVEK 540

Query: 192 PPKGSATE-------------SGRSVVGMVKDTVGSWLG 213
            P     E              G  +VG VK  V SWLG
Sbjct: 541 IPSDQIAEGKGHGEAVAEEGKGGEGMVGKVKGAVTSWLG 571

The following BLAST results are available for this feature:

BLAST of CmoCh19G004180 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh19G004180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLA2	2.7e-124	100.00	low-temperature-induced 78 kDa protein-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1I850	7.0e-120	97.12	low-temperature-induced 65 kDa protein-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5D3E5L4	3.9e-62	52.59	Low-temperature-induced 65 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CPX7	3.9e-62	52.59	low-temperature-induced 65 kDa protein OS=Cucumis melo OX=3656 GN=LOC103503460 P...	[more]
A0A0A0LIE7	4.0e-59	51.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914030 PE=4 SV=1	[more]

BLAST of CmoCh19G004180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952678.1	5.7e-124	100.00	low-temperature-induced 78 kDa protein-like [Cucurbita moschata]	[more]
KAG7011496.1	1.4e-122	99.18	hypothetical protein SDJN02_26402, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6571801.1	6.9e-122	98.77	hypothetical protein SDJN03_28529, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023554181.1	1.7e-120	97.53	low-temperature-induced 65 kDa protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971843.1	1.4e-119	97.12	low-temperature-induced 65 kDa protein-like [Cucurbita maxima]	[more]

BLAST of CmoCh19G004180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52300.1	1.6e-04	35.35	CAP160 protein	[more]
AT5G52300.2	1.6e-04	35.35	CAP160 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..243
None	No IPR available	PANTHER	PTHR33836:SF1	LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED	coord: 38..112
None	No IPR available	PANTHER	PTHR33836:SF1	LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED	coord: 148..221
IPR037491	Low-temperature-induced 78kDa/65kDa	PANTHER	PTHR33836	LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED	coord: 148..221
IPR037491	Low-temperature-induced 78kDa/65kDa	PANTHER	PTHR33836	LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED	coord: 38..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G004180.1	CmoCh19G004180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009737	response to abscisic acid