CmoCh19G002120 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G002120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	NAC domain-containing protein
Location	Cmo_Chr19: 1426916 .. 1427615 (-)
RNA-Seq Expression	CmoCh19G002120
Synteny	CmoCh19G002120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTCGTAATCGCTCTCTCTTGCCCGTGGGCGTGAAATTCAAGCCTACCGATCAGCAGCTTCTTCAGTATCTAAACTTCAAGATTCACGGTCTCCCATATTTCAAGGGCGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGTTTTGGAGGCATCAACGGCGAAGATCTCTATTTTTTCACCAAACTCAAAAGGCTAACCAATAACTGCGAACATCTGTGGGCGCATATCAATCGCAAGATTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTTGGCCAATCCAATTTTTGCTACCAAAATCGATAAACAAATAATTGGCTATTGCAAGTGCTTCAGGTTCGTTCTATTATTTTGATTTCAATTTTCGTTAGAATCTTTAATCTTTTGTTTGTGTTCTTGGAACATTTAGGTACGAGAATATCCAATTGCCCGAGCATCATGGCGAATGGTTTATGCATGAGTATAGCTTGCACCAAGATTCGATACACCAAGTTGTAGACTCGGATTACGTTTTATGTCGACTTAGCAAGAATGAAAGAGTTGAAAGAAAATTACCAAAAAATCTTGAGCTACAGCAACATAGCAAGAAAAGAATAATGGCGCCAGGATCGACCATTGAACAAGACACTATGTCTGACACGACCATCGATCAAGATATCGATTTATAA

mRNA sequence

ATGGATTCTCGTAATCGCTCTCTCTTGCCCGTGGGCGTGAAATTCAAGCCTACCGATCAGCAGCTTCTTCAGTATCTAAACTTCAAGATTCACGGTCTCCCATATTTCAAGGGCGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGTTTTGGAGGCATCAACGGCGAAGATCTCTATTTTTTCACCAAACTCAAAAGGCTAACCAATAACTGCGAACATCTGTGGGCGCATATCAATCGCAAGATTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTTGGCCAATCCAATTTTTGCTACCAAAATCGATAAACAAATAATTGGCTATTGCAAGTGCTTCAGGTACGAGAATATCCAATTGCCCGAGCATCATGGCGAATGGTTTATGCATGAGTATAGCTTGCACCAAGATTCGATACACCAAGTTGTAGACTCGGATTACGTTTTATGTCGACTTAGCAAGAATGAAAGAGTTGAAAGAAAATTACCAAAAAATCTTGAGCTACAGCAACATAGCAAGAAAAGAATAATGGCGCCAGGATCGACCATTGAACAAGACACTATGTCTGACACGACCATCGATCAAGATATCGATTTATAA

Coding sequence (CDS)

ATGGATTCTCGTAATCGCTCTCTCTTGCCCGTGGGCGTGAAATTCAAGCCTACCGATCAGCAGCTTCTTCAGTATCTAAACTTCAAGATTCACGGTCTCCCATATTTCAAGGGCGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGTTTTGGAGGCATCAACGGCGAAGATCTCTATTTTTTCACCAAACTCAAAAGGCTAACCAATAACTGCGAACATCTGTGGGCGCATATCAATCGCAAGATTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTTGGCCAATCCAATTTTTGCTACCAAAATCGATAAACAAATAATTGGCTATTGCAAGTGCTTCAGGTACGAGAATATCCAATTGCCCGAGCATCATGGCGAATGGTTTATGCATGAGTATAGCTTGCACCAAGATTCGATACACCAAGTTGTAGACTCGGATTACGTTTTATGTCGACTTAGCAAGAATGAAAGAGTTGAAAGAAAATTACCAAAAAATCTTGAGCTACAGCAACATAGCAAGAAAAGAATAATGGCGCCAGGATCGACCATTGAACAAGACACTATGTCTGACACGACCATCGATCAAGATATCGATTTATAA

Protein sequence

MDSRNRSLLPVGVKFKPTDQQLLQYLNFKIHGLPYFKGAVLDCDLYGEMEPWEIWLRFGGINGEDLYFFTKLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIGYCKCFRYENIQLPEHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERVERKLPKNLELQQHSKKRIMAPGSTIEQDTMSDTTIDQDIDL

Homology

[Close]

BLAST of CmoCh19G002120 vs. ExPASy Swiss-Prot
Match: Q9C8W9 (NAC domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=NAC030 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.9e-10
Identity = 47/164 (28.66%), Postives = 74/164 (45.12%), Query Frame = 0


Query: 1   MDSRNRSLLPVGVKFKPTDQQLL-QYLNFKIHGLPYFKGAVLDCDLYGEMEPWEIWLR-- 60
           MD+  +S +P G +F PT+++L+  YL+ KI+ +      +++ DLY +MEPW+I  R  
Sbjct: 1   MDNIMQSSMPPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLY-KMEPWDIQARCK 60

Query: 61  FGGINGEDLYFFTKLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIG 120
            G     + YFF+   R            NR    A G W        + +      +IG
Sbjct: 61  LGYEEQNEWYFFSHKDRKYPT----GTRTNR--ATAAGFWKATGRDKAVLS---KNSVIG 120

Query: 121 YCKCFRYENIQLPE-HHGEWFMHEYSLHQDSIHQVVDSDYVLCR 161
             K   Y   + P     +W MHEY L    +  V +  +V+CR
Sbjct: 121 MRKTLVYYKGRAPNGRKSDWIMHEYRLQNSELAPVQEEGWVVCR 154

[Close]

BLAST of CmoCh19G002120 vs. ExPASy Swiss-Prot
Match: Q84WP6 (NAC domain-containing protein 43 OS=Arabidopsis thaliana OX=3702 GN=NAC043 PE=2 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 3.9e-07
Identity = 58/223 (26.01%), Postives = 97/223 (43.50%), Query Frame = 0


Query: 6   RSLLPVGVKFKPTDQQLLQ-YLNFKIHGLPYFKGAVLDCDLYGEMEPWEI--WLRFGGIN 65
           +S +P G +F PT+++LLQ YL  K++ +      + D DL  ++EPW+I    + G   
Sbjct: 13  QSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDL-NKLEPWDIQEMCKIGTTP 72

Query: 66  GEDLYFFT-KLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIGYCKC 125
             D YFF+ K K+            NR    A G W        I++   + + IG  K 
Sbjct: 73  QNDWYFFSHKDKKYPTG-----TRTNR--ATAAGFWKATGRDKIIYS---NGRRIGMRKT 132

Query: 126 FRYENIQLPE-HHGEWFMHEYSLHQD-------SIHQVV--------DSDYVLCRLSKNE 185
             +   + P     +W MHEY L  +       ++H+VV        D  +V+CR+ K +
Sbjct: 133 LVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKK 192

Query: 186 RVERKLPKNLELQQHSKKRIMAPGSTIEQDTMSDTTIDQDIDL 209
            + + L  N  +   S         T      ++ T+DQ ++L
Sbjct: 193 NLHKTL--NSPVGGASLSGGGDTPKTTSSQIFNEDTLDQFLEL 222

[Close]

BLAST of CmoCh19G002120 vs. ExPASy Swiss-Prot
Match: Q93VY3 (NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-06
Identity = 60/203 (29.56%), Postives = 88/203 (43.35%), Query Frame = 0


Query: 9   LPVGVKFKPTDQQLL-QYLNFKIHGLPYFKGAVLDCDLYGEMEPWEIWLRFGGINGE-DL 68
           LP G +F PTD++LL QYL  K+ G  +    + D DLY + +PW+  L    + GE + 
Sbjct: 14  LPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLY-KFDPWD--LPSKALFGEKEW 73

Query: 69  YFFTKLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIGYCKCFRYEN 128
           YFF+   R   N     +  NR  G  +G W        I A   D + +G  K   +  
Sbjct: 74  YFFSPRDRKYPN----GSRPNRVAG--SGYWKATGTDKIITA---DGRRVGIKKALVFYA 133

Query: 129 IQLPE-HHGEWFMHEYSL--HQDSIHQVVDSDYVLCRLSKNERVERK---LPKNLELQQH 188
            + P+     W MHEY L  H  S       D+VLCR+ K     ++    P     ++H
Sbjct: 134 GKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAVTPVQACREEH 193

Query: 189 SKKRIMAPGSTIEQDTMSDTTID 204
           S       GS+    +  D  +D
Sbjct: 194 STN-----GSSSSSSSQLDDVLD 199

[Close]

BLAST of CmoCh19G002120 vs. ExPASy Swiss-Prot
Match: K4BNG7 (NAC domain-containing protein 2 OS=Solanum lycopersicum OX=4081 GN=NAP2 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.3e-06
Identity = 49/205 (23.90%), Postives = 87/205 (42.44%), Query Frame = 0


Query: 5   NRSLLPVGVKFKPTDQQLLQ-YLNFKIHGLPYFKGAVLDCDLYGEMEPWEI--WLRFGGI 64
           N + LP G +F PTD++L+  YL  +    P     + + D+Y + +PWE+     FG  
Sbjct: 6   NSNHLPPGFRFHPTDEELIMYYLRNQATSKPCPSSIIPEVDVY-KFDPWELPEKTEFG-- 65

Query: 65  NGEDLYFFTKLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIGYCKC 124
             ++ YFFT   R   N       +       +G W        I++     + +G  K 
Sbjct: 66  -EKEWYFFTPRDRKYPN------GVRPNRAAVSGYWKATGTDKGIYS---GTKYVGIKKA 125

Query: 125 FRYENIQLPEH-HGEWFMHEYSLHQDSIHQVVDS------DYVLCRLSKNERVERKLPKN 184
             +   + P+    +W MHEY L +        +      D+VLCR+ K + +ER +   
Sbjct: 126 LVFYKGKPPKGIKTDWIMHEYRLSESRTQPTRPNGSMRLDDWVLCRIYKKKNLERAIEMM 185

Query: 185 LELQQHSKKRIMAPGSTIEQDTMSD 200
              +   + +IM+  + I +   S+
Sbjct: 186 KVEEDTQEPQIMSVTNPIHEVVASN 197

[Close]

BLAST of CmoCh19G002120 vs. ExPASy Swiss-Prot
Match: Q5Z6B6 (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC076 PE=2 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 7.3e-06
Identity = 49/170 (28.82%), Postives = 75/170 (44.12%), Query Frame = 0


Query: 9   LPVGVKFKPTDQQLL-QYLNFKIHGLPYFKGAVLDCDLYGEMEPWEI--WLRFGGINGED 68
           +P G +F PTD++LL  YL  K+         + + DL  ++EPW++    R G     +
Sbjct: 10  VPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDL-NKLEPWDLKDRCRIGTGPQNE 69

Query: 69  LYFFT-KLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIGYCKCFRY 128
            YFF+ K K+            NR      G W        IF     +  IG  K   +
Sbjct: 70  WYFFSHKDKKYPTG-----TRTNR--ATTAGFWKATGRDKAIFLANACR--IGMRKTLVF 129

Query: 129 ENIQLPEHHG---EWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERVERKL 172
              + P  HG   +W MHEY L QD++  V +  +V+CR+   +  +R L
Sbjct: 130 YVGRAP--HGKKTDWIMHEYRLDQDNV-DVQEDGWVVCRVFMKKSYQRGL 166

[Close]

BLAST of CmoCh19G002120 vs. ExPASy TrEMBL
Match: A0A6J1HXC3 (NAC transcription factor 25-like OS=Cucurbita maxima OX=3661 GN=LOC111467099 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.0e-100
Identity = 177/208 (85.10%), Postives = 188/208 (90.38%), Query Frame = 0


Query: 1   MDSRNRSLLPVGVKFKPTDQQLLQYLNFKIHGLPYFKGAVLDCDLYGEMEPWEIWLRFGG 60
           MDSRN SLLPVGV+F+PTD QLL+YLNFKIHGLPYFKGAVLD DLYGEMEPWEIWLRFGG
Sbjct: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60

Query: 61  INGEDLYFFTKLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIGYCK 120
           I GE LYFFTKLKR TNN   L AHINRK+GLANGTWSGEN  +PIFATK DKQIIGYCK
Sbjct: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120

Query: 121 CFRYENIQLPEHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERVERKLPKNLELQQH 180
           CFRYENIQLP+HHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSK+ R++RKLPKNLELQQH
Sbjct: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180

Query: 181 SKKRIMAPGSTIEQDTMSDTTIDQDIDL 209
           SKKRI AP STI QD MS+ TIDQD +L
Sbjct: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 208

[Close]

BLAST of CmoCh19G002120 vs. ExPASy TrEMBL
Match: A0A6J1HJD2 (uncharacterized protein LOC111464082 OS=Cucurbita moschata OX=3662 GN=LOC111464082 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.9e-82
Identity = 148/160 (92.50%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 49  MEPWEIWLRFGGINGEDLYFFTKLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFA 108
           MEPWEIWLRFGGINGEDLYFFTKLKRLTNN EHLWA+INRKIGLANGTWSGEN A+PIFA
Sbjct: 1   MEPWEIWLRFGGINGEDLYFFTKLKRLTNNSEHLWAYINRKIGLANGTWSGENSASPIFA 60

Query: 109 TKIDKQIIGYCKCFRYENIQLPEHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERVE 168
           TK DKQIIGY KCFRYEN+QLPEHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERVE
Sbjct: 61  TKTDKQIIGYFKCFRYENVQLPEHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERVE 120

Query: 169 RKLPKNLELQQHSKKRIMAPGSTIEQDTMSDTTIDQDIDL 209
           RKLPKNLELQQHSKKRI APGSTI QDTMSD TIDQD +L
Sbjct: 121 RKLPKNLELQQHSKKRITAPGSTIGQDTMSDVTIDQDFNL 160

[Close]

BLAST of CmoCh19G002120 vs. ExPASy TrEMBL
Match: A0A6J1HSR6 (NAC domain-containing protein 72-like OS=Cucurbita maxima OX=3661 GN=LOC111467095 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 8.4e-82
Identity = 146/185 (78.92%), Postives = 159/185 (85.95%), Query Frame = 0


Query: 1   MDSRNRSLLPVGVKFKPTDQQLLQYLNFKIHGLPYFKGAVLDCDLYGEMEPWEIWLRFGG 60
           MDS +  LLPVGV+FKPTD QLLQYL++KIHG PYFK AVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  INGEDLYFFTKLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIGYCK 120
           I+GE LYFFTKLKR TNN   L AHINRK+GLANGTWSGEN A+PIFATK D  IIGYCK
Sbjct: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120

Query: 121 CFRYENIQLPEHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERVERKLPKNLELQQH 180
            FRYEN+QLPE HGEW MHEYSLHQDSI Q VD DYVLCR  KNER++RKL K+LE QQH
Sbjct: 121 RFRYENVQLPERHGEWIMHEYSLHQDSIQQAVDLDYVLCRFKKNERLKRKLQKDLEEQQH 180

Query: 181 SKKRI 186
           SK+R+
Sbjct: 181 SKRRM 185

[Close]

BLAST of CmoCh19G002120 vs. ExPASy TrEMBL
Match: A0A6J1HH13 (NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111463973 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.5e-81
Identity = 147/185 (79.46%), Postives = 158/185 (85.41%), Query Frame = 0


Query: 1   MDSRNRSLLPVGVKFKPTDQQLLQYLNFKIHGLPYFKGAVLDCDLYGEMEPWEIWLRFGG 60
           MDS +  LLPVGV+F+PTDQQLLQYL +KIHG PYFK AVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFRPTDQQLLQYLIWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  INGEDLYFFTKLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIGYCK 120
            +GEDLYFFTKLKR TNN   L AHINRK+GLANGTWSGEN A+ IFATK DK IIGYCK
Sbjct: 61  TDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASSIFATKTDKTIIGYCK 120

Query: 121 CFRYENIQLPEHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERVERKLPKNLELQQH 180
            FRYEN QLPEHHGEW MHEYSLHQDSI Q VDS+YVLCR  KNER +RKL K+LE QQ 
Sbjct: 121 RFRYENAQLPEHHGEWIMHEYSLHQDSIQQAVDSNYVLCRFKKNERFKRKLQKDLEEQQL 180

Query: 181 SKKRI 186
           SKKR+
Sbjct: 181 SKKRM 185

[Close]

BLAST of CmoCh19G002120 vs. ExPASy TrEMBL
Match: A0A6J1HIZ2 (NAC transcription factor 25-like OS=Cucurbita moschata OX=3662 GN=LOC111463972 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.0e-67
Identity = 126/171 (73.68%), Postives = 137/171 (80.12%), Query Frame = 0


Query: 1   MDSRNRSLLPVGVKFKPTDQQLLQYLNFKIHGLPYFKGAVLDCDLYGEMEPWEIWLRFGG 60
           MDS +R LLPVGV+F+PTDQQLLQYL +KIH  PYFK AVLDCDLYG+MEPWEIWLRFGG
Sbjct: 1   MDSHDRPLLPVGVRFRPTDQQLLQYLLWKIHDQPYFKRAVLDCDLYGDMEPWEIWLRFGG 60

Query: 61  INGEDLYFFTKLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIGYCK 120
            +GE+LYFFTKLKR TNN   L  HINRK+GL NGTWSGEN ANPIFA K DK IIGYCK
Sbjct: 61  TDGENLYFFTKLKRSTNNSGRLSVHINRKVGLTNGTWSGENSANPIFAAKTDKTIIGYCK 120

Query: 121 CFRYENIQLPEHHGEWFMHEYSLHQDSIHQVVD------SDYVLCRL-SKN 165
            FRYEN QLPEHHGEW MHEYSLHQDSI Q  +      +DY+   L SKN
Sbjct: 121 RFRYENAQLPEHHGEWIMHEYSLHQDSIQQANEPEALAIADYLFIGLGSKN 171

[Close]

BLAST of CmoCh19G002120 vs. TAIR 10
Match: AT1G71930.1 (vascular related NAC-domain protein 7 )

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-11
Identity = 47/164 (28.66%), Postives = 74/164 (45.12%), Query Frame = 0


Query: 1   MDSRNRSLLPVGVKFKPTDQQLL-QYLNFKIHGLPYFKGAVLDCDLYGEMEPWEIWLR-- 60
           MD+  +S +P G +F PT+++L+  YL+ KI+ +      +++ DLY +MEPW+I  R  
Sbjct: 1   MDNIMQSSMPPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLY-KMEPWDIQARCK 60

Query: 61  FGGINGEDLYFFTKLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIG 120
            G     + YFF+   R            NR    A G W        + +      +IG
Sbjct: 61  LGYEEQNEWYFFSHKDRKYPT----GTRTNR--ATAAGFWKATGRDKAVLS---KNSVIG 120

Query: 121 YCKCFRYENIQLPE-HHGEWFMHEYSLHQDSIHQVVDSDYVLCR 161
             K   Y   + P     +W MHEY L    +  V +  +V+CR
Sbjct: 121 MRKTLVYYKGRAPNGRKSDWIMHEYRLQNSELAPVQEEGWVVCR 154

[Close]

BLAST of CmoCh19G002120 vs. TAIR 10
Match: AT2G24430.1 (NAC domain containing protein 38 )

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 50/172 (29.07%), Postives = 76/172 (44.19%), Query Frame = 0


Query: 4   RNRSLLPVGVKFKPTDQQLLQ-YLNFKIHGLPYFKGAVLDCDLYGEMEPWEIWLRFGGIN 63
           +    LP G +F PTD++L+  YL  KI    +   A+ D DL  + EPWE+  +   + 
Sbjct: 11  KEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDL-NKSEPWELPEK-AKMG 70

Query: 64  GEDLYFFTKLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIGYCKCF 123
           G++ YFF+    L +         NR      G W        IF      +++G  K  
Sbjct: 71  GKEWYFFS----LRDRKYPTGVRTNRATN--TGYWKTTGKDKEIF-NSTTSELVGMKKTL 130

Query: 124 RYENIQLPEHHGE---WFMHEYSLHQDSIHQVVDSD-YVLCRLSKNERVERK 171
            +   + P   GE   W MHEY LH  S ++    D +V+CR+ K     +K
Sbjct: 131 VFYRGRAP--RGEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKK 171

[Close]

BLAST of CmoCh19G002120 vs. TAIR 10
Match: AT2G24430.2 (NAC domain containing protein 38 )

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 50/172 (29.07%), Postives = 76/172 (44.19%), Query Frame = 0


Query: 4   RNRSLLPVGVKFKPTDQQLLQ-YLNFKIHGLPYFKGAVLDCDLYGEMEPWEIWLRFGGIN 63
           +    LP G +F PTD++L+  YL  KI    +   A+ D DL  + EPWE+  +   + 
Sbjct: 11  KEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDL-NKSEPWELPEK-AKMG 70

Query: 64  GEDLYFFTKLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIGYCKCF 123
           G++ YFF+    L +         NR      G W        IF      +++G  K  
Sbjct: 71  GKEWYFFS----LRDRKYPTGVRTNRATN--TGYWKTTGKDKEIF-NSTTSELVGMKKTL 130

Query: 124 RYENIQLPEHHGE---WFMHEYSLHQDSIHQVVDSD-YVLCRLSKNERVERK 171
            +   + P   GE   W MHEY LH  S ++    D +V+CR+ K     +K
Sbjct: 131 VFYRGRAP--RGEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKK 171

[Close]

BLAST of CmoCh19G002120 vs. TAIR 10
Match: AT5G46590.1 (NAC domain containing protein 96 )

HSP 1 Score: 58.5 bits (140), Expect = 7.2e-09
Identity = 54/178 (30.34%), Postives = 77/178 (43.26%), Query Frame = 0


Query: 7   SLLPVGVKFKPTDQQLLQ-YLNFKIHGLPYFKGAVLDCDLYGEMEPWEIWLR-FGGINGE 66
           S LP G +F PTD++L++ YL  K+ GL      +   DLY   +PWE+  + F      
Sbjct: 4   SCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLY-SFDPWELPDKSFLPNRDM 63

Query: 67  DLYFF-TKLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIGYCKCFR 126
           + YFF ++ K+  N         NR  G   G W        I  T     IIGY K   
Sbjct: 64  EWYFFCSRDKKYPNG-----FRTNR--GTKAGYWKATGKDRKI--TSRSSSIIGYRKTLV 123

Query: 127 YENIQLP-EHHGEWFMHEYSLHQDSI---HQVVDSDYVLCRLSKNERVE-----RKLP 173
           +   + P      W MHEY L  D      Q +   +VLCR++    ++     RK+P
Sbjct: 124 FYKGRAPLGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNEIKTNTKIRKIP 171

[Close]

BLAST of CmoCh19G002120 vs. TAIR 10
Match: AT2G46770.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 2.7e-08
Identity = 58/223 (26.01%), Postives = 97/223 (43.50%), Query Frame = 0


Query: 6   RSLLPVGVKFKPTDQQLLQ-YLNFKIHGLPYFKGAVLDCDLYGEMEPWEI--WLRFGGIN 65
           +S +P G +F PT+++LLQ YL  K++ +      + D DL  ++EPW+I    + G   
Sbjct: 13  QSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDL-NKLEPWDIQEMCKIGTTP 72

Query: 66  GEDLYFFT-KLKRLTNNCEHLWAHINRKIGLANGTWSGENLANPIFATKIDKQIIGYCKC 125
             D YFF+ K K+            NR    A G W        I++   + + IG  K 
Sbjct: 73  QNDWYFFSHKDKKYPTG-----TRTNR--ATAAGFWKATGRDKIIYS---NGRRIGMRKT 132

Query: 126 FRYENIQLPE-HHGEWFMHEYSLHQD-------SIHQVV--------DSDYVLCRLSKNE 185
             +   + P     +W MHEY L  +       ++H+VV        D  +V+CR+ K +
Sbjct: 133 LVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKK 192

Query: 186 RVERKLPKNLELQQHSKKRIMAPGSTIEQDTMSDTTIDQDIDL 209
            + + L  N  +   S         T      ++ T+DQ ++L
Sbjct: 193 NLHKTL--NSPVGGASLSGGGDTPKTTSSQIFNEDTLDQFLEL 222

The following BLAST results are available for this feature:

BLAST of CmoCh19G002120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8W9	4.9e-10	28.66	NAC domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=NAC030 PE=1 ...	[more]
Q84WP6	3.9e-07	26.01	NAC domain-containing protein 43 OS=Arabidopsis thaliana OX=3702 GN=NAC043 PE=2 ...	[more]
Q93VY3	1.9e-06	29.56	NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 ...	[more]
K4BNG7	4.3e-06	23.90	NAC domain-containing protein 2 OS=Solanum lycopersicum OX=4081 GN=NAP2 PE=2 SV=...	[more]
Q5Z6B6	7.3e-06	28.82	NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC...	[more]

BLAST of CmoCh19G002120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HXC3	9.0e-100	85.10	NAC transcription factor 25-like OS=Cucurbita maxima OX=3661 GN=LOC111467099 PE=...	[more]
A0A6J1HJD2	2.9e-82	92.50	uncharacterized protein LOC111464082 OS=Cucurbita moschata OX=3662 GN=LOC1114640...	[more]
A0A6J1HSR6	8.4e-82	78.92	NAC domain-containing protein 72-like OS=Cucurbita maxima OX=3661 GN=LOC11146709...	[more]
A0A6J1HH13	5.5e-81	79.46	NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A6J1HIZ2	2.0e-67	73.68	NAC transcription factor 25-like OS=Cucurbita moschata OX=3662 GN=LOC111463972 P...	[more]

BLAST of CmoCh19G002120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71930.1	3.5e-11	28.66	vascular related NAC-domain protein 7	[more]
AT2G24430.1	1.1e-09	29.07	NAC domain containing protein 38	[more]
AT2G24430.2	1.1e-09	29.07	NAC domain containing protein 38	[more]
AT5G46590.1	7.2e-09	30.34	NAC domain containing protein 96	[more]
AT2G46770.1	2.7e-08	26.01	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 10..143 e-value: 7.9E-16 score: 59.1
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 9..164 score: 21.234875
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 18..168 e-value: 2.2E-22 score: 81.5
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 4..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..208
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 9..200
None	No IPR available	PANTHER	PTHR31989:SF220	NAC TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 9..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G002120.1	CmoCh19G002120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding