CmoCh18G008110 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAACATCACAGGTTAGGTTATTAGGTCATACGAACACCCATAATTTCGACATGTTATACTATTCGTTCAACGTTTTAGTGTTTTTATTTTATTTTATTTTAATTTCAAGAATAATTTTGAATATATATTTTTTTAAATGAAGGAAAAAATTTAAAGGTATTTTAATAATTTTCCAATTATTTTTTTTGTAAATTTGGAAAGAGGTAATTTATTTTGTTGAGTGGGGCAAAAATGTAATTGCAATTATTTGTGGATTAGGCGAGGGAGTTTGATCTGACATCCAACAAACACACAGCGAATGGCGTCTTTAAATTTGAAATTACGACAACCGACAGCTCCATTCCCACGTCGTACAAAGTCCGACATGTCGTACACCATTAGATTTATAACCACGTGCTTCTTTCTCTCTTTTTTAACTCAAGATAATAAAAACAATATGGATAAGGAATAAATTAAAGCGTACACTCTGATACCAAATGATATGAAATCAACCTAAGAAAAAACTCTGATACTAAATGATAGGTAGGATTCAGATTACGCGTTGTTCATCGAATATCTCAAGACAAAAATACTTGTTTAAGATTCGAATAACTTAACAAGCAAGATCGATCACGTCTAACTCGAATGATTCGAAAAATATAATTTAAACTACCTATAATTGCAAAGAAACGAGCTCTTGGCGAAAGAAAGAGGTAAGAAAAATATCTCGATTATCTTGTTGATCAGATGTCGTAAGACAATAACACTAGATTGAGATTCGAATCACTCCATAAGAAAGATCGATCATGTCAAATTTGAATGATTCTAACCATGCAATCTAAACGACATAAAATTGGAAAAAAATGAAAAAAAAAATATTTTTACTATTTTTTTTTAAAGTATGAGTTTATATAGTCTCAAAATCAAAATGAAAACCAGTGTTCTCAGTATTTTTTTAATATTTTTAAATTAAATTATTTTTAAAAAGCACACAAATTACATTAAATAAACTCGGCCCATTGGGCCGTTATATGTTTGTTGGGCCCAATTTAGTAATGACTTGGCCCAATATGGCGACAATTAGAAGATCGAACTCTCATCACCGGACAGACTCCCTTCTGCAGACTTCCGAGCATCGGAGCTCTGCGACTACGGGCAGCGCCGTTTTCCTACATTTTCACCGGCTGATCTGTTCGTAATCTACGACGATCCGGGGAGAATTTTTTTTTTTCTAGGTAGGCTTTAGCTTTGCGATCAACATGAACACAACCCTAATTCTTCTCCATTTCTTCAACGATTATTGTAACCCTTAATTAGCGCTTCGATTTTGTTTTTCTTCCTCCATTGTATGTGAACTCTGATTCATGTCTGTTTTCTTGTTTTTTTAGGTCTTGAATGTTTTCCTGGGATTGCTTACTCGTTCTATTTTCAGGTGGTTTTTAACTTATACATTACAATGACTCGAGTTTACATTGGTAATCTGGATCCACGCGTTTCAGAGAGGGATCTTGAAGATGAATTTCGAATGTTCGGTGTTCTTAGGAGGTGATTTCCGTTTGAAATTAGAGGCAGCCTTCATATATATGTCTTAAATTGAAACATTTTGGACGAGATATTTACCGAATCGGTTGAAATGGGAAATATTCATGGGTTCTTTCTGTATTGTACATAGTTTTTTTATGGCGCTAAGCTATCTATCCATGGCGTTTTCACATGGCCAAAGTTAGATATTCTGGCACTGGGCAGGGGATGAAGAAAGCCTTACTCATTGAATTTCATAGTGTTTGTTCTTAATCTGAGTACTATTGAAGTTGGCTGGTTTCAGCCTGTCAGCAATGGGAGTTCAGTAGTTGGGCTTTGCTTTTTACTTAAGACCCTTATCTTCCTTCTCGTCAGTACTATTTGTTTATGAAACTGAGACAAACTCTTTGAGATATGTCCTCTAAAGTTTGCTGATGGCTATCCTTGAGATCGGTGGAGCCAATGTGCATGCCTCATATATTACCTCGACAGAATGCCAGATGTTCTACGGTCTATTTCGTTGGTAGAATGGAAAGAATTAGGCGAAGAGGGACCAGTGGGTAATGAATGGGAAGATCGAAAAGTTGGAAGAAAAAAGGAATTTTTGGTTAGACGTATGGAATTAGCTAAGCATTTTATTCGAACAAATATAGAACCCGAATGGATGGTTTTATGTCTATTACCTGTTCTTCCTCCCGAGTTGAGTCTGATCATTCAGATATGCTTCATGGACATTTATTTCGTAATTGCATATAAACTATTAAGATGAGCTAGCTTTAATTTGAAAGAATATATATGTTCCCTTGTTTCTTGGTCTTAAGCTGCATTCTGAATTATTGGTCTTTGAATAAAATAATGCAGTGTGTGGGTTGCTAGAAGGCCTCCAGGATATGCATTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAGGCATTGGATGGTCAGTTTTAAAATATATTTCTTGTACTTGTTGCTATCAAGTTGTGCCTTTCATTCCTTCTATCAAATGATATTTGTTTTCATATGTATATATATGCAGCCTTTTCTTGTATTATCAATCTACTTTCATTACGTATTTTTTCCTCAGCTTTATCTGCCATCTAGTTTTCATTGGCGCAGTGAACTAAAAATTTATAATAGATCTAGTTTAATATCAACGTGACCGCAAAACTGAACTAAATCTTGGAAATTATAGTCGATCCTTAATCCAAGTCAAATGTGATCGTTTTCTGTAAGTTCCTAGGGCTTATAGGATGACCCCTTATCCTTCATTCTTATTTTTATTTCCTTGAGTTAAGTCTATCTTATCTTTTATGTGTGATTTTTTTGGGTTCTTATAATAGGGAAAAATGGTTGGCGTGTGGAGCTTTCTCACAACTCCAAAGGCGGGGGAGGTGGTGGTGGTGGTCGTTGTGGCCGTGGTGGTGGTGGTGGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAACCTGGTCATTTTGCTCGAGAGTGTCGTTCCCGTGGGGGCTCACGAGGCATTGGAGGTGGCTTGCGTCGTAGTCCTTCTCCTCGGCGCCGCAGGAGTCCAAGTTATGAAAGATATGGTCGCAGGTGCATCAAAGCTTTGTTTGTGTTTTTAAACACACCGAGTTATCTAAACCAACAAGTGGTTTCATATAAAGTTTAGGTTTTGATGTTTTATCACACTTTTACCTTTTCCCTTTTCCATGTAGGAGTAACAGTCCTCGTGGTAAAAGATCTCCACGACGTCGCAGCATTACACCTCCTAAGCGTGGTCGAAGCTACAGCAGATCTCCTCCACTCCGTCATGCTCGCCATGCTTCACCTTATGCTAACGGGTATGCCTTATTCCTAATAAATGAAAACTATTCACTAAAACTAACTTAATTGCCTTAATTGGGTGTTTTTGTTCACATTAGCCTTCGGTAATTATTGGGAATTAGTGCAGTAGACCAAAGCTATCTTTGGGGCCTATTACGTCTCCCAAAATTAAGTGTGAAATGACTCTCTACTACTAATTAATGTCAACACATACTTGATTGAGCAATATATTCCATAACTTCTTTAGATACAAATGCATCCATCTTAGAGCTGCATGATTATCATTATCGCAGAGATTGATCCTGGAATCAAGGATGATGCTGTGCTGGTAGAACTTAGATGATGGTGTTTCTGCTATACTGTAGTTCTATTAGGAATTGTGGAATGAGGCGGAATCATGTAGTTAAGTTCGTCTTTGACAATTGGTTCTCTTTGAAACCTGGATTTGGATGGATGTCTACCAAGTGTTTTAAGCCACCAAATGGCGTTCTGTCTGGAACCGTTTTGTGTTGGCTCTCTTCTAGACCCGCTGAAACTCGGAGGTCGCGTTCTTGCTTTCAAAATGATATCTATTCCCTAGAATTTTATACATACCTCTCTCTATATGTTTATTAGTGTTTCTTTTTCATTGGATGTCCCCAAAGATTTATCTGTTGGCTGTTTTTTTTTTTTTTTTGAGGTGTGATTTTCGGCATAAATCGCATCGTTACTCAGCTACCTGCATCTTTATGCATCACGGTTCTCAATATCTGCTCTGCTCCTCAATCATCTTCTTGTTACTGCAACTGGTTGCATGCTGTTTGTATTGCACTCTTACTGCAAGAAGGCTGCCTATATAGTTAATCCTTTTTAGCTGGTTGAAGACGATGAAGCTGTTTTCTTGTGATTTTCTGCTCATCATCTTCTTGTCTTCAATTGCATGCACGTAGCTATCGTGAGCGATTCTACTCGTTTTATAACATTGGCATCTTGTGAGCTTCAACTTGTTTCTTGCTTCCACAACTTCTGCCTTGCTCCTTCAATTGCACTTCATAAGTTGGAGACCAACCTCCAGTGATTTGCTTTTAGATGGTGAGGCAGCTATCTTCTTGGTTCCCGGCTCTGTTGTATGTTTAACCCTCATTTGTTCTTGGTTAGAAGGTCGAGGTGGGAATTGGAATGCTTATTCATATTCTTTGACTGTCTGTTCTTTGTTCTTTGCGTACATAAACTTGCCAAACTGACATAAACAAAGCAGACATAAGAAACATTGTTATTTTGGATCATTTATCTGTTTGGTTTTGGATATCGTGTAAGTTTTAATTTTAATTTGTTCTTGATGTTCTAATATGTATTGTTGTTTACATCATTGGGAGTTCAACA ATGTGGAACATCACAGACTTCCGAGCATCGGAGCTCTGCGACTACGGGCAGCGCCGTTTTCCTACATTTTCACCGGCTGATCTGTTCGTAATCTACGACGATCCGGGGAGAATTTTTTTTTTTCTAGGTCTTGAATGTTTTCCTGGGATTGCTTACTCGTTCTATTTTCAGGTGGTTTTTAACTTATACATTACAATGACTCGAGTTTACATTGGTAATCTGGATCCACGCGTTTCAGAGAGGGATCTTGAAGATGAATTTCGAATGTTCGGTGTTCTTAGGAGTGTGTGGGTTGCTAGAAGGCCTCCAGGATATGCATTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAGGCATTGGATGGGAAAAATGGTTGGCGTGTGGAGCTTTCTCACAACTCCAAAGGCGGGGGAGGTGGTGGTGGTGGTCGTTGTGGCCGTGGTGGTGGTGGTGGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAACCTGGTCATTTTGCTCGAGAGTGTCGTTCCCGTGGGGGCTCACGAGGCATTGGAGGTGGCTTGCGTCGTAGTCCTTCTCCTCGGCGCCGCAGGAGTCCAAGTTATGAAAGATATGGTCGCAGGAGTAACAGTCCTCGTGGTAAAAGATCTCCACGACGTCGCAGCATTACACCTCCTAAGCGTGGTCGAAGCTACAGCAGATCTCCTCCACTCCGTCATGCTCGCCATGCTTCACCTTATGCTAACGGAGATTGATCCTGGAATCAAGGATGATGCTGTGCTGGTAGAACTTAGATGATGGTGTTTCTGCTATACTGTAGTTCTATTAGGAATTGTGGAATGAGGCGGAATCATGTAGTTAAGTTCGTCTTTGACAATTGGTTCTCTTTGAAACCTGGATTTGGATGGATGTCTACCAAGTGTTTTAAGCCACCAAATGGCGTTCTGTCTGGAACCGTTTTGTGTTGGCTCTCTTCTAGACCCGCTGAAACTCGGAGGTCGCGTTCTTGCTTTCAAAATGATATCTATTCCCTAGAATTTTATACATACCTCTCTCTATATGTTTATTAGTGTTTCTTTTTCATTGGATGTCCCCAAAGATTTATCTGTTGGCTGTTTTTTTTTTTTTTTTGAGGTGTGATTTTCGGCATAAATCGCATCGTTACTCAGCTACCTGCATCTTTATGCATCACGGTTCTCAATATCTGCTCTGCTCCTCAATCATCTTCTTGTTACTGCAACTGGTTGCATGCTGTTTGTATTGCACTCTTACTGCAAGAAGGCTGCCTATATAGTTAATCCTTTTTAGCTGGTTGAAGACGATGAAGCTGTTTTCTTGTGATTTTCTGCTCATCATCTTCTTGTCTTCAATTGCATGCACGTAGCTATCGTGAGCGATTCTACTCGTTTTATAACATTGGCATCTTGTGAGCTTCAACTTGTTTCTTGCTTCCACAACTTCTGCCTTGCTCCTTCAATTGCACTTCATAAGTTGGAGACCAACCTCCAGTGATTTGCTTTTAGATGGTGAGGCAGCTATCTTCTTGGTTCCCGGCTCTGTTGTATGTTTAACCCTCATTTGTTCTTGGTTAGAAGGTCGAGGTGGGAATTGGAATGCTTATTCATATTCTTTGACTGTCTGTTCTTTGTTCTTTGCGTACATAAACTTGCCAAACTGACATAAACAAAGCAGACATAAGAAACATTGTTATTTTGGATCATTTATCTGTTTGGTTTTGGATATCGTGTAAGTTTTAATTTTAATTTGTTCTTGATGTTCTAATATGTATTGTTGTTTACATCATTGGGAGTTCAACA ATGTGGAACATCACAGACTTCCGAGCATCGGAGCTCTGCGACTACGGGCAGCGCCGTTTTCCTACATTTTCACCGGCTGATCTGTTCGTAATCTACGACGATCCGGGGAGAATTTTTTTTTTTCTAGGTCTTGAATGTTTTCCTGGGATTGCTTACTCGTTCTATTTTCAGGTGGTTTTTAACTTATACATTACAATGACTCGAGTTTACATTGGTAATCTGGATCCACGCGTTTCAGAGAGGGATCTTGAAGATGAATTTCGAATGTTCGGTGTTCTTAGGAGTGTGTGGGTTGCTAGAAGGCCTCCAGGATATGCATTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAGGCATTGGATGGGAAAAATGGTTGGCGTGTGGAGCTTTCTCACAACTCCAAAGGCGGGGGAGGTGGTGGTGGTGGTCGTTGTGGCCGTGGTGGTGGTGGTGGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAACCTGGTCATTTTGCTCGAGAGTGTCGTTCCCGTGGGGGCTCACGAGGCATTGGAGGTGGCTTGCGTCGTAGTCCTTCTCCTCGGCGCCGCAGGAGTCCAAGTTATGAAAGATATGGTCGCAGGAGTAACAGTCCTCGTGGTAAAAGATCTCCACGACGTCGCAGCATTACACCTCCTAAGCGTGGTCGAAGCTACAGCAGATCTCCTCCACTCCGTCATGCTCGCCATGCTTCACCTTATGCTAACGGAGATTGA MWNITDFRASELCDYGQRRFPTFSPADLFVIYDDPGRIFFFLGLECFPGIAYSFYFQVVFNLYITMTRVYIGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDGKNGWRVELSHNSKGGGGGGGGRCGRGGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGIGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPLRHARHASPYANGD Homology
BLAST of CmoCh18G008110 vs. ExPASy Swiss-Prot
Match: O81127 (Serine/arginine-rich splicing factor RSZ21 OS=Arabidopsis thaliana OX=3702 GN=RSZ21 PE=1 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.0e-62 Identity = 139/199 (69.85%), Postives = 150/199 (75.38%), Query Frame = 0
BLAST of CmoCh18G008110 vs. ExPASy Swiss-Prot
Match: Q9SJA6 (Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis thaliana OX=3702 GN=RSZ22A PE=1 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 3.4e-58 Identity = 130/192 (67.71%), Postives = 146/192 (76.04%), Query Frame = 0
BLAST of CmoCh18G008110 vs. ExPASy Swiss-Prot
Match: O81126 (Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis thaliana OX=3702 GN=RSZ22 PE=1 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 9.9e-58 Identity = 137/198 (69.19%), Postives = 152/198 (76.77%), Query Frame = 0
BLAST of CmoCh18G008110 vs. ExPASy Swiss-Prot
Match: Q69KL9 (Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica OX=39947 GN=RSZ21A PE=2 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 9.6e-53 Identity = 123/190 (64.74%), Postives = 137/190 (72.11%), Query Frame = 0
BLAST of CmoCh18G008110 vs. ExPASy Swiss-Prot
Match: Q6K4N0 (Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp. japonica OX=39947 GN=RSZP21 PE=2 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 3.6e-52 Identity = 120/189 (63.49%), Postives = 138/189 (73.02%), Query Frame = 0
BLAST of CmoCh18G008110 vs. ExPASy TrEMBL
Match: A0A6J1G1N9 (serine/arginine-rich splicing factor RSZ21-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449845 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 3.5e-98 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CmoCh18G008110 vs. ExPASy TrEMBL
Match: A0A1S3BEJ4 (serine/arginine-rich splicing factor RSZ21 OS=Cucumis melo OX=3656 GN=LOC103489020 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.9e-91 Identity = 178/187 (95.19%), Postives = 180/187 (96.26%), Query Frame = 0
BLAST of CmoCh18G008110 vs. ExPASy TrEMBL
Match: A0A5D3CUM7 (Serine/arginine-rich splicing factor RSZ21 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00890 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 9.2e-91 Identity = 177/186 (95.16%), Postives = 179/186 (96.24%), Query Frame = 0
BLAST of CmoCh18G008110 vs. ExPASy TrEMBL
Match: A0A6J1G1L4 (serine/arginine-rich splicing factor RSZ21-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449845 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 3.5e-90 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CmoCh18G008110 vs. ExPASy TrEMBL
Match: A0A6J1KZV2 (serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita maxima OX=3661 GN=LOC111497790 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.3e-89 Identity = 178/188 (94.68%), Postives = 180/188 (95.74%), Query Frame = 0
BLAST of CmoCh18G008110 vs. TAIR 10
Match: AT1G23860.1 (RS-containing zinc finger protein 21 ) HSP 1 Score: 240.0 bits (611), Expect = 2.1e-63 Identity = 139/199 (69.85%), Postives = 150/199 (75.38%), Query Frame = 0
BLAST of CmoCh18G008110 vs. TAIR 10
Match: AT1G23860.2 (RS-containing zinc finger protein 21 ) HSP 1 Score: 240.0 bits (611), Expect = 2.1e-63 Identity = 139/199 (69.85%), Postives = 150/199 (75.38%), Query Frame = 0
BLAST of CmoCh18G008110 vs. TAIR 10
Match: AT1G23860.4 (RS-containing zinc finger protein 21 ) HSP 1 Score: 233.0 bits (593), Expect = 2.6e-61 Identity = 136/199 (68.34%), Postives = 147/199 (73.87%), Query Frame = 0
BLAST of CmoCh18G008110 vs. TAIR 10
Match: AT2G24590.1 (RNA recognition motif and CCHC-type zinc finger domains containing protein ) HSP 1 Score: 226.5 bits (576), Expect = 2.4e-59 Identity = 130/192 (67.71%), Postives = 146/192 (76.04%), Query Frame = 0
BLAST of CmoCh18G008110 vs. TAIR 10
Match: AT4G31580.1 (serine/arginine-rich 22 ) HSP 1 Score: 224.9 bits (572), Expect = 7.0e-59 Identity = 137/198 (69.19%), Postives = 152/198 (76.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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