CmoCh17G012140 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCCAATTGCTTATGGCTTTGTTTCTGGCTCTTATGGCCACTCACGCCCTGGCTAGACCTACGCCACCCGACGCCACCTTCAATGACCAAAAGAACTTCCTTACCTACGGTGGCATTGGTAGCTACTCTGGCATTGGCAGCAACGGCCTCCCCTTCGGTGGCATTGGCGGTGCAGTCGGATCAGGCGGCGATCTCGGTGGTGGACTAGGCGGCCCTGCTGGAGGAATTGGTGGACTAGGTGGGTTGGGAGGAACCGGCGGTGGCATTGGAGGCGGAGCTGGCAGTGGTCTCGGTGGTGGCTCTGGTCTTACCAATCCCTGA ATGGCCCAATTGCTTATGGCTTTGTTTCTGGCTCTTATGGCCACTCACGCCCTGGCTAGACCTACGCCACCCGACGCCACCTTCAATGACCAAAAGAACTTCCTTACCTACGGTGGCATTGGTAGCTACTCTGGCATTGGCAGCAACGGCCTCCCCTTCGGTGGCATTGGCGGTGCAGTCGGATCAGGCGGCGATCTCGGTGGTGGACTAGGCGGCCCTGCTGGAGGAATTGGTGGACTAGGTGGGTTGGGAGGAACCGGCGGTGGCATTGGAGGCGGAGCTGGCAGTGGTCTCGGTGGTGGCTCTGGTCTTACCAATCCCTGA ATGGCCCAATTGCTTATGGCTTTGTTTCTGGCTCTTATGGCCACTCACGCCCTGGCTAGACCTACGCCACCCGACGCCACCTTCAATGACCAAAAGAACTTCCTTACCTACGGTGGCATTGGTAGCTACTCTGGCATTGGCAGCAACGGCCTCCCCTTCGGTGGCATTGGCGGTGCAGTCGGATCAGGCGGCGATCTCGGTGGTGGACTAGGCGGCCCTGCTGGAGGAATTGGTGGACTAGGTGGGTTGGGAGGAACCGGCGGTGGCATTGGAGGCGGAGCTGGCAGTGGTCTCGGTGGTGGCTCTGGTCTTACCAATCCCTGA MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGGGSGLTNP Homology
BLAST of CmoCh17G012140 vs. ExPASy TrEMBL
Match: A0A6J1GPC7 (glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111456299 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.3e-38 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CmoCh17G012140 vs. ExPASy TrEMBL
Match: A0A5A7U5T7 (Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00150 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.7e-22 Identity = 82/112 (73.21%), Postives = 89/112 (79.46%), Query Frame = 0
BLAST of CmoCh17G012140 vs. ExPASy TrEMBL
Match: A0A6J1KVV3 (acanthoscurrin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498068 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.5e-21 Identity = 77/103 (74.76%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of CmoCh17G012140 vs. ExPASy TrEMBL
Match: A0A1S3CFV5 (glycine-rich cell wall structural protein 1-like OS=Cucumis melo OX=3656 GN=LOC103500476 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.5e-21 Identity = 84/116 (72.41%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of CmoCh17G012140 vs. ExPASy TrEMBL
Match: A0A1S3CGR1 (acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 3.3e-21 Identity = 79/107 (73.83%), Postives = 85/107 (79.44%), Query Frame = 0
BLAST of CmoCh17G012140 vs. NCBI nr
Match: KAG6575963.1 (hypothetical protein SDJN03_26602, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 172.6 bits (436), Expect = 1.9e-39 Identity = 105/107 (98.13%), Postives = 106/107 (99.07%), Query Frame = 0
BLAST of CmoCh17G012140 vs. NCBI nr
Match: XP_023549421.1 (glycine-rich protein 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 170.2 bits (430), Expect = 9.4e-39 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of CmoCh17G012140 vs. NCBI nr
Match: XP_022953896.1 (glycine-rich protein 5-like [Cucurbita moschata]) HSP 1 Score: 168.7 bits (426), Expect = 2.7e-38 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CmoCh17G012140 vs. NCBI nr
Match: KAG7014487.1 (hypothetical protein SDJN02_24665, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 162.5 bits (410), Expect = 2.0e-36 Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of CmoCh17G012140 vs. NCBI nr
Match: XP_038899239.1 (glycine-rich protein 5-like [Benincasa hispida]) HSP 1 Score: 117.1 bits (292), Expect = 9.4e-23 Identity = 85/117 (72.65%), Postives = 93/117 (79.49%), Query Frame = 0
BLAST of CmoCh17G012140 vs. TAIR 10
Match: AT4G29030.1 (Putative membrane lipoprotein ) HSP 1 Score: 55.8 bits (133), Expect = 2.4e-08 Identity = 58/109 (53.21%), Postives = 67/109 (61.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|