CmoCh17G003960 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTTGGTCCAGCTTCAACAATTTGAACCTCTTCTGGACGCAACCTCCCTACTAACTCAAATTTCTAAGGACGCCGACGTGAGATTCACCGCGTTTATGCTCTCGTTAATTGCCTCGCACACTTCCCCTCGCTTCGTCGCAACGCTGCAAATGTCGTGCCGATTGTTCACCAACTACTCCGTCGACCATTATTACAGTTCGAAGGTTTCCCTCGAGTCCTTCCACGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGTCAATCCATGTTTTGGAATCAAGACAACAAATGATCCTTAGATATGAGAATCCATCAAGTTAGTATACAAGAAACAACAATCTTGTTTCTTTTGGTTTCAAGAACATAATTTCCTTCAAATTCTTTCAAGAAAATCACTTAAATTTCTTCATTATTTCCCTTTTAGGCAATGACCCACCATTGTATCTTGAATTGCCATTGTCACCACCACAAGCCGAGAGCTTAGGCCAAGTTGAATATGGCAAATTTTTCACTGTTAATTCTAAAGTGTTAAGGAAAATTATAAAAGAATTGCCTCTCTTCCACGATGATTTAGGTATCAATTCTCTCTCTCTCTTTTTTTTTTTTTTTCTTTCAAATTTGATTTTGTTTTTGATTTCGATACCTTGTTTATATGTCATAGTTCGTGTCGCTGCAACGAGTACTCGAGTCAAGTTCTCAATAGCATCTAAGGAGATTACTGTTACTAAAGAGGTATTATATTGTTCATGTTCATCTCAAAAGCTTACAATTTGAAAGAAATTAAGCAAAATAAAAGCTTTAAAATTGCTTGATTTTGAACAGAGTGGAAATTGTAGGATCGTAGGTTATGAAGGAGAAGATGAAACTGAGCTGCATATCACTTTTCGTCCCATGATGTTTTTCCTTAATTTTACGTATAAAGCGAATAGGGTTTGGTTTTATAAGACAACTAATTCTCAAAGTGTAATTAGTGTCCCAGCTTTTGGGATGTATGGTCAATATGTGGTCTATTTTCCCAAATTATGATCAAAATATTGAATACTCAAATGGCCGAAGATTTTGTTATGAATGTGAATTTCTTATAATGTATTTTGTCATTCTCACAAGTAGCATATTTACTAGGAGACGTCATATCGTAATTTTGTTATGAATTTCGAATACCTTACCCTTACCTCTCGAGCTCAACAAAACAAAGTTAATATGTGTGGTGCATATAAATAAACTGATACCACATCTGAATAAAAGTGGTATTATAAATATGAAAGTTAAGAAGTGCTTTTGAAAGTTACCATTTGTTAAAATAAAATGCATATTCCTTTCTGGTGTCTCGACCAGAGATTTTCTTTGAATAATTTTATACTTGGTGATTTCTAGTAAATTTTCTTAGTAACCGTGAGTGAGGCACAATATGCTGAAAGAATTTGTATTAATTTGTGAGGAAAGAATTTGTATTAATTTGTGAGGATAGTTTTTACTCGTGGATGCTGAAGGCAGGACCGTTCATGTATTAAGATGAAAAAAAAAAAAACTTGCTAGCAATACTTTTGGCTTTAGTTTTGTAGTGTTACGATATTGATAGACTTGACTTGTAAACTCTTTTGTAATAGTAATTGGTTGCCGCTCGTGGATGTAGGAAAATTTCTTCTCTTCAAATCTCGTAAATTTTTGTGTCGATTTGTTTATTTTTATTCGTGGGTGTATGATTGCGATCAATTTTGCTTTAGCTTCCGTTACAACAATGGCTATTATTCAAGGAAATATGAAAAGCAAATCCACATGTGAGCACGTCTAGTGGTCATGAAGTTAAGTCTTTCATAATATCCCAAATACCACAACTTGTACTCTAATACCACTTGTTGTGTCGTAACTTTCAATGCTGACATTTAATGCTTTAATACTCAATTGTTGTAGCCCAAATGGCACAATCAAAATGTTATGATACTCAATTGTTGTAGCCCAAATGCCACAACGAAAATGTTATGATACCTAATTGTTGTAGCAGAAGCGAAAGCAAGATCGATCACACTCACACACCCACTAACAAAAATTAAACAAAGAGACACAAAGATTTACGTGGTTTGGAGAAAAAAATTCTCTTACATCTACGAGTGGTAGCCAATTACTATAACAAAAGTGTTTATAAGCTTATCTCTCACACTCTCCCCCTACAAAAATTCTCTCAATTATCTTTAGGAAAATACAAGATGACAATGACTCCCCACCTAAAAAAAAAAAAAAAATGATAGACAAGCATTTATATAGACATAACAATACCGATTCTCAAACCAAATAAATGAGAATATGAAACAAAATGGTTATAAAAAAAAAAAAAGAGAGTTAGTAACCAAAATAAATGAGAATATGAAACAAAATAGTTATGAACTAAATGAGAATTTTGACAATATATCTTCATACACTAAGATGTGCCTATCATGTGAGCCTATCATGTGGGGATAATTAGGGGACTTGCTAACCCACCTCTAACCGTGAACGAATCTCGATTGACAAGAGTTTGCATTGCGATGTCAAAGATAATGCTATGAAACTTTTGGGATTTGATCTAATAACCCTGTTGAAAAACAAGGCCTTTAGATCTAAATTATTGAAAAACTCAAAAAACGACAAGATTCTACCTGAAGGAAAGTTTTGGAATAGATTACCTTGATGATCAAAATCGAGAGTAAAGCAAACTCGTTTCTAAACTTGTAATTCGAATAACTCTACAGGAGGTTTGTTCAATACCACTTGACTATAGCATGAAATTTTAAACACCGAATTTGCCAAAGAAAAAACTTAGCTTTCAACTAAACTAAAATAAAAACTCTATTTTTTTTCAGTTGCAAAATGTGATGTCGACCATAAGAGAAGGCTTTACATAGCTTTTGAGGATTACATTATAACCGAACTCCCATATTAAAACCTAATCTAAATAAAAATTAAAATAATGCAATAAAACAAATGTGTTATATCGAGTAACCATCTTTGTACTAAAATTCATAAATTCAACTATGAGTTCATTAAATGTAAATTAAAATGCATCTAATGCATCTCTATTTTGAAACTCAACTTTGTACAATAGGTAGGGAAAGATTCCAACATCTTCTAGAATTTCCTTTAACGAGTCCATCATAGCTTGAATACAAGTGACTAAAGCTCGTTGTAACTTCTTTACTTTTGTCCTTGTAATTCGGCCTTGAGGTATGAAAATTCCTCGATCTTGATTCATATCAGACGGAGTCACTTTTTATAATTTACTGAACGATGCATGGACTATTAGGAGTAGCCAGCTAATCGATAGAAATCTATATGGATGAGCAAGAGTTGGTATCAATAGGATGGTGCCCTGAATATAAAATGATCCATAGACCAGAAGATTTGTTCTACCTTACCCATTTATCATGTTGATCTTCGGCCTTAAACACATCCATCGGTTCTTTAGGGCATGTTGTCTACTCACTCAACTTAATGAAACAGCCCACGTTGAATTCTCGAGATCCATGTTCTCAATCAAAGTCTCCTACTTTTCCCCTCACTTCGTAGCAGCATTAGGCTTCAAACCTTCGTTCTTTTTCTGTTACATCAATTCAGATACACAGCTTTGCACTCGGAGGATTCCACTCAAGAAATTCTGCCATTATTTGA ATGTTCTTGGTCCAGCTTCAACAATTTGAACCTCTTCTGGACGCAACCTCCCTACTAACTCAAATTTCTAAGGACGCCGACGTGAGATTCACCGCGTTTATGCTCTCGTTAATTGCCTCGCACACTTCCCCTCGCTTCGTCGCAACGCTGCAAATGTCGTGCCGATTGTTCACCAACTACTCCGTCGACCATTATTACAGTTCGAAGGTTTCCCTCGAGTCCTTCCACGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGTCAATCCATGTTTTGGAATCAAGACAACAAATGATCCTTAGATATGAGAATCCATCAAGCAATGACCCACCATTGTATCTTGAATTGCCATTGTCACCACCACAAGCCGAGAGCTTAGGCCAAGTTGAATATGGCAAATTTTTCACTGTTAATTCTAAAGTGTTAAGGAAAATTATAAAAGAATTGCCTCTCTTCCACGATGATTTAGTTCGTGTCGCTGCAACGAGTACTCGAGTCAAGTTCTCAATAGCATCTAAGGAGATTACTGTTACTAAAGAGATACACAGCTTTGCACTCGGAGGATTCCACTCAAGAAATTCTGCCATTATTTGA ATGTTCTTGGTCCAGCTTCAACAATTTGAACCTCTTCTGGACGCAACCTCCCTACTAACTCAAATTTCTAAGGACGCCGACGTGAGATTCACCGCGTTTATGCTCTCGTTAATTGCCTCGCACACTTCCCCTCGCTTCGTCGCAACGCTGCAAATGTCGTGCCGATTGTTCACCAACTACTCCGTCGACCATTATTACAGTTCGAAGGTTTCCCTCGAGTCCTTCCACGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGTCAATCCATGTTTTGGAATCAAGACAACAAATGATCCTTAGATATGAGAATCCATCAAGCAATGACCCACCATTGTATCTTGAATTGCCATTGTCACCACCACAAGCCGAGAGCTTAGGCCAAGTTGAATATGGCAAATTTTTCACTGTTAATTCTAAAGTGTTAAGGAAAATTATAAAAGAATTGCCTCTCTTCCACGATGATTTAGTTCGTGTCGCTGCAACGAGTACTCGAGTCAAGTTCTCAATAGCATCTAAGGAGATTACTGTTACTAAAGAGATACACAGCTTTGCACTCGGAGGATTCCACTCAAGAAATTCTGCCATTATTTGA MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNYSVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSNDPPLYLELPLSPPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTKEIHSFALGGFHSRNSAII Homology
BLAST of CmoCh17G003960 vs. ExPASy TrEMBL
Match: A0A1S3C8J1 (uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.9e-62 Identity = 127/181 (70.17%), Postives = 153/181 (84.53%), Query Frame = 0
BLAST of CmoCh17G003960 vs. ExPASy TrEMBL
Match: A0A5D3BTK3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00820 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 1.1e-49 Identity = 113/182 (62.09%), Postives = 134/182 (73.63%), Query Frame = 0
BLAST of CmoCh17G003960 vs. ExPASy TrEMBL
Match: A0A5D3DZ07 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1810G00070 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 5.8e-48 Identity = 114/189 (60.32%), Postives = 146/189 (77.25%), Query Frame = 0
BLAST of CmoCh17G003960 vs. ExPASy TrEMBL
Match: A0A1S4E4N8 (uncharacterized protein LOC103502263 OS=Cucumis melo OX=3656 GN=LOC103502263 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 5.8e-48 Identity = 102/181 (56.35%), Postives = 144/181 (79.56%), Query Frame = 0
BLAST of CmoCh17G003960 vs. ExPASy TrEMBL
Match: A0A1S3CL88 (uncharacterized protein LOC103502250 OS=Cucumis melo OX=3656 GN=LOC103502250 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 5.8e-48 Identity = 114/189 (60.32%), Postives = 146/189 (77.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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