Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTATTTTTCTTCTGCTAAAGTTACCAAGCTGTGAGATAGCAATGGGTGTTTTCACGTACGAAAATGAGGTGACCACCGTCATTCCTCCGGCCAAGTTCTTCAAGGCTTTTATTCTTGATGCCGACCGACTTTACCCCAAGATCGTGCCACATCAGCCCAAAACTGAAGTTGTCGAAGGAGATGGCGGTCCCGGAACTATCAAGATTATCACCTTCAGTCACGGTAATGTGAAATTAGCATCACTCACAATAATATACACTTAACTATCTAATTTTGTTTAATTTTTTATTTTATGTCTGAGAGTTAGACATTTTTATATATTTTTTAAAATTTACACTAATTTATTAAATACAAAATGAAAATTTTAAGATTTTATTAGATATAAAAATTAATTTTATCTCAAATAGGTCAATTAATTTAAAAAAATGTAAAATATGCTAAGAATTTGTTGTACACAAAATTTAAATTAAAAAAAAAAAGATATCTATTTAATATTTTTAAAATTTAAAAGTTTATTAGAAAAATGTGTTAGACATGACTTTAAATATATATATTTTTTATTTTTTTAAAAAAATTAAAGGCTTAAATTAAAAGAAAAACACCAAAGATGATAAATAAAACTTTTTTTAAAAATATCTATTTAACGTTTTTAAAGTTAAAAAATTTATTAGAAAAAAATGTGTTAGAGTCTTATGACTTTAAATAAATATTTTTATATTTAAAAAAAATTAAAAAAAACACTAAAGTGATGATAAATAAAACTTAAAAAAAAAAAGAGATCGAATAGACTAAAATAAATAATAATTAATTACATTTATAGCTTGGATTATAATTAGTCATAGTCATAAGCTAAAAATTGAAAAAAAAAAATGTATATATAAATATTTTTGCAGGCGAGCAAGTGAAATCCATAAAGCACAGGCTGGACGTAGTGGACGAAAAATCGTTGACTTACAAATACACGGTGTTAGAAGGGGAGATTTTATCAGACAATATAGACCAAATTTCAAAGGAATTGAAGGTAACGGCGGGACCTGACGGAGGATCCATTTTGAAGAGCGTAAGCATTTACCACACCAAAGGAGACCACCAAATCGACGAGCAGAAGCTCAAGATCGGCGAGGAAAAGGGATTGGGCCTTCTCAAAGCCGCCGAGGCCTACCTCCTGGCCAACCCTGCTGAATATAACTAAACCAAAAGTCAAAATATATTTTAAATAATATTAATATAAATAAATAAATATATAATTATATGTATGGATTTGAATTTTTATGTGTGTTTAAGCTTCTTATAATAAGGGTTTGATTGTAATTGTGCACGTGGGGGGTTTTTTTTTTATGCTTGTGAGTTGTGATTGTATTTTCAAAGGTG
mRNA sequence
TCTATTTTTCTTCTGCTAAAGTTACCAAGCTGTGAGATAGCAATGGGTGTTTTCACGTACGAAAATGAGGTGACCACCGTCATTCCTCCGGCCAAGTTCTTCAAGGCTTTTATTCTTGATGCCGACCGACTTTACCCCAAGATCGTGCCACATCAGCCCAAAACTGAAGTTGTCGAAGGAGATGGCGGTCCCGGAACTATCAAGATTATCACCTTCAGTCACGGCGAGCAAGTGAAATCCATAAAGCACAGGCTGGACGTAGTGGACGAAAAATCGTTGACTTACAAATACACGGTGTTAGAAGGGGAGATTTTATCAGACAATATAGACCAAATTTCAAAGGAATTGAAGGTAACGGCGGGACCTGACGGAGGATCCATTTTGAAGAGCGTAAGCATTTACCACACCAAAGGAGACCACCAAATCGACGAGCAGAAGCTCAAGATCGGCGAGGAAAAGGGATTGGGCCTTCTCAAAGCCGCCGAGGCCTACCTCCTGGCCAACCCTGCTGAATATAACTAAACCAAAAGTCAAAATATATTTTAAATAATATTAATATAAATAAATAAATATATAATTATATGTATGGATTTGAATTTTTATGTGTGTTTAAGCTTCTTATAATAAGGGTTTGATTGTAATTGTGCACGTGGGGGGTTTTTTTTTTATGCTTGTGAGTTGTGATTGTATTTTCAAAGGTG
Coding sequence (CDS)
ATGGGTGTTTTCACGTACGAAAATGAGGTGACCACCGTCATTCCTCCGGCCAAGTTCTTCAAGGCTTTTATTCTTGATGCCGACCGACTTTACCCCAAGATCGTGCCACATCAGCCCAAAACTGAAGTTGTCGAAGGAGATGGCGGTCCCGGAACTATCAAGATTATCACCTTCAGTCACGGCGAGCAAGTGAAATCCATAAAGCACAGGCTGGACGTAGTGGACGAAAAATCGTTGACTTACAAATACACGGTGTTAGAAGGGGAGATTTTATCAGACAATATAGACCAAATTTCAAAGGAATTGAAGGTAACGGCGGGACCTGACGGAGGATCCATTTTGAAGAGCGTAAGCATTTACCACACCAAAGGAGACCACCAAATCGACGAGCAGAAGCTCAAGATCGGCGAGGAAAAGGGATTGGGCCTTCTCAAAGCCGCCGAGGCCTACCTCCTGGCCAACCCTGCTGAATATAACTAA
Protein sequence
MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPKTEVVEGDGGPGTIKIITFSHGEQVKSIKHRLDVVDEKSLTYKYTVLEGEILSDNIDQISKELKVTAGPDGGSILKSVSIYHTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEYN
Homology
BLAST of CmoCh17G003370 vs. ExPASy Swiss-Prot
Match:
O50001 (Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1)
HSP 1 Score: 196.4 bits (498), Expect = 2.4e-49
Identity = 94/160 (58.75%), Postives = 120/160 (75.00%), Query Frame = 0
Query: 1 MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPK-TEVVEGDGGPGTIKIITFS 60
MGVFTYE E T+VIPP K FKAFILDAD L PK+ P K TE++EGDGG GTIK +TF
Sbjct: 1 MGVFTYETEFTSVIPPEKLFKAFILDADNLIPKVAPTAVKGTEILEGDGGVGTIKKVTFG 60
Query: 61 HGEQVKSIKHRLDVVDEKSLTYKYTVLEGEILSDNIDQISKELKVTAGPDGGSILKSVSI 120
G Q +KHR+D +D+ +L+Y YT++EG+ LSD I+ I+ ++K+ A PDGGSI+K+ S
Sbjct: 61 EGSQYAYVKHRVDGIDKDNLSYSYTLIEGDALSDVIENIAYDIKLVASPDGGSIVKTTSH 120
Query: 121 YHTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEYN 160
YHTKGD +I E+++K G+EK GL K EAYLLANP YN
Sbjct: 121 YHTKGDVEIKEEQVKAGKEKAAGLFKLVEAYLLANPDAYN 160
BLAST of CmoCh17G003370 vs. ExPASy Swiss-Prot
Match:
D0E0C6 (Major strawberry allergen Fra a 1-2 OS=Fragaria ananassa OX=3747 GN=FRAA2 PE=1 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 3.2e-46
Identity = 90/159 (56.60%), Postives = 114/159 (71.70%), Query Frame = 0
Query: 1 MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPK-TEVVEGDGGPGTIKIITFS 60
MGVFTYE E T+VIPP + FKAFILDAD L PKI P K E++EGDGG GTIK ITF
Sbjct: 1 MGVFTYETEFTSVIPPPRLFKAFILDADNLIPKIAPQAVKCAEIIEGDGGVGTIKKITFG 60
Query: 61 HGEQVKSIKHRLDVVDEKSLTYKYTVLEGEILSDNIDQISKELKVTAGPDGGSILKSVSI 120
G Q S+ H++D +D+++ Y Y+++EG+ LSD I++IS E K+ + DGGSI+KS S
Sbjct: 61 EGSQFGSVTHKIDGIDKENFVYSYSLIEGDALSDKIEKISYETKLVSSSDGGSIIKSTSN 120
Query: 121 YHTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEY 159
YHTKGD +I E+ +K G+EK L K E YLLANP EY
Sbjct: 121 YHTKGDVEIKEEHVKAGKEKASHLFKLVEGYLLANPNEY 159
BLAST of CmoCh17G003370 vs. ExPASy Swiss-Prot
Match:
A0A024B404 (Major strawberry allergen Fra a 1.05 OS=Fragaria ananassa OX=3747 GN=Fra a 1.05 PE=1 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 3.2e-46
Identity = 91/159 (57.23%), Postives = 113/159 (71.07%), Query Frame = 0
Query: 1 MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPK-TEVVEGDGGPGTIKIITFS 60
MGVFTYE E T+VIPP + FKAFILDAD L PKI P K E++EGDGG GTIK ITF
Sbjct: 1 MGVFTYETEFTSVIPPPRLFKAFILDADNLIPKIAPQAVKCAEIIEGDGGVGTIKKITFG 60
Query: 61 HGEQVKSIKHRLDVVDEKSLTYKYTVLEGEILSDNIDQISKELKVTAGPDGGSILKSVSI 120
G Q S+ H++D +D+ + Y Y+++EG+ LSD I++IS E K+ A DGGSI+KS S
Sbjct: 61 EGSQFGSVTHKIDGIDKDNFVYSYSLVEGDALSDKIEKISYETKLVASSDGGSIIKSTSN 120
Query: 121 YHTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEY 159
YHTKGD +I E+ +K G+EK L K E YLLANP EY
Sbjct: 121 YHTKGDVEIKEEHVKAGKEKASHLFKLVEGYLLANPNEY 159
BLAST of CmoCh17G003370 vs. ExPASy Swiss-Prot
Match:
A0A024B3G5 (Major strawberry allergen Fra a 1.06 OS=Fragaria ananassa OX=3747 GN=Fra a 1.06 PE=1 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 3.2e-46
Identity = 91/159 (57.23%), Postives = 114/159 (71.70%), Query Frame = 0
Query: 1 MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPK-TEVVEGDGGPGTIKIITFS 60
MGVFTYE E T+VIPP + FKAFILDAD L PKI P K E+VEGDGG GTIK ITF
Sbjct: 1 MGVFTYETEFTSVIPPPRLFKAFILDADNLIPKIAPQAVKCAEIVEGDGGVGTIKKITFG 60
Query: 61 HGEQVKSIKHRLDVVDEKSLTYKYTVLEGEILSDNIDQISKELKVTAGPDGGSILKSVSI 120
G Q S+ H++D +D+++ Y Y+++EG+ LSD I++IS E K+ A DGGS++KS S
Sbjct: 61 EGSQFGSVTHKIDGIDKENFVYSYSLVEGDALSDKIEKISYETKLVASSDGGSVIKSTSN 120
Query: 121 YHTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEY 159
YHTKGD +I E+ +K G+EK L K E YLLANP EY
Sbjct: 121 YHTKGDVEIKEEHVKAGKEKASHLFKLVEDYLLANPNEY 159
BLAST of CmoCh17G003370 vs. ExPASy Swiss-Prot
Match:
A0A024B3D0 (Major strawberry allergen Fra a 1.04 OS=Fragaria ananassa OX=3747 GN=Fra a 1.04 PE=1 SV=1)
HSP 1 Score: 184.9 bits (468), Expect = 7.2e-46
Identity = 90/159 (56.60%), Postives = 113/159 (71.07%), Query Frame = 0
Query: 1 MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPK-TEVVEGDGGPGTIKIITFS 60
MGVFTYE E T+VIPP + FKAFILDAD L PKI P K E++EGDGG GTIK ITF
Sbjct: 1 MGVFTYETEFTSVIPPPRLFKAFILDADNLIPKIAPQAVKCAEIIEGDGGVGTIKKITFG 60
Query: 61 HGEQVKSIKHRLDVVDEKSLTYKYTVLEGEILSDNIDQISKELKVTAGPDGGSILKSVSI 120
G Q S+ H++D +D+ + Y Y+++EG+ LSD I++IS E K+ A DGGS++KS S
Sbjct: 61 EGSQFGSVTHKIDGIDKDNFAYSYSLVEGDALSDKIEKISYETKLVASSDGGSVIKSTSN 120
Query: 121 YHTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEY 159
YHTKGD +I E+ +K G+EK L K E YLLANP EY
Sbjct: 121 YHTKGDVEIKEEHVKAGKEKASHLFKLVEDYLLANPNEY 159
BLAST of CmoCh17G003370 vs. ExPASy TrEMBL
Match:
A0A6J1H587 (major allergen Pru ar 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460167 PE=3 SV=1)
HSP 1 Score: 320.9 bits (821), Expect = 3.1e-84
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query: 1 MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPKTEVVEGDGGPGTIKIITFSH 60
MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPKTEVVEGDGGPGTIKIITFSH
Sbjct: 1 MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPKTEVVEGDGGPGTIKIITFSH 60
Query: 61 GEQVKSIKHRLDVVDEKSLTYKYTVLEGEILSDNIDQISKELKVTAGPDGGSILKSVSIY 120
GEQVKSIKHRLDVVDEKSLTYKYTVLEGEILSDNIDQISKELKVTAGPDGGSILKSVSIY
Sbjct: 61 GEQVKSIKHRLDVVDEKSLTYKYTVLEGEILSDNIDQISKELKVTAGPDGGSILKSVSIY 120
Query: 121 HTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEYN 160
HTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEYN
Sbjct: 121 HTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEYN 159
BLAST of CmoCh17G003370 vs. ExPASy TrEMBL
Match:
A0A6J1KZ37 (major allergen Pru ar 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498919 PE=3 SV=1)
HSP 1 Score: 317.0 bits (811), Expect = 4.5e-83
Identity = 156/159 (98.11%), Postives = 158/159 (99.37%), Query Frame = 0
Query: 1 MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPKTEVVEGDGGPGTIKIITFSH 60
MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPKTEVVEGDGGPGTIKIITFSH
Sbjct: 1 MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPKTEVVEGDGGPGTIKIITFSH 60
Query: 61 GEQVKSIKHRLDVVDEKSLTYKYTVLEGEILSDNIDQISKELKVTAGPDGGSILKSVSIY 120
G QVKSIKHRLDVVDEKSLTYKYTVLEGE+LSDNIDQISKELKVTAGPDGGSILKS+SIY
Sbjct: 61 GGQVKSIKHRLDVVDEKSLTYKYTVLEGELLSDNIDQISKELKVTAGPDGGSILKSISIY 120
Query: 121 HTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEYN 160
HTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEYN
Sbjct: 121 HTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEYN 159
BLAST of CmoCh17G003370 vs. ExPASy TrEMBL
Match:
A0A6J1CDT7 (major allergen Pru ar 1-like OS=Momordica charantia OX=3673 GN=LOC111009801 PE=3 SV=1)
HSP 1 Score: 272.7 bits (696), Expect = 9.7e-70
Identity = 130/159 (81.76%), Postives = 147/159 (92.45%), Query Frame = 0
Query: 1 MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPKTEVVEGDGGPGTIKIITFSH 60
MGVFTYENEV T +PPAKFFKAFILDADRLY KIVP+QP+TEV+EGDGGPG++K I+FSH
Sbjct: 1 MGVFTYENEVATSVPPAKFFKAFILDADRLYSKIVPNQPQTEVIEGDGGPGSVKKISFSH 60
Query: 61 GEQVKSIKHRLDVVDEKSLTYKYTVLEGEILSDNIDQISKELKVTAGPDGGSILKSVSIY 120
G QVKSIKHR+DVVDE SLT+KYTVLEGE+LSD +DQISKEL VTAG DGGS++KSVSIY
Sbjct: 61 GGQVKSIKHRIDVVDEASLTFKYTVLEGELLSDYVDQISKELTVTAGADGGSVVKSVSIY 120
Query: 121 HTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEYN 160
HTKGDHQ+DE++LK GE+KGL LLKAAE YLLANPAEYN
Sbjct: 121 HTKGDHQMDEERLKAGEQKGLALLKAAENYLLANPAEYN 159
BLAST of CmoCh17G003370 vs. ExPASy TrEMBL
Match:
A0A5D3BVU0 (Major allergen Pru ar 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00120 PE=3 SV=1)
HSP 1 Score: 267.3 bits (682), Expect = 4.1e-68
Identity = 127/159 (79.87%), Postives = 146/159 (91.82%), Query Frame = 0
Query: 1 MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPKTEVVEGDGGPGTIKIITFSH 60
MGVFT+ENEVT+VIPP KFFKAFILDAD LYPKI+P+QP+TE+VEGDGG GTIK ITF++
Sbjct: 1 MGVFTFENEVTSVIPPTKFFKAFILDADNLYPKIIPNQPQTEIVEGDGGAGTIKKITFNY 60
Query: 61 GEQVKSIKHRLDVVDEKSLTYKYTVLEGEILSDNIDQISKELKVTAGPDGGSILKSVSIY 120
G ++K+IKHRLDVVDE SLTYKYTVLEG+++S+ IDQI KE+KVT GPDGGSILKS S+Y
Sbjct: 61 GGELKTIKHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120
Query: 121 HTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEYN 160
HTKGD+Q+DE KLK GEEKGL LLKAAEAYLLANPAEYN
Sbjct: 121 HTKGDNQLDEGKLKSGEEKGLALLKAAEAYLLANPAEYN 159
BLAST of CmoCh17G003370 vs. ExPASy TrEMBL
Match:
A0A1S3C906 (major allergen Pru ar 1-like OS=Cucumis melo OX=3656 GN=LOC103497814 PE=3 SV=1)
HSP 1 Score: 267.3 bits (682), Expect = 4.1e-68
Identity = 127/159 (79.87%), Postives = 146/159 (91.82%), Query Frame = 0
Query: 1 MGVFTYENEVTTVIPPAKFFKAFILDADRLYPKIVPHQPKTEVVEGDGGPGTIKIITFSH 60
MGVFT+ENEVT+VIPP KFFKAFILDAD LYPKI+P+QP+TE+VEGDGG GTIK ITF++
Sbjct: 1 MGVFTFENEVTSVIPPTKFFKAFILDADNLYPKIIPNQPQTEIVEGDGGAGTIKKITFNY 60
Query: 61 GEQVKSIKHRLDVVDEKSLTYKYTVLEGEILSDNIDQISKELKVTAGPDGGSILKSVSIY 120
G ++K+IKHRLDVVDE SLTYKYTVLEG+++S+ IDQI KE+KVT GPDGGSILKS S+Y
Sbjct: 61 GGELKTIKHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVY 120
Query: 121 HTKGDHQIDEQKLKIGEEKGLGLLKAAEAYLLANPAEYN 160
HTKGD+Q+DE KLK GEEKGL LLKAAEAYLLANPAEYN
Sbjct: 121 HTKGDNQLDEGKLKSGEEKGLALLKAAEAYLLANPAEYN 159
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O50001 | 2.4e-49 | 58.75 | Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1 | [more] |
D0E0C6 | 3.2e-46 | 56.60 | Major strawberry allergen Fra a 1-2 OS=Fragaria ananassa OX=3747 GN=FRAA2 PE=1 S... | [more] |
A0A024B404 | 3.2e-46 | 57.23 | Major strawberry allergen Fra a 1.05 OS=Fragaria ananassa OX=3747 GN=Fra a 1.05 ... | [more] |
A0A024B3G5 | 3.2e-46 | 57.23 | Major strawberry allergen Fra a 1.06 OS=Fragaria ananassa OX=3747 GN=Fra a 1.06 ... | [more] |
A0A024B3D0 | 7.2e-46 | 56.60 | Major strawberry allergen Fra a 1.04 OS=Fragaria ananassa OX=3747 GN=Fra a 1.04 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1H587 | 3.1e-84 | 100.00 | major allergen Pru ar 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460167 PE=3 ... | [more] |
A0A6J1KZ37 | 4.5e-83 | 98.11 | major allergen Pru ar 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498919 PE=3 SV... | [more] |
A0A6J1CDT7 | 9.7e-70 | 81.76 | major allergen Pru ar 1-like OS=Momordica charantia OX=3673 GN=LOC111009801 PE=3... | [more] |
A0A5D3BVU0 | 4.1e-68 | 79.87 | Major allergen Pru ar 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
A0A1S3C906 | 4.1e-68 | 79.87 | major allergen Pru ar 1-like OS=Cucumis melo OX=3656 GN=LOC103497814 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |