CmoCh17G000140 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G000140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Vacuolar iron family transporter
Location	Cmo_Chr17: 71717 .. 73067 (-)
RNA-Seq Expression	CmoCh17G000140
Synteny	CmoCh17G000140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAAGAAATGGAAGCATCAAGCGGCGTGGGTGCGGCCAGCGAGCAGCTAATCGGGGCGGAAGACGACAGGAAGGGGAAGAAAAGGCCAAATGAACCGTGGAACGGAAAGCTGGCCAAAAGCATCGTGTACGGAGGGCTGGACGCCATTGTTACATGTTTCTCTCTCATTGCTTCTATTTCCGCTACCCGCCACTCTGCCGGTCACCCTTTTTCTTTTTCTTTTCAAATACTGCTTTCTATTTAATATTACCAATATTGAGAAATACTGCTTTCTATTTAATATTTTTCTATTTAATATTACCAATCTTGATTCTCAATAATGGTATGATATTGTATATTTTATACCAATAATAATAATAATAATAATAATAATAATAATTTACTTTAATTAATTTTCATAATTATAGTGGATGTTCTGGTGCTGGGATTTGCCAACCTAATAGCGGATGGGATATCCATGGGGTTCGGAGACTACGTGGCCACCACCACAGAGAGAGCTGTCACCGTGAAGGAGAGGGCGGCGACGGAGTGGGACATCGACAACCGCCCTGAACATCAGCAGCTCCTCCTCCTTCAACACTACCAGTCTCTCGGAATGGACTTTCACGATGCCTCTACAGTACTCTCTCTCTCTTTCTTTTCCTCTCCCACTTTTTTTTTTTTTTTTTTTAATTAAAAAAAAAAAAAAAAAAAAAGTCAAACTCGTCAGGTGGTGAACATAATGGCGAAGTACAAGCACATAATGGTAGAGGAGAAGAAAGGCGCGGCAGCTCCGCCAAAGGACAGCAAAGACCGTCCATGGAAGAACGGGCTGGCGACGTTCGGATCCTTTCTCGCGTTCGGCTGCATCCCACTTCTCTCCTTCATCCTCCTCATTCCTTTCACCGATAACGAGACCCTTAAGTTCGGTGGGGCTTGCATTCTGGCCCTTCTTGCACTTGTGCTTCTAGGTGTCGCCCGAGCAAAGATCGCCGCCGGAAACTATGGCTTCTCCGTCGCCTTAACGGTGCTTAATGGTGCGGTTGCGGCGGCAGCCGCCTACTCTCTCGGCTGGGCTCTAAGGAATGTAGCTGGAGTCGAAGAGGAGACAGAGACTTAAATTTTGGAGATAGTAGTCTGAGGGGTACGTTTAAAAAATACATTTTAATAATAACTATTACGTACGTTTTGTTTGAACATATATATATAATATTATATTATTGGGAAGCTAATTTGTGTGGCAATTAAGCTGGTAAGGAAAATTGGTTGGTGTGGAATTATTATTTTAAATTATTTAGTATTTAGGGAAAATAATATATTATAGAGTTTGAATTTTTTAATTTATGCAGCCTACCTTGACGGGAATGTGAG

mRNA sequence

GTAAAGAAATGGAAGCATCAAGCGGCGTGGGTGCGGCCAGCGAGCAGCTAATCGGGGCGGAAGACGACAGGAAGGGGAAGAAAAGGCCAAATGAACCGTGGAACGGAAAGCTGGCCAAAAGCATCGTGTACGGAGGGCTGGACGCCATTGTTACATGTTTCTCTCTCATTGCTTCTATTTCCGCTACCCGCCACTCTGCCGTGGATGTTCTGGTGCTGGGATTTGCCAACCTAATAGCGGATGGGATATCCATGGGGTTCGGAGACTACGTGGCCACCACCACAGAGAGAGCTGTCACCGTGAAGGAGAGGGCGGCGACGGAGTGGGACATCGACAACCGCCCTGAACATCAGCAGCTCCTCCTCCTTCAACACTACCAGTCTCTCGGAATGGACTTTCACGATGCCTCTACAGTGGTGAACATAATGGCGAAGTACAAGCACATAATGGTAGAGGAGAAGAAAGGCGCGGCAGCTCCGCCAAAGGACAGCAAAGACCGTCCATGGAAGAACGGGCTGGCGACGTTCGGATCCTTTCTCGCGTTCGGCTGCATCCCACTTCTCTCCTTCATCCTCCTCATTCCTTTCACCGATAACGAGACCCTTAAGTTCGGTGGGGCTTGCATTCTGGCCCTTCTTGCACTTGTGCTTCTAGGTGTCGCCCGAGCAAAGATCGCCGCCGGAAACTATGGCTTCTCCGTCGCCTTAACGGTGCTTAATGGTGCGGTTGCGGCGGCAGCCGCCTACTCTCTCGGCTGGGCTCTAAGGAATGTAGCTGGAGTCGAAGAGGAGACAGAGACTTAAATTTTGGAGATAGTAGTCTGAGGGGTACGTTTAAAAAATACATTTTAATAATAACTATTACGTACGTTTTGTTTGAACATATATATATAATATTATATTATTGGGAAGCTAATTTGTGTGGCAATTAAGCTGGTAAGGAAAATTGGTTGGTGTGGAATTATTATTTTAAATTATTTAGTATTTAGGGAAAATAATATATTATAGAGTTTGAATTTTTTAATTTATGCAGCCTACCTTGACGGGAATGTGAG

Coding sequence (CDS)

ATGGAAGCATCAAGCGGCGTGGGTGCGGCCAGCGAGCAGCTAATCGGGGCGGAAGACGACAGGAAGGGGAAGAAAAGGCCAAATGAACCGTGGAACGGAAAGCTGGCCAAAAGCATCGTGTACGGAGGGCTGGACGCCATTGTTACATGTTTCTCTCTCATTGCTTCTATTTCCGCTACCCGCCACTCTGCCGTGGATGTTCTGGTGCTGGGATTTGCCAACCTAATAGCGGATGGGATATCCATGGGGTTCGGAGACTACGTGGCCACCACCACAGAGAGAGCTGTCACCGTGAAGGAGAGGGCGGCGACGGAGTGGGACATCGACAACCGCCCTGAACATCAGCAGCTCCTCCTCCTTCAACACTACCAGTCTCTCGGAATGGACTTTCACGATGCCTCTACAGTGGTGAACATAATGGCGAAGTACAAGCACATAATGGTAGAGGAGAAGAAAGGCGCGGCAGCTCCGCCAAAGGACAGCAAAGACCGTCCATGGAAGAACGGGCTGGCGACGTTCGGATCCTTTCTCGCGTTCGGCTGCATCCCACTTCTCTCCTTCATCCTCCTCATTCCTTTCACCGATAACGAGACCCTTAAGTTCGGTGGGGCTTGCATTCTGGCCCTTCTTGCACTTGTGCTTCTAGGTGTCGCCCGAGCAAAGATCGCCGCCGGAAACTATGGCTTCTCCGTCGCCTTAACGGTGCTTAATGGTGCGGTTGCGGCGGCAGCCGCCTACTCTCTCGGCTGGGCTCTAAGGAATGTAGCTGGAGTCGAAGAGGAGACAGAGACTTAA

Protein sequence

MEASSGVGAASEQLIGAEDDRKGKKRPNEPWNGKLAKSIVYGGLDAIVTCFSLIASISATRHSAVDVLVLGFANLIADGISMGFGDYVATTTERAVTVKERAATEWDIDNRPEHQQLLLLQHYQSLGMDFHDASTVVNIMAKYKHIMVEEKKGAAAPPKDSKDRPWKNGLATFGSFLAFGCIPLLSFILLIPFTDNETLKFGGACILALLALVLLGVARAKIAAGNYGFSVALTVLNGAVAAAAAYSLGWALRNVAGVEEETET

Homology

[Close]

BLAST of CmoCh17G000140 vs. ExPASy Swiss-Prot
Match: P0DO17 (Vacuolar iron transporter 1 OS=Eucalyptus grandis OX=71139 GN=VIT1 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.2e-10
Identity = 59/226 (26.11%), Postives = 107/226 (47.35%), Query Frame = 0


Query: 33  GKLAKSIVYGGLDAIVTCFSLIASISATRHSAVDVLVLGFANLIADGISMGFGDYVATTT 92
           G++ + I+ G  D +   F+L A +S    S+  VL  G A + A  ISMG G Y+A  +
Sbjct: 31  GEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKS 90

Query: 93  ERAVTVKERAATEWDIDNRPEHQQLLLLQHYQSLGMDFHDASTVVNIMAK----YKHIMV 152
           E     +E    + +I   P+ +   + +     G++ H+   VVN + K    +   M+
Sbjct: 91  EADNYARELKREQEEIIRVPDTEAAEVAEILARYGIEPHEYGPVVNALRKKPQAWLDFMM 150

Query: 153 EEKKGAAAPPKDSKDRPWKNGLATFGSFLAFGCIPLLSFILLIPFTDNETLKFGGACILA 212
           + + G   P  D K R  ++      +++  G +PL+ + + IP      +    + IL 
Sbjct: 151 KFELGLEKP--DPK-RALQSAFTIAIAYVLGGLVPLIPY-MFIPVARKAVV---ASVILT 210

Query: 213 LLALVLLGVARAKIAAGNYGFSVALTVLNGAVAAAAAYSLGWALRN 255
           L+AL++ G A+          S   T L GA+A+AAA+ +  A+++
Sbjct: 211 LMALLIFGYAKGYFTDNKPFKSALQTALIGAIASAAAFGMAKAVQS 249

[Close]

BLAST of CmoCh17G000140 vs. ExPASy Swiss-Prot
Match: Q9ZUA5 (Vacuolar iron transporter 1 OS=Arabidopsis thaliana OX=3702 GN=VIT1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 8.1e-10
Identity = 61/220 (27.73%), Postives = 102/220 (46.36%), Query Frame = 0


Query: 33  GKLAKSIVYGGLDAIVTCFSLIASISATRHSAVDVLVLGFANLIADGISMGFGDYVATTT 92
           G++ + I+ G  D +   F+L A +S    S+  VL  G A + A  ISMG G Y+A  +
Sbjct: 32  GEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKS 91

Query: 93  ERAVTVKERAATEWDIDNRPEHQQLLLLQHYQSLGMDFHDASTVVNIMAK----YKHIMV 152
           E     +E    + +I   PE +   + +     G++ H+ S VVN + K    +   M+
Sbjct: 92  EEDHYAREMKREQEEIVAVPETEAAEVAEILAQYGIEPHEYSPVVNALRKNPQAWLDFMM 151

Query: 153 EEKKGAAAPPKDSKDRPWKNGLATFGSFLAFGCIPLLSFILLIPFTDNETLKFGGACILA 212
             + G   P  D K R  ++      +++  G IPLL + +LIP   +  +    + ++ 
Sbjct: 152 RFELGLEKP--DPK-RALQSAFTIAIAYVLGGFIPLLPY-MLIPHAMDAVV---ASVVIT 211

Query: 213 LLALVLLGVARAKIAAGNYGFSVALTVLNGAVAAAAAYSL 249
           L AL + G A+          S   T   GA+A+AAA+ L
Sbjct: 212 LFALFIFGYAKGHFTGSKPLRSAFETAFIGAIASAAAFCL 244

[Close]

BLAST of CmoCh17G000140 vs. ExPASy Swiss-Prot
Match: Q6MWE5 (Vacuolar iron transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=VIT1 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.4e-08
Identity = 57/226 (25.22%), Postives = 104/226 (46.02%), Query Frame = 0


Query: 32  NGKLAKSIVYGGLDAIVTCFSLIASISATRHSAVDVLVLGFANLIADGISMGFGDYVATT 91
           +G++ + ++ G  D +   F+L A +S     +  VL  G A + A  ISMG G Y+A  
Sbjct: 32  SGEVVRDVIMGVSDGLTVPFALAAGLSGASAPSSLVLTAGLAEVAAGAISMGLGGYLAAK 91

Query: 92  TERAVTVKERAATEWDIDNRPEHQQLLLLQHYQSLGMDFHDASTVVNIMAK----YKHIM 151
           +E     +E    + +I   P+ +   + +     G++ H+   VV+ + +    +   M
Sbjct: 92  SEADHYQREMKREQEEIIAVPDTEAAEIGEIMSQYGLEPHEYGPVVDGLRRNPQAWLDFM 151

Query: 152 VEEKKGAAAPPKDSKDRPWKNGLATFGSFLAFGCIPLLSFILLIPFTDNETLKFGGACIL 211
           +  + G   P  D K R  ++ L    S++  G +PLL + + I    N  L   G   +
Sbjct: 152 MRFELGLEKP--DPK-RAIQSALTIALSYVIGGLVPLLPY-MFISTAQNAMLTSVG---V 211

Query: 212 ALLALVLLGVARAKIAAGNYGFSVALTVLNGAVAAAAAYSLGWALR 254
            L+AL+  G  + +        S   T + GA+A+AAAY +  A++
Sbjct: 212 TLVALLFFGYIKGRFTGNRPFLSAVQTAIIGALASAAAYGMAKAVQ 250

[Close]

BLAST of CmoCh17G000140 vs. ExPASy Swiss-Prot
Match: Q6ERE5 (Vacuolar iron transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=VIT2 PE=2 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 3.7e-07
Identity = 51/224 (22.77%), Postives = 96/224 (42.86%), Query Frame = 0


Query: 33  GKLAKSIVYGGLDAIVTCFSLIASISATRHSAVDVLVLGFANLIADGISMGFGDYVATTT 92
           G++ + I+ G  D +   F+L A +S     +  VL  G A + A  ISMG G Y+A  +
Sbjct: 27  GEVVRDIIIGVSDGLTVPFALAAGLSGANAPSALVLTAGLAEVAAGAISMGLGGYLAAKS 86

Query: 93  ERAVTVKERAATEWDIDNRPEHQQLLLLQHYQSLGMDFHDASTVVNIMAKYKHIMVE-EK 152
           +     +E    + +ID  P+ +   +       G+   +   VVN +       +E   
Sbjct: 87  DADHYHRELQREQEEIDTVPDTEAAEIADILSQYGLGPEEYGPVVNSLRSNPKAWLEFMM 146

Query: 153 KGAAAPPKDSKDRPWKNGLATFGSFLAFGCIPLLSFILLIPFTDNETLKFGGACILALLA 212
           K      K    R   +      +++  G +PLL + + +P  D        + ++ L A
Sbjct: 147 KFELGLEKPEPRRALMSAGTIALAYVVGGLVPLLPY-MFVPTADR---AMATSVVVTLAA 206

Query: 213 LVLLGVARAKIAAGNYGFSVALTVLNGAVAAAAAYSLGWALRNV 256
           L+  G  + +        S   T + GA+A+AAA+ +  A++++
Sbjct: 207 LLFFGYVKGRFTGNRPFISAFQTAVIGALASAAAFGMAKAVQSI 246

[Close]

BLAST of CmoCh17G000140 vs. ExPASy Swiss-Prot
Match: Q9LSF6 (Vacuolar iron transporter homolog 2.1 OS=Arabidopsis thaliana OX=3702 GN=VTL5 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.6e-04
Identity = 51/215 (23.72%), Postives = 91/215 (42.33%), Query Frame = 0


Query: 37  KSIVYGGLDAIVTCFSLIASISATRHSAVDVLVLGFANLIADGISMGFGDYVATTTERAV 96
           ++ + G  D +VT  SL+  + + +     +L++GFA L+A   SM  G++V+  T+R  
Sbjct: 37  RAALLGANDGLVTVASLMMGVGSIKEDVKAMLLVGFAGLVAGACSMAIGEFVSVCTQR-- 96

Query: 97  TVKERAATEWDIDNRPEHQQLLLLQHYQSLGMDFHDASTVVNIMAKYKHIMVEEKKGAAA 156
                     DI+     Q    ++H  SL                     ++E++    
Sbjct: 97  ----------DIETA---QMKRAIEHKTSLS-------------------AIDEQE---- 156

Query: 157 PPKDSKDRPWKNGLATFGSFLAF---GCIPLLSFILLIPFTDNETLKFGGACILALLALV 216
             ++ K+R    G A   S LAF     +PLL  +    F +N  ++     ++A +ALV
Sbjct: 157 -EEEKKERLPNPGQAAIASALAFSVGAAMPLLGAV----FIENHKVRMVVVAVVATIALV 208

Query: 217 LLGVARAKIAAGNYGFSVALTVLNGAVAAAAAYSL 249
           + GV  A +   +   S    V+ G +A A  + L
Sbjct: 217 VFGVTGAVLGKTSVVKSSVRVVIGGWMAMALTFGL 208

[Close]

BLAST of CmoCh17G000140 vs. ExPASy TrEMBL
Match: A0A6J1H491 (uncharacterized protein LOC111460342 OS=Cucurbita moschata OX=3662 GN=LOC111460342 PE=3 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.0e-141
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MEASSGVGAASEQLIGAEDDRKGKKRPNEPWNGKLAKSIVYGGLDAIVTCFSLIASISAT 60
           MEASSGVGAASEQLIGAEDDRKGKKRPNEPWNGKLAKSIVYGGLDAIVTCFSLIASISAT
Sbjct: 1   MEASSGVGAASEQLIGAEDDRKGKKRPNEPWNGKLAKSIVYGGLDAIVTCFSLIASISAT 60

Query: 61  RHSAVDVLVLGFANLIADGISMGFGDYVATTTERAVTVKERAATEWDIDNRPEHQQLLLL 120
           RHSAVDVLVLGFANLIADGISMGFGDYVATTTERAVTVKERAATEWDIDNRPEHQQLLLL
Sbjct: 61  RHSAVDVLVLGFANLIADGISMGFGDYVATTTERAVTVKERAATEWDIDNRPEHQQLLLL 120

Query: 121 QHYQSLGMDFHDASTVVNIMAKYKHIMVEEKKGAAAPPKDSKDRPWKNGLATFGSFLAFG 180
           QHYQSLGMDFHDASTVVNIMAKYKHIMVEEKKGAAAPPKDSKDRPWKNGLATFGSFLAFG
Sbjct: 121 QHYQSLGMDFHDASTVVNIMAKYKHIMVEEKKGAAAPPKDSKDRPWKNGLATFGSFLAFG 180

Query: 181 CIPLLSFILLIPFTDNETLKFGGACILALLALVLLGVARAKIAAGNYGFSVALTVLNGAV 240
           CIPLLSFILLIPFTDNETLKFGGACILALLALVLLGVARAKIAAGNYGFSVALTVLNGAV
Sbjct: 181 CIPLLSFILLIPFTDNETLKFGGACILALLALVLLGVARAKIAAGNYGFSVALTVLNGAV 240

Query: 241 AAAAAYSLGWALRNVAGVEEETET 265
           AAAAAYSLGWALRNVAGVEEETET
Sbjct: 241 AAAAAYSLGWALRNVAGVEEETET 264

[Close]

BLAST of CmoCh17G000140 vs. ExPASy TrEMBL
Match: A0A6J1KYG2 (uncharacterized protein LOC111499350 OS=Cucurbita maxima OX=3661 GN=LOC111499350 PE=3 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.1e-137
Identity = 257/264 (97.35%), Postives = 260/264 (98.48%), Query Frame = 0


Query: 1   MEASSGVGAASEQLIGAEDDRKGKKRPNEPWNGKLAKSIVYGGLDAIVTCFSLIASISAT 60
           MEAS+GVGAASEQLIGAEDDRKGKKRPNEPWNGKL KSIVYGGLDAIVTCFSLIASISAT
Sbjct: 1   MEASTGVGAASEQLIGAEDDRKGKKRPNEPWNGKLGKSIVYGGLDAIVTCFSLIASISAT 60

Query: 61  RHSAVDVLVLGFANLIADGISMGFGDYVATTTERAVTVKERAATEWDIDNRPEHQQLLLL 120
           RHSAVDVLVLGFANLIADGISMGFGDYVATTTERAV+VKERAA EWDIDNRPEHQ LLLL
Sbjct: 61  RHSAVDVLVLGFANLIADGISMGFGDYVATTTERAVSVKERAAAEWDIDNRPEHQHLLLL 120

Query: 121 QHYQSLGMDFHDASTVVNIMAKYKHIMVEEKKGAAAPPKDSKDRPWKNGLATFGSFLAFG 180
           QHYQSLGMDFHDASTVVNIMAKYKHIMVEEKKGAAAPPKDSKDRPWKNGLATFGSFLAFG
Sbjct: 121 QHYQSLGMDFHDASTVVNIMAKYKHIMVEEKKGAAAPPKDSKDRPWKNGLATFGSFLAFG 180

Query: 181 CIPLLSFILLIPFTDNETLKFGGACILALLALVLLGVARAKIAAGNYGFSVALTVLNGAV 240
           CIPLLSFILLIPFTDNETLKFGGACILALLALVLLGVARAKIAAGNYGFSVALTVLNGAV
Sbjct: 181 CIPLLSFILLIPFTDNETLKFGGACILALLALVLLGVARAKIAAGNYGFSVALTVLNGAV 240

Query: 241 AAAAAYSLGWALRNVAGVEEETET 265
           AAAAAYSLGW LRNVAGV+EETET
Sbjct: 241 AAAAAYSLGWGLRNVAGVDEETET 264

[Close]

BLAST of CmoCh17G000140 vs. ExPASy TrEMBL
Match: A0A6J1DPD7 (uncharacterized protein LOC111023075 OS=Momordica charantia OX=3673 GN=LOC111023075 PE=3 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.7e-108
Identity = 206/264 (78.03%), Postives = 233/264 (88.26%), Query Frame = 0


Query: 3   ASSGVGAASEQLIGAEDDRKGKKRPNEPWNGKLAKSIVYGGLDAIVTCFSLIASISATRH 62
           ASS   AA+E LI  E+  KG +RP EPWNG+LAKSIVYGGLDAIVTCFSLIASISA+RH
Sbjct: 2   ASSAAAAAAEVLISPEN--KGNERPKEPWNGELAKSIVYGGLDAIVTCFSLIASISASRH 61

Query: 63  SAVDVLVLGFANLIADGISMGFGDYVATTTERAVTVKERAATEWDIDNRPEHQQLLLLQH 122
           SAVDVLVLGFANLIADGISMGFGD+V+T T R V  + RAA EWD+DNR   QQ LLL+H
Sbjct: 62  SAVDVLVLGFANLIADGISMGFGDFVSTATGRDVAAERRAAAEWDVDNRRAQQQQLLLRH 121

Query: 123 YQSLGMDFHDASTVVNIMAKYKHIMVEEK----KGAAAPPKDSKDRPWKNGLATFGSFLA 182
           YQ+LGMDF+DASTVVNI+AKYKHI+VEEK     G AAPP++SK+RPWKNG+ TFGSFLA
Sbjct: 122 YQTLGMDFNDASTVVNIIAKYKHILVEEKMAAENGMAAPPEESKERPWKNGIVTFGSFLA 181

Query: 183 FGCIPLLSFILLIPFTDNETLKFGGACILALLALVLLGVARAKIAAGNYGFSVALTVLNG 242
           FGC+PLLSFI+LIPFTDNE++KFGGAC+LA LALVLLG+ARAKIAAGNYGFSVA+TVLNG
Sbjct: 182 FGCVPLLSFIVLIPFTDNESIKFGGACLLAALALVLLGIARAKIAAGNYGFSVAVTVLNG 241

Query: 243 AVAAAAAYSLGWALRNVAGVEEET 263
           AVAA AAY+LGW LRNVAGVE+ET
Sbjct: 242 AVAAGAAYALGWVLRNVAGVEDET 263

[Close]

BLAST of CmoCh17G000140 vs. ExPASy TrEMBL
Match: A0A4U5QUA2 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000046620 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 5.0e-79
Identity = 160/265 (60.38%), Postives = 201/265 (75.85%), Query Frame = 0


Query: 1   MEASSGVGAASEQLIGAED--DRKG---KKRPNEPWNGKLAKSIVYGGLDAIVTCFSLIA 60
           M   +G   A+ +L+ AED  +R G   + RP EPW G+  KS+VY GLDAI+TCFSLI+
Sbjct: 1   MAGDAGGTNATARLLRAEDGGNRSGQVEEGRPKEPWKGEYVKSVVYAGLDAIITCFSLIS 60

Query: 61  SISATRHSAVDVLVLGFANLIADGISMGFGDYVATTTERAVTVKERAATEWDIDNRPEHQ 120
           SISAT  S+VDVLVLGFANL+ADGISMG GDYV+++TE+ V  KERA TEWD+ N    Q
Sbjct: 61  SISATHSSSVDVLVLGFANLVADGISMGLGDYVSSSTEKDVAAKERAVTEWDVTNHGRAQ 120

Query: 121 QLLLLQHYQSLGMDFHDASTVVNIMAKYKHIMVEEKKGA--AAPPKDSKDRPWKNGLATF 180
           +  L++ YQ LGMD HDA+TVV I AKYK I+V+EK  A     P D +++PWKNGL T 
Sbjct: 121 RQELVRKYQQLGMDIHDAATVVEIFAKYKDILVDEKMTAEKGMTPPDEEEKPWKNGLITL 180

Query: 181 GSFLAFGCIPLLSFILLIPFTDNETLKFGGACILALLALVLLGVARAKIAAGNYGFSVAL 240
            +FL FGC+PLLSF++LIPFT+NET+KF GAC +A+LAL +LG+A+AKIA  NY  SV +
Sbjct: 181 VAFLVFGCLPLLSFVVLIPFTNNETVKFFGACFMAILALAVLGIAKAKIAGQNYVLSVFI 240

Query: 241 TVLNGAVAAAAAYSLGWALRNVAGV 259
           TV NGA AAAAAY++GW LRNVAG+
Sbjct: 241 TVGNGAFAAAAAYAIGWTLRNVAGL 265

[Close]

BLAST of CmoCh17G000140 vs. ExPASy TrEMBL
Match: A0A7N2MDQ6 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 8.5e-79
Identity = 159/270 (58.89%), Postives = 204/270 (75.56%), Query Frame = 0


Query: 1   MEASSGVGAASEQLIGAEDDRKGKK--------RPNEPWNGKLAKSIVYGGLDAIVTCFS 60
           M  ++G   ++ +L+ AED R   +        RP EPW G   KSIVY GLDAIVTCFS
Sbjct: 1   MAENTGGATSTSRLLRAEDGRGDSESERGGASGRPREPWKGDFVKSIVYAGLDAIVTCFS 60

Query: 61  LIASISATRHSAVDVLVLGFANLIADGISMGFGDYVATTTERAVTVKERAATEWDIDNRP 120
           LI+SISA+R+S+VDVLVLGF+NL+ADGISMGFGD+V+++TE+ V  KERA T WD+ N  
Sbjct: 61  LISSISASRYSSVDVLVLGFSNLVADGISMGFGDFVSSSTEKDVAAKERAVTAWDVTNHS 120

Query: 121 EHQQLLLLQHYQSLGMDFHDASTVVNIMAKYKHIMVEEKKGA--AAPPKDSKDRPWKNGL 180
            ++Q  LL+ YQ+LGMD +DA+TVVNI AKYK I V+EK  A     P D  D+PWKNGL
Sbjct: 121 GNEQEELLRQYQALGMDINDATTVVNIFAKYKDIFVDEKMMAHKGILPPDEADKPWKNGL 180

Query: 181 ATFGSFLAFGCIPLLSFILLIPFTDNETLKFGGACILALLALVLLGVARAKIAAGNYGFS 240
            TF +FL FG  PLLSFI+LIPFT+N+++KF GACIL+ LAL LLG+A+AKIA  NY FS
Sbjct: 181 VTFAAFLVFGSAPLLSFIILIPFTNNDSIKFVGACILSALALALLGMAKAKIAGQNYAFS 240

Query: 241 VALTVLNGAVAAAAAYSLGWALRNVAGVEE 261
           +A+T+  GA+AAAAAY+LG  L+NVAG+++
Sbjct: 241 MAITLFTGAIAAAAAYTLGSVLKNVAGIQD 270

[Close]

BLAST of CmoCh17G000140 vs. TAIR 10
Match: AT2G01770.1 (vacuolar iron transporter 1 )

HSP 1 Score: 65.9 bits (159), Expect = 5.7e-11
Identity = 61/220 (27.73%), Postives = 102/220 (46.36%), Query Frame = 0


Query: 33  GKLAKSIVYGGLDAIVTCFSLIASISATRHSAVDVLVLGFANLIADGISMGFGDYVATTT 92
           G++ + I+ G  D +   F+L A +S    S+  VL  G A + A  ISMG G Y+A  +
Sbjct: 32  GEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKS 91

Query: 93  ERAVTVKERAATEWDIDNRPEHQQLLLLQHYQSLGMDFHDASTVVNIMAK----YKHIMV 152
           E     +E    + +I   PE +   + +     G++ H+ S VVN + K    +   M+
Sbjct: 92  EEDHYAREMKREQEEIVAVPETEAAEVAEILAQYGIEPHEYSPVVNALRKNPQAWLDFMM 151

Query: 153 EEKKGAAAPPKDSKDRPWKNGLATFGSFLAFGCIPLLSFILLIPFTDNETLKFGGACILA 212
             + G   P  D K R  ++      +++  G IPLL + +LIP   +  +    + ++ 
Sbjct: 152 RFELGLEKP--DPK-RALQSAFTIAIAYVLGGFIPLLPY-MLIPHAMDAVV---ASVVIT 211

Query: 213 LLALVLLGVARAKIAAGNYGFSVALTVLNGAVAAAAAYSL 249
           L AL + G A+          S   T   GA+A+AAA+ L
Sbjct: 212 LFALFIFGYAKGHFTGSKPLRSAFETAFIGAIASAAAFCL 244

[Close]

BLAST of CmoCh17G000140 vs. TAIR 10
Match: AT3G25190.1 (Vacuolar iron transporter (VIT) family protein )

HSP 1 Score: 45.8 bits (107), Expect = 6.1e-05
Identity = 51/215 (23.72%), Postives = 91/215 (42.33%), Query Frame = 0


Query: 37  KSIVYGGLDAIVTCFSLIASISATRHSAVDVLVLGFANLIADGISMGFGDYVATTTERAV 96
           ++ + G  D +VT  SL+  + + +     +L++GFA L+A   SM  G++V+  T+R  
Sbjct: 37  RAALLGANDGLVTVASLMMGVGSIKEDVKAMLLVGFAGLVAGACSMAIGEFVSVCTQR-- 96

Query: 97  TVKERAATEWDIDNRPEHQQLLLLQHYQSLGMDFHDASTVVNIMAKYKHIMVEEKKGAAA 156
                     DI+     Q    ++H  SL                     ++E++    
Sbjct: 97  ----------DIETA---QMKRAIEHKTSLS-------------------AIDEQE---- 156

Query: 157 PPKDSKDRPWKNGLATFGSFLAF---GCIPLLSFILLIPFTDNETLKFGGACILALLALV 216
             ++ K+R    G A   S LAF     +PLL  +    F +N  ++     ++A +ALV
Sbjct: 157 -EEEKKERLPNPGQAAIASALAFSVGAAMPLLGAV----FIENHKVRMVVVAVVATIALV 208

Query: 217 LLGVARAKIAAGNYGFSVALTVLNGAVAAAAAYSL 249
           + GV  A +   +   S    V+ G +A A  + L
Sbjct: 217 VFGVTGAVLGKTSVVKSSVRVVIGGWMAMALTFGL 208

The following BLAST results are available for this feature:

BLAST of CmoCh17G000140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DO17	6.2e-10	26.11	Vacuolar iron transporter 1 OS=Eucalyptus grandis OX=71139 GN=VIT1 PE=1 SV=1	[more]
Q9ZUA5	8.1e-10	27.73	Vacuolar iron transporter 1 OS=Arabidopsis thaliana OX=3702 GN=VIT1 PE=1 SV=1	[more]
Q6MWE5	4.4e-08	25.22	Vacuolar iron transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=VIT1 PE=...	[more]
Q6ERE5	3.7e-07	22.77	Vacuolar iron transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=VIT2 PE=...	[more]
Q9LSF6	8.6e-04	23.72	Vacuolar iron transporter homolog 2.1 OS=Arabidopsis thaliana OX=3702 GN=VTL5 PE...	[more]

BLAST of CmoCh17G000140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H491	6.0e-141	100.00	uncharacterized protein LOC111460342 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A6J1KYG2	1.1e-137	97.35	uncharacterized protein LOC111499350 OS=Cucurbita maxima OX=3661 GN=LOC111499350...	[more]
A0A6J1DPD7	6.7e-108	78.03	uncharacterized protein LOC111023075 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A4U5QUA2	5.0e-79	60.38	Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000046620 PE=3 SV=1	[more]
A0A7N2MDQ6	8.5e-79	58.89	Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]

BLAST of CmoCh17G000140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01770.1	5.7e-11	27.73	vacuolar iron transporter 1	[more]
AT3G25190.1	6.1e-05	23.72	Vacuolar iron transporter (VIT) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008217	Ccc1 family	PFAM	PF01988	VIT1	coord: 37..249 e-value: 1.1E-43 score: 149.6
IPR008217	Ccc1 family	PANTHER	PTHR31851	FE(2+)/MN(2+) TRANSPORTER PCL1	coord: 18..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..29
None	No IPR available	PANTHER	PTHR31851:SF4	CCC1 FAMILY PROTEIN-RELATED	coord: 18..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G000140.1	CmoCh17G000140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030026	cellular manganese ion homeostasis
biological_process	GO:0006880	intracellular sequestering of iron ion
biological_process	GO:0071421	manganese ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005381	iron ion transmembrane transporter activity
molecular_function	GO:0005384	manganese ion transmembrane transporter activity