Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAATATTCAAATCGAAATCTGAATAAAATAAACTTCTGAATTTGCTTCGAATTATCTATTGATCGTTGAAGAGAAATCGGTGTTCGTCAAAAGCGGCAGTCGTCGTCGGTGGCGATGGCTCGGGCAGGTGGTCGGAGCAGGAGTGGGAACGAACCGTCGGGGGGAGGGTTTCTTAAGGCGGTTTTCAGATTATTGAAGATGGTGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTGGCTTTTATCGTTTTTAAAGATCTCGTAAGTCTCTCTGTTATTGGTCTGTTGTTATTCCTGCTCTGTCTTGAGGCATATTATCTTAATTGGATTGGATCCGCTCTGTCGTTGTTTTGTAATCTTGTTTTCAGAAATTTGGTGTATGTTAGTGTACTTTGATCCTCGAATTAGATTTGATCGAGCAGCTGATGATCTTTTCTTTTCTTTCCTCGCCGTTGTATATAGTCACTGGTTTAGAGTAAACTTATGATACGATTAAAAATTTTCGCTAATTTTTGAATGTAAAATACAGATTTGTGGAAACTTCTGTCTTTTTAGTGTACAAAATTTGGCTAGGTAGAAGGTAGAAATTATCTTTGAAAGTAGATAAAACAAGGAAGAAATTTATGCAAGTATGATTGGTAGGCAAAGGAAAAAGTTATCGTTTAGGCTCATAGATATTCCAACAAAAATTCCATTTAACAAGCCGTTTAACAAGGAGTTAAAGAAGTTAAAACAATTCCTGGATATGATTGTCCTCAACAGGCAATGGTTGATTTGACTACTGCCGTTGGCTTGTGAGCTTTGCTACTCGGACGGATGAATGTTTAGGATTGCAAGCTAAGCTTTTGAAATGGCAGAACTTGCAGTTGTTGCAAGCTCACTTTAGCCACGCTGATGGTTATAAATATTCCTGCCTATTTTCTTCTCATTGTGACTAAGAACTTGGAGAAATCTATTACAAATTTTGCACAGAAAGCTATCACTTGTGATTGTGATAGCCATCACTGCATGAGATGGAATGAGACAAATCAGTAACTCTATATATATTGTTTTCTCAAATTTTCTTTGCTGACACAAGGAAAATCACTCCAACATCAGTATTCATTTGCTTGTCAGTTTTCAAAGATTTAAACATTAGGTCATATGGTTGCTTTTGCAAGTGAATACTCATCTTTTCCTTTCTGACAAATAAATAAATAACTTTTGTACTTCATACTATGACCTTTGATTTGGAATTTGGAGTATGTATGGCGTTGTTTCATAGGAGATTTGCCCAGTTATTGCTTCCTACTCCGATTTTGATGTTGATTTTTTGGTAGTTGTGGTAGTTATGGATATGGATGCCCAATTAAGGGTATGTTCTAGTACCCTGTAGAAAAAGATGACTGGAGAGAGAGACATTTTAGAGAGAAGCGATTTATGTAACCTTGCTTGCTATCTGGTGAAAAATCTAAGCCTAAAATATGCCAAGTATTCACAATATGGAAGGAGAAGATTTGCACTAGAGGAAATAAAATACGTTTAATGAATAAGAGTGCAAGCCCTGCATTTGATCTTTTCCAACGGTAACTGAATAAAGGGAAATGGTCCAGATTTCTTTTTATAACATGGAACCCTATTTTCTAAGAAAATTCATGGGTCCAGAATGAAAGATTGCATAATTTTGAAAATATATAGGAACTTTTCTCTCTTCTTCACTGCAAGACCAGAGGATATTGCTGATGGAACATTCATGCCATTCAACAGTATTATTTCTCTCTTTCTTTCTTTCCCTTTTTTTAGAATCACTATTTCATAAGATTACTGTTGTGGGTAGCATCATTTGTTTCTTTTCGAGCTCGATTAGAAAGCGAAATGTCCTTGGAAGGAAAATTATTTATGTGATCGTACTTAAATCAGTTATCAGGATTCGGAAATTGCTTCTCACCTTAGTTCTATTCAGCTGGTATAAGTTTAGTTGTTTGTTTTCAGTTGAGAGGTGTAGTCAGTTCGAGATTGCCAGAGATACATGATATCTTGGATTTTCTTGGATAAAAATTTTAGAGAATTCTTATGTTGCTCGTTGCGTAGGCATCAACATTAAAGATTCATTTCATCGTGTATGGGTCTTGTGAGCTCATTCTCCATTTTCAATAACAATTCTCAGATAGATTCAGTGTTCTTTATTCATTTTTGTGCTGAATTTAGTTGTGAACCGTGGCATTATTTATTTATGTTTTCTCTGAAGCAGAGTAGAGTCAAAGTAGGGTCATAAATGAACGCCTATTTCAAAGCACTTTTGTAATCATTTTCTTGGTCTTATTGTTTTTTTATTGGTGCTCGTTTTAATTGTTAAGGTGTTAGAGTTTGTTTTGTGCTTTGCCTTTTTGTATGCCACTTTTGTTATCTCTTCTGAATGAAAGCATGTAAATTTATCAATTTACATCTTAAACTTTCATAAATAGGTCAATTTAGTATCTTCATTACATTTTTTTAAACAGTTAATACACAACTTTCACATTTTTTTTAAAAGATTTTAAAATGTGAGAATTAATGTAAATTAGATTGAAGCGTGCGACTCGAACGGATTGTAGCAGTTTTTTTATTTATTTGTTTTAAATTTGCGTGGTTTTCATTGTCTTCTATTTTTCTATACTTATTTAGTCTGTGGAATCTTTGGAGAATAATTTTGTTTAGGCGATTTTGAGTTTGTTTTAAATGAAATCAAGTGAAAAATAGCTATAAATCGTTAACTAACGGTATAAATTGATTCATTTATGAAAGATTAAGGTTTGAATTTATACAATTACTAGTTTAGTTTGTAGCTTTAATACTCAACTCTCAATGCATAAATTGATTTTTGTCCAAATCTTTATGTTGAAACTACTCAACAAAAATCTAGCATAACAGATCGTGAACATTCTTATTTTTCTGATTGTCTTCCTTTATTGATGTGCAAATGTTAAGAGATTCTAATCGTGTGGAATTCAATTGCAGACATCAAGGCCAGAGTACAATCAGATCCTTGTAAAGAAGCCTGAGGGTTTTGATATGTGGCCATTCCAGTAAATTCTTGACCTTGCATTCATGTAATCTGAAATATTCACTCCACTTTCTAACTTTGTGTCTTTTTATGATGATGTAAAAATGTTCGTCGATGTAGACGTTACATCTATACTGTCGTACGTTCGAAAGATTGTAAAGTAAATATTGGTTTTAGAAATGATTTGGAATTGTCAAAATAGAAAATATATCAAGGAAAAGCCGAATGTTGAAGGA
mRNA sequence
AGAATATTCAAATCGAAATCTGAATAAAATAAACTTCTGAATTTGCTTCGAATTATCTATTGATCGTTGAAGAGAAATCGGTGTTCGTCAAAAGCGGCAGTCGTCGTCGGTGGCGATGGCTCGGGCAGGTGGTCGGAGCAGGAGTGGGAACGAACCGTCGGGGGGAGGGTTTCTTAAGGCGGTTTTCAGATTATTGAAGATGGTGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTGGCTTTTATCGTTTTTAAAGATCTCACATCAAGGCCAGAGTACAATCAGATCCTTGTAAAGAAGCCTGAGGGTTTTGATATGTGGCCATTCCAGTAAATTCTTGACCTTGCATTCATGTAATCTGAAATATTCACTCCACTTTCTAACTTTGTGTCTTTTTATGATGATGTAAAAATGTTCGTCGATGTAGACGTTACATCTATACTGTCGTACGTTCGAAAGATTGTAAAGTAAATATTGGTTTTAGAAATGATTTGGAATTGTCAAAATAGAAAATATATCAAGGAAAAGCCGAATGTTGAAGGA
Coding sequence (CDS)
ATGGCTCGGGCAGGTGGTCGGAGCAGGAGTGGGAACGAACCGTCGGGGGGAGGGTTTCTTAAGGCGGTTTTCAGATTATTGAAGATGGTGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTGGCTTTTATCGTTTTTAAAGATCTCACATCAAGGCCAGAGTACAATCAGATCCTTGTAAAGAAGCCTGAGGGTTTTGATATGTGGCCATTCCAGTAA
Protein sequence
MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Homology
BLAST of CmoCh15G008040 vs. ExPASy TrEMBL
Match:
A0A6J1FE48 (uncharacterized protein LOC111444698 OS=Cucurbita moschata OX=3662 GN=LOC111444698 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 1.4e-31
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
Query: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 74
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CmoCh15G008040 vs. ExPASy TrEMBL
Match:
A0A6J1K0Z3 (uncharacterized protein LOC111489659 OS=Cucurbita maxima OX=3661 GN=LOC111489659 PE=4 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 2.2e-29
Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
Query: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MA AGGRSRSGNEPSGGGFLK VFR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MALAGGRSRSGNEPSGGGFLKTVFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 74
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CmoCh15G008040 vs. ExPASy TrEMBL
Match:
A0A1S3CK24 (uncharacterized protein LOC103501353 OS=Cucumis melo OX=3656 GN=LOC103501353 PE=4 SV=1)
HSP 1 Score: 130.6 bits (327), Expect = 2.7e-27
Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 0
Query: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARA GRSR+G++ SGGGFLKA FR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MARASGRSRNGSDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 74
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CmoCh15G008040 vs. ExPASy TrEMBL
Match:
A0A0A0KPT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315390 PE=4 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 3.0e-26
Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 0
Query: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARA GR R+G + SGGGFLKA FR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 74
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CmoCh15G008040 vs. ExPASy TrEMBL
Match:
A0A6J1CIZ9 (uncharacterized protein LOC111011789 OS=Momordica charantia OX=3673 GN=LOC111011789 PE=4 SV=1)
HSP 1 Score: 122.5 bits (306), Expect = 7.4e-25
Identity = 60/73 (82.19%), Postives = 66/73 (90.41%), Query Frame = 0
Query: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MAR GGRSR+GN+ + GFLKAV R LKM EFEILF+LFF+VAFI+FKDLTSRPEYNQIL
Sbjct: 1 MARTGGRSRNGNDSAVVGFLKAVLRFLKMAEFEILFILFFVVAFILFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 74
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CmoCh15G008040 vs. NCBI nr
Match:
XP_022938472.1 (uncharacterized protein LOC111444698 [Cucurbita moschata] >KAG7016589.1 hypothetical protein SDJN02_21699 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 144.8 bits (364), Expect = 2.9e-31
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
Query: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 74
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CmoCh15G008040 vs. NCBI nr
Match:
KAG6579058.1 (hypothetical protein SDJN03_23506, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 143.3 bits (360), Expect = 8.4e-31
Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0
Query: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARAGGRSRSGNEPSGGGFLKAVFRLLKM EFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 29 MARAGGRSRSGNEPSGGGFLKAVFRLLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 88
Query: 61 VKKPEGFDMWPFQ 74
VKKPEGFDMWPFQ
Sbjct: 89 VKKPEGFDMWPFQ 101
BLAST of CmoCh15G008040 vs. NCBI nr
Match:
XP_022993749.1 (uncharacterized protein LOC111489659 [Cucurbita maxima])
HSP 1 Score: 137.5 bits (345), Expect = 4.6e-29
Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
Query: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MA AGGRSRSGNEPSGGGFLK VFR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MALAGGRSRSGNEPSGGGFLKTVFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 74
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CmoCh15G008040 vs. NCBI nr
Match:
XP_023549700.1 (uncharacterized protein LOC111808120 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 134.4 bits (337), Expect = 3.9e-28
Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
Query: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARAGGRSRS NE SGGGFLKAVFR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MARAGGRSRSVNELSGGGFLKAVFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 74
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CmoCh15G008040 vs. NCBI nr
Match:
XP_008463128.1 (PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo])
HSP 1 Score: 130.6 bits (327), Expect = 5.6e-27
Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 0
Query: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARA GRSR+G++ SGGGFLKA FR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MARASGRSRNGSDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 74
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CmoCh15G008040 vs. TAIR 10
Match:
AT3G14430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 16 Blast hits to 16 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 77.0 bits (188), Expect = 6.9e-15
Identity = 33/54 (61.11%), Postives = 45/54 (83.33%), Query Frame = 0
Query: 19 FLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPF 73
F+ +VF ++ EFEILFVLF ++ +++FKDLTSRPEYN+ILV+KP G D+WPF
Sbjct: 23 FVDSVFYFFRLAEFEILFVLFMLITYVIFKDLTSRPEYNRILVEKPGGSDIWPF 76
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FE48 | 1.4e-31 | 100.00 | uncharacterized protein LOC111444698 OS=Cucurbita moschata OX=3662 GN=LOC1114446... | [more] |
A0A6J1K0Z3 | 2.2e-29 | 94.52 | uncharacterized protein LOC111489659 OS=Cucurbita maxima OX=3661 GN=LOC111489659... | [more] |
A0A1S3CK24 | 2.7e-27 | 89.04 | uncharacterized protein LOC103501353 OS=Cucumis melo OX=3656 GN=LOC103501353 PE=... | [more] |
A0A0A0KPT8 | 3.0e-26 | 87.67 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315390 PE=4 SV=1 | [more] |
A0A6J1CIZ9 | 7.4e-25 | 82.19 | uncharacterized protein LOC111011789 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
Match Name | E-value | Identity | Description | |
XP_022938472.1 | 2.9e-31 | 100.00 | uncharacterized protein LOC111444698 [Cucurbita moschata] >KAG7016589.1 hypothet... | [more] |
KAG6579058.1 | 8.4e-31 | 98.63 | hypothetical protein SDJN03_23506, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022993749.1 | 4.6e-29 | 94.52 | uncharacterized protein LOC111489659 [Cucurbita maxima] | [more] |
XP_023549700.1 | 3.9e-28 | 94.52 | uncharacterized protein LOC111808120 [Cucurbita pepo subsp. pepo] | [more] |
XP_008463128.1 | 5.6e-27 | 89.04 | PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
AT3G14430.1 | 6.9e-15 | 61.11 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... | [more] |