CmoCh15G006300 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G006300
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	DUF150 domain-containing protein
Location	Cmo_Chr15: 3053207 .. 3055915 (+)
RNA-Seq Expression	CmoCh15G006300
Synteny	CmoCh15G006300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAACATATAGTTGAATTGACATGCAATTATCCCCATTTGTTGGATTGCGCCTCTGCGGAGCGGCCGCCATAGCAGCTGTCTGTTGTGAGCTTCATCATTCCCAGTTTTCCAGTTTCCTCCGTTAAGAGAAGTGATGGTCATGATTACTGTCCGTAATTTCAGACTCTCTGCAGTTCCAATTTCATCAATCCTTCCACAGAGTGGCTTCCGTTCGTCCTTAATCTCGCCGAGAAATCTTCCCTTCCCATTTGTTGGCCATCGGTTTCCATCTACGTCGAACAATCCCTTATTACTTCATGCCAGAAAGAAAAACTCAGAATCAGAGCCAGTTATCAAACGAAACATCGTCGAGGAAGTGTCGGAGGACGAAGAAGACGATGAACTTCTCGACGAACTTGAAGACGGTAAGATCCATTAATAAAACCTTCGCTCAATTTATTCCTCTAGTTTCTATTGAATCCTAGTTTAGACTGGTCTTGGAATGAGTAAATTTCGGGGAACTTTCTTGATTGCGTAGATGAGATAATGGACGATGATGGCGAAGATTACTTTGAAGAAGAGTTTATGGAGGATAATGCTGAAGTCTATGTAAGATTCTTGCCTCTAAACATGGAGATATTGTGTTGGAAATCTTAACTGAAATTCTGGATTTGATAATTTGATTTGAAGGTAGGGGATGGCGGGGAAGGAGGTGGAATTTCCCTTGCTGGGACATGGTGGGATAAAGAAGCACTGGCTATGGCTGAAGAGGTTATTCTTTCATTTGATGGCGACTTGAAGATTTATGCTTTCAAAACAGTCTCTAATTCCACTGTTCAAGTGCGTATTGAAAAGCTTTCTAACAAGTAAGTTTTTACATTCTATGAACACATATTAGACTGTGGTTTTGGTTTTCTTGTAAGATAATAACTTCTTGTTGCTGCTTTCTTAAGAATGAAATGCCGTCTGCTAGCTCCTTCTTTCTCAAACGGATTGTTTGAGTGATGTTGATATTAGAAAATATTAGGATTTCTAATCGTAGATTTCGCTTGCTCACAAATTAAGGGAGAGAGTTCACGTTAGAGATTTAAGACGGACGTGTTTGGAATGACTTTCTAAGAGCTTAAAAATATGTTTGTAAACACTTGAAAAATCATTTCAAACAAGCTCTTATACGAGTTCAGCCGCTTCATATGGGTTAGATCCAATACGAGTTCAACCTGTACCTATCTTTTAAGCTGGAAATGGAGATGCCTTTTGCTTTCAAGTAAATCAAGAGAGCCATTAATTACCTTTTGGCTTCAAGTTTTCCTTCTGATATTAGTGTTCTCACTGACCCGTATTCACAACTCGACTCAGAGAAGAATCGGATTTCTTCGAACTCCTTATTGCTTGAATTATCACATTAATTCGAAGGATTTCCAGATATTAAGGACGTTTCGAGTTGAAGTCTACTTTAAGCATATGAAAATGTGTTATATTTTACATGTTATCCCAAGTTTACTGTTGGTGCATGCGTTCTTGGTAAGACTGAGTACCATTTCCTAGGTTCTAATTCCCAACAATGCACCTCAGATCGGGTTCCCCCAGGATGGAAGATATCGAGGCTTTCTCTTCAAGATATCGAGCACGATTGGATGAAGCAGAGCTTTCTAAAACCGTGCCAGAGAACATATCTTTAGAGGTATGCTGCCTGTTTCCTTGCTCAAATTCCCTCGTTTCTTTTTTTTCTATATCATCAACCAATCTATCTTTAGCAATTAGAAGAAGATTTTCACTTACATTATTCAATTTAGTTTCCCACTTGACAAGAGCAAAAGAGAGTTGCTCTACTCTGTTAGCTTTTGGGTCTAAATGGATTTTAATCCTTCCAACATTATAAGGTCTCATCTCCTGGTGTTGAACGCGTCGTTCGGATTCCCGATGAGCTGGATCGGTTCAAAGAAAGAGCAATGTATGTGAAATACACGAACGATGTAGTTACACCCAGTTCGTCCTCTGAGAGTGATGGCATTTTCAAGCTTGTGTCATTCAACATAGAAACAAGGTGCTGCGTTTGGGGTTTAGCAGATGTGAGGATAAATAGAGAGAAGGCAGGAAAAGGAAGACCACTAAGCAAAAAACAAAGAGAGTGGCGTTTAGAGACTCCTTTCGATTCATTACGCTTGGTTAGACTGTATTCTGATTACTGATAATGCAATCAAATTTTGGTCGAAATTCAAGGTGTCGGTGTATAGTAAACTAGTAATTATTATCTTATGAACGTATGATTCGTTTTTAATGCTATTCTCTATCTAAACACATTTTGAATACAAATTTTGTAAGATAAACGCTTAATAGTTTTTGGATTGAGTTGGTCTGGTCAACATGAACATTGATATGCATGTATTATACTTATTTGTTGTCAAATTGTTCTGATTGTATTGGTTGAATTATGAAACTTTATCTGTACTGTAATGGCATTGACTGAGGCACTCCTGGTTTGGTCCCTGCTAGAAAACGACCAATCAGTCTCTTTACCCGCGTGATGAATGAAAAACGGCTCCTTTTGTCGACACCTTTAGCTTTCTAACAATATGCTGTTTCTATACTATCTTCGTGACTTCACTTATTCATTACATGCACTGTACTTAGTTACCAAAAATATGCATCATTTTACTCATTTATTTCTTGTTGTTTTTCACTTAACTTTTCTGTTTTTGGTGTGTTAGGAAGTCATACAATTGTAA

mRNA sequence

GAAACATATAGTTGAATTGACATGCAATTATCCCCATTTGTTGGATTGCGCCTCTGCGGAGCGGCCGCCATAGCAGCTGTCTGTTGTGAGCTTCATCATTCCCAGTTTTCCAGTTTCCTCCGTTAAGAGAAGTGATGGTCATGATTACTGTCCGTAATTTCAGACTCTCTGCAGTTCCAATTTCATCAATCCTTCCACAGAGTGGCTTCCGTTCGTCCTTAATCTCGCCGAGAAATCTTCCCTTCCCATTTGTTGGCCATCGGTTTCCATCTACGTCGAACAATCCCTTATTACTTCATGCCAGAAAGAAAAACTCAGAATCAGAGCCAGTTATCAAACGAAACATCGTCGAGGAAGTGTCGGAGGACGAAGAAGACGATGAACTTCTCGACGAACTTGAAGACGATGAGATAATGGACGATGATGGCGAAGATTACTTTGAAGAAGAGTTTATGGAGGATAATGCTGAAGTCTATGTAGGGGATGGCGGGGAAGGAGGTGGAATTTCCCTTGCTGGGACATGGTGGGATAAAGAAGCACTGGCTATGGCTGAAGAGGTTATTCTTTCATTTGATGGCGACTTGAAGATTTATGCTTTCAAAACAGTCTCTAATTCCACTGTTCAAGTGCGTATTGAAAAGCTTTCTAACAAATCGGGTTCCCCCAGGATGGAAGATATCGAGGCTTTCTCTTCAAGATATCGAGCACGATTGGATGAAGCAGAGCTTTCTAAAACCGTGCCAGAGAACATATCTTTAGAGGTCTCATCTCCTGGTGTTGAACGCGTCGTTCGGATTCCCGATGAGCTGGATCGGTTCAAAGAAAGAGCAATGTATGTGAAATACACGAACGATGTAGTTACACCCAGTTCGTCCTCTGAGAGTGATGGCATTTTCAAGCTTGTGTCATTCAACATAGAAACAAGGTGCTGCGTTTGGGGTTTAGCAGATGTGAGGATAAATAGAGAGAAGGCAGGAAAAGGAAGACCACTAAGCAAAAAACAAAGAGAGTGGCGTTTAGAGACTCCTTTCGATTCATTACGCTTGGAAGTCATACAATTGTAA

Coding sequence (CDS)

ATGGTCATGATTACTGTCCGTAATTTCAGACTCTCTGCAGTTCCAATTTCATCAATCCTTCCACAGAGTGGCTTCCGTTCGTCCTTAATCTCGCCGAGAAATCTTCCCTTCCCATTTGTTGGCCATCGGTTTCCATCTACGTCGAACAATCCCTTATTACTTCATGCCAGAAAGAAAAACTCAGAATCAGAGCCAGTTATCAAACGAAACATCGTCGAGGAAGTGTCGGAGGACGAAGAAGACGATGAACTTCTCGACGAACTTGAAGACGATGAGATAATGGACGATGATGGCGAAGATTACTTTGAAGAAGAGTTTATGGAGGATAATGCTGAAGTCTATGTAGGGGATGGCGGGGAAGGAGGTGGAATTTCCCTTGCTGGGACATGGTGGGATAAAGAAGCACTGGCTATGGCTGAAGAGGTTATTCTTTCATTTGATGGCGACTTGAAGATTTATGCTTTCAAAACAGTCTCTAATTCCACTGTTCAAGTGCGTATTGAAAAGCTTTCTAACAAATCGGGTTCCCCCAGGATGGAAGATATCGAGGCTTTCTCTTCAAGATATCGAGCACGATTGGATGAAGCAGAGCTTTCTAAAACCGTGCCAGAGAACATATCTTTAGAGGTCTCATCTCCTGGTGTTGAACGCGTCGTTCGGATTCCCGATGAGCTGGATCGGTTCAAAGAAAGAGCAATGTATGTGAAATACACGAACGATGTAGTTACACCCAGTTCGTCCTCTGAGAGTGATGGCATTTTCAAGCTTGTGTCATTCAACATAGAAACAAGGTGCTGCGTTTGGGGTTTAGCAGATGTGAGGATAAATAGAGAGAAGGCAGGAAAAGGAAGACCACTAAGCAAAAAACAAAGAGAGTGGCGTTTAGAGACTCCTTTCGATTCATTACGCTTGGAAGTCATACAATTGTAA

Protein sequence

MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKNSESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGEGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRMEDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNDVVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFDSLRLEVIQL

Homology

[Close]

BLAST of CmoCh15G006300 vs. ExPASy Swiss-Prot
Match: B0SH16 (Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) OX=355278 GN=rimP PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.9e-04
Identity = 24/71 (33.80%), Postives = 46/71 (64.79%), Query Frame = 0


Query: 159 SNSTVQVRIEKLSNKSGSPRMEDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERV 218
           +++ +++ ++ L++K+GS  +ED E  S R +  LD+         + +L+VSS G ERV
Sbjct: 32  NHALIEIELDHLTDKTGSASLEDCETVSRRLKEELDQ----WGEEFDFTLQVSSAGAERV 91

Query: 219 VRIPDELDRFK 230
           +R+P++L RF+
Sbjct: 92  LRLPEDLIRFQ 98

[Close]

BLAST of CmoCh15G006300 vs. ExPASy Swiss-Prot
Match: B0SQH2 (Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) OX=456481 GN=rimP PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.9e-04
Identity = 24/71 (33.80%), Postives = 46/71 (64.79%), Query Frame = 0


Query: 159 SNSTVQVRIEKLSNKSGSPRMEDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERV 218
           +++ +++ ++ L++K+GS  +ED E  S R +  LD+         + +L+VSS G ERV
Sbjct: 32  NHALIEIELDHLTDKTGSASLEDCETVSRRLKEELDQ----WGEEFDFTLQVSSAGAERV 91

Query: 219 VRIPDELDRFK 230
           +R+P++L RF+
Sbjct: 92  LRLPEDLIRFQ 98

[Close]

BLAST of CmoCh15G006300 vs. ExPASy TrEMBL
Match: A0A6J1FM02 (uncharacterized protein LOC111445430 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445430 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.1e-165
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0


Query: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60
           MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN
Sbjct: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120
           SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120

Query: 121 GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180
           GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME
Sbjct: 121 GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180

Query: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240
           DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND
Sbjct: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240

Query: 241 VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300
           VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD
Sbjct: 241 VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300

Query: 301 SLRLEVIQL 310
           SLRLEVIQL
Sbjct: 301 SLRLEVIQL 309

[Close]

BLAST of CmoCh15G006300 vs. ExPASy TrEMBL
Match: A0A6J1FGA6 (uncharacterized protein LOC111445430 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445430 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60
           MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN
Sbjct: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120
           SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120

Query: 121 GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180
           GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME
Sbjct: 121 GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180

Query: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240
           DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND
Sbjct: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240

Query: 241 VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300
           VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD
Sbjct: 241 VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300

Query: 301 SLRL 305
           SLRL
Sbjct: 301 SLRL 304

[Close]

BLAST of CmoCh15G006300 vs. ExPASy TrEMBL
Match: A0A6J1FH63 (uncharacterized protein LOC111445430 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445430 PE=3 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60
           MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN
Sbjct: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120
           SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120

Query: 121 GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180
           GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME
Sbjct: 121 GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180

Query: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240
           DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND
Sbjct: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240

Query: 241 VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300
           VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD
Sbjct: 241 VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300

Query: 301 SLRL 305
           SLRL
Sbjct: 301 SLRL 304

[Close]

BLAST of CmoCh15G006300 vs. ExPASy TrEMBL
Match: A0A6J1K1G2 (uncharacterized protein LOC111489765 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489765 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.4e-160
Identity = 303/310 (97.74%), Postives = 306/310 (98.71%), Query Frame = 0


Query: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60
           MV+ITV NFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN
Sbjct: 1   MVLITVGNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVIKRNIVEEVSEDEEDDELLDEL-EDDEIMDDDGEDYFEEEFMEDNAEVYVGDGG 120
           SESEPVIKRNIVEEVSEDEEDD LLDEL EDDEIMDDDGEDYFEEEFMEDNAEVYVGDGG
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDVLLDELDEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGG 120

Query: 121 EGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRM 180
           EGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRM
Sbjct: 121 EGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRM 180

Query: 181 EDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTN 240
           EDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKY N
Sbjct: 181 EDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYAN 240

Query: 241 DVVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPF 300
           DVVTPSSSSESDGIFKLVSF+IETRCC+WGLADVRINREKAGKGRPLSKKQREWRLETPF
Sbjct: 241 DVVTPSSSSESDGIFKLVSFDIETRCCIWGLADVRINREKAGKGRPLSKKQREWRLETPF 300

Query: 301 DSLRLEVIQL 310
           DSLRLEVIQL
Sbjct: 301 DSLRLEVIQL 310

[Close]

BLAST of CmoCh15G006300 vs. ExPASy TrEMBL
Match: A0A6J1K3N1 (uncharacterized protein LOC111489765 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489765 PE=3 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 4.8e-158
Identity = 298/305 (97.70%), Postives = 301/305 (98.69%), Query Frame = 0


Query: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60
           MV+ITV NFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN
Sbjct: 1   MVLITVGNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVIKRNIVEEVSEDEEDDELLDEL-EDDEIMDDDGEDYFEEEFMEDNAEVYVGDGG 120
           SESEPVIKRNIVEEVSEDEEDD LLDEL EDDEIMDDDGEDYFEEEFMEDNAEVYVGDGG
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDVLLDELDEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGG 120

Query: 121 EGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRM 180
           EGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRM
Sbjct: 121 EGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRM 180

Query: 181 EDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTN 240
           EDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKY N
Sbjct: 181 EDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYAN 240

Query: 241 DVVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPF 300
           DVVTPSSSSESDGIFKLVSF+IETRCC+WGLADVRINREKAGKGRPLSKKQREWRLETPF
Sbjct: 241 DVVTPSSSSESDGIFKLVSFDIETRCCIWGLADVRINREKAGKGRPLSKKQREWRLETPF 300

Query: 301 DSLRL 305
           DSLRL
Sbjct: 301 DSLRL 305

[Close]

BLAST of CmoCh15G006300 vs. NCBI nr
Match: XP_022939573.1 (uncharacterized protein LOC111445430 isoform X3 [Cucurbita moschata])

HSP 1 Score: 590.9 bits (1522), Expect = 6.4e-165
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0


Query: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60
           MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN
Sbjct: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120
           SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120

Query: 121 GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180
           GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME
Sbjct: 121 GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180

Query: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240
           DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND
Sbjct: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240

Query: 241 VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300
           VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD
Sbjct: 241 VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300

Query: 301 SLRLEVIQL 310
           SLRLEVIQL
Sbjct: 301 SLRLEVIQL 309

[Close]

BLAST of CmoCh15G006300 vs. NCBI nr
Match: XP_022939571.1 (uncharacterized protein LOC111445430 isoform X1 [Cucurbita moschata])

HSP 1 Score: 582.4 bits (1500), Expect = 2.3e-162
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60
           MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN
Sbjct: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120
           SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120

Query: 121 GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180
           GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME
Sbjct: 121 GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180

Query: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240
           DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND
Sbjct: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240

Query: 241 VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300
           VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD
Sbjct: 241 VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300

Query: 301 SLRL 305
           SLRL
Sbjct: 301 SLRL 304

[Close]

BLAST of CmoCh15G006300 vs. NCBI nr
Match: XP_022939572.1 (uncharacterized protein LOC111445430 isoform X2 [Cucurbita moschata])

HSP 1 Score: 582.4 bits (1500), Expect = 2.3e-162
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60
           MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN
Sbjct: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120
           SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120

Query: 121 GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180
           GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME
Sbjct: 121 GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180

Query: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240
           DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND
Sbjct: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240

Query: 241 VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300
           VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD
Sbjct: 241 VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300

Query: 301 SLRL 305
           SLRL
Sbjct: 301 SLRL 304

[Close]

BLAST of CmoCh15G006300 vs. NCBI nr
Match: XP_022993909.1 (uncharacterized protein LOC111489765 isoform X2 [Cucurbita maxima])

HSP 1 Score: 575.5 bits (1482), Expect = 2.8e-160
Identity = 303/310 (97.74%), Postives = 306/310 (98.71%), Query Frame = 0


Query: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60
           MV+ITV NFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN
Sbjct: 1   MVLITVGNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVIKRNIVEEVSEDEEDDELLDEL-EDDEIMDDDGEDYFEEEFMEDNAEVYVGDGG 120
           SESEPVIKRNIVEEVSEDEEDD LLDEL EDDEIMDDDGEDYFEEEFMEDNAEVYVGDGG
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDVLLDELDEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGG 120

Query: 121 EGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRM 180
           EGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRM
Sbjct: 121 EGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRM 180

Query: 181 EDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTN 240
           EDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKY N
Sbjct: 181 EDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYAN 240

Query: 241 DVVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPF 300
           DVVTPSSSSESDGIFKLVSF+IETRCC+WGLADVRINREKAGKGRPLSKKQREWRLETPF
Sbjct: 241 DVVTPSSSSESDGIFKLVSFDIETRCCIWGLADVRINREKAGKGRPLSKKQREWRLETPF 300

Query: 301 DSLRLEVIQL 310
           DSLRLEVIQL
Sbjct: 301 DSLRLEVIQL 310

[Close]

BLAST of CmoCh15G006300 vs. NCBI nr
Match: XP_023550697.1 (uncharacterized protein LOC111808765 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 572.8 bits (1475), Expect = 1.8e-159
Identity = 299/304 (98.36%), Postives = 301/304 (99.01%), Query Frame = 0


Query: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKN 60
           MVMITVRNFRLSAVPISSILPQSGFRSSLIS RNLPFPFVGHRFPSTSNNPLLLHARKKN
Sbjct: 1   MVMITVRNFRLSAVPISSILPQSGFRSSLISSRNLPFPFVGHRFPSTSNNPLLLHARKKN 60

Query: 61  SESEPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120
           SESEPVIKRNIVEEVSEDEEDDEL DELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE
Sbjct: 61  SESEPVIKRNIVEEVSEDEEDDELFDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGE 120

Query: 121 GGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180
           GGGISLAGTWWDKEALAMAEEVILSF GDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME
Sbjct: 121 GGGISLAGTWWDKEALAMAEEVILSFHGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRME 180

Query: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240
           DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND
Sbjct: 181 DIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTND 240

Query: 241 VVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300
           VVTPSSSSESDGIFKLVSF+IETRCC+WGLADVRINREKAGKGRPLSKKQREWRLETPFD
Sbjct: 241 VVTPSSSSESDGIFKLVSFDIETRCCIWGLADVRINREKAGKGRPLSKKQREWRLETPFD 300

Query: 301 SLRL 305
           SLRL
Sbjct: 301 SLRL 304

[Close]

BLAST of CmoCh15G006300 vs. TAIR 10
Match: AT1G77122.1 (Uncharacterised protein family UPF0090 )

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-82
Identity = 176/308 (57.14%), Postives = 223/308 (72.40%), Query Frame = 0


Query: 11  LSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKNSES--EP--- 70
           L A  IS++   + FRS+     +L F F    F  T N     HA++KN  S  EP   
Sbjct: 19  LPAFSISNLSAVNRFRST----TSLRFGFPATPFRRTPNFTFKTHAKRKNKTSTFEPKPN 78

Query: 71  VIKRNIVEEVSEDEEDDELL---------DELEDDEIMDDDGEDYFEEEFMEDNAEVYVG 130
            ++  I+EE  E+EE++E++         DEL  D+  D+D +D F  EF E   E+Y G
Sbjct: 79  KVEELIIEEEEEEEEEEEIVLPEEIQENQDELLLDDEYDEDDDDDF--EFDESEEELYAG 138

Query: 131 DGGEGGGISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGS 190
           DGG GGGI LAGT WDK ALA+A +V  SFDGDL IYAFKT+ NST+QVRIE+L+NK GS
Sbjct: 139 DGGGGGGIKLAGTLWDKVALALAVKVCESFDGDLGIYAFKTLPNSTIQVRIERLTNKFGS 198

Query: 191 PRMEDIEAFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVK 250
           P MEDIEAFS+ YRA+L EAEL+K++P+NISLEVSSPGVERVVRIP +LDR+K+R MYV+
Sbjct: 199 PTMEDIEAFSTIYRAKLAEAELAKSIPDNISLEVSSPGVERVVRIPQDLDRYKDRPMYVR 258

Query: 251 YTNDVVTPSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLE 305
           YTN+     + +E DGIF+LVSF++E + C+WG+AD+R+NREKAGKGRPLSKKQREWRLE
Sbjct: 259 YTNE----DTETEGDGIFRLVSFDVEAKICIWGIADIRVNREKAGKGRPLSKKQREWRLE 316

[Close]

BLAST of CmoCh15G006300 vs. TAIR 10
Match: AT1G69210.1 (Uncharacterised protein family UPF0090 )

HSP 1 Score: 174.1 bits (440), Expect = 1.7e-43
Identity = 113/296 (38.18%), Postives = 171/296 (57.77%), Query Frame = 0


Query: 4   ITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKNSES 63
           I+VR F  S      +LP++  R +L  PR  PF      F S+S++P       K + S
Sbjct: 26  ISVRTFSSSL-----LLPKTTTRLTL--PRYFPFSSSISTFSSSSSSPSPSARPPKTAGS 85

Query: 64  EPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGEGGG 123
                       + DEED       +D E+++D  ED       +++ E  +GDGG+GGG
Sbjct: 86  ------------NGDEEDTFEYKATDDVEVIEDWEED------EDEDVESQLGDGGDGGG 145

Query: 124 ISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRMEDIE 183
           I L G  W +  L++A +V+   + DL+++AFKT     + VR++KLS + G P M+++E
Sbjct: 146 IVLKGVAWGERVLSIAAQVLKQSEKDLELFAFKTSPRGYIYVRLDKLSTEYGCPTMDELE 205

Query: 184 AFSSRYRARLDEAELSKTVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNDVVT 243
            FS  ++ RLD+A   K +PE+++LEVSSPG ER++R+P++L RFK+  M V Y  +  T
Sbjct: 206 EFSREFKKRLDDAGAEKVIPEDLALEVSSPGAERLLRVPEDLPRFKDMPMTVSYVEE--T 265

Query: 244 PSSSSESDGIFKLVSFNIETRCCVWGLADVRINREKAGKGRPLSKKQREWRLETPF 300
            S  +   G+F L S + E+  CVW LADVR NR+   KGRPLS+KQ++ R+  PF
Sbjct: 266 NSRKAVKSGVFLLESIDAESDNCVWKLADVRENRDPESKGRPLSRKQKDLRITLPF 294

[Close]

BLAST of CmoCh15G006300 vs. TAIR 10
Match: AT1G69210.2 (Uncharacterised protein family UPF0090 )

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-18
Identity = 70/207 (33.82%), Postives = 112/207 (54.11%), Query Frame = 0


Query: 4   ITVRNFRLSAVPISSILPQSGFRSSLISPRNLPFPFVGHRFPSTSNNPLLLHARKKNSES 63
           I+VR F  S      +LP++  R +L  PR  PF      F S+S++P       K + S
Sbjct: 26  ISVRTFSSSL-----LLPKTTTRLTL--PRYFPFSSSISTFSSSSSSPSPSARPPKTAGS 85

Query: 64  EPVIKRNIVEEVSEDEEDDELLDELEDDEIMDDDGEDYFEEEFMEDNAEVYVGDGGEGGG 123
                       + DEED       +D E+++D  ED       +++ E  +GDGG+GGG
Sbjct: 86  ------------NGDEEDTFEYKATDDVEVIEDWEED------EDEDVESQLGDGGDGGG 145

Query: 124 ISLAGTWWDKEALAMAEEVILSFDGDLKIYAFKTVSNSTVQVRIEKLSNKSGSPRMEDIE 183
           I L G  W +  L++A +V+   + DL+++AFKT     + VR++KLS + G P M+++E
Sbjct: 146 IVLKGVAWGERVLSIAAQVLKQSEKDLELFAFKTSPRGYIYVRLDKLSTEYGCPTMDELE 205

Query: 184 AFSSRYRARLDEAELSKTVPENISLEV 211
            FS  ++ RLD+A   K +PE+++LEV
Sbjct: 206 EFSREFKKRLDDAGAEKVIPEDLALEV 207

The following BLAST results are available for this feature:

BLAST of CmoCh15G006300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B0SH16	5.9e-04	33.80	Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Pato...	[more]
B0SQH2	5.9e-04	33.80	Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Pato...	[more]

BLAST of CmoCh15G006300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FM02	3.1e-165	100.00	uncharacterized protein LOC111445430 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FGA6	1.1e-162	100.00	uncharacterized protein LOC111445430 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FH63	1.1e-162	100.00	uncharacterized protein LOC111445430 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K1G2	1.4e-160	97.74	uncharacterized protein LOC111489765 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1K3N1	4.8e-158	97.70	uncharacterized protein LOC111489765 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CmoCh15G006300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939573.1	6.4e-165	100.00	uncharacterized protein LOC111445430 isoform X3 [Cucurbita moschata]	[more]
XP_022939571.1	2.3e-162	100.00	uncharacterized protein LOC111445430 isoform X1 [Cucurbita moschata]	[more]
XP_022939572.1	2.3e-162	100.00	uncharacterized protein LOC111445430 isoform X2 [Cucurbita moschata]	[more]
XP_022993909.1	2.8e-160	97.74	uncharacterized protein LOC111489765 isoform X2 [Cucurbita maxima]	[more]
XP_023550697.1	1.8e-159	98.36	uncharacterized protein LOC111808765 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh15G006300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77122.1	1.1e-82	57.14	Uncharacterised protein family UPF0090	[more]
AT1G69210.1	1.7e-43	38.18	Uncharacterised protein family UPF0090	[more]
AT1G69210.2	1.9e-18	33.82	Uncharacterised protein family UPF0090	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028989	Ribosome maturation factor RimP, N-terminal	PFAM	PF02576	DUF150	coord: 155..216 e-value: 7.4E-7 score: 29.5
None	No IPR available	PANTHER	PTHR34544	OSJNBA0006B20.18 PROTEIN	coord: 32..304
None	No IPR available	PANTHER	PTHR34544:SF1	OSJNBA0006B20.18 PROTEIN	coord: 32..304
IPR035956	RimP, N-terminal domain superfamily	SUPERFAMILY	75420	YhbC-like, N-terminal domain	coord: 155..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G006300.1	CmoCh15G006300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042274	ribosomal small subunit biogenesis
cellular_component	GO:0005737	cytoplasm