
CmoCh15G001890 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAAAAGGGTGATTTTGAAAAATGGAATCTGAGTTGTTCTCGTTATTTCCACCGTTTTGATTATCAAGTGTCATTTAGTCTCCTGTCTCTACGCTCCCTGTTACTGTAATCTGTTCTTGTTCTTTCAAAAAATTTCTCATTGTCCTCTACGTTTCTTCGCTCTCGATCTGCCCCCACTTTCCCGCAATCAATCACACTTGCTTTTCAACTTTCCGACTTACGATTGAGTTCCAGATCTCTTTGTGCTCTTCATCAACTTCGAAGTTCATCAGGTACTGCCTCCTCTGCTTTACTTTTTCTAATTTGTTTCAAGGATTGGTTCGGCTTGTGTGTTGTTTTTTGGATTTGGTGTTGTTTTGGAGTAGATTTTTTGGTGATTGCTTTAACCTGCGAAGACTCCTTTTGGTTTGGGTGATCTTGATGAAATTAATTTCAGATGTGTAGTTTTGTTGATGGATTCTGCATATTTGATTGTACTTTTAAATTTATAGCTGTGTTTGCTTAATTGTTACTATATCCATGAAGGAATTGTTCAAGGCTCTTCTTCGAACTCTGTGTTGAATGTATTTTCCTGATTGAAGGATTTCCTGCAGATTCTTCGATCGTGCTTGTGTTCGTATGGAAAATCCGGAATTGAAGAATCTGAAACCATTTTGGCCTGAGGCTGACATTCAGAACAGATCTAAATGGCTATCAGTTAGTCTTGAAGGTAAGCAGTATTTATGATCGAATTTTCTGGTTCCTTGTCCAAGCCTAACGCAATAAGCCTTCGTTCTTTAGTGGTAGGAAATGTTATCAGCTCAAATCGGTTTCTACATGTGCAGAACCTTCTTCTATTACTTTTCTCGTTGTCACTAAGATTGATTTGTGTTCTATAA ATGAGAAAAAGGTCTCCTGTCTCTACGCTCCCTGTTACTGTAATCTGTTCTTGTTCTTTCAAAAAATTTCTCATTGTCCTCTACGTTTCTTCGCTCTCGATCTGCCCCCACTTTCCCGCAATCAATCACACTTGCTTTTCAACTTTCCGACTTACGATTGAGTTCCAGATCTCTTTGTGCTCTTCATCAACTTCGAAGTTCATCAGATTCTTCGATCGTGCTTGTGTTCGTATGGAAAATCCGGAATTGAAGAATCTGAAACCATTTTGGCCTGAGGCTGACATTCAGAACAGATCTAAATGGCTATCAGTTAGTCTTGAAGTATTTATGATCGAATTTTCTGGTTCCTTGTCCAAGCCTAACGCAATAAGCCTTCGTTCTTTAGTGGTAGGAAATGTTATCAGCTCAAATCGGTTTCTACATGTGCAGAACCTTCTTCTATTACTTTTCTCGTTGTCACTAAGATTGATTTGTGTTCTATAA ATGAGAAAAAGGTCTCCTGTCTCTACGCTCCCTGTTACTGTAATCTGTTCTTGTTCTTTCAAAAAATTTCTCATTGTCCTCTACGTTTCTTCGCTCTCGATCTGCCCCCACTTTCCCGCAATCAATCACACTTGCTTTTCAACTTTCCGACTTACGATTGAGTTCCAGATCTCTTTGTGCTCTTCATCAACTTCGAAGTTCATCAGATTCTTCGATCGTGCTTGTGTTCGTATGGAAAATCCGGAATTGAAGAATCTGAAACCATTTTGGCCTGAGGCTGACATTCAGAACAGATCTAAATGGCTATCAGTTAGTCTTGAAGTATTTATGATCGAATTTTCTGGTTCCTTGTCCAAGCCTAACGCAATAAGCCTTCGTTCTTTAGTGGTAGGAAATGTTATCAGCTCAAATCGGTTTCTACATGTGCAGAACCTTCTTCTATTACTTTTCTCGTTGTCACTAAGATTGATTTGTGTTCTATAA MRKRSPVSTLPVTVICSCSFKKFLIVLYVSSLSICPHFPAINHTCFSTFRLTIEFQISLCSSSTSKFIRFFDRACVRMENPELKNLKPFWPEADIQNRSKWLSVSLEVFMIEFSGSLSKPNAISLRSLVVGNVISSNRFLHVQNLLLLLFSLSLRLICVL Homology
BLAST of CmoCh15G001890 vs. ExPASy TrEMBL
Match: A0A0A0KXR2 (NAB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645160 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 5.4e-12 Identity = 55/100 (55.00%), Postives = 59/100 (59.00%), Query Frame = 0
BLAST of CmoCh15G001890 vs. ExPASy TrEMBL
Match: A0A6J1FN40 (protein NETWORKED 4A-like OS=Cucurbita moschata OX=3662 GN=LOC111445431 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 4.7e-08 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of CmoCh15G001890 vs. ExPASy TrEMBL
Match: A0A6J1JXC2 (protein NETWORKED 4A OS=Cucurbita maxima OX=3661 GN=LOC111489163 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 6.2e-08 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of CmoCh15G001890 vs. ExPASy TrEMBL
Match: A0A1S3CAE2 (protein NETWORKED 4A OS=Cucumis melo OX=3656 GN=LOC103498608 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 3.2e-04 Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0
BLAST of CmoCh15G001890 vs. ExPASy TrEMBL
Match: A0A6J1EC39 (protein NETWORKED 4A-like OS=Cucurbita moschata OX=3662 GN=LOC111431199 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 7.1e-04 Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = 0
BLAST of CmoCh15G001890 vs. NCBI nr
Match: KAG7016055.1 (Protein NETWORKED 4A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 103.2 bits (256), Expect = 2.1e-18 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0
BLAST of CmoCh15G001890 vs. NCBI nr
Match: KAG6578490.1 (Protein NETWORKED 4A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 99.4 bits (246), Expect = 3.0e-17 Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = 0
BLAST of CmoCh15G001890 vs. NCBI nr
Match: XP_023551275.1 (protein NETWORKED 4A-like [Cucurbita pepo subsp. pepo] >XP_023551276.1 protein NETWORKED 4A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 67.8 bits (164), Expect = 9.8e-08 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of CmoCh15G001890 vs. NCBI nr
Match: XP_022939575.1 (protein NETWORKED 4A-like [Cucurbita moschata] >XP_022939576.1 protein NETWORKED 4A-like [Cucurbita moschata]) HSP 1 Score: 67.8 bits (164), Expect = 9.8e-08 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of CmoCh15G001890 vs. NCBI nr
Match: XP_022993014.1 (protein NETWORKED 4A [Cucurbita maxima] >XP_022993015.1 protein NETWORKED 4A [Cucurbita maxima]) HSP 1 Score: 67.4 bits (163), Expect = 1.3e-07 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|