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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCAAGACACAGTTACTCGAAAATTTCAAATGTTCAAATTAAACGATTTCTTGATTTAAAAAGTCTTGCTCAAATTCCAGTAGCCCGTTGATGTAGAACATACTCCAGAGTTCTTCCACTAGTCGGCTAAGAGAAGAATTTCAATCATAGGTTTCAATCTTATGGTATTATGATTCTTATTTTAGTTATTACACGTTTGAGCACGTTGATTTTTGGAGTATTTCATGCTTTGATACTCAATCATTTAAGGTACAAGGTCTTAATCCGCTATTGATGATCATACGATAAAATTGAATTCTTAGCAGTCTCGAAATAGAACATGGGGAAGAAAATGGGCACTGTCTCGGAGAGAGGCTCGATGAAATAGATATGTCTGTGAAGATGTGGACTACCTGCACGTGGACAGAAAAACCCTATGAAGCTTATAAATCCTCATATGACCAGTAA mRNA sequence ATGTCAAGACACAGTTACTCGAAAATTTCAAATGTTCAAATTAAACGATTTCTTGATTTAAAAAGTCTTGCTCAAATTCCAGTAGCCCTTATTACACGTTTGAGCACGTTGATTTTTGGAGTATTTCATGCTTTGATACTCAATCATTTAAGTCTCGAAATAGAACATGGGGAAGAAAATGGGCACTGTCTCGGAGAGAGGCTCGATGAAATAGATATGTCTGTGAAGATGTGGACTACCTGCACGTGGACAGAAAAACCCTATGAAGCTTATAAATCCTCATATGACCAGTAA Coding sequence (CDS) ATGTCAAGACACAGTTACTCGAAAATTTCAAATGTTCAAATTAAACGATTTCTTGATTTAAAAAGTCTTGCTCAAATTCCAGTAGCCCTTATTACACGTTTGAGCACGTTGATTTTTGGAGTATTTCATGCTTTGATACTCAATCATTTAAGTCTCGAAATAGAACATGGGGAAGAAAATGGGCACTGTCTCGGAGAGAGGCTCGATGAAATAGATATGTCTGTGAAGATGTGGACTACCTGCACGTGGACAGAAAAACCCTATGAAGCTTATAAATCCTCATATGACCAGTAA Protein sequence MSRHSYSKISNVQIKRFLDLKSLAQIPVALITRLSTLIFGVFHALILNHLSLEIEHGEENGHCLGERLDEIDMSVKMWTTCTWTEKPYEAYKSSYDQ
Homology
BLAST of CmoCh14G008420 vs. ExPASy TrEMBL
Match: A0A5K1APN9 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS13534 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.6e-06 Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 0 Query: 60 NGHCLGERLDEIDMSVKMWTTCTWTEKPYEA 91 +GHCLGERL EIDMSVKM TCTWTE+PYEA Sbjct: 2 SGHCLGERLGEIDMSVKMQATCTWTERPYEA 32
BLAST of CmoCh14G008420 vs. ExPASy TrEMBL
Match: A0A5A7TL99 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003750 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 7.8e-06 Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0 Query: 62 HCLGERLDEIDMSVKMWTTCTWTEKPYEA 91 HCLGERLDEIDMSVKM TTC WT++PYEA Sbjct: 15 HCLGERLDEIDMSVKMRTTCNWTKRPYEA 43
BLAST of CmoCh14G008420 vs. ExPASy TrEMBL
Match: V7B8W8 (Uncharacterized protein (Fragment) OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G246600g PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.3e-05 Identity = 23/31 (74.19%), Postives = 27/31 (87.10%), Query Frame = 0 Query: 60 NGHCLGERLDEIDMSVKMWTTCTWTEKPYEA 91 +GHCLG+R EI+M VKMWTTCTWTE+ YEA Sbjct: 2 SGHCLGDRFGEINMFVKMWTTCTWTERAYEA 32
BLAST of CmoCh14G008420 vs. ExPASy TrEMBL
Match: A0A2P5CC96 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_165040 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 8.7e-05 Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 0 Query: 62 HCLGERLDEIDMSVKMWTTCTWTEKPYEA 91 H LGERL EIDMSVKM TTCTWTE+PYEA Sbjct: 1 HYLGERLGEIDMSVKMRTTCTWTERPYEA 29
BLAST of CmoCh14G008420 vs. ExPASy TrEMBL
Match: A0A4D6NSC2 (Uncharacterized protein family Ycf1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g1670 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.3e-04 Identity = 24/28 (85.71%), Postives = 25/28 (89.29%), Query Frame = 0 Query: 63 CLGERLDEIDMSVKMWTTCTWTEKPYEA 91 CLGERL EIDMSVKM TTCTWT+ PYEA Sbjct: 565 CLGERLGEIDMSVKMQTTCTWTKIPYEA 592
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5K1APN9 | 1.6e-06 | 83.87 | Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS13... | [more] |
A0A5A7TL99 | 7.8e-06 | 86.21 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
V7B8W8 | 1.3e-05 | 74.19 | Uncharacterized protein (Fragment) OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G24... | [more] |
A0A2P5CC96 | 8.7e-05 | 86.21 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A4D6NSC2 | 3.3e-04 | 85.71 | Uncharacterized protein family Ycf1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g1... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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