CmoCh13G002710 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G002710
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Cmo_Chr13: 2211580 .. 2216522 (-)
RNA-Seq Expression	CmoCh13G002710
Synteny	CmoCh13G002710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTTTTTTGGAAAATTTGTATGGCCATGAGAGCTTATGCTTAGAGTGGACAATAACTTACCAGTGTGATTCCTAACATGGTATCAAAGTCACGACTTTCACTTAGTCCTGTCAATAGAATTCTCGAAGTATTGAACAATGTGTAATCAAAAGTGACTCAAGTTTCGACTTGTTAATATTAATTTATATTGTTTTAAAATTTTAAAAAACAAATGACCTTTAATATTAATTTCGATTTTGATTTAAAACAATTTAGAGAAACAAGGATGTCAATTTGTATTTCTTTTTTTATTTATTAATATTGGTATAATCACTATATGGTAAAAAGAATTCAAAATTGTCACATTAAATTTTAATTAAAAATAAATCCGGATATATGTTATACAATTTATTTATTATTAAATGAATATATTGATTCATTTTAATTATAAAATGAAAATAAAAAGTTATTTATTTATTTATATATAAAAGAAAAAGGAAGTGCAAAAAAAAAAAACTTTTAATATTAGGAATATCTTGGGCATTTAAGTAAATTTATACAGATGGTATTATGGTAATTTTACCATTTATCTTCGTTGAGTTAGGGCTGAAAATCACCATAGCCATAGCGTGAGGGCAAAAGAATAGCACGCAGGCGCTGGAACGGAGAAGAAAACTGGCAGATCAGTGGCGTGGGTGGCTTCGGTGAAGAAGCAGGGCTGTGTAGGTCTCGGTTTAGGGGGCTGAATCGTGACGCCGTGAGTCTCAGTGTAGAGGACTGTGACTCGCCGCCGTGTGTCTCAGCTCAGCGGCGGTTTGAGCGTCGTTGTGGGCGTCAGTTCCATTTGCTTGGAAGCTTTAAGATATCGATTACAGGGGCAGCCAGAAATGGGTCCTTTTTAAGATGAAATCGACGGTAACCTTGATGTTAACAATCGGTGGAGATTGTGGTTAGCTTTCAGGGGAATCTGATTCTCAGTTTGTGTGGGTTAATTGCTTCATTGTATCTCTGTATTAACGACTTGATGCTCTTACACTGTAAGTGGAGACTGCTGTCTGCTAGGAATGTTCTGCATTACTCGTACACTGTAAGTGGTACCTCTAAATTTCTTCCGTTCTTGTTTGTTTGTGTAATATTGCTCCGGAAATCGATTGTTTTGCTGTGAACTGTGTTTGTTACCAATTAGATTGGAAGAAGAATTCTGTTGTATATCTAAGTTCTGAAGTTGATGGATGTGTAAGAATGTCCAAATTAGAGTTCATGGCAGTAGTTTGTAGATGTTCTTGATAGGTGGAATCCAGATTATTTCTCAGTCTCTTCTAGGTCTTGATTATTGGACTTTTTGATATAGTAACCTTAGCCAGTTGGGTCTCCGAACCCTCATAACTCTCATGGATATTCTAACCCCTAGATAACGAATGCGAAAACTCCCAAATCAAGCTGATTTCATTTCAAATGATGGATACCACTTGTCACAATTACGGGACAGTGATTGTGGTTACTTGTTCTATCCCAACGAACAAATTAGTTGTGAGAAATTCAAACTTCGCGGACAATGTTGGCCTTCCACGTTTGAGAAAAATGCTTTGGAAAACATGAGCCAAAAAATATGTTGGAAACAATTTGAAAGAAAACAATGTTATAAGCTATAAAAGTGATTAGGCCACCACAATGGCTTTGATAGCATATAACCCGTGTAGGAAGACACTCTTGGGAATTCAATCTAGCAACCTTATTGAAGAATAAGACCTTTAGATCTAAACTATCCTAGAACCTCAAAACAATAAGGAAACACCTCAAGGGAAAGTAAGATCCAAATAACTGTGTTGATCAAATATCTCCAGCGAAAGAAACTTCTTTGAGATTTTAATTAGTCCATAAGTAACATCGATCATGTCAAACTAGAATGATTTTAAGCACTTAATCGACATACGATTGCAAAGAAACTTAGCATTGCCTAAAAGATAGCAGAAACTCTCTTTTTACTACATTTTCCAGGTCTAAACCCTTGACTTTCCATGCAACGGCCTAAACCCACCGCTAGTAGATATTGTCCTCTTTGAGCTTTTCCTTTCGGGCTTCCGCTCAAGGCTTTTAAAACGCATCTGCTAGAGAGAGGTTTCCACAACCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCAATGTGGGATCTCACAGTCCACCCCCCTTCAGGGTCCAGCGTCCTCGCTGGCATTCGTTCCTTTCTTCAATCGATGTGGGACCCTCGCCAAATCCACCCCCCTTTGGGGCCCAGCGTCCTTACTAGCACACCGCCTCGTGTCTACCCCTTTCAGGGAACAGCCTCCTCGTTGGCACCTCTTCCGGTGTCTGGCTCTTAGATCATTTGTAACAGCCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGACTTTCCTTTTCAGGCTTCCCCTCAAGGCTTTAAAATGTGTCTGCTAGGGTGTTTCGTTCTCCTTCCCAACCAATGTGGGATCTCACATTCCAAGAGACATTTCAAGAGTTCTAAGCTTGATACTTTATGACCATAATTAGCCACTATATAAACAAAAAGGTTTAAAATATATTAATGAAACACCATAACTTTATAACTCTAGATTATCATCCACCCAAAATTTGTAACCATCCAAGAAAAGATTAAGCTTGATTCTTCTTTAATGTGGCATTAATTGCCACTTGAGTTTATCTTGTGGTAATTTGAATAACATTTTGTTACATCTTCCTTGAAGTTCATATTGCATGATTGAGATCTTGATTCATATCACTTTTGAATCCTTTTTGATCTGTAATTGGCAGGCTTTGATATGGATCATGTTTTCTGAGCTTATATAACCCATCTTTCTTCAGTAACTTAATTTACCAAATAAAATTTCGTGCACATCAATTATCGAAAACCCGGCTTTGAATGCTCAATAGTCATTTAACAATTCATCAATATCATTTATCTTTCTGAGCTTAAACTTTGTTAAAAACTACATCTTACCCACCTTGACATACACATGACTTATGCTTCGAATTGTGTCTTTGCATGTCTAATACAGAATAGCATTACATCCGTCCCAGTTGGTAACCCTCAAAACTGGCTGCTTTATGCCATCAGACGCTTTGGCCATCAGCCATCTACTACCAATATCTCTCCTGATGAAGAGAAGGTGGAGGATGAAGTCTTAAATCAGATTACTGCCACAAGGGAAAATGCCTCGATGTGTAGCCACGAAACCTTCGACATTTGCATCGATAAGATGTGTAGATCAGACAATCTTACAGCTGCTGCTCAACTACTTAAATCATCATGTGATAGGAAAATATCTCTTAGCTCCTCCAAGGCATATGATATGGTTTTGCTTGCAGCAAGTGAAAGAGGAGACACTACCCTTTTATGTCAAGTATTTAAAGATTCTCTTGTTTCCCGTAAACCGTTGAGTTCGACCTCGTACATGAATTTTGCCAAGGCCTTTGCCAGGACAGATGATAGTAGCAAGCTACTGGAATATGTCAAAGAAATAATCGAGATGACGTTTCCAAACTTCCTGGTCATAAACAGAATAATCTTCGCCTTCTCCGAATGTAGGGAGATTGATAAAGCCCTTCAGATATTTAATCAGATGAAGCTTCTGTCATATAGACCAGATTTGTACACATATAACATCATTTTGGATGCGCTAGGTCGTGCAGGTCGAATGGATGAAATTCTTCATATGTTTGTTTCCATGAAAGAAGATGGCATCGCCCCGGATATTGTGTCGTATAATACATTAATAAATAGCTTAAGGAAGGTGGGTAGACTAGATATGTGCTTGATTTACTTCAGGGAAATGGTTGCAATGAGAATTGAACCTGATTTGCTTACTTATACTGCTTTGATAGAGAGTTTTGGTCGATCTGGAAACGTCGAGGAGGCTTTAACACTCCTCAGGGAGATGAAGCTTAAGCATATCCGACCTTCGAGCTATATCTACAAGTCTCTCATTAGTAATTCAATGAAGATTGGGAAGGTGGAGTTGGCTATGAACCTTCTCAAGGAGATGAAATTAAGTTATTCAAAACTTGCTGGTCCAAAGGATTTCAAACGAAAAAGAAGTTAACCAATTACAAGGCTTTTCATGGTGACTTTCAGGCTGATAAACCTGTGGATGGCTTTAATCTTCAAACTGAGATTTTCCAGAATTACTGCTGTCTGTAGGTAATATTTGTACCCATTTATCTACCTCTTTGATGTCTGACATGAAATACAAAGATTAGTTACAGTGATCAGTTGAATTTTACTATTTCTAGTATGTATGCTTCAGAGGGACAGAGTTCGGGATTCAAATCTATATCCATAAATACCATATCTTGACTCGAGCCAACTCAATAAGGAAAACATGACATAAAGAAAGCTCAGAATCTGTTTTTTTTTATCTGGGTAAAGCTGCTTCTCTCCTTCCCCTCGTAACCTCGGTAGAGCTGCAGAGATTACCTCGTTCCCTTAGGTTTGTTTGCTCTTGAACCTTTGACTCTTTTTCCTGACTTGATTTCACGAGATAAAGCAGTTGAGGATTGCAACGTATTTGACCTGGAATTGAGGGACGAAGACGAAGATGAAGAATTGATTGATAACTTGAAAATTATTTGGGAGGACCGGTTTGTTGGTTTGAGAGAATTGTACAGAGAATGGGTATGAAGAAACAGTTTCCTTGAGTGAACAGAAAATCTTGATTATGTTTGGTTTGCATAATTTGAAGTTTATATGCAACTTATTGAGCAAACTTGTGGGGATGGAAACCTCAGATCCAGGCTTGGTTGAACAAATTTTACTGTTTAAAAGCCCCTCATGGTTCAGATCTTTCACAGTAGACCAGACATTACAGAAGCTAGAAGTTAAGGAACCTGTTGATCTGGCAGCTGATCAATTTGAGGGGCGTATGCCTGATTGCATAAGACCATCGAAATATTCAGCCTAA

mRNA sequence

ATGAGGCGCTGGAACGGAGAAGAAAACTGGCAGATCAGTGGCGTGGGTGGCTTCGGTGAAGAAGCAGGGCTGTGTAGGTCTCGGTTTAGGGGGCTGAATCGTGACGCCGTGAGTCTCAGTGTAGAGGACTGTGACTCGCCGCCGTGTGTCTCAGCTCAGCGGCGGTTTGAGCGTCGTTGTGGGCGTCAGTTCCATTTGCTTGGAAGCTTTAAGATATCGATTACAGGGGCAGCCAGAAATGGTTTGTGTGGGTTAATTGCTTCATTGTATCTCTGTATTAACGACTTGATGCTCTTACACTGTAAGTGGAGACTGCTGTCTGCTAGGAATGTTCTGCATTACTCGTACACTAATAGCATTACATCCGTCCCAGTTGGTAACCCTCAAAACTGGCTGCTTTATGCCATCAGACGCTTTGGCCATCAGCCATCTACTACCAATATCTCTCCTGATGAAGAGAAGGTGGAGGATGAAGTCTTAAATCAGATTACTGCCACAAGGGAAAATGCCTCGATGTGTAGCCACGAAACCTTCGACATTTGCATCGATAAGATGTGTAGATCAGACAATCTTACAGCTGCTGCTCAACTACTTAAATCATCATGTGATAGGAAAATATCTCTTAGCTCCTCCAAGGCATATGATATGGTTTTGCTTGCAGCAAGTGAAAGAGGAGACACTACCCTTTTATGTCAAGTATTTAAAGATTCTCTTGTTTCCCGTAAACCGTTGAGTTCGACCTCGTACATGAATTTTGCCAAGGCCTTTGCCAGGACAGATGATAGTAGCAAGCTACTGGAATATGTCAAAGAAATAATCGAGATGACGTTTCCAAACTTCCTGGTCATAAACAGAATAATCTTCGCCTTCTCCGAATGTAGGGAGATTGATAAAGCCCTTCAGATATTTAATCAGATGAAGCTTCTGTCATATAGACCAGATTTGTACACATATAACATCATTTTGGATGCGCTAGGTCGTGCAGGTCGAATGGATGAAATTCTTCATATGTTTGTTTCCATGAAAGAAGATGGCATCGCCCCGGATATTGTGTCGTATAATACATTAATAAATAGCTTAAGGAAGGTGGGTAGACTAGATATGTGCTTGATTTACTTCAGGGAAATGGTTGCAATGAGAATTGAACCTGATTTGCTTACTTATACTGCTTTGATAGAGAGTTTTGGTCGATCTGGAAACGTCGAGGAGGCTTTAACACTCCTCAGGGAGATGAAGCTTAAGCATATCCGACCTTCGAGCTATATCTACAAGTCTCTCATTAGTAATTCAATGAAGATTGGGAAGGTGGAGTTGGCTATGAACCTTCTCAAGGAGATGAAATTAAGTTATTCAAAACTTGCTGGTCCAAAGGATTTCAAACGAAAAAGAATTGAGGATTGCAACGTATTTGACCTGGAATTGAGGGACGAAGACGAAGATGAAGAATTGATTGATAACTTGAAAATTATTTGGGAGGACCGATCTTTCACAGTAGACCAGACATTACAGAAGCTAGAAGTTAAGGAACCTGTTGATCTGGCAGCTGATCAATTTGAGGGGCGTATGCCTGATTGCATAAGACCATCGAAATATTCAGCCTAA

Coding sequence (CDS)

ATGAGGCGCTGGAACGGAGAAGAAAACTGGCAGATCAGTGGCGTGGGTGGCTTCGGTGAAGAAGCAGGGCTGTGTAGGTCTCGGTTTAGGGGGCTGAATCGTGACGCCGTGAGTCTCAGTGTAGAGGACTGTGACTCGCCGCCGTGTGTCTCAGCTCAGCGGCGGTTTGAGCGTCGTTGTGGGCGTCAGTTCCATTTGCTTGGAAGCTTTAAGATATCGATTACAGGGGCAGCCAGAAATGGTTTGTGTGGGTTAATTGCTTCATTGTATCTCTGTATTAACGACTTGATGCTCTTACACTGTAAGTGGAGACTGCTGTCTGCTAGGAATGTTCTGCATTACTCGTACACTAATAGCATTACATCCGTCCCAGTTGGTAACCCTCAAAACTGGCTGCTTTATGCCATCAGACGCTTTGGCCATCAGCCATCTACTACCAATATCTCTCCTGATGAAGAGAAGGTGGAGGATGAAGTCTTAAATCAGATTACTGCCACAAGGGAAAATGCCTCGATGTGTAGCCACGAAACCTTCGACATTTGCATCGATAAGATGTGTAGATCAGACAATCTTACAGCTGCTGCTCAACTACTTAAATCATCATGTGATAGGAAAATATCTCTTAGCTCCTCCAAGGCATATGATATGGTTTTGCTTGCAGCAAGTGAAAGAGGAGACACTACCCTTTTATGTCAAGTATTTAAAGATTCTCTTGTTTCCCGTAAACCGTTGAGTTCGACCTCGTACATGAATTTTGCCAAGGCCTTTGCCAGGACAGATGATAGTAGCAAGCTACTGGAATATGTCAAAGAAATAATCGAGATGACGTTTCCAAACTTCCTGGTCATAAACAGAATAATCTTCGCCTTCTCCGAATGTAGGGAGATTGATAAAGCCCTTCAGATATTTAATCAGATGAAGCTTCTGTCATATAGACCAGATTTGTACACATATAACATCATTTTGGATGCGCTAGGTCGTGCAGGTCGAATGGATGAAATTCTTCATATGTTTGTTTCCATGAAAGAAGATGGCATCGCCCCGGATATTGTGTCGTATAATACATTAATAAATAGCTTAAGGAAGGTGGGTAGACTAGATATGTGCTTGATTTACTTCAGGGAAATGGTTGCAATGAGAATTGAACCTGATTTGCTTACTTATACTGCTTTGATAGAGAGTTTTGGTCGATCTGGAAACGTCGAGGAGGCTTTAACACTCCTCAGGGAGATGAAGCTTAAGCATATCCGACCTTCGAGCTATATCTACAAGTCTCTCATTAGTAATTCAATGAAGATTGGGAAGGTGGAGTTGGCTATGAACCTTCTCAAGGAGATGAAATTAAGTTATTCAAAACTTGCTGGTCCAAAGGATTTCAAACGAAAAAGAATTGAGGATTGCAACGTATTTGACCTGGAATTGAGGGACGAAGACGAAGATGAAGAATTGATTGATAACTTGAAAATTATTTGGGAGGACCGATCTTTCACAGTAGACCAGACATTACAGAAGCTAGAAGTTAAGGAACCTGTTGATCTGGCAGCTGATCAATTTGAGGGGCGTATGCCTGATTGCATAAGACCATCGAAATATTCAGCCTAA

Protein sequence

MRRWNGEENWQISGVGGFGEEAGLCRSRFRGLNRDAVSLSVEDCDSPPCVSAQRRFERRCGRQFHLLGSFKISITGAARNGLCGLIASLYLCINDLMLLHCKWRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVEDEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDMVLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMTFPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILHMFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFGRSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGPKDFKRKRIEDCNVFDLELRDEDEDEELIDNLKIIWEDRSFTVDQTLQKLEVKEPVDLAADQFEGRMPDCIRPSKYSA

Homology

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BLAST of CmoCh13G002710 vs. ExPASy Swiss-Prot
Match: Q5BIV3 (Pentatricopeptide repeat-containing protein At1g11900 OS=Arabidopsis thaliana OX=3702 GN=At1g11900 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.3e-63
Identity = 144/315 (45.71%), Postives = 206/315 (65.40%), Query Frame = 0


Query: 153 EKVEDEVLNQITATRENAS-MCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSS 212
           E+ E+E+L +I    E+ S + S   +   ++K  R  NL+ A  LL+S  ++ I L  S
Sbjct: 47  EEDEEELLKKIVNHSESGSKIISKIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPIS 106

Query: 213 KAYDMVLLAASERGDTTLLCQVFKDSLV--SRKPLSSTSYMNFAKAFARTDDSSKLLEYV 272
             +  +L AA E  D  L C+VF++ L+   ++PLSS  Y+N A+AF  TDD + L   +
Sbjct: 107 -VFKNLLAAAGELNDMKLSCRVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLL 166

Query: 273 KEIIEMTFP-NFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRA 332
           KEI E + P   +V+NRIIFAF+E R+IDK L I  +MK    +PD+ TYN +LD LGRA
Sbjct: 167 KEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRA 226

Query: 333 GRMDEILHMFVSMKED-GIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLT 392
           G ++EIL +  +MKED  ++ +I++YNT++N +RK  R DMCL+ + EMV   IEPDLL+
Sbjct: 227 GLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLS 286

Query: 393 YTALIESFGRSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMK 452
           YTA+I+S GRSGNV+E+L L  EMK + IRPS Y+Y++LI    K G  + A+ L  E+K
Sbjct: 287 YTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 346

Query: 453 LSYS-KLAGPKDFKR 462
            + S  LAGP+DFKR
Sbjct: 347 NTSSLDLAGPQDFKR 360

[Close]

BLAST of CmoCh13G002710 vs. ExPASy Swiss-Prot
Match: Q9ZU27 (Pentatricopeptide repeat-containing protein At1g51965, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g51965 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.6e-25
Identity = 64/201 (31.84%), Postives = 113/201 (56.22%), Query Frame = 0


Query: 248 SYMNFAKAFARTDDSSKLLEYVKEIIEM-TFPNFLVINRIIFAFSECREIDKALQIFNQM 307
           SYM+  ++      + + +E + +I E     + ++ N +  A  + ++I     +F +M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468

Query: 308 KLLSYRPDLYTYNIILDALGRAGRMDEILHMFVSMKEDGIAPDIVSYNTLINSLRKVGRL 367
           K     PD++TYNI++ + GR G +DE +++F  ++     PDI+SYN+LIN L K G +
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528

Query: 368 DMCLIYFREMVAMRIEPDLLTYTALIESFGRSGNVEEALTLLREMKLKHIRPSSYIYKSL 427
           D   + F+EM    + PD++TY+ L+E FG++  VE A +L  EM +K  +P+   Y  L
Sbjct: 529 DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNIL 588

Query: 428 ISNSMKIGKVELAMNLLKEMK 448
           +    K G+   A++L  +MK
Sbjct: 589 LDCLEKNGRTAEAVDLYSKMK 609

[Close]

BLAST of CmoCh13G002710 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 5.2e-24
Identity = 74/294 (25.17%), Postives = 143/294 (48.64%), Query Frame = 0


Query: 157 DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM 216
           D+ LN            +  T+   I  +C     + A++LL    +RKI+      +  
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PDVFTFSA 332

Query: 217 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFA---RTDDSSKLLEYVKEII 276
           ++ A  + G      +++ + +      S  +Y +    F    R D++ ++ E++  + 
Sbjct: 333 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM--VS 392

Query: 277 EMTFPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDE 336
           +  FP+ +  N +I  F + + +++ +++F +M       +  TYNI++  L +AG  D 
Sbjct: 393 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 452

Query: 337 ILHMFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIE 396
              +F  M  DG+ P+I++YNTL++ L K G+L+  ++ F  +   ++EP + TY  +IE
Sbjct: 453 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 512

Query: 397 SFGRSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMK 448
              ++G VE+   L   + LK ++P    Y ++IS   + G  E A  L KEMK
Sbjct: 513 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563

[Close]

BLAST of CmoCh13G002710 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-23
Identity = 75/294 (25.51%), Postives = 144/294 (48.98%), Query Frame = 0


Query: 157 DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM 216
           ++ LN  T         +  T++  I  +C     + A++LL    +RKI+  +   +  
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSA 331

Query: 217 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFA---RTDDSSKLLEYVKEII 276
           ++ A  + G      +++ + +         +Y +    F    R D++  + E +  I 
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--IS 391

Query: 277 EMTFPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDE 336
           +  FPN +  N +I  F + + +++ +++F +M       +  TYN ++  L +AG  D 
Sbjct: 392 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 451

Query: 337 ILHMFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIE 396
              +F  M  DG+ PDI++Y+ L++ L K G+L+  L+ F  +   ++EPD+ TY  +IE
Sbjct: 452 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 511

Query: 397 SFGRSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMK 448
              ++G VE+   L   + LK ++P+  IY ++IS   + G  E A  L +EMK
Sbjct: 512 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562

[Close]

BLAST of CmoCh13G002710 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.0e-23
Identity = 59/164 (35.98%), Postives = 96/164 (58.54%), Query Frame = 0


Query: 284 NRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILHMFVSMKE 343
           N ++ A  +  ++D A +I  QM +    P++ +Y+ ++D   +AGR DE L++F  M+ 
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437

Query: 344 DGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFGRSGNVEE 403
            GIA D VSYNTL++   KVGR +  L   REM ++ I+ D++TY AL+  +G+ G  +E
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497

Query: 404 ALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMK 448
              +  EMK +H+ P+   Y +LI    K G  + AM + +E K
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK 541

[Close]

BLAST of CmoCh13G002710 vs. ExPASy TrEMBL
Match: A0A6J1HKH0 (pentatricopeptide repeat-containing protein At1g11900-like OS=Cucurbita moschata OX=3662 GN=LOC111464935 PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 1.4e-202
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0


Query: 97  MLLHCKWRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVE 156
           MLLHCKWRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVE
Sbjct: 1   MLLHCKWRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVE 60

Query: 157 DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM 216
           DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM
Sbjct: 61  DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM 120

Query: 217 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT 276
           VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT
Sbjct: 121 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT 180

Query: 277 FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH 336
           FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH
Sbjct: 181 FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH 240

Query: 337 MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG 396
           MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG
Sbjct: 241 MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG 300

Query: 397 RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP 456
           RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP
Sbjct: 301 RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP 360

Query: 457 KDFKRKR 464
           KDFKRKR
Sbjct: 361 KDFKRKR 367

[Close]

BLAST of CmoCh13G002710 vs. ExPASy TrEMBL
Match: A0A6J1HYS7 (pentatricopeptide repeat-containing protein At1g11900 OS=Cucurbita maxima OX=3661 GN=LOC111469320 PE=4 SV=1)

HSP 1 Score: 698.7 bits (1802), Expect = 1.8e-197
Identity = 358/367 (97.55%), Postives = 361/367 (98.37%), Query Frame = 0


Query: 97  MLLHCKWRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVE 156
           MLLHCKW LLSARNVLHYSYTNSITS+PVGNPQNWLLYAIRRFGHQ ST NISPDEEKV+
Sbjct: 1   MLLHCKWSLLSARNVLHYSYTNSITSIPVGNPQNWLLYAIRRFGHQSSTNNISPDEEKVK 60

Query: 157 DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM 216
           DEVLNQITATRENAS CSHETFD+CIDKMCRS NLTAAAQLLKS CDRKISLSSSKAYDM
Sbjct: 61  DEVLNQITATRENASRCSHETFDVCIDKMCRSGNLTAAAQLLKSLCDRKISLSSSKAYDM 120

Query: 217 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT 276
           VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT
Sbjct: 121 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT 180

Query: 277 FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH 336
           FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH
Sbjct: 181 FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH 240

Query: 337 MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG 396
           MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG
Sbjct: 241 MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG 300

Query: 397 RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP 456
           RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP
Sbjct: 301 RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP 360

Query: 457 KDFKRKR 464
           KDFKRKR
Sbjct: 361 KDFKRKR 367

[Close]

BLAST of CmoCh13G002710 vs. ExPASy TrEMBL
Match: A0A6J1D2E8 (pentatricopeptide repeat-containing protein At1g11900-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016680 PE=3 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 1.2e-153
Identity = 291/366 (79.51%), Postives = 318/366 (86.89%), Query Frame = 0


Query: 101 CKWR-LLSARNVLHYSYTNSITSVPVGNPQNWLLYAI--RRFGHQPSTTNISPDEEKVED 160
           C++R L S R VLHY YTN I S PVG+PQ WL +A   +RF HQ   T+ SPDEEKV D
Sbjct: 36  CRFRNLPSTRKVLHYPYTNCIASFPVGDPQIWLFFANMGKRFSHQSYPTDTSPDEEKVID 95

Query: 161 EVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDMV 220
           EVLNQI ATR+NAS  SHETFD CI KMCRS NL AAAQLLKS CD KISLS+SKAYDMV
Sbjct: 96  EVLNQIVATRDNASRSSHETFDACIYKMCRSGNLAAAAQLLKSLCDGKISLSASKAYDMV 155

Query: 221 LLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMTF 280
           LLAASERGDT+L CQVFKD LVS K LSS +YMN AKAF  T+D  KLLEYVKE+IEMTF
Sbjct: 156 LLAASERGDTSLFCQVFKDCLVSCKSLSSATYMNLAKAFISTNDVGKLLEYVKEVIEMTF 215

Query: 281 PNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILHM 340
           PN +VIN+IIFAFS+CREI+KAL+IFNQMKLLS +PDLYTYNIILD LGRAGRMDEILHM
Sbjct: 216 PNLIVINKIIFAFSKCREIEKALRIFNQMKLLSCKPDLYTYNIILDMLGRAGRMDEILHM 275

Query: 341 FVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFGR 400
           FVSMKE GIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTA+IESFGR
Sbjct: 276 FVSMKEAGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTAMIESFGR 335

Query: 401 SGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGPK 460
           SGN+EEAL LLREMKLK++ PS+YIYKSLISNSMKIGKVELAM+LL E+KLS S LA PK
Sbjct: 336 SGNIEEALGLLREMKLKNVYPSNYIYKSLISNSMKIGKVELAMSLLNELKLSGSNLANPK 395

Query: 461 DFKRKR 464
           DFKR++
Sbjct: 396 DFKRRK 401

[Close]

BLAST of CmoCh13G002710 vs. ExPASy TrEMBL
Match: A0A6J1D272 (pentatricopeptide repeat-containing protein At1g11900-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016680 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 2.8e-145
Identity = 275/340 (80.88%), Postives = 300/340 (88.24%), Query Frame = 0


Query: 126 GNPQNWLLYAI--RRFGHQPSTTNISPDEEKVEDEVLNQITATRENASMCSHETFDICID 185
           G+PQ WL +A   +RF HQ   T+ SPDEEKV DEVLNQI ATR+NAS  SHETFD CI 
Sbjct: 20  GDPQIWLFFANMGKRFSHQSYPTDTSPDEEKVIDEVLNQIVATRDNASRSSHETFDACIY 79

Query: 186 KMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDMVLLAASERGDTTLLCQVFKDSLVSRKP 245
           KMCRS NL AAAQLLKS CD KISLS+SKAYDMVLLAASERGDT+L CQVFKD LVS K 
Sbjct: 80  KMCRSGNLAAAAQLLKSLCDGKISLSASKAYDMVLLAASERGDTSLFCQVFKDCLVSCKS 139

Query: 246 LSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMTFPNFLVINRIIFAFSECREIDKALQIF 305
           LSS +YMN AKAF  T+D  KLLEYVKE+IEMTFPN +VIN+IIFAFS+CREI+KAL+IF
Sbjct: 140 LSSATYMNLAKAFISTNDVGKLLEYVKEVIEMTFPNLIVINKIIFAFSKCREIEKALRIF 199

Query: 306 NQMKLLSYRPDLYTYNIILDALGRAGRMDEILHMFVSMKEDGIAPDIVSYNTLINSLRKV 365
           NQMKLLS +PDLYTYNIILD LGRAGRMDEILHMFVSMKE GIAPDIVSYNTLINSLRKV
Sbjct: 200 NQMKLLSCKPDLYTYNIILDMLGRAGRMDEILHMFVSMKEAGIAPDIVSYNTLINSLRKV 259

Query: 366 GRLDMCLIYFREMVAMRIEPDLLTYTALIESFGRSGNVEEALTLLREMKLKHIRPSSYIY 425
           GRLDMCLIYFREMVAMRIEPDLLTYTA+IESFGRSGN+EEAL LLREMKLK++ PS+YIY
Sbjct: 260 GRLDMCLIYFREMVAMRIEPDLLTYTAMIESFGRSGNIEEALGLLREMKLKNVYPSNYIY 319

Query: 426 KSLISNSMKIGKVELAMNLLKEMKLSYSKLAGPKDFKRKR 464
           KSLISNSMKIGKVELAM+LL E+KLS S LA PKDFKR++
Sbjct: 320 KSLISNSMKIGKVELAMSLLNELKLSGSNLANPKDFKRRK 359

[Close]

BLAST of CmoCh13G002710 vs. ExPASy TrEMBL
Match: A0A1S3CIJ8 (pentatricopeptide repeat-containing protein At1g11900 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500823 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 1.4e-144
Identity = 275/361 (76.18%), Postives = 309/361 (85.60%), Query Frame = 0


Query: 103 WRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVEDEVLNQ 162
           ++L   RN+LHYSY N I S+PVGN Q W LYAI+ F HQ S+TNISPDE KV DEVLNQ
Sbjct: 4   YQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQ 63

Query: 163 ITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDMVLLAAS 222
           I A RENAS CSHE  D CIDK+C   +L AAAQLLKS C+ KISL+SSKAYDMVLLAAS
Sbjct: 64  IIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMVLLAAS 123

Query: 223 ERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMTFPNFLV 282
           ERGDT LLCQVFK ++VS K LSS SYM+FA+AF +T+DSSKLLE VKEI+E+T  N  V
Sbjct: 124 ERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSV 183

Query: 283 INRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILHMFVSMK 342
           INRIIFAFS+CREIDKA QIFNQMK LS  PDLYTYNI+LD LGRAGR++EILH+FVSMK
Sbjct: 184 INRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMK 243

Query: 343 EDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFGRSGNVE 402
           ++GIAPDIVSYNTLINSLRKVGRLD+ LIYFREMVAM I+PDLLTYTALIESFGR GN+E
Sbjct: 244 DEGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIKPDLLTYTALIESFGRFGNIE 303

Query: 403 EALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGPKDFKRK 462
           EALTLL+EMKLK I PSSYIYKSLI+NS K+GKVELA NLL EMKLS SKLA P+DFKR+
Sbjct: 304 EALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRR 363

Query: 463 R 464
           +
Sbjct: 364 K 364

[Close]

BLAST of CmoCh13G002710 vs. NCBI nr
Match: XP_022964991.1 (pentatricopeptide repeat-containing protein At1g11900-like [Cucurbita moschata])

HSP 1 Score: 715.7 bits (1846), Expect = 3.0e-202
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0


Query: 97  MLLHCKWRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVE 156
           MLLHCKWRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVE
Sbjct: 1   MLLHCKWRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVE 60

Query: 157 DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM 216
           DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM
Sbjct: 61  DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM 120

Query: 217 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT 276
           VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT
Sbjct: 121 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT 180

Query: 277 FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH 336
           FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH
Sbjct: 181 FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH 240

Query: 337 MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG 396
           MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG
Sbjct: 241 MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG 300

Query: 397 RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP 456
           RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP
Sbjct: 301 RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP 360

Query: 457 KDFKRKR 464
           KDFKRKR
Sbjct: 361 KDFKRKR 367

[Close]

BLAST of CmoCh13G002710 vs. NCBI nr
Match: KAG6583593.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 709.9 bits (1831), Expect = 1.6e-200
Identity = 364/367 (99.18%), Postives = 366/367 (99.73%), Query Frame = 0


Query: 97  MLLHCKWRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVE 156
           MLLHCKWRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKV+
Sbjct: 1   MLLHCKWRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVK 60

Query: 157 DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM 216
           DEVLNQITATRENASMCSHETFDICIDKMCRS+NLTAAAQLLKS CDRKISLSSSKAYDM
Sbjct: 61  DEVLNQITATRENASMCSHETFDICIDKMCRSNNLTAAAQLLKSLCDRKISLSSSKAYDM 120

Query: 217 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT 276
           VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT
Sbjct: 121 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT 180

Query: 277 FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH 336
           FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH
Sbjct: 181 FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH 240

Query: 337 MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG 396
           MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG
Sbjct: 241 MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG 300

Query: 397 RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP 456
           RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP
Sbjct: 301 RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP 360

Query: 457 KDFKRKR 464
           KDFKRKR
Sbjct: 361 KDFKRKR 367

[Close]

BLAST of CmoCh13G002710 vs. NCBI nr
Match: XP_023518970.1 (pentatricopeptide repeat-containing protein At1g11900 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 704.5 bits (1817), Expect = 6.9e-199
Identity = 360/367 (98.09%), Postives = 363/367 (98.91%), Query Frame = 0


Query: 97  MLLHCKWRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVE 156
           MLLHCKW LLSARNVLHYSYTNSITS+PVGNPQNWLLYAIRRFGHQPSTTNISPDEEKV+
Sbjct: 1   MLLHCKWSLLSARNVLHYSYTNSITSIPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVK 60

Query: 157 DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM 216
           DEVLNQ T TRENASMCSHETFD+CIDKMCRSDNLTAAAQLLKS CDRKISLSSSKAYDM
Sbjct: 61  DEVLNQNTVTRENASMCSHETFDVCIDKMCRSDNLTAAAQLLKSLCDRKISLSSSKAYDM 120

Query: 217 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT 276
           VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT
Sbjct: 121 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT 180

Query: 277 FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH 336
           FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH
Sbjct: 181 FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH 240

Query: 337 MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG 396
           MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG
Sbjct: 241 MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG 300

Query: 397 RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP 456
           RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP
Sbjct: 301 RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP 360

Query: 457 KDFKRKR 464
           KDFKRKR
Sbjct: 361 KDFKRKR 367

[Close]

BLAST of CmoCh13G002710 vs. NCBI nr
Match: XP_022970322.1 (pentatricopeptide repeat-containing protein At1g11900 [Cucurbita maxima])

HSP 1 Score: 698.7 bits (1802), Expect = 3.8e-197
Identity = 358/367 (97.55%), Postives = 361/367 (98.37%), Query Frame = 0


Query: 97  MLLHCKWRLLSARNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVE 156
           MLLHCKW LLSARNVLHYSYTNSITS+PVGNPQNWLLYAIRRFGHQ ST NISPDEEKV+
Sbjct: 1   MLLHCKWSLLSARNVLHYSYTNSITSIPVGNPQNWLLYAIRRFGHQSSTNNISPDEEKVK 60

Query: 157 DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM 216
           DEVLNQITATRENAS CSHETFD+CIDKMCRS NLTAAAQLLKS CDRKISLSSSKAYDM
Sbjct: 61  DEVLNQITATRENASRCSHETFDVCIDKMCRSGNLTAAAQLLKSLCDRKISLSSSKAYDM 120

Query: 217 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT 276
           VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT
Sbjct: 121 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMT 180

Query: 277 FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH 336
           FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH
Sbjct: 181 FPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILH 240

Query: 337 MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG 396
           MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG
Sbjct: 241 MFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFG 300

Query: 397 RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP 456
           RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP
Sbjct: 301 RSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGP 360

Query: 457 KDFKRKR 464
           KDFKRKR
Sbjct: 361 KDFKRKR 367

[Close]

BLAST of CmoCh13G002710 vs. NCBI nr
Match: XP_038893594.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g11900 [Benincasa hispida])

HSP 1 Score: 570.5 bits (1469), Expect = 1.6e-158
Identity = 299/355 (84.23%), Postives = 317/355 (89.30%), Query Frame = 0


Query: 109 RNVLHYSYTNSITSVPVGNPQNWLLYAIRRFGHQPSTTNISPDEEKVEDEVLNQITATRE 168
           RN+LH SY NSI SVPVGN Q W LYAIR   HQ S+TNI PDE KV DEVLNQI A RE
Sbjct: 10  RNLLHCSYANSIASVPVGNSQFWPLYAIRLLSHQSSSTNICPDEVKVGDEVLNQIIAPRE 69

Query: 169 NASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDMVLLAASERGDTT 228
           NAS CSHETFD CIDKMCR  +L AAAQLLKS CD KI LSSSKAYDMVLLAASE GDTT
Sbjct: 70  NASRCSHETFDACIDKMCRIGHLAAAAQLLKSLCDGKIPLSSSKAYDMVLLAASESGDTT 129

Query: 229 LLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMTFPNFLVINRIIF 288
           LL QVFKDSLVS K LSSTSY +FA AF RT+DS+KLLEYVKEIIEMTFPN +VINRIIF
Sbjct: 130 LLFQVFKDSLVSCKSLSSTSYKSFANAFTRTNDSNKLLEYVKEIIEMTFPNCIVINRIIF 189

Query: 289 AFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILHMFVSMKEDGIAP 348
           AFS+CREIDKALQIFNQMKLLS RPDLYTYNIILD LGRAGR+DEILH+FVSMKEDGIAP
Sbjct: 190 AFSKCREIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRAGRVDEILHLFVSMKEDGIAP 249

Query: 349 DIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFGRSGNVEEALTLL 408
           DIVSYNTLINS RKVGRLDMCL+YF+EMVA+RIEPDLLTYTALIESFGRSGN+EEA TLL
Sbjct: 250 DIVSYNTLINSFRKVGRLDMCLVYFKEMVAVRIEPDLLTYTALIESFGRSGNIEEAWTLL 309

Query: 409 REMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGPKDFKRKR 464
           REMKLK+I PSSYIYKSLI NSMK+GKVELAMNLLKEMKLS SKLAGPKDFKR++
Sbjct: 310 REMKLKNICPSSYIYKSLIGNSMKMGKVELAMNLLKEMKLSDSKLAGPKDFKRRK 364

[Close]

BLAST of CmoCh13G002710 vs. TAIR 10
Match: AT1G11900.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 244.2 bits (622), Expect = 2.4e-64
Identity = 144/315 (45.71%), Postives = 206/315 (65.40%), Query Frame = 0


Query: 153 EKVEDEVLNQITATRENAS-MCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSS 212
           E+ E+E+L +I    E+ S + S   +   ++K  R  NL+ A  LL+S  ++ I L  S
Sbjct: 47  EEDEEELLKKIVNHSESGSKIISKIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPIS 106

Query: 213 KAYDMVLLAASERGDTTLLCQVFKDSLV--SRKPLSSTSYMNFAKAFARTDDSSKLLEYV 272
             +  +L AA E  D  L C+VF++ L+   ++PLSS  Y+N A+AF  TDD + L   +
Sbjct: 107 -VFKNLLAAAGELNDMKLSCRVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLL 166

Query: 273 KEIIEMTFP-NFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRA 332
           KEI E + P   +V+NRIIFAF+E R+IDK L I  +MK    +PD+ TYN +LD LGRA
Sbjct: 167 KEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRA 226

Query: 333 GRMDEILHMFVSMKED-GIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLT 392
           G ++EIL +  +MKED  ++ +I++YNT++N +RK  R DMCL+ + EMV   IEPDLL+
Sbjct: 227 GLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLS 286

Query: 393 YTALIESFGRSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMK 452
           YTA+I+S GRSGNV+E+L L  EMK + IRPS Y+Y++LI    K G  + A+ L  E+K
Sbjct: 287 YTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 346

Query: 453 LSYS-KLAGPKDFKR 462
            + S  LAGP+DFKR
Sbjct: 347 NTSSLDLAGPQDFKR 360

[Close]

BLAST of CmoCh13G002710 vs. TAIR 10
Match: AT1G51965.1 (ABA Overly-Sensitive 5 )

HSP 1 Score: 117.9 bits (294), Expect = 2.6e-26
Identity = 64/201 (31.84%), Postives = 113/201 (56.22%), Query Frame = 0


Query: 248 SYMNFAKAFARTDDSSKLLEYVKEIIEM-TFPNFLVINRIIFAFSECREIDKALQIFNQM 307
           SYM+  ++      + + +E + +I E     + ++ N +  A  + ++I     +F +M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468

Query: 308 KLLSYRPDLYTYNIILDALGRAGRMDEILHMFVSMKEDGIAPDIVSYNTLINSLRKVGRL 367
           K     PD++TYNI++ + GR G +DE +++F  ++     PDI+SYN+LIN L K G +
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528

Query: 368 DMCLIYFREMVAMRIEPDLLTYTALIESFGRSGNVEEALTLLREMKLKHIRPSSYIYKSL 427
           D   + F+EM    + PD++TY+ L+E FG++  VE A +L  EM +K  +P+   Y  L
Sbjct: 529 DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNIL 588

Query: 428 ISNSMKIGKVELAMNLLKEMK 448
           +    K G+   A++L  +MK
Sbjct: 589 LDCLEKNGRTAEAVDLYSKMK 609

[Close]

BLAST of CmoCh13G002710 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 114.0 bits (284), Expect = 3.7e-25
Identity = 74/294 (25.17%), Postives = 143/294 (48.64%), Query Frame = 0


Query: 157 DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM 216
           D+ LN            +  T+   I  +C     + A++LL    +RKI+      +  
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PDVFTFSA 332

Query: 217 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFA---RTDDSSKLLEYVKEII 276
           ++ A  + G      +++ + +      S  +Y +    F    R D++ ++ E++  + 
Sbjct: 333 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM--VS 392

Query: 277 EMTFPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDE 336
           +  FP+ +  N +I  F + + +++ +++F +M       +  TYNI++  L +AG  D 
Sbjct: 393 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 452

Query: 337 ILHMFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIE 396
              +F  M  DG+ P+I++YNTL++ L K G+L+  ++ F  +   ++EP + TY  +IE
Sbjct: 453 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 512

Query: 397 SFGRSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMK 448
              ++G VE+   L   + LK ++P    Y ++IS   + G  E A  L KEMK
Sbjct: 513 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563

[Close]

BLAST of CmoCh13G002710 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 8.3e-25
Identity = 75/294 (25.51%), Postives = 144/294 (48.98%), Query Frame = 0


Query: 157 DEVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDM 216
           ++ LN  T         +  T++  I  +C     + A++LL    +RKI+  +   +  
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSA 331

Query: 217 VLLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFA---RTDDSSKLLEYVKEII 276
           ++ A  + G      +++ + +         +Y +    F    R D++  + E +  I 
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--IS 391

Query: 277 EMTFPNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDE 336
           +  FPN +  N +I  F + + +++ +++F +M       +  TYN ++  L +AG  D 
Sbjct: 392 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 451

Query: 337 ILHMFVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIE 396
              +F  M  DG+ PDI++Y+ L++ L K G+L+  L+ F  +   ++EPD+ TY  +IE
Sbjct: 452 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 511

Query: 397 SFGRSGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMK 448
              ++G VE+   L   + LK ++P+  IY ++IS   + G  E A  L +EMK
Sbjct: 512 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562

[Close]

BLAST of CmoCh13G002710 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 112.1 bits (279), Expect = 1.4e-24
Identity = 59/164 (35.98%), Postives = 96/164 (58.54%), Query Frame = 0


Query: 284 NRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILHMFVSMKE 343
           N ++ A  +  ++D A +I  QM +    P++ +Y+ ++D   +AGR DE L++F  M+ 
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437

Query: 344 DGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFGRSGNVEE 403
            GIA D VSYNTL++   KVGR +  L   REM ++ I+ D++TY AL+  +G+ G  +E
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497

Query: 404 ALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMK 448
              +  EMK +H+ P+   Y +LI    K G  + AM + +E K
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK 541

The following BLAST results are available for this feature:

BLAST of CmoCh13G002710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5BIV3	3.3e-63	45.71	Pentatricopeptide repeat-containing protein At1g11900 OS=Arabidopsis thaliana OX...	[more]
Q9ZU27	3.6e-25	31.84	Pentatricopeptide repeat-containing protein At1g51965, mitochondrial OS=Arabidop...	[more]
Q9SXD1	5.2e-24	25.17	Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop...	[more]
Q9LQ14	1.2e-23	25.51	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]
Q9SIC9	2.0e-23	35.98	Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop...	[more]

BLAST of CmoCh13G002710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKH0	1.4e-202	100.00	pentatricopeptide repeat-containing protein At1g11900-like OS=Cucurbita moschata...	[more]
A0A6J1HYS7	1.8e-197	97.55	pentatricopeptide repeat-containing protein At1g11900 OS=Cucurbita maxima OX=366...	[more]
A0A6J1D2E8	1.2e-153	79.51	pentatricopeptide repeat-containing protein At1g11900-like isoform X1 OS=Momordi...	[more]
A0A6J1D272	2.8e-145	80.88	pentatricopeptide repeat-containing protein At1g11900-like isoform X2 OS=Momordi...	[more]
A0A1S3CIJ8	1.4e-144	76.18	pentatricopeptide repeat-containing protein At1g11900 isoform X1 OS=Cucumis melo...	[more]

BLAST of CmoCh13G002710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964991.1	3.0e-202	100.00	pentatricopeptide repeat-containing protein At1g11900-like [Cucurbita moschata]	[more]
KAG6583593.1	1.6e-200	99.18	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023518970.1	6.9e-199	98.09	pentatricopeptide repeat-containing protein At1g11900 [Cucurbita pepo subsp. pep...	[more]
XP_022970322.1	3.8e-197	97.55	pentatricopeptide repeat-containing protein At1g11900 [Cucurbita maxima]	[more]
XP_038893594.1	1.6e-158	84.23	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g11900 [Beni...	[more]

BLAST of CmoCh13G002710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11900.1	2.4e-64	45.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G51965.1	2.6e-26	31.84	ABA Overly-Sensitive 5	[more]
AT1G62670.1	3.7e-25	25.17	rna processing factor 2	[more]
AT1G62930.1	8.3e-25	25.51	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G31400.1	1.4e-24	35.98	genomes uncoupled 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 284..314 e-value: 0.0024 score: 15.9 coord: 316..350 e-value: 5.6E-10 score: 36.8 coord: 387..419 e-value: 3.0E-8 score: 31.4 coord: 351..384 e-value: 1.7E-6 score: 25.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 313..360 e-value: 2.7E-12 score: 46.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 373..428 e-value: 1.5E-9 score: 37.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 284..307 e-value: 0.18 score: 12.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 279..313 score: 8.845827
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 384..418 score: 12.495939
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 314..348 score: 13.033043
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 349..383 score: 11.224429
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 365..455 e-value: 2.4E-19 score: 71.4 coord: 230..364 e-value: 2.6E-27 score: 97.3
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 109..463
None	No IPR available	PANTHER	PTHR47942:SF17	OS05G0481800 PROTEIN	coord: 109..463

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G002710.1	CmoCh13G002710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding