
CmoCh12G004890 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCATTAAGATCCCGATTGCGGATGTCGAGAGAGGAGATGAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTCCTTAGCATCAGTGAGCTCACCCACGCCTTCGGCTTCTTAGGCAATATTCTTCCATACTACAAAGCTCACTATGGTCTCGCTTATGCTGACTATGATTGTAATGGCTTTATCACTGAAGATGAGCTTGATAGGCTTGTTGATTATGCCATGAGGTTTCACTCCCCCAAGTGTTGTAACCATGGTAGATCCATCGTGTAA ATGGCGCCATTAAGATCCCGATTGCGGATGTCGAGAGAGGAGATGAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTCCTTAGCATCAGTGAGCTCACCCACGCCTTCGGCTTCTTAGGCAATATTCTTCCATACTACAAAGCTCACTATGGTCTCGCTTATGCTGACTATGATTGTAATGGCTTTATCACTGAAGATGAGCTTGATAGGCTTGTTGATTATGCCATGAGGTTTCACTCCCCCAAGTGTTGTAACCATGGTAGATCCATCGTGTAA ATGGCGCCATTAAGATCCCGATTGCGGATGTCGAGAGAGGAGATGAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTCCTTAGCATCAGTGAGCTCACCCACGCCTTCGGCTTCTTAGGCAATATTCTTCCATACTACAAAGCTCACTATGGTCTCGCTTATGCTGACTATGATTGTAATGGCTTTATCACTGAAGATGAGCTTGATAGGCTTGTTGATTATGCCATGAGGTTTCACTCCCCCAAGTGTTGTAACCATGGTAGATCCATCGTGTAA MAPLRSRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRFHSPKCCNHGRSIV Homology
BLAST of CmoCh12G004890 vs. ExPASy Swiss-Prot
Match: Q9C9U8 (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 3.1e-04 Identity = 21/57 (36.84%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of CmoCh12G004890 vs. ExPASy Swiss-Prot
Match: Q8L3R2 (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2) HSP 1 Score: 45.1 bits (105), Expect = 5.2e-04 Identity = 20/54 (37.04%), Postives = 31/54 (57.41%), Query Frame = 0
BLAST of CmoCh12G004890 vs. ExPASy Swiss-Prot
Match: P05933 (Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cam1 PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 6.9e-04 Identity = 22/65 (33.85%), Postives = 36/65 (55.38%), Query Frame = 0
BLAST of CmoCh12G004890 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 8.1e-24 Identity = 55/87 (63.22%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of CmoCh12G004890 vs. ExPASy TrEMBL
Match: A0A0A0LRC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 5.2e-23 Identity = 54/87 (62.07%), Postives = 72/87 (82.76%), Query Frame = 0
BLAST of CmoCh12G004890 vs. ExPASy TrEMBL
Match: A0A0A0LKX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22 Identity = 53/76 (69.74%), Postives = 63/76 (82.89%), Query Frame = 0
BLAST of CmoCh12G004890 vs. ExPASy TrEMBL
Match: A0A5A7V2Z9 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00190 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.3e-21 Identity = 51/75 (68.00%), Postives = 62/75 (82.67%), Query Frame = 0
BLAST of CmoCh12G004890 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.9e-21 Identity = 50/78 (64.10%), Postives = 64/78 (82.05%), Query Frame = 0
BLAST of CmoCh12G004890 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family ) HSP 1 Score: 45.8 bits (107), Expect = 2.2e-05 Identity = 21/57 (36.84%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of CmoCh12G004890 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 ) HSP 1 Score: 45.1 bits (105), Expect = 3.7e-05 Identity = 20/54 (37.04%), Postives = 31/54 (57.41%), Query Frame = 0
BLAST of CmoCh12G004890 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 ) HSP 1 Score: 40.4 bits (93), Expect = 9.2e-04 Identity = 22/65 (33.85%), Postives = 35/65 (53.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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