CmoCh10G008110 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATCATGTTGGCCAAAGGGCAACGTCCGATCATCGGAAGGTTATCGGAGCTTCTCGTCTCCCGTTGCCGGCCAGCCTTCCTCGACACCACCACCACCGCCTCCTCCGCCAGCCCCACTTCCCATTTCGACCTCTCCCCTTCTCCCAGAGGCAATCTAAAAAATTACAACGCCGCCGTCGGACTTGGCATCGTCGCCGCCCTCGATACCTCCACCTCCGCCGTCCGTGGATGTGATATTTTGGTTAAACACGCCGTCTTCAGCCCGAAATTTAACTCCGCTCGCTGCCCTGCTCCGATCCCGATCGCGTTGGCTGGTGGGTCGTTTCAGCCGGAGGAAGACGACGAACTCGACGGCGTGGAAGAGAATTACACTTATGTTACCACGCGTGGACCTCACGAATCTTCCACACGTGTCTATTACGACGGTGGTCTGGTCGCTAGTAGGTGTTGTGAGAAATCGCCTCCGATTATGGCTCCCGCCGATGAAACTCCGCCGCGCCGGACGGCGGATTTCCTCCGATCGTGTCATTTGTGTGGGAAAAATTTAGAGGGGAAAGATATTTACATATACAAGTAAAGAAACAATACCCAAAACTTTATTTGGTTCAGAATTTAATTTATTCCGATCAAAATTTCTGATGGGTTGTGAAAATTTTGCAGAGGGGAATTGGCGTTTTGTAGCCCGGAGTGCCGGTCGAGCCAAATAACGAAGGAGGAGACGAAGGAGCGGTGTCGGTCGGAGACGAGAACGGCTGTGGAGATGGCGTCGAACTCGCCGTATAACAGAGGGATTTTCTCGACTGGGATTCTTGCAATTTAGGTGAAGAATTAGAAGAAGAGGAAGAAAGTATATACAAAATTTAGATACGGCTAATAGTTTGGTTTTTGAGTATTGTATACATGAAGAACAAGTGGAGTGACAATTATTTACCCACTTCTTGTTTTATGAGCAATAAAATAGAGAAAGGCAATTTTTTTATTGGTGAATTCCCAGAAGGTTATATGGAATGTTTTTGTTCACTCCCCCGTCTAACCAATGTGTGCCAGCATTCTCGCGAACACATCGTCGGATGATTTAACCATAATAGGGGCCGGTGTCCTTGCTGGCACACCGCCCCGTGTGCGCTCTGATACTATTTGTAACAGCCTAAGTCTACGATTAGCAAATATTGTTAACGC CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATCATGTTGGCCAAAGGGCAACGTCCGATCATCGGAAGGTTATCGGAGCTTCTCGTCTCCCGTTGCCGGCCAGCCTTCCTCGACACCACCACCACCGCCTCCTCCGCCAGCCCCACTTCCCATTTCGACCTCTCCCCTTCTCCCAGAGGCAATCTAAAAAATTACAACGCCGCCGTCGGACTTGGCATCGTCGCCGCCCTCGATACCTCCACCTCCGCCGTCCGTGGATGTGATATTTTGGTTAAACACGCCGTCTTCAGCCCGAAATTTAACTCCGCTCGCTGCCCTGCTCCGATCCCGATCGCGTTGGCTGGTGGGTCGTTTCAGCCGGAGGAAGACGACGAACTCGACGGCGTGGAAGAGAATTACACTTATGTTACCACGCGTGGACCTCACGAATCTTCCACACGTGTCTATTACGACGGTGGTCTGGTCGCTAGTAGGTGTTGTGAGAAATCGCCTCCGATTATGGCTCCCGCCGATGAAACTCCGCCGCGCCGGACGGCGGATTTCCTCCGATCGTGTCATTTGTGTGGGAAAAATTTAGAGGGGAAAGATATTTACATATACAAAGGGGAATTGGCGTTTTGTAGCCCGGAGTGCCGGTCGAGCCAAATAACGAAGGAGGAGACGAAGGAGCGGTGTCGGTCGGAGACGAGAACGGCTGTGGAGATGGCGTCGAACTCGCCGTATAACAGAGGGATTTTCTCGACTGGGATTCTTGCAATTTAGGTGAAGAATTAGAAGAAGAGGAAGAAAGTATATACAAAATTTAGATACGGCTAATAGTTTGGTTTTTGAGTATTGTATACATGAAGAACAAGTGGAGTGACAATTATTTACCCACTTCTTGTTTTATGAGCAATAAAATAGAGAAAGGCAATTTTTTTATTGGTGAATTCCCAGAAGGTTATATGGAATGTTTTTGTTCACTCCCCCGTCTAACCAATGTGTGCCAGCATTCTCGCGAACACATCGTCGGATGATTTAACCATAATAGGGGCCGGTGTCCTTGCTGGCACACCGCCCCGTGTGCGCTCTGATACTATTTGTAACAGCCTAAGTCTACGATTAGCAAATATTGTTAACGC ATGTTGGCCAAAGGGCAACGTCCGATCATCGGAAGGTTATCGGAGCTTCTCGTCTCCCGTTGCCGGCCAGCCTTCCTCGACACCACCACCACCGCCTCCTCCGCCAGCCCCACTTCCCATTTCGACCTCTCCCCTTCTCCCAGAGGCAATCTAAAAAATTACAACGCCGCCGTCGGACTTGGCATCGTCGCCGCCCTCGATACCTCCACCTCCGCCGTCCGTGGATGTGATATTTTGGTTAAACACGCCGTCTTCAGCCCGAAATTTAACTCCGCTCGCTGCCCTGCTCCGATCCCGATCGCGTTGGCTGGTGGGTCGTTTCAGCCGGAGGAAGACGACGAACTCGACGGCGTGGAAGAGAATTACACTTATGTTACCACGCGTGGACCTCACGAATCTTCCACACGTGTCTATTACGACGGTGGTCTGGTCGCTAGTAGGTGTTGTGAGAAATCGCCTCCGATTATGGCTCCCGCCGATGAAACTCCGCCGCGCCGGACGGCGGATTTCCTCCGATCGTGTCATTTGTGTGGGAAAAATTTAGAGGGGAAAGATATTTACATATACAAAGGGGAATTGGCGTTTTGTAGCCCGGAGTGCCGGTCGAGCCAAATAACGAAGGAGGAGACGAAGGAGCGGTGTCGGTCGGAGACGAGAACGGCTGTGGAGATGGCGTCGAACTCGCCGTATAACAGAGGGATTTTCTCGACTGGGATTCTTGCAATTTAG MLAKGQRPIIGRLSELLVSRCRPAFLDTTTTASSASPTSHFDLSPSPRGNLKNYNAAVGLGIVAALDTSTSAVRGCDILVKHAVFSPKFNSARCPAPIPIALAGGSFQPEEDDELDGVEENYTYVTTRGPHESSTRVYYDGGLVASRCCEKSPPIMAPADETPPRRTADFLRSCHLCGKNLEGKDIYIYKGELAFCSPECRSSQITKEETKERCRSETRTAVEMASNSPYNRGIFSTGILAI Homology
BLAST of CmoCh10G008110 vs. ExPASy Swiss-Prot
Match: Q8GRN0 (FCS-Like Zinc finger 13 OS=Arabidopsis thaliana OX=3702 GN=FLZ13 PE=1 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.4e-24 Identity = 90/243 (37.04%), Postives = 127/243 (52.26%), Query Frame = 0
BLAST of CmoCh10G008110 vs. ExPASy Swiss-Prot
Match: Q8GYX2 (FCS-Like Zinc finger 14 OS=Arabidopsis thaliana OX=3702 GN=FLZ14 PE=1 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.4e-24 Identity = 100/262 (38.17%), Postives = 130/262 (49.62%), Query Frame = 0
BLAST of CmoCh10G008110 vs. ExPASy Swiss-Prot
Match: F4IE21 (FCS-Like Zinc finger 12 OS=Arabidopsis thaliana OX=3702 GN=FLZ12 PE=1 SV=2) HSP 1 Score: 81.6 bits (200), Expect = 1.3e-14 Identity = 80/236 (33.90%), Postives = 110/236 (46.61%), Query Frame = 0
BLAST of CmoCh10G008110 vs. ExPASy Swiss-Prot
Match: Q9LYE4 (FCS-Like Zinc finger 10 OS=Arabidopsis thaliana OX=3702 GN=FLZ10 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.3e-11 Identity = 55/172 (31.98%), Postives = 80/172 (46.51%), Query Frame = 0
BLAST of CmoCh10G008110 vs. ExPASy Swiss-Prot
Match: Q8LGS1 (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=1 SV=2) HSP 1 Score: 67.4 bits (163), Expect = 2.5e-10 Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 0
BLAST of CmoCh10G008110 vs. ExPASy TrEMBL
Match: A0A6J1H9U9 (uncharacterized protein LOC111461446 OS=Cucurbita moschata OX=3662 GN=LOC111461446 PE=3 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 5.9e-135 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of CmoCh10G008110 vs. ExPASy TrEMBL
Match: A0A6J1JJ16 (uncharacterized protein LOC111485554 OS=Cucurbita maxima OX=3661 GN=LOC111485554 PE=3 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 1.7e-126 Identity = 230/244 (94.26%), Postives = 233/244 (95.49%), Query Frame = 0
BLAST of CmoCh10G008110 vs. ExPASy TrEMBL
Match: A0A6J1EVR0 (uncharacterized protein LOC111438247 OS=Cucurbita moschata OX=3662 GN=LOC111438247 PE=3 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 4.7e-100 Identity = 189/243 (77.78%), Postives = 201/243 (82.72%), Query Frame = 0
BLAST of CmoCh10G008110 vs. ExPASy TrEMBL
Match: A0A6J1HX52 (uncharacterized protein LOC111467458 OS=Cucurbita maxima OX=3661 GN=LOC111467458 PE=3 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 5.7e-98 Identity = 186/243 (76.54%), Postives = 199/243 (81.89%), Query Frame = 0
BLAST of CmoCh10G008110 vs. ExPASy TrEMBL
Match: A0A5D3CHY1 (DUF581 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001370 PE=3 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 7.0e-96 Identity = 188/246 (76.42%), Postives = 204/246 (82.93%), Query Frame = 0
BLAST of CmoCh10G008110 vs. TAIR 10
Match: AT1G74940.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 114.8 bits (286), Expect = 9.9e-26 Identity = 90/243 (37.04%), Postives = 127/243 (52.26%), Query Frame = 0
BLAST of CmoCh10G008110 vs. TAIR 10
Match: AT5G20700.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 114.8 bits (286), Expect = 9.9e-26 Identity = 100/262 (38.17%), Postives = 130/262 (49.62%), Query Frame = 0
BLAST of CmoCh10G008110 vs. TAIR 10
Match: AT1G19200.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 80.1 bits (196), Expect = 2.7e-15 Identity = 76/212 (35.85%), Postives = 104/212 (49.06%), Query Frame = 0
BLAST of CmoCh10G008110 vs. TAIR 10
Match: AT5G11460.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 70.9 bits (172), Expect = 1.6e-12 Identity = 55/172 (31.98%), Postives = 80/172 (46.51%), Query Frame = 0
BLAST of CmoCh10G008110 vs. TAIR 10
Match: AT3G63210.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 67.4 bits (163), Expect = 1.8e-11 Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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