CmoCh10G002710 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G002710
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Transcription initiation factor IIE subunit alpha
Location	Cmo_Chr10: 1212294 .. 1216484 (+)
RNA-Seq Expression	CmoCh10G002710
Synteny	CmoCh10G002710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCATTTTTTCTGTTCCTTTTCTCCCACGATTCTCAGATCGCTCTCTGCGAAGTCCTGCTCGAGTCGAATACTGAAAAAAATCAGCTCACATGTAATAGCTACACCAGCACTTGAGCAATTGAATCCCAAGTTAATTCATCATCATCATGAGTATCGAACCTTTTAACAGGTACTTTCCTCTATTAACTTATGAGCCCTCTCCACTGATAAAAATGGCAATTTGAATATCTTCTCTAGCTGTGAACAATGGGATTGTTTTATTTTTTCATTAGCTTCCTGGGTTTTGTTTAATTTGGTGTGTTGAATGATCTTGATTAATTGGGCAGGTTGGTGAAGCTAGCTGCAAGAGCTTTCTACGATGACATTACGACTAAAGGAGATAATCAGCCCAAGACCGGTCGGAGTGATAATAGGGGAATCGCGGTTGTCGTGCTTGATGCTCTCACGAGGTACTGCACTTTGGCGTTTTTATTTACTTGGCAATCTTCAGTGTTTTTACAAGGCAGAATTCTGCCGCTCAATTTTTCGTTATGAAGCTGGGGAGGCAGAGCTACATTAGTGGAACGAATTCTAGGCAGGAACTGTGCTTGAATAAGATTAGAATAGTGGAAATTTGAGCGTAATGCACTTTATACCGGATTCTTGGTAGTTCTATTTCCAGCCTAAGCTGGGCACTATATGTATTGTACACCCAATTCAGCTAGTGCTGGTGTGGAACAACTGCATATTATGGTTGTTTATATGTGTTTCTTGTATACGTTATTTCTCTAGTTAAGCTAAGTTGAAGAAAGGCCACATTGATGCAGGTTATTCACATTGATATAGCTCACTGAATAGCTTAGTTGTACTTTTGATTATTTCAAACTTGAGTTTATCATTTCATTTTTGCTTATAATTTGCTCATCTGTTAAAGAACCTTATCCTGTTTTTTAAGTTAAAATTTTCAGACGGTCTGAGCAAATAGCTAATTGAAAAATGTCATTTTCAAGTTTCTTAATCTATTATTATAAAGGATTTGGAACATGAACCTGTCTGAGGGTTGTAACTTTATGTCATAGAGTTTCTGTTCTTGAATTTGTTATGATGACGAAGCCATGCATGCTTAACATGAACCTGGCGAGCTGTTATACAGCCACATTTTTCCTTTGCTTATCACATTTGTTTTCGTATCCTGTTCTAGACGACAATGGGTTCGAGAAGAAGATTTGGCAAAGAACTTAAAACTACATTCGAAGCAATTACGTCGAACTCTAAGGTTTTTAGAAGAGGAAAAATTGGTTACCCGAGATCATAGAAGGGAGGTCAGTGCCGATTCTTTCAATGCATCTTGTTACTGTGCCTGTTAGGTTAGTAAATTGGAATTTCTTAGTATGAAGTTTTAAGCATCTTAACTTGATTGTCTATAGCATCTAAGGTGCTTATGTTGAATGAAGTTTGTTCGTTCTTTTGGGAAATTTTGTTAAAAATAAACAGAGAATTGTTTCAAGGAACGACAAGGCCATTGGAGACCTTGGGAAGTTACCGTTTTTGTTGCCTCCAGGTGTACTTTGTTTCAATTTGGGTTCAATTATAAGTTATGTGCTGAACTTTCTGGTTTGTGTCTATTTGGTTCTTGAACTTTAAAATGTGTCTAATAAATCTTTGAACTTTCAATTTTGTGTCTAATAAGTCATTTTCATTTTCATATTTTTCAATTTTGTGTGATGAACTTTTTAGTTTGTGTTGATATGCTTTTCCAGACATTTTCAATTTTGTGTCCAATAAGTTATTAATAGGCATGCTCTTCATTTTTTTGCTCTTTGCTTTTCCAGACAGCTAAGGGAGCAAAGATATTTAGCGCTGCAATTGCTGCCACAGCCGATGGCCAACACCCGGGGAAGGAGGGGGATGAAAAGATTAAGATGCACACACATTCTTATTGCTCGCTAGACTATGCACAGGTTTCTTTTATATATGTACTTCAATTAGTTGCTTCATCGCTGAATAATAATTGTATCTAAACCCAGTGAAAACAGACTTTAACTCTGGTCAGTTCCCTTAGTATAATCCTGGTTACAGGTCTATGATGTGGTTAGATACAGACTGCACCGCATGAAGAAAAAACTGAAAGATGAACTGGAGGACAAGAACACAGTTCAAGAGTATATATGCCCCAACTGTTCGAGAAGGTTTTGATGATATGTTATTTTTCTCTTAAGAAATGTTCTTTCTGATATTTTGTAATTTTAAACTGGATGGAATCACAGCACTGCACGCTTGTTATTGACTTTTTAATCTGGAAACAAGCTTGAAAATTTAATGATATTGATTAGGTACACTGCTTTGGATGCTCTTCGATTAATCTCTCTTGAGGATGAATACTTCCATTGTGAAAATTGCAATGGCGAGCTGGTTGCTGAGAGTGACAAACTGGCTGCTGCCCAAGGAGGGGATGGAGATGATAATGCCAGGAAGCGCCGGCATGAAAAATTGAAGGACATGCTTCAGAAGATGGAGGTTTGATCTCTTGAAAAAGAATTTTATTTTCCAACTTCAAATCTTTTTCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATTTAATCATAACGATCTTGAAAATTTTTTTATCCTGGATATGAGAACACAAGGTATAACTCTATGCTGTAATGGGGATCATTGATTGCTGGAGTTTTTTTACATTTGTTAGTTGAATATAACACTGACCTTCATCTTCAAGCCATTTTTCTGAAATAATTTATGAATTGTGTTTGTTCCCTTGAGTTTTAGAAAAGGATTTTCCTATTTCTAAATTGATGAATAAATCAAATAATTGTAGGTTCAGCTTAAACCTTTAATGGAACAACTCAGCAGAGTCAAAGATTTGCCAGTTCCAGAGTTTGGAACTCTTTTAGCATGGGAAGCTCGTGCAAGTGCAGCTGCACGTGGTGCAAATGGTGATCTCAATGGCAATGATCCCTCAAAATCATCACAAGGTTTAGGATATGGGGGAACGCCTATGCCTTTTGTTGGCGAGACCAAGGTATCCCATTTTTTCACCTCATGCTTGTTATATTGTTGGATCTTGAAAGGAACCAGTCTAACGTTCATGAGTTTTTGAATGAACCTGTTAGGTTGAAGTTGCCTTTTCTGGGGCTGAGGGCAAGGGAGTGAATGTTAAATCTGAATCTGAGAACACTGCTCTGAAAGTGTTACCTCCTTGGATGATCAAAGAAGGGATGAACCTCACAAAGGAACAACGCGGGGAGGTCAAAGGGGACTCAAAGATGGATGCTGGTTCAGCTTCTGCTCAGTTTTCTGATGATAAAAAGTCATCGGCCAATGATGATGATAAAACGAATATACAGGTTCGTTCAATTAGACTGGCTCTTTTCATTTCTTATGAATTAAAGAGTTTTTTTAATCATAAAAATTGAAAGAGATTATATGATTTATGTACTGGTTGGCTGTATTGTAGGATGAGTATGTTAAAGCTTATTATGCTGCTATACTGAAGAAGCAACAAGAGCTTGAAGAAGCTGCTAAGGCACAAAAGGAATTATCCAGTACAGAGGTTACTGAAAACTTGTCTTACACAAATTCCAGTCGCCAGGTAGGAATGAAGGCAAAACGTGAAGAGGATGAAGAAGAAGATGATATTGAATGGGAGGAGGCTCCAATAGAGGGTGAGACGTGGCTTTTCTTTTCCACGTTCGACTCTTTAAGTGTTTTATGGTGTTTATATCCTGCTTATTATGTGTAAAAGTAAGTTGGAATTTAAGGAGGAACCTTGCCTTTCTTGCCGTATTACAGGTAACGCAAATGAAAATTACAAGGTTGGTGACTTGAATGTTGAAGCATCAGCTTCGGTAGAAGATGAAGAAGAAGATGATGTGGATTGGGAGGAAGGTTGAAGAGGCAAACAGAATTTTATACCCCAATATATGATACAAGGTGATATTGCCTTTCTTCCATCTGGAAGGCCTTAGTGAATTACGGTAGGAGCTCTGTAGTTAATCTTGTGCAGTCGTGTTACTTGTTATATTAGAGCCGATTTTAAAGATCCCTAACCTATACTTGCTTGATTTACTGCTGATATTTCATCTTGGGGGCTCTGATGAATTGAATTGTTCTTTACCAGTTTGGTGTGTGGGAAGAAAAGATGAAGGAAAATAG

mRNA sequence

TCCATTTTTTCTGTTCCTTTTCTCCCACGATTCTCAGATCGCTCTCTGCGAAGTCCTGCTCGAGTCGAATACTGAAAAAAATCAGCTCACATGTAATAGCTACACCAGCACTTGAGCAATTGAATCCCAAGTTAATTCATCATCATCATGAGTATCGAACCTTTTAACAGGTTGGTGAAGCTAGCTGCAAGAGCTTTCTACGATGACATTACGACTAAAGGAGATAATCAGCCCAAGACCGGTCGGAGTGATAATAGGGGAATCGCGGTTGTCGTGCTTGATGCTCTCACGAGACGACAATGGGTTCGAGAAGAAGATTTGGCAAAGAACTTAAAACTACATTCGAAGCAATTACGTCGAACTCTAAGGTTTTTAGAAGAGGAAAAATTGGTTACCCGAGATCATAGAAGGGAGACAGCTAAGGGAGCAAAGATATTTAGCGCTGCAATTGCTGCCACAGCCGATGGCCAACACCCGGGGAAGGAGGGGGATGAAAAGATTAAGATGCACACACATTCTTATTGCTCGCTAGACTATGCACAGGTCTATGATGTGGTTAGATACAGACTGCACCGCATGAAGAAAAAACTGAAAGATGAACTGGAGGACAAGAACACAGTTCAAGAGTATATATGCCCCAACTGTTCGAGAAGGTACACTGCTTTGGATGCTCTTCGATTAATCTCTCTTGAGGATGAATACTTCCATTGTGAAAATTGCAATGGCGAGCTGGTTGCTGAGAGTGACAAACTGGCTGCTGCCCAAGGAGGGGATGGAGATGATAATGCCAGGAAGCGCCGGCATGAAAAATTGAAGGACATGCTTCAGAAGATGGAGGTTCAGCTTAAACCTTTAATGGAACAACTCAGCAGAGTCAAAGATTTGCCAGTTCCAGAGTTTGGAACTCTTTTAGCATGGGAAGCTCGTGCAAGTGCAGCTGCACGTGGTGCAAATGGTGATCTCAATGGCAATGATCCCTCAAAATCATCACAAGGTTTAGGATATGGGGGAACGCCTATGCCTTTTGTTGGCGAGACCAAGGTTGAAGTTGCCTTTTCTGGGGCTGAGGGCAAGGGAGTGAATGTTAAATCTGAATCTGAGAACACTGCTCTGAAAGTGTTACCTCCTTGGATGATCAAAGAAGGGATGAACCTCACAAAGGAACAACGCGGGGAGGTCAAAGGGGACTCAAAGATGGATGCTGGTTCAGCTTCTGCTCAGTTTTCTGATGATAAAAAGTCATCGGCCAATGATGATGATAAAACGAATATACAGGATGAGTATGTTAAAGCTTATTATGCTGCTATACTGAAGAAGCAACAAGAGCTTGAAGAAGCTGCTAAGGCACAAAAGGAATTATCCAGTACAGAGGTTACTGAAAACTTGTCTTACACAAATTCCAGTCGCCAGGTAGGAATGAAGGCAAAACGTGAAGAGGATGAAGAAGAAGATGATATTGAATGGGAGGAGGCTCCAATAGAGGGTAACGCAAATGAAAATTACAAGGTTGGTGACTTGAATGTTGAAGCATCAGCTTCGGTAGAAGATGAAGAAGAAGATGATGTGGATTGGGAGGAAGTCGTGTTACTTGTTATATTAGAGCCGATTTTAAAGATCCCTAACCTATACTTGCTTGATTTACTGCTGATATTTCATCTTGGGGGCTCTGATGAATTGAATTGTTCTTTACCAGTTTGGTGTGTGGGAAGAAAAGATGAAGGAAAATAG

Coding sequence (CDS)

ATGAGTATCGAACCTTTTAACAGGTTGGTGAAGCTAGCTGCAAGAGCTTTCTACGATGACATTACGACTAAAGGAGATAATCAGCCCAAGACCGGTCGGAGTGATAATAGGGGAATCGCGGTTGTCGTGCTTGATGCTCTCACGAGACGACAATGGGTTCGAGAAGAAGATTTGGCAAAGAACTTAAAACTACATTCGAAGCAATTACGTCGAACTCTAAGGTTTTTAGAAGAGGAAAAATTGGTTACCCGAGATCATAGAAGGGAGACAGCTAAGGGAGCAAAGATATTTAGCGCTGCAATTGCTGCCACAGCCGATGGCCAACACCCGGGGAAGGAGGGGGATGAAAAGATTAAGATGCACACACATTCTTATTGCTCGCTAGACTATGCACAGGTCTATGATGTGGTTAGATACAGACTGCACCGCATGAAGAAAAAACTGAAAGATGAACTGGAGGACAAGAACACAGTTCAAGAGTATATATGCCCCAACTGTTCGAGAAGGTACACTGCTTTGGATGCTCTTCGATTAATCTCTCTTGAGGATGAATACTTCCATTGTGAAAATTGCAATGGCGAGCTGGTTGCTGAGAGTGACAAACTGGCTGCTGCCCAAGGAGGGGATGGAGATGATAATGCCAGGAAGCGCCGGCATGAAAAATTGAAGGACATGCTTCAGAAGATGGAGGTTCAGCTTAAACCTTTAATGGAACAACTCAGCAGAGTCAAAGATTTGCCAGTTCCAGAGTTTGGAACTCTTTTAGCATGGGAAGCTCGTGCAAGTGCAGCTGCACGTGGTGCAAATGGTGATCTCAATGGCAATGATCCCTCAAAATCATCACAAGGTTTAGGATATGGGGGAACGCCTATGCCTTTTGTTGGCGAGACCAAGGTTGAAGTTGCCTTTTCTGGGGCTGAGGGCAAGGGAGTGAATGTTAAATCTGAATCTGAGAACACTGCTCTGAAAGTGTTACCTCCTTGGATGATCAAAGAAGGGATGAACCTCACAAAGGAACAACGCGGGGAGGTCAAAGGGGACTCAAAGATGGATGCTGGTTCAGCTTCTGCTCAGTTTTCTGATGATAAAAAGTCATCGGCCAATGATGATGATAAAACGAATATACAGGATGAGTATGTTAAAGCTTATTATGCTGCTATACTGAAGAAGCAACAAGAGCTTGAAGAAGCTGCTAAGGCACAAAAGGAATTATCCAGTACAGAGGTTACTGAAAACTTGTCTTACACAAATTCCAGTCGCCAGGTAGGAATGAAGGCAAAACGTGAAGAGGATGAAGAAGAAGATGATATTGAATGGGAGGAGGCTCCAATAGAGGGTAACGCAAATGAAAATTACAAGGTTGGTGACTTGAATGTTGAAGCATCAGCTTCGGTAGAAGATGAAGAAGAAGATGATGTGGATTGGGAGGAAGTCGTGTTACTTGTTATATTAGAGCCGATTTTAAAGATCCCTAACCTATACTTGCTTGATTTACTGCTGATATTTCATCTTGGGGGCTCTGATGAATTGAATTGTTCTTTACCAGTTTGGTGTGTGGGAAGAAAAGATGAAGGAAAATAG

Protein sequence

MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEEVVLLVILEPILKIPNLYLLDLLLIFHLGGSDELNCSLPVWCVGRKDEGK

Homology

[Close]

BLAST of CmoCh10G002710 vs. ExPASy Swiss-Prot
Match: Q557M8 (General transcription factor IIE subunit 1 OS=Dictyostelium discoideum OX=44689 GN=gtf2e1-1 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.7e-17
Identity = 98/391 (25.06%), Postives = 169/391 (43.22%), Query Frame = 0


Query: 9   LVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQ 68
           LVK+  RAFY D                   AV++   L  ++ +++EDLA  L++  K 
Sbjct: 14  LVKMVIRAFYPD-----------------EYAVIIDGLLREKKRIKDEDLALRLRIQQKY 73

Query: 69  LRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKMHTHSYCSL 128
           +R+ L  L+ + +V     +  AKG                P + G       TH    +
Sbjct: 74  VRKILMDLKGDSMVKSSDVKVEAKG----------------PNERGS------THLLWYI 133

Query: 129 DYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHC 188
           DY  + D+V+Y+L+  +KK++     K  VQ Y C  C + YTALD  +L++++     C
Sbjct: 134 DYKHIIDIVKYKLYMFRKKMESVKVQKIDVQTYKCQTCHKVYTALDIPKLLNMDTGALAC 193

Query: 189 ENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLPV 248
           E C+GEL  E +  +  Q           +H+   D+      QL+ ++EQL + +   +
Sbjct: 194 EICDGELEEELNNESLTQ---------TAKHQ--SDLFS----QLRKIIEQLKKTEGHNI 253

Query: 249 PEFGTLLAWEARASAAARGANGDLNGND-----PSKSSQGLGYGGTPMPFVGETKVEVAF 308
           P F   LA      +A +G +  +N N      P  S+  +  G      +  T   + F
Sbjct: 254 PLFARDLA----DLSADQGPSYTINTNSSLGMGPKPSAFPVAQGAATSHHIDPTNENIEF 313

Query: 309 -------SGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSAS 368
                   G E     VK E++ T L  LPPW++    N  K +   VK +S ++    +
Sbjct: 314 HVDILDTDGIEINKAVVKKENKKTGLASLPPWLLPS--NSFKNR--NVKSNSILNNNQQT 341

Query: 369 AQFSDDKKSSANDDDKTNIQD---EYVKAYY 385
              ++++ ++  +  K + QD    Y+K +Y
Sbjct: 374 QTSTNEQPTAVKEQIKID-QDFYINYIKTHY 341

[Close]

BLAST of CmoCh10G002710 vs. ExPASy Swiss-Prot
Match: P36100 (Transcription initiation factor IIE subunit alpha OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TFA1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 6.1e-09
Identity = 97/446 (21.75%), Postives = 187/446 (41.93%), Query Frame = 0


Query: 38  GIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIF 97
           G  V+VLDA+     + E+DL + L ++  +L   +  L  ++L++   +RE        
Sbjct: 23  GSFVLVLDAILFHSVLAEDDLKQLLSINKTELGPLIARLRSDRLISIHKQRE-------- 82

Query: 98  SAAIAATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNT 157
                       P  +  E++      Y  + Y    D +++++H++ ++LKD+L+  + 
Sbjct: 83  ----------YPPNSKSVERV------YYYVKYPHAIDAIKWKVHQVVQRLKDDLDKNSE 142

Query: 158 VQEYICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKR 217
              Y+CP C  +YT L+A++L++ +   F C  C+  LV              +D++ K+
Sbjct: 143 PNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLV--------------EDDSGKK 202

Query: 218 RHEKLKDMLQKMEVQLKPLMEQLSRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDP 277
             EK +D L ++  Q++P+++ L ++ D  + E  T     AR       ++     N  
Sbjct: 203 NKEK-QDKLNRLMDQIQPIIDSLKKIDDSRIEE-NTFEIALARLIPPQNQSHAAYTYNPK 262

Query: 278 SKSSQGLGYGGTPMPFVGETKVEVAFSGAEGKG------VNVKSESENTALKVLPPWMIK 337
             S+        P+P +  T +    S   G        +N+ + S+  A + L     +
Sbjct: 263 KGSTMFRPGDSAPLPNLMGTALGNDSSRRAGANSQATLHINITTASDEVAQRELQERQAE 322

Query: 338 E--GMNLTKE-QRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAIL 397
           E    N   E  +    G + +       +F     +SA D    + +     +Y     
Sbjct: 323 EKRKQNAVPEWHKQSTIGKTALGRLDNEEEFDPVVTASAMDSINPDNEPAQETSYQNNRT 382

Query: 398 KKQQELEEAAKAQKELSSTEVTENLSYTNSSRQVGMKAKREEDEEEDDIEWEEAPIEGNA 457
             +QE+EE     +E   T      +      ++  + + EE+EEED+ E EE  +E   
Sbjct: 383 LTEQEMEE-----RENEKTLNDYYAALAKKQAKLNKEEEEEEEEEEDEEEEEEEEMEDVM 418

Query: 458 NENYKVGDLNVEASASVEDEEEDDVD 475
           ++N +    N     ++EDE ED  D
Sbjct: 443 DDNDETAREN-----ALEDEFEDVTD 418

[Close]

BLAST of CmoCh10G002710 vs. ExPASy Swiss-Prot
Match: Q9P3W1 (Transcription initiation factor IIE subunit alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tfa1 PE=1 SV=3)

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-07
Identity = 113/505 (22.38%), Postives = 204/505 (40.40%), Query Frame = 0


Query: 4   EPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLK 63
           E   RL+K+  RAFY+                     ++ +DA+ R   + +E  A  + 
Sbjct: 6   EIVQRLIKMIMRAFYET------------------RHIIFMDAILRHSALTDEQTALLMG 65

Query: 64  LHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKMHTH 123
           +  K+ R     L E++L+    R E                      KEG ++ + HT 
Sbjct: 66  IPIKECRFIAGKLREDRLLAIQSRTEM---------------------KEGQQR-QYHT- 125

Query: 124 SYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLED 183
           +Y  +D+    D +++R+H++ K ++D + +    + Y+CP C++++++LD L L++ E 
Sbjct: 126 TYFYIDFCSTIDSIKWRMHQLVKTVEDRMRNDFDSKGYVCPFCNKKFSSLDVLSLVTNEG 185

Query: 184 EYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRV 243
             F C  C  EL             D +++A     +K    L K+  Q+  +++ L RV
Sbjct: 186 T-FACNVCGTEL------------KDDEESAEMMSSQK---RLGKLMGQVNGIIDALKRV 245

Query: 244 KDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAF 303
            ++ VP+     A E     +    N  L+  + SKS+  +              + V F
Sbjct: 246 DEIVVPQNNFQSALEHAVPVSLDTQN--LSQQNLSKSNSDVRLS------TSSPSITVDF 305

Query: 304 SG---AEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS 363
           S     + K      +    A  +LP W      + T    G +       AG+  A   
Sbjct: 306 SADKETDEKRERNCDKQVKAAQNILPEW------HATSTISGSI-----TRAGAKDAALH 365

Query: 364 DDKKSSAND--DDKTNIQDE--YVKAYYAAILKKQQELEEAAKA-----QKELSSTEVTE 423
             +  + N+  D KT+I  E   + AYYA +  KQ+E  E   +     +++    +VT 
Sbjct: 366 SFRTETVNEVQDTKTDITSEKSALDAYYATLRAKQKEESEFMDSENVDDEEDDDFLDVTT 425

Query: 424 NLSYTNSSRQVG-MKAKREEDEEEDDIEWEEA-PIEGN-------ANENYKVGDLNVEAS 479
             S  N S   G +K K E    + DI+ +    IE N       +      GD  ++ S
Sbjct: 426 ATSLQNKSTDYGSVKRKTENLNSDSDIQNKRTKSIEENNSLPPIVSTNGITDGDTEMQES 434

[Close]

BLAST of CmoCh10G002710 vs. ExPASy Swiss-Prot
Match: P29083 (General transcription factor IIE subunit 1 OS=Homo sapiens OX=9606 GN=GTF2E1 PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 4.8e-06
Identity = 95/414 (22.95%), Postives = 169/414 (40.82%), Query Frame = 0


Query: 42  VVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAI 101
           + LD L R   V+EED+ + LK   KQLR  L  L+ +K +    R ETA          
Sbjct: 32  LALDILIRNSCVKEEDMLELLKFDRKQLRSVLNNLKGDKFIKCRMRVETA---------- 91

Query: 102 AATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEY 161
              ADG           K   H+Y  ++Y  + +VV+Y+L  M+++++ +  D      +
Sbjct: 92  ---ADG-----------KTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERDSTNRASF 151

Query: 162 ICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEK 221
            CP CS  +T L+A +L       F C  C+ E+             + D++A  ++   
Sbjct: 152 KCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEV-------------EEDESAMPKK--D 211

Query: 222 LKDMLQKMEVQLKPLMEQLSRVKDLPV------PEFGTLLAW-EARASAAARGANGDLNG 281
            + +L +   Q++P+   L   +D+ +      PE   + A  +++  AA       L G
Sbjct: 212 ARTLLARFNEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKDHAATTAGAASLAG 271

Query: 282 NDPSKSSQGLGYGGTPMPFVGETKVEVAFSGAEGKGVNVKSESENTALKVLPPWMIKEGM 341
               ++        T  P   +   +      + +    ++  E  + K  P W+ +  +
Sbjct: 272 GHHREA------WATKGPSYEDLYTQNVVINMDDQEDLHRASLEGKSAKERPIWLRESTV 331

Query: 342 NLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQEL 401
                     +G   MDA      F + ++  A  DD     +E ++A      K    +
Sbjct: 332 QGAYGSEDMKEGGIDMDA------FQEREEGHAGPDD----NEEVMRALLIHEKKTSSAM 389

Query: 402 EEAAKAQKELSSTEVTENLSYTNSS------RQVGMKA-KREEDEEEDDIEWEE 442
             +  A   +++   +++ S T+ S      R   +   KREEDEEEDD E+EE
Sbjct: 392 AGSVGAAAPVTAANGSDSESETSESDDDSPPRPAAVAVHKREEDEEEDD-EFEE 389

[Close]

BLAST of CmoCh10G002710 vs. ExPASy Swiss-Prot
Match: Q5R8H5 (General transcription factor IIE subunit 1 OS=Pongo abelii OX=9601 GN=GTF2E1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.8e-06
Identity = 95/414 (22.95%), Postives = 168/414 (40.58%), Query Frame = 0


Query: 42  VVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAI 101
           + LD L R   V+EED+ + LK   KQLR  L  L+ +K +    R ETA          
Sbjct: 32  LALDILIRNPCVKEEDMLELLKFDRKQLRSVLNNLKGDKFIKCRMRVETA---------- 91

Query: 102 AATADGQHPGKEGDEKIKMHTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEY 161
              ADG           K   H+Y  ++Y  + +VV+Y+L  M+++++ +  D      +
Sbjct: 92  ---ADG-----------KTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERDSTNRASF 151

Query: 162 ICPNCSRRYTALDALRLISLEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEK 221
            CP CS  +T L+A +L       F C  C+ E+             + D++A  ++   
Sbjct: 152 KCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEV-------------EEDESAMPKK--D 211

Query: 222 LKDMLQKMEVQLKPLMEQLSRVKDLPV------PEFGTLLAW-EARASAAARGANGDLNG 281
            + +L +   Q++P+   L   +D+ +      PE   + A  +++  AA       L G
Sbjct: 212 ARTLLARFNEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKDHAATTAGAASLAG 271

Query: 282 NDPSKSSQGLGYGGTPMPFVGETKVEVAFSGAEGKGVNVKSESENTALKVLPPWMIKEGM 341
               ++        T  P   +   +      +      ++  E  + K  P W+ +  +
Sbjct: 272 GHHREA------WATKGPSYEDLYTQNVVINMDDHEDLHRASLEGKSAKERPIWLRESTV 331

Query: 342 NLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSANDDDKTNIQDEYVKAYYAAILKKQQEL 401
                     +G   MDA      F + ++  A  DD     +E ++A      K    +
Sbjct: 332 QGAYSSEDMKEGGIDMDA------FQEHEEGRAGPDD----NEEVMRALLIHEKKTSSAM 389

Query: 402 EEAAKAQKELSSTEVTENLSYTNSS------RQVGMKA-KREEDEEEDDIEWEE 442
             +  A   +++   +++ S T+ S      R   +   KREEDEEEDD E+EE
Sbjct: 392 AGSVGAAAPVTTANGSDSESETSESDDDSPPRPAAVAVHKREEDEEEDD-EFEE 389

[Close]

BLAST of CmoCh10G002710 vs. ExPASy TrEMBL
Match: A0A6J1E5J2 (Transcription initiation factor IIE subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111430131 PE=3 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 2.9e-264
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 0


Query: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60
           MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM 120
           NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM
Sbjct: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM 120

Query: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180
           HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS
Sbjct: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180

Query: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240
           LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL
Sbjct: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240

Query: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300
           SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Sbjct: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300

Query: 301 VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS 360
           VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS
Sbjct: 301 VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS 360

Query: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR 420
           DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR
Sbjct: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR 420

Query: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 478
           QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE
Sbjct: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 477

[Close]

BLAST of CmoCh10G002710 vs. ExPASy TrEMBL
Match: A0A6J1JA07 (Transcription initiation factor IIE subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111484895 PE=3 SV=1)

HSP 1 Score: 910.2 bits (2351), Expect = 3.9e-261
Identity = 469/477 (98.32%), Postives = 474/477 (99.37%), Query Frame = 0


Query: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60
           MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM 120
           NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA+AATADGQHPGKEGDEKIKM
Sbjct: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAVAATADGQHPGKEGDEKIKM 120

Query: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180
           HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS
Sbjct: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180

Query: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240
           LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL
Sbjct: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240

Query: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300
           SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Sbjct: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300

Query: 301 VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS 360
           VAFSGAE KGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKG+SKMDAGSASAQFS
Sbjct: 301 VAFSGAESKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGESKMDAGSASAQFS 360

Query: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR 420
           DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAK QKELS TE+T+NLSYTN+SR
Sbjct: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKGQKELSRTEITDNLSYTNASR 420

Query: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 478
           QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE
Sbjct: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 477

[Close]

BLAST of CmoCh10G002710 vs. ExPASy TrEMBL
Match: A0A6J1BZ86 (Transcription initiation factor IIE subunit alpha OS=Momordica charantia OX=3673 GN=LOC111007077 PE=3 SV=1)

HSP 1 Score: 875.5 bits (2261), Expect = 1.1e-250
Identity = 453/477 (94.97%), Postives = 466/477 (97.69%), Query Frame = 0


Query: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60
           MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM 120
           NLKLHSKQLRRTLRFLEEEKL+TRDHRRETAKGAKIFSAA+AATADGQ PGKEGDEKIKM
Sbjct: 61  NLKLHSKQLRRTLRFLEEEKLITRDHRRETAKGAKIFSAAVAATADGQQPGKEGDEKIKM 120

Query: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180
           HTHSYCSLDYAQ+YDVVRYR+HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS
Sbjct: 121 HTHSYCSLDYAQIYDVVRYRMHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180

Query: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240
           LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL
Sbjct: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240

Query: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300
           SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Sbjct: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300

Query: 301 VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS 360
           VAFSGAEGKGV+VKSE+ENT LKVLPPWMIK+GMNLTKEQRGEVK +SKMDAGSA AQFS
Sbjct: 301 VAFSGAEGKGVDVKSETENTGLKVLPPWMIKKGMNLTKEQRGEVKEESKMDAGSA-AQFS 360

Query: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR 420
           DDKKSSANDDDKTN QDEYVKAYYAAILKKQQELEE+AK  +ELSSTEVTE++S  NSSR
Sbjct: 361 DDKKSSANDDDKTNFQDEYVKAYYAAILKKQQELEESAKRPEELSSTEVTESVSNANSSR 420

Query: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 478
           QVGMKAKRE DEE+DDIEWEEAPI GNANENYKVGDLNVEASASVEDEEEDDVDWEE
Sbjct: 421 QVGMKAKREGDEEDDDIEWEEAPIGGNANENYKVGDLNVEASASVEDEEEDDVDWEE 476

[Close]

BLAST of CmoCh10G002710 vs. ExPASy TrEMBL
Match: A0A5D3DYI4 (Transcription initiation factor IIE subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00230 PE=3 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 7.5e-244
Identity = 442/477 (92.66%), Postives = 460/477 (96.44%), Query Frame = 0


Query: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60
           MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM 120
           NLKLHSKQLRRTLRFLEEEKL+TRDHRRETAKGAKIFSAA+AATADGQH  KEGDEKIKM
Sbjct: 61  NLKLHSKQLRRTLRFLEEEKLITRDHRRETAKGAKIFSAAVAATADGQHQTKEGDEKIKM 120

Query: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180
           HTHSYCSLDYAQ+YDVVRYR+HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS
Sbjct: 121 HTHSYCSLDYAQIYDVVRYRMHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180

Query: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240
            EDEYFHCENCNGELVAESDKLAA QGGDGDDNARKRRHEKLKDMLQKME QLKPL+EQL
Sbjct: 181 FEDEYFHCENCNGELVAESDKLAAVQGGDGDDNARKRRHEKLKDMLQKMEAQLKPLVEQL 240

Query: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300
           +RVKDLPVPEFGTLLAWEARASAAARG NGDLNGNDPSKSSQ  GYGGTPMPFVGETKVE
Sbjct: 241 TRVKDLPVPEFGTLLAWEARASAAARGVNGDLNGNDPSKSSQ--GYGGTPMPFVGETKVE 300

Query: 301 VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS 360
           VAFSGA+GKGV+VKSES+NT LKVLPPWMIK+GMNLTKEQRGEVK +SK DAGSASAQFS
Sbjct: 301 VAFSGADGKGVDVKSESKNTGLKVLPPWMIKQGMNLTKEQRGEVKDESKTDAGSASAQFS 360

Query: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR 420
           DDKKS ANDDDKTNIQDEYVKAYYAAILKKQQELEEAAK Q+ELSSTEVTE+++ TNSSR
Sbjct: 361 DDKKSLANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKGQQELSSTEVTESVANTNSSR 420

Query: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 478
           QVGMKAKREED+++DDIEWEEAPI GNANENYKV DLNVEASA VEDEEEDDVDWEE
Sbjct: 421 QVGMKAKREEDDDDDDIEWEEAPIGGNANENYKV-DLNVEASALVEDEEEDDVDWEE 474

[Close]

BLAST of CmoCh10G002710 vs. ExPASy TrEMBL
Match: A0A5A7UX12 (Transcription initiation factor IIE subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003550 PE=3 SV=1)

HSP 1 Score: 852.4 bits (2201), Expect = 9.8e-244
Identity = 442/477 (92.66%), Postives = 460/477 (96.44%), Query Frame = 0


Query: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60
           MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM 120
           NLKLHSKQLRRTLRFLEEEKL+TRDHRRETAKGAKIFSAA+AATADGQH  KEGDEKIKM
Sbjct: 61  NLKLHSKQLRRTLRFLEEEKLITRDHRRETAKGAKIFSAAVAATADGQHQTKEGDEKIKM 120

Query: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180
           HTHSYCSLDYAQ+YDVVRYR+HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS
Sbjct: 121 HTHSYCSLDYAQIYDVVRYRMHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180

Query: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240
            EDEYFHCENCNGELVAESDKLAA QGGDGDDNARKRRHEKLKDMLQKME QLKPL+EQL
Sbjct: 181 FEDEYFHCENCNGELVAESDKLAAVQGGDGDDNARKRRHEKLKDMLQKMEAQLKPLVEQL 240

Query: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300
           +RVKDLPVPEFGTLLAWEARASAAARG NGDLNGNDPSKSSQ  GYGGTPMPFVGETKVE
Sbjct: 241 TRVKDLPVPEFGTLLAWEARASAAARGVNGDLNGNDPSKSSQ--GYGGTPMPFVGETKVE 300

Query: 301 VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS 360
           VAFSGAEGKGV+VKSES+NT LKVLPPWMIK+GMNLTKEQRGEVK +SK DAGSASAQFS
Sbjct: 301 VAFSGAEGKGVDVKSESKNTGLKVLPPWMIKQGMNLTKEQRGEVKDESKTDAGSASAQFS 360

Query: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR 420
           DDKKS ANDDDKTNIQDEYVKAYYAAILKKQQELEEAAK Q+ELSSTEVTE+++ TNSSR
Sbjct: 361 DDKKSLANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKGQQELSSTEVTESVANTNSSR 420

Query: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 478
           +VGMKAKREED+++DDIEWEEAPI GNANENYKV DLNVEASA VEDEEEDDVDWEE
Sbjct: 421 RVGMKAKREEDDDDDDIEWEEAPIGGNANENYKV-DLNVEASALVEDEEEDDVDWEE 474

[Close]

BLAST of CmoCh10G002710 vs. NCBI nr
Match: XP_022922068.1 (general transcription factor IIE subunit 1-like [Cucurbita moschata] >KAG6589563.1 General transcription factor IIE subunit 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023252.1 General transcription factor IIE subunit 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 920.6 bits (2378), Expect = 6.0e-264
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 0


Query: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60
           MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM 120
           NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM
Sbjct: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM 120

Query: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180
           HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS
Sbjct: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180

Query: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240
           LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL
Sbjct: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240

Query: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300
           SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Sbjct: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300

Query: 301 VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS 360
           VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS
Sbjct: 301 VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS 360

Query: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR 420
           DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR
Sbjct: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR 420

Query: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 478
           QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE
Sbjct: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 477

[Close]

BLAST of CmoCh10G002710 vs. NCBI nr
Match: XP_023515738.1 (general transcription factor IIE subunit 1-like [Cucurbita pepo subsp. pepo] >XP_023515739.1 general transcription factor IIE subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 911.0 bits (2353), Expect = 4.8e-261
Identity = 470/477 (98.53%), Postives = 474/477 (99.37%), Query Frame = 0


Query: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60
           MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM 120
           NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM
Sbjct: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM 120

Query: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180
           HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS
Sbjct: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180

Query: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240
           LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL
Sbjct: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240

Query: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300
           SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Sbjct: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300

Query: 301 VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS 360
           VAFSGAEGKGVNVKSESENT LKVLPPWMIKEGMNLTKEQRGEVKG++KMDAGSAS QFS
Sbjct: 301 VAFSGAEGKGVNVKSESENTTLKVLPPWMIKEGMNLTKEQRGEVKGEAKMDAGSASTQFS 360

Query: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR 420
           DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAK QKELSSTEVTENLSYTNSSR
Sbjct: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKGQKELSSTEVTENLSYTNSSR 420

Query: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 478
           QVGMKAKREED+EEDDIEWEEAPI+GNANENYKVGDLNVEASASVEDEEEDDVDWEE
Sbjct: 421 QVGMKAKREEDDEEDDIEWEEAPIDGNANENYKVGDLNVEASASVEDEEEDDVDWEE 477

[Close]

BLAST of CmoCh10G002710 vs. NCBI nr
Match: XP_022987307.1 (general transcription factor IIE subunit 1-like [Cucurbita maxima])

HSP 1 Score: 910.2 bits (2351), Expect = 8.2e-261
Identity = 469/477 (98.32%), Postives = 474/477 (99.37%), Query Frame = 0


Query: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60
           MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM 120
           NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAA+AATADGQHPGKEGDEKIKM
Sbjct: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAVAATADGQHPGKEGDEKIKM 120

Query: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180
           HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS
Sbjct: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180

Query: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240
           LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL
Sbjct: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240

Query: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300
           SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Sbjct: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300

Query: 301 VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS 360
           VAFSGAE KGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKG+SKMDAGSASAQFS
Sbjct: 301 VAFSGAESKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGESKMDAGSASAQFS 360

Query: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR 420
           DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAK QKELS TE+T+NLSYTN+SR
Sbjct: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKGQKELSRTEITDNLSYTNASR 420

Query: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 478
           QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE
Sbjct: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 477

[Close]

BLAST of CmoCh10G002710 vs. NCBI nr
Match: XP_022134956.1 (general transcription factor IIE subunit 1 [Momordica charantia])

HSP 1 Score: 875.5 bits (2261), Expect = 2.2e-250
Identity = 453/477 (94.97%), Postives = 466/477 (97.69%), Query Frame = 0


Query: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60
           MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM 120
           NLKLHSKQLRRTLRFLEEEKL+TRDHRRETAKGAKIFSAA+AATADGQ PGKEGDEKIKM
Sbjct: 61  NLKLHSKQLRRTLRFLEEEKLITRDHRRETAKGAKIFSAAVAATADGQQPGKEGDEKIKM 120

Query: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180
           HTHSYCSLDYAQ+YDVVRYR+HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS
Sbjct: 121 HTHSYCSLDYAQIYDVVRYRMHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180

Query: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240
           LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL
Sbjct: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240

Query: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300
           SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE
Sbjct: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300

Query: 301 VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS 360
           VAFSGAEGKGV+VKSE+ENT LKVLPPWMIK+GMNLTKEQRGEVK +SKMDAGSA AQFS
Sbjct: 301 VAFSGAEGKGVDVKSETENTGLKVLPPWMIKKGMNLTKEQRGEVKEESKMDAGSA-AQFS 360

Query: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR 420
           DDKKSSANDDDKTN QDEYVKAYYAAILKKQQELEE+AK  +ELSSTEVTE++S  NSSR
Sbjct: 361 DDKKSSANDDDKTNFQDEYVKAYYAAILKKQQELEESAKRPEELSSTEVTESVSNANSSR 420

Query: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 478
           QVGMKAKRE DEE+DDIEWEEAPI GNANENYKVGDLNVEASASVEDEEEDDVDWEE
Sbjct: 421 QVGMKAKREGDEEDDDIEWEEAPIGGNANENYKVGDLNVEASASVEDEEEDDVDWEE 476

[Close]

BLAST of CmoCh10G002710 vs. NCBI nr
Match: XP_038880289.1 (general transcription factor IIE subunit 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 874.8 bits (2259), Expect = 3.8e-250
Identity = 455/477 (95.39%), Postives = 466/477 (97.69%), Query Frame = 0


Query: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60
           MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
Sbjct: 1   MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 61  NLKLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKM 120
           NLKLHSKQLRRTLRFLEEEKL+TRDHRRETAKGAKIFSAA+AATADGQHP KEGDEKIKM
Sbjct: 61  NLKLHSKQLRRTLRFLEEEKLITRDHRRETAKGAKIFSAAVAATADGQHPVKEGDEKIKM 120

Query: 121 HTHSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180
           HTHSYCSLDYAQ+YDVVRYR+HRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS
Sbjct: 121 HTHSYCSLDYAQIYDVVRYRMHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180

Query: 181 LEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240
            EDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL
Sbjct: 181 FEDEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQL 240

Query: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVE 300
           SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKS+QGLGYGGTPMPFVGETKVE
Sbjct: 241 SRVKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSAQGLGYGGTPMPFVGETKVE 300

Query: 301 VAFSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFS 360
           VAFSGAEGKGV+VKSESENT LKVLPPWMIK+GMNLTKEQRGEVK +SKMDAGSASAQFS
Sbjct: 301 VAFSGAEGKGVDVKSESENTGLKVLPPWMIKKGMNLTKEQRGEVKDESKMDAGSASAQFS 360

Query: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSR 420
           DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAK Q+EL STEVTEN++  NSSR
Sbjct: 361 DDKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKGQEELPSTEVTENVANRNSSR 420

Query: 421 QVGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 478
           QVGMKAKREED EEDDIEWEEAPI GNANENYKV DLNVEASASVEDEEEDDVDWEE
Sbjct: 421 QVGMKAKREED-EEDDIEWEEAPIGGNANENYKV-DLNVEASASVEDEEEDDVDWEE 475

[Close]

BLAST of CmoCh10G002710 vs. TAIR 10
Match: AT1G03280.1 (Transcription factor TFIIE, alpha subunit )

HSP 1 Score: 570.1 bits (1468), Expect = 1.9e-162
Identity = 314/483 (65.01%), Postives = 388/483 (80.33%), Query Frame = 0


Query: 3   IEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNL 62
           ++PF +LV+L ARAFYDD TTK DNQ K+ RSDNRGIA VVLDAL RRQWVREEDLAK+L
Sbjct: 13  LQPFVKLVRLVARAFYDDYTTKSDNQQKSARSDNRGIAAVVLDALARRQWVREEDLAKDL 72

Query: 63  KLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKMHT 122
           +LH+KQLR+ +R  EEEKL+ RDHR+ETAKGAK++SAA+AAT DG+      ++K+K+HT
Sbjct: 73  QLHAKQLRKIIRLFEEEKLIMRDHRKETAKGAKMYSAAVAATTDGR-----AEDKVKLHT 132

Query: 123 HSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLE 182
           HSYC LDYAQ+ DVVR+RLHRMKK+LKDELEDKNTVQEY CPNC R+Y ALDALRLIS+ 
Sbjct: 133 HSYCCLDYAQICDVVRFRLHRMKKRLKDELEDKNTVQEYGCPNCQRKYNALDALRLISMV 192

Query: 183 DEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSR 242
           D+ FHCENCNGELV E +KL + +  DGDDNAR+RR E LK+MLQK+EVQ+KPLM+QL+R
Sbjct: 193 DDSFHCENCNGELVVECNKLTSEEVVDGDDNARRRRRENLKNMLQKLEVQMKPLMDQLNR 252

Query: 243 VKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVA 302
           VKDLP+PEFG+ LAWEARA+ AAR  NGDLN NDP + SQG GYG TPMPF+GETKVEV 
Sbjct: 253 VKDLPIPEFGSFLAWEARAAMAAR-ENGDLNPNDPLR-SQG-GYGSTPMPFLGETKVEVN 312

Query: 303 FSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGS-ASAQFSD 362
                    +VKS+  +++LKVLPPWMIKEGMNLT+EQRGE++ ++K+D G+ A+A+ SD
Sbjct: 313 LGDG---NEDVKSKGGDSSLKVLPPWMIKEGMNLTEEQRGEMRQEAKVDGGAGAAAKLSD 372

Query: 363 DKKSSANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENL--SYTNSS 422
           DKKS+  + D+ +++DEY+KAYYA ++K+Q   E AA+  ++ S+ E T  +      S 
Sbjct: 373 DKKSAIGNGDEKDLKDEYLKAYYAELMKQQ---ELAARRNQQESAGEPTSGIQSGTVYSG 432

Query: 423 RQVGMKAKREEDEEED--DIEWEE-APIEGNANENYKVGDLNVEASAS--VEDEEEDDVD 478
           RQV MKAKREEDE+ED  ++EWEE AP+   AN NYKV DLNVEA AS   E+EEEDDVD
Sbjct: 433 RQVSMKAKREEDEDEDEEEVEWEEKAPV--TANGNYKV-DLNVEAEASGGEEEEEEDDVD 478

[Close]

BLAST of CmoCh10G002710 vs. TAIR 10
Match: AT4G20340.1 (Transcription factor TFIIE, alpha subunit )

HSP 1 Score: 471.9 bits (1213), Expect = 6.9e-133
Identity = 269/479 (56.16%), Postives = 348/479 (72.65%), Query Frame = 0


Query: 3   IEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNL 62
           +EPF +LV+L  R FYD+ T + DNQ K+ + + +G AV+VLDALTRRQWVREEDLAK +
Sbjct: 14  LEPFVKLVRLLVRIFYDNYTPESDNQQKSVK-NVKGSAVIVLDALTRRQWVREEDLAKEV 73

Query: 63  KLHSKQLRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKMHT 122
           K ++K+LR+ +R  EE+K V R HR+ETAK AK++S A+  T DG+      ++ +K HT
Sbjct: 74  KRNAKELRKLIRHFEEQKFVMRYHRKETAKRAKMYSYAVGGTTDGR-----AEDNVKFHT 133

Query: 123 HSYCSLDYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLE 182
           HSYC LDYAQ+YD+VRY+LHR+KKK KDELED+NTVQEY CPNC R+Y ALDALRLIS+E
Sbjct: 134 HSYCCLDYAQIYDIVRYKLHRLKKKFKDELEDRNTVQEYGCPNCKRKYNALDALRLISME 193

Query: 183 DEYFHCENCNGELVAESDKLAAAQGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSR 242
           D+ FHCENCNGELV E +KL + +  D  DNAR+R+ EK+K  LQ +E +LKPLME ++R
Sbjct: 194 DDSFHCENCNGELVMECNKLISEEVVDRGDNARRRQREKVKVWLQDLEGELKPLMELINR 253

Query: 243 VKDLPVPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVA 302
           VKDLP P F    AWEARA+ AAR  NGD N +DPS+S    GYG TPMPF+GETKVEV 
Sbjct: 254 VKDLPFPAFEPFPAWEARAAKAAR-ENGDFNPDDPSRSLG--GYGSTPMPFLGETKVEVN 313

Query: 303 FSGAEGKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDD 362
               EG   +V S   +++LK+LPPWMIK+GM LT+EQRGE++ ++ +D    +A+ SDD
Sbjct: 314 L--GEG-NEDVTSTGGDSSLKMLPPWMIKQGMKLTEEQRGEMRQEANVD--GEAAKLSDD 373

Query: 363 KKS-SANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSRQ 422
           KKS   N DD  +++DEY+KAYYAAI+++Q+   +  + +    ST      + T S RQ
Sbjct: 374 KKSVMENGDDNKDLKDEYLKAYYAAIMEQQKLAAKLNEQESAGESTTTDIESATTYSDRQ 433

Query: 423 VGMKAKREEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDE---EEDDVDWEE 478
           VGMK+KRE  EEE+D+EWEE      AN NYKV DLNVEA  + E E   E+DD+DWEE
Sbjct: 434 VGMKSKRE--EEEEDVEWEEGASVA-ANGNYKV-DLNVEAEEAEEKEDGDEDDDIDWEE 474

[Close]

BLAST of CmoCh10G002710 vs. TAIR 10
Match: AT4G20810.1 (transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein )

HSP 1 Score: 394.0 bits (1011), Expect = 1.8e-109
Identity = 235/470 (50.00%), Postives = 317/470 (67.45%), Query Frame = 0


Query: 9   LVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQ 68
           +VKL A+ FYD+ T K +NQ K+ ++ + GIAV+VLDALTRRQWVREEDLAK LKL++KQ
Sbjct: 1   MVKLVAKTFYDNYTPKNNNQKKSAKNGSGGIAVLVLDALTRRQWVREEDLAKELKLNTKQ 60

Query: 69  LRRTLRFLEEEKLVTRDHRRETAKGAKIFSAAIAATADGQHPGKEGDEKIKMHTHSYCSL 128
           LR  LR+ EE++ + R HR+E +          +AT +G+     G++K+K+H +SYC L
Sbjct: 61  LRTILRYFEEQQFIMRVHRKEKS----------SATTNGR-----GEDKVKVHMYSYCCL 120

Query: 129 DYAQVYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISLEDEYFHC 188
           DY+Q+YDV+RY+LHRMKK+ KD LEDK+ VQEY CPNC R+               +FHC
Sbjct: 121 DYSQIYDVIRYKLHRMKKEFKDVLEDKDNVQEYGCPNCKRKI--------------FFHC 180

Query: 189 ENCNGELVAESDKLAAAQ-GGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQLSRVKDLP 248
           ENCNGELV E +KL + +   DG DN R RR + LKD+LQ MEV+LKPLM+ ++R+KDLP
Sbjct: 181 ENCNGELVMECNKLTSEEVVVDGSDNPRSRR-DHLKDLLQNMEVRLKPLMDHINRIKDLP 240

Query: 249 VPEFGTLLAWEARASAAARGANGDLNGNDPSKSSQGLGYGGTPMPFVGETKVEVAFSGAE 308
           VP F +  AWE R + AAR  NGDLN +D  +  QG GYG TPMPF+GET++EV   G E
Sbjct: 241 VPSFESFPAWETRVAKAAR-ENGDLNPDDTLR-PQG-GYGSTPMPFLGETEIEVNL-GEE 300

Query: 309 GKGVNVKSESENTALKVLPPWMIKEGMNLTKEQRGEVKGDSKMDAGSASAQFSDDKKSSA 368
            + V      +++  K+ P W+IK+GMNL+ EQRGE++ ++K D G +S +         
Sbjct: 301 NEDVKSDEVGDSSRRKLTPSWLIKKGMNLSDEQRGEIRHEAKADDGGSSME--------- 360

Query: 369 NDDDKTNIQDEYVKAYYAAILKKQQELEEAAKAQKELSSTEVTENLSYTNSSRQVGMKAK 428
           N DD  N++DEY+KAYYAAIL ++QEL E    Q+          L+ ++S RQVGMK+K
Sbjct: 361 NGDDDRNLKDEYLKAYYAAIL-EEQELAEKLNQQESAGKVTTDIELATSSSDRQVGMKSK 415

Query: 429 REEDEEEDDIEWEEAPIEGNANENYKVGDLNVEASASVEDEEEDDVDWEE 478
           REE+EE      EEA +   AN NYKV DLNVEA  +  +++E+DVDW+E
Sbjct: 421 REEEEE------EEASVA--ANGNYKV-DLNVEAEEA--EQDENDVDWQE 415

The following BLAST results are available for this feature:

BLAST of CmoCh10G002710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q557M8	2.7e-17	25.06	General transcription factor IIE subunit 1 OS=Dictyostelium discoideum OX=44689 ...	[more]
P36100	6.1e-09	21.75	Transcription initiation factor IIE subunit alpha OS=Saccharomyces cerevisiae (s...	[more]
Q9P3W1	2.0e-07	22.38	Transcription initiation factor IIE subunit alpha OS=Schizosaccharomyces pombe (...	[more]
P29083	4.8e-06	22.95	General transcription factor IIE subunit 1 OS=Homo sapiens OX=9606 GN=GTF2E1 PE=...	[more]
Q5R8H5	4.8e-06	22.95	General transcription factor IIE subunit 1 OS=Pongo abelii OX=9601 GN=GTF2E1 PE=...	[more]

BLAST of CmoCh10G002710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5J2	2.9e-264	100.00	Transcription initiation factor IIE subunit alpha OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JA07	3.9e-261	98.32	Transcription initiation factor IIE subunit alpha OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1BZ86	1.1e-250	94.97	Transcription initiation factor IIE subunit alpha OS=Momordica charantia OX=3673...	[more]
A0A5D3DYI4	7.5e-244	92.66	Transcription initiation factor IIE subunit alpha OS=Cucumis melo var. makuwa OX...	[more]
A0A5A7UX12	9.8e-244	92.66	Transcription initiation factor IIE subunit alpha OS=Cucumis melo var. makuwa OX...	[more]

BLAST of CmoCh10G002710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922068.1	6.0e-264	100.00	general transcription factor IIE subunit 1-like [Cucurbita moschata] >KAG6589563...	[more]
XP_023515738.1	4.8e-261	98.53	general transcription factor IIE subunit 1-like [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022987307.1	8.2e-261	98.32	general transcription factor IIE subunit 1-like [Cucurbita maxima]	[more]
XP_022134956.1	2.2e-250	94.97	general transcription factor IIE subunit 1 [Momordica charantia]	[more]
XP_038880289.1	3.8e-250	95.39	general transcription factor IIE subunit 1 isoform X1 [Benincasa hispida]	[more]

BLAST of CmoCh10G002710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03280.1	1.9e-162	65.01	Transcription factor TFIIE, alpha subunit	[more]
AT4G20340.1	6.9e-133	56.16	Transcription factor TFIIE, alpha subunit	[more]
AT4G20810.1	1.8e-109	50.00	transcription initiation factor IIE (TFIIE) alpha subunit family protein / gener...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 59..79
None	No IPR available	COILS	Coil	Coil	coord: 219..239
None	No IPR available	COILS	Coil	Coil	coord: 387..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..372
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..422
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 402..437
None	No IPR available	SUPERFAMILY	57783	Zinc beta-ribbon	coord: 147..200
IPR002853	Transcription initiation factor IIE subunit alpha, N-terminal	SMART	SM00531	tfiie3	coord: 38..209 e-value: 3.8E-62 score: 222.5
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 147..206 e-value: 1.7E-8 score: 35.8
IPR024550	TFIIEalpha/SarR/Rpc3 HTH domain	PFAM	PF02002	TFIIE_alpha	coord: 40..93 e-value: 4.2E-7 score: 29.8
IPR039997	Transcription factor E	PANTHER	PTHR13097	TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT	coord: 5..458
IPR017919	Transcription factor TFE/TFIIEalpha HTH domain	PROSITE	PS51344	HTH_TFE_IIE	coord: 6..138 score: 34.434135
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 40..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G002710.1	CmoCh10G002710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001113	transcription open complex formation at RNA polymerase II promoter
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
cellular_component	GO:0005673	transcription factor TFIIE complex