CmoCh09G013370 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G013370
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Mitochondrial import inner membrane translocase subunit tim16
Location	Cmo_Chr09: 12117268 .. 12120264 (+)
RNA-Seq Expression	CmoCh09G013370
Synteny	CmoCh09G013370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGCAGAGGGCGCCCTTCCCTTTCTTCTTCCTTTCTCTTTGCCGTCTCCAATTTCTCTTTGCCGCCGCCGCCCCTCCCTCTCTTCACTCTCTATTGTTCAACGATTTGCCGCATCGGCGCCACCCTATCCTTATCAACCTCCTCCCCTCACACCCGGACGCTAGTAGGGTGAACGTTGGGTCGGTTTCCAGTTTTGGCAACCTCCATATCACAAGGCAAGTCTGTATGATATTTTTGTTTCTAATCCAAATATTTTATTTGAGCTTTCAAGCCCTAAATAAAACCATCCGCCACTTTCTAATTGATTTTGCAGTTCTAGCGGCGTTAACGATTTCGGACCCGTTATCGAGGCCAGCCAATTAATCATGGTATCTCTCTACTTTCTTTCTCTTCTCCTCTCATTTGATGGTGGATCGATTTCTAAGATAATGAGAAAATGATATTGAATCAGGAGCGGTTGTATAAACATAATTTATTTTGTTAGTTTTATCTGAAATATTATGTATCCGTCTCCTCCGTTTGGTAATTTGTTTCCAGAATGATTATGGATTATGGGTTTAATTCAAACTTTCATTTCGTTCCCAAATTTTCTCTGGCTGAAGTTTCGTCTAGGGGAATATTGTGTATCCGTCTCCTTCATATTTATTCTGAACATATTGGGTTCTTGATGCTTGTTTCTTGCCCTCTGCGCCTTTTAAAGCCATTTGAAATCAAGCATATTCGAAGTGTGTTTGTATATCTTGTGTCATATTATCTCTCTCTTGAGTGTACATTGATCTTTTTACCAATCAAATCAGTGCTATTCTAATTAGAACTCATGTATTTACTCCTGCTTTGTCGATAACTTCAATTTTGACAGAGGAGAGGAGTAGATATTGTATTGCATAATTTTAAGATCGTCTTATTCAGTTTGAAAACTTCCCATAAGAGAGCCTCTTTGCTTGTATGTATTTGGACAGGCTGCAAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTACGAGTAAGTACACTCTTTTTATTCCACCCTTGGGTTTTTATCTCTATTGGAAGTTGGCCAATTTTTCCTCAATATTATGGTTATTGGTGTAAATTTTTTTGGATGGCTTGATTGAAACTTGACATGTAGAACAAAAGAAACTTGCGCCTTGTCTTTGAACTATTAGAAGCTTTAATGTAAATGGGGTAAGTTTGGGGACAAGCATTTTGCCAATGAGAACAAAGCTCTGTGTGCACATAGGTTAATTTTGCTTCAGGTGATATTGGAATAGACATCATTTTTTTTTTAAATGTGCTTGGGGGATGTTAACATCCTGAAGTTCTATCTTTTACATCCTTCGTCGTCTTTGAAAGCGAGAATAATGCCTTCTTAGATTTTCTATAATTGGTCAAGAGAATTTGTTATTTTTTAGCCTGTGATATGTTCAAGGGTTGAGTGTTAATGGCTTGGATTATAGCATCCTATAGTTCCATTGTAACAGCCCAAGCTCACAGATATTGTCTTCTTTGTAGGCTTTTCCTTTCGATCTTCCCCTCAAGGTTTTTAAAACTTTAAAACACCTCTGTTGAAGAGGTTTCTACACCCTTATAAAGAATGTTTTGATCTCCTTCCTAACCAATGTGGGATCTTACAATCCACCCTCTTTTGGGGTCTAGCGAACGCTGGGGCTCTTTCCCTTTTCCAATCGATGTGGGACCCCTCCAATCCATCCCCTTCGGGGCCCAGTGTTCTTGCTGGCACACTGCCTCATGTCTACCCCATTCAGGGCTCAGCCTCATTGCTGGCACATCACCTAGTGTCTGGCTCTCGTACCATTTGTAAGGGCCCAAGCCCATTGCTAGCATATATTGTCCTCTTTGGGCTTTTCCTTTTGGGCTTCTCCTCAAGGTTTTTAAAACGTGTGCGCTAGGGAGAGGTTTTCACACCCTTACAAAGAATGTTTCGTTCTCCTCTCTAACCAACATGGGATCTTACATCCATCCTTTACCTTTATGGGATCTTACATCCATCCTTTACCTTTATGGTCAAGCTTGAAAGACTAAATATTATCTTCCTCGATCTTTTGAAAAAATGTTATTATTTCTCGAGCATGTGGTGTGAGAAGTGATTTACGGACCACAATTTGGTTAGAGATGTTTCGGTGTAGTGTTGTAATCTATTGAACACGTACTTGGATAAATGTAGTTGTTTATACAAAGTTTGTACTTTTTAATGAGGGAGAGTTTGATATTGTAGTTGAAGATGATTATGCTGAATAACAAATCTTTTTTCGTGTGGTGTAGATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACACCGTTCGCAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCCCAGAAACGCCTTGGGAGGAAATTGTGAAGGTCAAATATCTATTGCTTTTCACTAAAATAAGTTCCTTAGCTTGTATATATTATTACGAATAGGTGTTTGACAATCCTTGTTATCTTTTCAGAAATATGACGCTTTGTTCGAAAAGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTGTATCAGAGCAAAGGTCAGGATGCCCCTAGCTGAGGAATGTGTTGTGTTTTGCCCATTTAGTGTTCTTGTATAATTCTTAATTTTGTGATGGCCGGCAGCATGGCATGATTGATGATGAAATTGATGTATAATCTTTTCTTCCTCTTGTGGGAAAAAGTGACGTTTAAAATAGTATTTTAGATGAGGATGCCTTGAGAGCACCTAAATTTAATTTGTTTACTTCTAATAATTTGTAAACAATTATTTGTTACGCACAGGCCTGAAGTAGACCACGATCATTGTCCGATGAAATATTGCTAATACGAGGCTCGAGTTAGAACCCTAGACTTAGAACGATTAATTCAAAAGCC

mRNA sequence

CAAGCAGAGGGCGCCCTTCCCTTTCTTCTTCCTTTCTCTTTGCCGTCTCCAATTTCTCTTTGCCGCCGCCGCCCCTCCCTCTCTTCACTCTCTATTGTTCAACGATTTGCCGCATCGGCGCCACCCTATCCTTATCAACCTCCTCCCCTCACACCCGGACGCTAGTAGGGTGAACGTTGGGTCGGTTTCCAGTTTTGGCAACCTCCATATCACAAGGCAATTCTAGCGGCGTTAACGATTTCGGACCCGTTATCGAGGCCAGCCAATTAATCATGGCTGCAAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTACGAATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACACCGTTCGCAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCCCAGAAACGCCTTGGGAGGAAATTGTGAAGAAATATGACGCTTTGTTCGAAAAGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTGTATCAGAGCAAAGGTCAGGATGCCCCTAGCTGAGGAATGTGTTGTGTTTTGCCCATTTAGTGTTCTTGTATAATTCTTAATTTTGTGATGGCCGGCAGCATGGCATGATTGATGATGAAATTGATGTATAATCTTTTCTTCCTCTTGTGGGAAAAAGTGACGTTTAAAATAGTATTTTAGATGAGGATGCCTTGAGAGCACCTAAATTTAATTTGTTTACTTCTAATAATTTGTAAACAATTATTTGTTACGCACAGGCCTGAAGTAGACCACGATCATTGTCCGATGAAATATTGCTAATACGAGGCTCGAGTTAGAACCCTAGACTTAGAACGATTAATTCAAAAGCC

Coding sequence (CDS)

ATGGCTGCAAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTACGAATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACACCGTTCGCAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCCCAGAAACGCCTTGGGAGGAAATTGTGAAGAAATATGACGCTTTGTTCGAAAAGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTGTATCAGAGCAAAGGTCAGGATGCCCCTAGCTGA

Protein sequence

MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS

Homology

[Close]

BLAST of CmoCh09G013370 vs. ExPASy Swiss-Prot
Match: Q93VV9 (Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidopsis thaliana OX=3702 GN=PAM16L2 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-38
Identity = 84/116 (72.41%), Postives = 97/116 (83.62%), Query Frame = 0


Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60
           MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE +QN VR+A K +TEQEARQ
Sbjct: 1   MAGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQ 60

Query: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 117
           ILGVT +T WEEI++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+S+G   PS
Sbjct: 61  ILGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]

BLAST of CmoCh09G013370 vs. ExPASy Swiss-Prot
Match: Q93W66 (Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidopsis thaliana OX=3702 GN=PAM16L1 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.6e-31
Identity = 75/108 (69.44%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q T++R   +  E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQ 60

Query: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQ 109
           ILGVT ++ W+EI+KKYD LFE+NAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]

BLAST of CmoCh09G013370 vs. ExPASy Swiss-Prot
Match: Q6PBL0 (Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=7955 GN=pam16 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 6.5e-12
Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 3   AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 62
           AK LA +IVMG+ ++ RAF +A RQ  A + A+     Q   Q+    +   MT QEA+Q
Sbjct: 2   AKYLAQIIVMGAQVVGRAFARALRQEFAASQAAAEARGQAGRQSAAASSFTGMTLQEAQQ 61

Query: 63  ILGVTPETPWEEIVKKYDALFEKN--AQTGSFYLQSKVHRAKERLE 105
           IL ++  TP EEI K Y+ LF+ N  A  GSFY+QSKV RAKERL+
Sbjct: 62  ILNISTLTP-EEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERLD 106

[Close]

BLAST of CmoCh09G013370 vs. ExPASy Swiss-Prot
Match: Q9C1W5 (Mitochondrial import inner membrane translocase subunit tim16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pam16 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 46/116 (39.66%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 4   KILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNT---VRRASKVMTEQEARQ 63
           + +   I++GS ++++AFVQAY+Q + NA++    Q     +   VRR    MT QEA  
Sbjct: 5   RAVGRFIIVGSQVMSKAFVQAYKQMIANAAQQSTGQAAASKSSTAVRRGE--MTIQEAGS 64

Query: 64  ILGVTPETPWE-EIVKKYDALFEKN--AQTGSFYLQSKVHRAKERLETLYQSKGQD 114
           IL + PE+  E E+ K++  +FE N   + GSFYLQSKV RA E+L++    K Q+
Sbjct: 65  ILNIKPESLEEGELEKRFQKMFEINDPKKGGSFYLQSKVFRAHEKLKSELDQKIQE 118

[Close]

BLAST of CmoCh09G013370 vs. ExPASy Swiss-Prot
Match: Q9CQV1 (Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX=10090 GN=Pam16 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-10
Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 3   AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKV--MTEQEARQ 62
           AK LA +IVMG  ++ RAF +A RQ    +  +  A+    +    AS +  ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASQAAADARGRAGHQSAAASNLSGLSLQEAQQ 61

Query: 63  ILGVTPETPWEEIVKKYDALFEKNAQT--GSFYLQSKVHRAKERLETLYQSKGQD 114
           IL V+  +P EE+ K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + + Q+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELRIQAQE 115

[Close]

BLAST of CmoCh09G013370 vs. ExPASy TrEMBL
Match: A0A6J1EF52 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cucurbita moschata OX=3662 GN=LOC111432719 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.1e-53
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 117
           ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS
Sbjct: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]

BLAST of CmoCh09G013370 vs. ExPASy TrEMBL
Match: A0A6J1IG86 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cucurbita maxima OX=3661 GN=LOC111472606 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.7e-52
Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0


Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 117
           ILGV+PETPWEEIVKKYDALFEKN QTGSFYLQSKVHRAKERLETLYQSKGQDAPS
Sbjct: 61  ILGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]

BLAST of CmoCh09G013370 vs. ExPASy TrEMBL
Match: A0A6J1HHA5 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464057 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.5e-51
Identity = 112/116 (96.55%), Postives = 115/116 (99.14%), Query Frame = 0


Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 117
           ILG+T ETPWEEIVKKYDALFE+NAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS
Sbjct: 61  ILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]

BLAST of CmoCh09G013370 vs. ExPASy TrEMBL
Match: A0A5D3E4Y7 (Mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001310 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 9.6e-51
Identity = 110/116 (94.83%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQ
Sbjct: 56  MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 115

Query: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 117
           ILGVT ETPWEE+VKKYDALFE+NAQTGSFYLQSKVHRAKERLETLYQ+KGQDAPS
Sbjct: 116 ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 171

[Close]

BLAST of CmoCh09G013370 vs. ExPASy TrEMBL
Match: A0A6J1HVD2 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467019 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.2e-50
Identity = 112/116 (96.55%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 117
           ILGVT ETPWEEIVKKYDALFE+NAQTGSFYLQSKVHRAKERLETLYQSKGQDA S
Sbjct: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 116

[Close]

BLAST of CmoCh09G013370 vs. TAIR 10
Match: AT3G59280.1 (Protein Transporter, Pam16 )

HSP 1 Score: 160.6 bits (405), Expect = 7.5e-40
Identity = 84/116 (72.41%), Postives = 97/116 (83.62%), Query Frame = 0


Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60
           MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE +QN VR+A K +TEQEARQ
Sbjct: 1   MAGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQ 60

Query: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 117
           ILGVT +T WEEI++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+S+G   PS
Sbjct: 61  ILGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]

BLAST of CmoCh09G013370 vs. TAIR 10
Match: AT5G61880.1 (Protein Transporter, Pam16 )

HSP 1 Score: 135.6 bits (340), Expect = 2.6e-32
Identity = 75/108 (69.44%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q T++R   +  E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQ 60

Query: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQ 109
           ILGVT ++ W+EI+KKYD LFE+NAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]

BLAST of CmoCh09G013370 vs. TAIR 10
Match: AT5G61880.2 (Protein Transporter, Pam16 )

HSP 1 Score: 135.6 bits (340), Expect = 2.6e-32
Identity = 75/108 (69.44%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q T++R   +  E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQ 60

Query: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQ 109
           ILGVT ++ W+EI+KKYD LFE+NAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

The following BLAST results are available for this feature:

BLAST of CmoCh09G013370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VV9	1.1e-38	72.41	Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidop...	[more]
Q93W66	3.6e-31	69.44	Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidop...	[more]
Q6PBL0	6.5e-12	48.11	Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=...	[more]
Q9C1W5	1.2e-10	39.66	Mitochondrial import inner membrane translocase subunit tim16 OS=Schizosaccharom...	[more]
Q9CQV1	3.5e-10	41.74	Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX...	[more]

BLAST of CmoCh09G013370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EF52	2.1e-53	100.00	mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cuc...	[more]
A0A6J1IG86	1.7e-52	98.28	mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cuc...	[more]
A0A6J1HHA5	1.5e-51	96.55	mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cuc...	[more]
A0A5D3E4Y7	9.6e-51	94.83	Mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo va...	[more]
A0A6J1HVD2	1.2e-50	96.55	mitochondrial import inner membrane translocase subunit PAM16 like 2-like isofor...	[more]

BLAST of CmoCh09G013370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59280.1	7.5e-40	72.41	Protein Transporter, Pam16	[more]
AT5G61880.1	2.6e-32	69.44	Protein Transporter, Pam16	[more]
AT5G61880.2	2.6e-32	69.44	Protein Transporter, Pam16	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 53..111 e-value: 1.8E-21 score: 77.6
None	No IPR available	PFAM	PF03656	Pam16	coord: 1..111 e-value: 2.1E-21 score: 76.3
None	No IPR available	PANTHER	PTHR12388:SF6	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT PAM16 LIKE 1	coord: 1..110
IPR005341	Mitochondrial import inner membrane translocase subunit Tim16	PANTHER	PTHR12388	MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE	coord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G013370.1	CmoCh09G013370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex