CmoCh09G004550 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTAAGCTCATTCCCGCTTTGTGTTTGCAATGTTGATTTTTAGAAACCTAATTTCAAATTTCTCGCTCTCCAATGATCTTCGACGCCCGAATCTCAAACTGGTGATGAGAGAATCAAGATCCTGATCTTCCATAACGTACCGGCTGCTTCAGCTCTATTGATCGGCGTGCTTCTTGCAGTCGATTTTATCTTGAATCGACCGATTTGATCTTCGTTCTCATGGCGATAATCTATGCGCTGGTGGCGAGGGGGTCGGTGGTTTTGGCTGAATTTTATGTAACTCCGACGAATGCAAGCTCGATTTCTCGCCAAATACTCGATAAAATTCCGGGAAACGATGATTCTCATGTTTCCTACTCGCAGGATCGGTATATCTTTCACGTCAAGCGTACCGATGGCCTTACGGTGCTCTGCATGGCCGATGACACTGCCGGAAGTGAGTATTGTCTCGTTAATGAGGATTGGAGGTATCGATGCGTTGTGCAATTGAGTACTGGTGCTAATTATTGGATAGTTTTTTTCTTTTTTTTTTGTTTTAGATGGCCAATGCTAATTATTTAACACTGTATAGTCGGATCATTTAGTTGCATATCACAGCATATCGTTGATTTCTAAAATTGGCGGGAGACCGAGAATAGAGCCCTCTAGTTCTAAGACGGGGAGTAGGCAGATGTGCGTTGCTATGTTAACTTTAATGATGGGTTATTTCATAGACTATGCGTCGTTCTTCAAGATATCTGTTGATTTAGTAGTTTCGGTTCTTCACTGTTTGTTGTTTGCATATTGCTGGATCTGTGTGGATAGTCGATGGAGTTTGGATGGCATTTGTGTATCTATATTGAACCTGGATGATATTTTCCGTGATTTTCAATTCATTTACGTAACATCAAAATGGTTAGCGTGAGGATGCTTGCTGCTTTGTAAAATATACCGCCATGAAGAATAAAATGTTTATCAATCTTAGTCGGCTTCGTCCCACCGACAAGTGAAGCCAATCATATAATAATCTTTCTGCTGCAAGTCATCTTTGAAACCCAACTCGTTCACACAGTAAAATCAGGCAACGAATTTTTAGTTGTACTGACAATGACAACCCATATTCTTCAGGGAGGATTCCTTTTGCATTCCTGGAAGATATTCATCAGAGATTTGTAAGGACATATGGCCGTGCAGTTCATTCAGCCAATCCTTATGGCATGAACGACGAATTCTCAAGAGTTTTGAGTCAGCAAATGGAATACTACTCCAATGACCCAAGCGCCGATAGGATCAACCGGCTGAAAGGTGAAATGAGTCAGGTGATTATCAAAATACTTCAAGGTTTTATTTACATAATCTTATGCCGTGCAAAATATCTTAAAGCAGCTATTTCGCTCTTAACATTTCACTTAATCTAGGATGTATGCGCATTATATAGAATGATGCAGACTGTGAGAATGTTTTTTTTTTAGTTTGTTGCAGTTCTATTACTTACTGGTGGCCGTTTAGGTGTGCACTTCCAGTGCCTTATTCTAGTTTTCCATCATCAATATACTGCCACTTTGTTATCAGACACGAAATATTATTATACTTCTTACCAGACTCAGCATAATATTACATATAATTTACAAAATTCATCTCAATAATATAAAAAAAAAAGTAGCTTATGTTACTAGAGGGAAGAACAAATTCACCCGAAGAAGTATTCTGAAAATATTGTTCATGAAGAAAAAAATGACAGAGAAAGCCCTGGCGTTCTAATACATAGATAATAGTCTGCTTTGGGATATCATATAAACTTTCACCATAAATTTTTTGCTTCTTTGTTGTGCAACTAGCACATAGTATCGATAACCAATAGTTATTATGTTTTACAGGTGAGAAATGTCATGATAGAGAATATTGACAAAGTTTTAGAGAGAGGTGACCGATTGGAGCTGCTTGTGGATAAAACTACTAATATGCAAGGAAACACCATGCGATTTAGGAAGCAGTCTCGACGTTTCAGAAACACAGTATGGTGGAAAAATGTTAAGCTCATGTATGTTTCCTCCCCTTCTAAAAAATTATTTTTCCATCAGTACTAATGGTACACTCAGTGTGAGATTGTTGGTGCATTTTCATATTATGTCTGCAATTTGTGATTGAAAATTTAATTATGAAAAACATGTAAAAGATCCTCGCTAGTCCAATAGGGTCAAGCCCATATTGTCTATGTATTTTAGGAAAATGATTTAGGTATTTTAGAAATAAAAATACCTAAATATTTTAGACAATTATTTAGAAATAAATTGTCTACCTCTCCTATAAATACCCCTTCACCCCACCAAGGTTTTCATCCCAACAAATTTGAAGAGCAAAGCAAAATGTAGCAGTATTCTACAACGTGTCTTGAAATCTTTTCTCGATTGGTCTTAATAAAGAGTGCAACTGTTTTCCATAATTAACAAAAACATGTTTGCCTTTAGCGGCTAAATGTTTCCTTGTATGCTTTTCAGTTTCTGCATTTTCGTTCTTAGCGGCTAAACATTTCCTTGTATGCTTTTCAGTTTGTGCACCTTTTGCTCCTAGAAGTTTCGTGTAGAAAGCCTCTCAATGTCTTAAAGATGATGATATTCTGCACCCTGCTGATTAAATGAATGCCTCAAATCTTGCAGGTTAATGCTGATAGTACTCCTCCTAGTGATTGCATACTTGGTGCTAGCTTATGTTTGCCATGGAGTGACACTACCTAAGTGCCTATAATGAGAACAATTTGACATGTGATTATACGTAGTTCGGGTTGCTCCCTCCTGTTTTCTGTGATTTCCACCGGTGTACACTGCTCGTACACTAATTTATACGATTTGATAAACTCAGCTTGTCTGGGTGCTGATGATTTGGATTATACATGTTCATCTTCAGAAGGCATGGCTTTGGTTGGACACTGTAAGTAAATTCTTAAGGTGAATTCGTAATTTTTTCATACCAGCGTGAAGCTTTAGCTTTGTTGTCCATTACGAAATCCAGGTCTCTTCTGACCATATTTGGCATCTTTTGACAGCCAAGTGTTATACAGCGCTTTGCTGAAAAAACTCCTTGTGCTTATTTTGCATTAGCAACTTCAAAACGAGACTATTATTAATATTCTTTAAAAGGATAATTATTTTATAATTCTTTGTGATATAGTTGTATGATTTTCCATTTTCT TTTTAAGCTCATTCCCGCTTTGTGTTTGCAATGTTGATTTTTAGAAACCTAATTTCAAATTTCTCGCTCTCCAATGATCTTCGACGCCCGAATCTCAAACTGGTGATGAGAGAATCAAGATCCTGATCTTCCATAACGTACCGGCTGCTTCAGCTCTATTGATCGGCGTGCTTCTTGCAGTCGATTTTATCTTGAATCGACCGATTTGATCTTCGTTCTCATGGCGATAATCTATGCGCTGGTGGCGAGGGGGTCGGTGGTTTTGGCTGAATTTTATGTAACTCCGACGAATGCAAGCTCGATTTCTCGCCAAATACTCGATAAAATTCCGGGAAACGATGATTCTCATGTTTCCTACTCGCAGGATCGGTATATCTTTCACGTCAAGCGTACCGATGGCCTTACGGTGCTCTGCATGGCCGATGACACTGCCGGAAGGAGGATTCCTTTTGCATTCCTGGAAGATATTCATCAGAGATTTGTAAGGACATATGGCCGTGCAGTTCATTCAGCCAATCCTTATGGCATGAACGACGAATTCTCAAGAGTTTTGAGTCAGCAAATGGAATACTACTCCAATGACCCAAGCGCCGATAGGATCAACCGGCTGAAAGGTGAAATGAGTCAGGTGAGAAATGTCATGATAGAGAATATTGACAAAGTTTTAGAGAGAGGTGACCGATTGGAGCTGCTTGTGGATAAAACTACTAATATGCAAGGAAACACCATGCGATTTAGGAAGCAGTCTCGACGTTTCAGAAACACAGTATGGTGGAAAAATGTTAAGCTCATGTTAATGCTGATAGTACTCCTCCTAGTGATTGCATACTTGGTGCTAGCTTATGTTTGCCATGGAGTGACACTACCTAAGTGCCTATAATGAGAACAATTTGACATGTGATTATACGTAGTTCGGGTTGCTCCCTCCTGTTTTCTGTGATTTCCACCGGTGTACACTGCTCGTACACTAATTTATACGATTTGATAAACTCAGCTTGTCTGGGTGCTGATGATTTGGATTATACATGTTCATCTTCAGAAGGCATGGCTTTGGTTGGACACTGTAAGTAAATTCTTAAGGTGAATTCGTAATTTTTTCATACCAGCGTGAAGCTTTAGCTTTGTTGTCCATTACGAAATCCAGGTCTCTTCTGACCATATTTGGCATCTTTTGACAGCCAAGTGTTATACAGCGCTTTGCTGAAAAAACTCCTTGTGCTTATTTTGCATTAGCAACTTCAAAACGAGACTATTATTAATATTCTTTAAAAGGATAATTATTTTATAATTCTTTGTGATATAGTTGTATGATTTTCCATTTTCT ATGGCGATAATCTATGCGCTGGTGGCGAGGGGGTCGGTGGTTTTGGCTGAATTTTATGTAACTCCGACGAATGCAAGCTCGATTTCTCGCCAAATACTCGATAAAATTCCGGGAAACGATGATTCTCATGTTTCCTACTCGCAGGATCGGTATATCTTTCACGTCAAGCGTACCGATGGCCTTACGGTGCTCTGCATGGCCGATGACACTGCCGGAAGGAGGATTCCTTTTGCATTCCTGGAAGATATTCATCAGAGATTTGTAAGGACATATGGCCGTGCAGTTCATTCAGCCAATCCTTATGGCATGAACGACGAATTCTCAAGAGTTTTGAGTCAGCAAATGGAATACTACTCCAATGACCCAAGCGCCGATAGGATCAACCGGCTGAAAGGTGAAATGAGTCAGGTGAGAAATGTCATGATAGAGAATATTGACAAAGTTTTAGAGAGAGGTGACCGATTGGAGCTGCTTGTGGATAAAACTACTAATATGCAAGGAAACACCATGCGATTTAGGAAGCAGTCTCGACGTTTCAGAAACACAGTATGGTGGAAAAATGTTAAGCTCATGTTAATGCTGATAGTACTCCTCCTAGTGATTGCATACTTGGTGCTAGCTTATGTTTGCCATGGAGTGACACTACCTAAGTGCCTATAA MAIIYALVARGSVVLAEFYVTPTNASSISRQILDKIPGNDDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVRTYGRAVHSANPYGMNDEFSRVLSQQMEYYSNDPSADRINRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTTNMQGNTMRFRKQSRRFRNTVWWKNVKLMLMLIVLLLVIAYLVLAYVCHGVTLPKCL Homology
BLAST of CmoCh09G004550 vs. ExPASy Swiss-Prot
Match: O49377 (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana OX=3702 GN=VAMP711 PE=1 SV=2) HSP 1 Score: 346.7 bits (888), Expect = 2.0e-94 Identity = 169/219 (77.17%), Postives = 203/219 (92.69%), Query Frame = 0
BLAST of CmoCh09G004550 vs. ExPASy Swiss-Prot
Match: Q9LFP1 (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana OX=3702 GN=VAMP713 PE=1 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 9.7e-94 Identity = 169/219 (77.17%), Postives = 200/219 (91.32%), Query Frame = 0
BLAST of CmoCh09G004550 vs. ExPASy Swiss-Prot
Match: Q9SIQ9 (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana OX=3702 GN=VAMP712 PE=2 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 1.3e-93 Identity = 168/219 (76.71%), Postives = 198/219 (90.41%), Query Frame = 0
BLAST of CmoCh09G004550 vs. ExPASy Swiss-Prot
Match: Q9FMR5 (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana OX=3702 GN=VAMP714 PE=1 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.4e-68 Identity = 122/219 (55.71%), Postives = 173/219 (79.00%), Query Frame = 0
BLAST of CmoCh09G004550 vs. ExPASy Swiss-Prot
Match: Q86AQ7 (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum OX=44689 GN=vamp7B PE=3 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 7.6e-46 Identity = 97/213 (45.54%), Postives = 147/213 (69.01%), Query Frame = 0
BLAST of CmoCh09G004550 vs. ExPASy TrEMBL
Match: A0A6J1FBF4 (vesicle-associated membrane protein 711-like OS=Cucurbita moschata OX=3662 GN=LOC111442591 PE=3 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 7.2e-116 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of CmoCh09G004550 vs. ExPASy TrEMBL
Match: A0A6J1IIT7 (vesicle-associated membrane protein 711-like OS=Cucurbita maxima OX=3661 GN=LOC111476658 PE=3 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 6.7e-114 Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 0
BLAST of CmoCh09G004550 vs. ExPASy TrEMBL
Match: A0A0A0LH93 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G876590 PE=3 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110 Identity = 208/219 (94.98%), Postives = 215/219 (98.17%), Query Frame = 0
BLAST of CmoCh09G004550 vs. ExPASy TrEMBL
Match: A0A6J1J3R6 (vesicle-associated membrane protein 711-like OS=Cucurbita maxima OX=3661 GN=LOC111481064 PE=3 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110 Identity = 208/219 (94.98%), Postives = 215/219 (98.17%), Query Frame = 0
BLAST of CmoCh09G004550 vs. ExPASy TrEMBL
Match: A0A6J1FKX1 (vesicle-associated membrane protein 711-like OS=Cucurbita moschata OX=3662 GN=LOC111446678 PE=3 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 2.0e-110 Identity = 208/219 (94.98%), Postives = 215/219 (98.17%), Query Frame = 0
BLAST of CmoCh09G004550 vs. NCBI nr
Match: XP_022935768.1 (vesicle-associated membrane protein 711-like [Cucurbita moschata]) HSP 1 Score: 426.4 bits (1095), Expect = 1.5e-115 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of CmoCh09G004550 vs. NCBI nr
Match: KAG7024451.1 (Vesicle-associated membrane protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 425.2 bits (1092), Expect = 3.3e-115 Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of CmoCh09G004550 vs. NCBI nr
Match: XP_023534904.1 (vesicle-associated membrane protein 711-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 422.2 bits (1084), Expect = 2.8e-114 Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0
BLAST of CmoCh09G004550 vs. NCBI nr
Match: XP_022976195.1 (vesicle-associated membrane protein 711-like [Cucurbita maxima]) HSP 1 Score: 419.9 bits (1078), Expect = 1.4e-113 Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 0
BLAST of CmoCh09G004550 vs. NCBI nr
Match: XP_023524367.1 (vesicle-associated membrane protein 711-like [Cucurbita pepo subsp. pepo] >KAG6608162.1 Vesicle-associated membrane protein 713, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110 Identity = 209/219 (95.43%), Postives = 215/219 (98.17%), Query Frame = 0
BLAST of CmoCh09G004550 vs. TAIR 10
Match: AT4G32150.1 (vesicle-associated membrane protein 711 ) HSP 1 Score: 346.7 bits (888), Expect = 1.4e-95 Identity = 169/219 (77.17%), Postives = 203/219 (92.69%), Query Frame = 0
BLAST of CmoCh09G004550 vs. TAIR 10
Match: AT5G11150.1 (vesicle-associated membrane protein 713 ) HSP 1 Score: 344.4 bits (882), Expect = 6.9e-95 Identity = 169/219 (77.17%), Postives = 200/219 (91.32%), Query Frame = 0
BLAST of CmoCh09G004550 vs. TAIR 10
Match: AT2G25340.1 (vesicle-associated membrane protein 712 ) HSP 1 Score: 344.0 bits (881), Expect = 9.0e-95 Identity = 168/219 (76.71%), Postives = 198/219 (90.41%), Query Frame = 0
BLAST of CmoCh09G004550 vs. TAIR 10
Match: AT5G22360.1 (vesicle-associated membrane protein 714 ) HSP 1 Score: 260.0 bits (663), Expect = 1.7e-69 Identity = 122/219 (55.71%), Postives = 173/219 (79.00%), Query Frame = 0
BLAST of CmoCh09G004550 vs. TAIR 10
Match: AT1G04750.1 (vesicle-associated membrane protein 721 ) HSP 1 Score: 140.6 bits (353), Expect = 1.5e-33 Identity = 76/213 (35.68%), Postives = 134/213 (62.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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