CmoCh08G004870 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G004870
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Autophagy-related protein
Location	Cmo_Chr08: 2997910 .. 2999986 (-)
RNA-Seq Expression	CmoCh08G004870
Synteny	CmoCh08G004870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAGAGAGCTCTGATGGGTAAAGCCAAATCCTTCAAGAACGAGTTCTCCTATGGTATGAACCTTTTTATGGCTTAAAATTCAGGATGATTTTCGTTATTTTTCATCAATTTGCCTCTTAGTTTGATACGTTTGGAGATCCTTATTGAATCATGGCGTTGAATTTTTCGTAGAACAACGATCGGAGGAGTCGTTCGAAATCTTGATCAAGTATCCGGATCGAGTCCCCGTAAGTTGCCAAATTCTCACATTATGCGCTTCTTATTTGAGAAGATTCGTATTGTTGCATTTTGTTTAGAAATTATAGATGTTGGTGAATTTATGAATTTGGTGGAAATAGGTAACTCAGAAAGTCTGCAGGTGTCCAATCCTTAGGCTTTTATCTTTGTTTCCTCTTGGTTGAAGCGTTATCGTTATGATTTTTTGTTTTTTTTCTTAGAGATTGTTCGCGCAATTTGCCATGGGGGATGCTTTTCAGATAAATTCTTCAGGAAATGAAATGCTGAAGTTATCAGATGATTTTAGTCAATGTTTTCTTTGTTATCTAAGAACAAAATTGTATCCGGATTTTTTTTCAACTCGTGGATAGAAGCTGCTTGTTCTTTGTATCAAGCGATACCAAGGCGATTTCAAGTTTGGTAGGCTTGGACAGAGCTATATAGAAGGAAGCAAATCACTATTTTTGTTTCCTAAAAAACAATATCACTGAAGTTAATGTGCAGACTCAATTATGTGACGTTCTTATATTTTTGAGGTGTAAATGCTAGATTGCTGTTCTTCATTTCCTCCAAATCCATGAAAGTGATTTAATGGTTTTCCTTTTGATGTTCTTTCTGAGTATAATTGCAGGTAATTGTCGAGAGATATGAGAAATGTGAACTTCCTGAGATGGAAAAGAAGAAGTAAGTTCTTCCTGCATATCTAAGCTTCCTCAATGTTTCAGTTCTCCTAATTTCATGTACCTCTCTCTGAAAATCAATTGAATGGAAACAGACACTATCACCTTTGCATTACACTCTTAACATGTTTATGTTTGTTCTTGTTAATGTTTGAGAAACCATTTTTGGGTACTGGCTCCGATCGTAAGCGTCGAATTTCAATGTTCCTCACAAAATTGTCAAAAAATTATCGATTGTGACTCAGTTTTTTTTCAAACGGCCCAATCAAAGTTTCCAAATTAGGGTCTCGGTTTTAACCCTGTACATATGGTGCTATAGGCTCTCTTTCTTCCTATCACATGATCATCCTCCCCCGAAAAAAAAACATCATGGTATTTATTTATTCACATTTGGGAATTAAAACATAGTCTCACATAATGTCTTACACGTTCTATTCCAACATTTTCTCGTCTCGTTAGATACGATTTTCATTGAATTTCTGCAGAACTATGGGATCTGAACAGGGGTTTTGTACATGTTGCCTAGGTTTACATTTGAAAGCCAGTTGTGATCCTAAAATAACATGACATATTGTGTCTATTAGGTTTGGTTTGTCTGTTGAATGTCTTTTGTTTTGTTATTGACTAAAGGTACCTGATTCCTCGAGACATGTCTGTTGGCCAATTCATCCATGTCCTGAGCACCAGGCTTCGTCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGGTAGGGTTAGGACATAGGATTACATTTGAGATGATGCTGCTGCCCATTTTTACGTGCATTCTCGTGCAACAAGTCGTTTTAATCCTAAACAGTTGCCCTCAAATTTTGCAGCTAGCTTAATGAGTACCGCGTACGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAAGGTAATAATCTGATTGAGATTTGTGAATGCTGAAGTTGTTGTATACTTTCTGCTGCTCCTCCTGTTGTGAGTATTATATTCCATGAACAAATTTGTTCTTACCATGTAGACATTATTATGTATAATGTGTAAATCATTTAATATTGTAACGGCCTAAGCCTACTGCTAGTAGATATTGTCCTCTTTGGCCTTTCTCTTTTGGACTTCCCCTCAAGGTTTTTAAAACGCGTC

mRNA sequence

AACAGAGAGCTCTGATGGGTAAAGCCAAATCCTTCAAGAACGAGTTCTCCTATGAACAACGATCGGAGGAGTCGTTCGAAATCTTGATCAAGTATCCGGATCGAGTCCCCGTAATTGTCGAGAGATATGAGAAATGTGAACTTCCTGAGATGGAAAAGAAGAAGTACCTGATTCCTCGAGACATGTCTGTTGGCCAATTCATCCATGTCCTGAGCACCAGGCTTCGTCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGCTAGCTTAATGAGTACCGCGTACGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAAGGTAATAATCTGATTGAGATTTGTGAATGCTGAAGTTGTTGTATACTTTCTGCTGCTCCTCCTGTTGTGAGTATTATATTCCATGAACAAATTTGTTCTTACCATGTAGACATTATTATGTATAATGTGTAAATCATTTAATATTGTAACGGCCTAAGCCTACTGCTAGTAGATATTGTCCTCTTTGGCCTTTCTCTTTTGGACTTCCCCTCAAGGTTTTTAAAACGCGTC

Coding sequence (CDS)

ATGGGTAAAGCCAAATCCTTCAAGAACGAGTTCTCCTATGAACAACGATCGGAGGAGTCGTTCGAAATCTTGATCAAGTATCCGGATCGAGTCCCCGTAATTGTCGAGAGATATGAGAAATGTGAACTTCCTGAGATGGAAAAGAAGAAGTACCTGATTCCTCGAGACATGTCTGTTGGCCAATTCATCCATGTCCTGAGCACCAGGCTTCGTCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGCTAGCTTAATGAGTACCGCGTACGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAA

Protein sequence

MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG

Homology

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BLAST of CmoCh08G004870 vs. ExPASy Swiss-Prot
Match: Q9LRP7 (Autophagy-related protein 8i OS=Arabidopsis thaliana OX=3702 GN=ATG8I PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-41
Identity = 80/114 (70.18%), Postives = 98/114 (85.96%), Query Frame = 0


Query: 5   KSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIH 64
           KSFK +++ ++R  ES EI+ KYP R+PVI E+Y K +LP +EKKK+L+PRDMSVGQFI+
Sbjct: 2   KSFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIY 61

Query: 65  VLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           +LS RL L+PGKALFVFV NTLPQTA+LM + YESYKDDDGF+YMCYSSEKTFG
Sbjct: 62  ILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115

[Close]

BLAST of CmoCh08G004870 vs. ExPASy Swiss-Prot
Match: Q8S925 (Autophagy-related protein 8h OS=Arabidopsis thaliana OX=3702 GN=ATG8H PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-39
Identity = 74/114 (64.91%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 5   KSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIH 64
           KSFK++FS ++R +ES  I+ KYPDR+PVI+E+Y   +LP+MEK KYL+PRDM+VG FIH
Sbjct: 6   KSFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIH 65

Query: 65  VLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           +LS R++L P KALFVFV NTLPQTAS M + Y ++K++DGFLYMCYS+EKTFG
Sbjct: 66  MLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119

[Close]

BLAST of CmoCh08G004870 vs. ExPASy Swiss-Prot
Match: Q2RBS4 (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8D PE=3 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 9.1e-38
Identity = 75/117 (64.10%), Postives = 95/117 (81.20%), Query Frame = 0


Query: 3   KAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQF 62
           K + FK EF+ E+R++ES  ++  YPDR+PVIVE++ +  LPEMEK+KYL+P +M VGQF
Sbjct: 2   KPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQF 61

Query: 63  IHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDD-DGFLYMCYSSEKTFG 119
           I +L +RL L+PG ALFVFV NTLPQTA LM + YESYKD+ DGFLY+CYSSEKTFG
Sbjct: 62  IFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118

[Close]

BLAST of CmoCh08G004870 vs. ExPASy Swiss-Prot
Match: Q9SL04 (Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-33
Identity = 65/113 (57.52%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 6   SFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIHV 65
           SFK+E   E+R  E+  I  KYPDR+PVIVER EK ++P++++KKYL+P D++VGQF++V
Sbjct: 5   SFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYV 64

Query: 66  LSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           +  R++L+P KA+F+FVKN LP TA++MS  YE +KD+DGFLYM YS E TFG
Sbjct: 65  VRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of CmoCh08G004870 vs. ExPASy Swiss-Prot
Match: Q2XPP5 (Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-33
Identity = 69/113 (61.06%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 6   SFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIHV 65
           SFK E   E+R  ES  I  KY DR+PVIVE+ +K ++PE++KKKYL+P D++VGQF++V
Sbjct: 5   SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYV 64

Query: 66  LSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           +  R++L+P KA+FVFVKNTLP TASLMS  YE  KD+DGFLYM YS E TFG
Sbjct: 65  VRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of CmoCh08G004870 vs. ExPASy TrEMBL
Match: A0A6J1H7R2 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111461254 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.4e-59
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of CmoCh08G004870 vs. ExPASy TrEMBL
Match: A0A6J1L0B7 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111497916 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.8e-57
Identity = 115/118 (97.46%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKAKSFKNEFSYEQR EESFEILIKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRLEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMST YESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of CmoCh08G004870 vs. ExPASy TrEMBL
Match: A0A6J1GQC4 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111456510 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.2e-54
Identity = 109/118 (92.37%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGK KSFK+EF+YEQR  ESFEIL KYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRL LAPGKALFVFVKNTLPQTASLM T YESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of CmoCh08G004870 vs. ExPASy TrEMBL
Match: A0A6J1CW54 (Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111014838 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.5e-54
Identity = 107/118 (90.68%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGK+KSFKNEF+YEQR EE+FEIL KYPDRVPVIVERY+KCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLS RL LAPGKALFVFVKNTLPQTASLMS+ YESYKDDDGFLYMCYS+EKTFG
Sbjct: 61  QFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDDGFLYMCYSTEKTFG 118

[Close]

BLAST of CmoCh08G004870 vs. ExPASy TrEMBL
Match: A0A5D3CGI6 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00040 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 9.4e-54
Identity = 107/118 (90.68%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MG+ KSFK+EF+YEQR EESFE+L KYPDRVPVIVERY KCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGRTKSFKDEFTYEQRFEESFEVLAKYPDRVPVIVERYGKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFV NTLPQTASLMST Y+SYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVNNTLPQTASLMSTVYDSYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of CmoCh08G004870 vs. NCBI nr
Match: XP_022960552.1 (autophagy-related protein 8i-like [Cucurbita moschata])

HSP 1 Score: 236.9 bits (603), Expect = 9.0e-59
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of CmoCh08G004870 vs. NCBI nr
Match: KAG6593267.1 (Autophagy-related protein 8i, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.3 bits (599), Expect = 2.6e-58
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMST YESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of CmoCh08G004870 vs. NCBI nr
Match: KAG7025617.1 (Autophagy-related protein 8i [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 234.6 bits (597), Expect = 4.5e-58
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTR+RLAPGKALFVFVKNTLPQTASLMST YESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRIRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of CmoCh08G004870 vs. NCBI nr
Match: XP_023004698.1 (autophagy-related protein 8i-like [Cucurbita maxima])

HSP 1 Score: 231.5 bits (589), Expect = 3.8e-57
Identity = 115/118 (97.46%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKAKSFKNEFSYEQR EESFEILIKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRLEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMST YESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of CmoCh08G004870 vs. NCBI nr
Match: XP_023513717.1 (autophagy-related protein 8i-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.1 bits (588), Expect = 4.9e-57
Identity = 115/118 (97.46%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKAKSFKNEFSY QRSEESFEILIKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMST YESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of CmoCh08G004870 vs. TAIR 10
Match: AT3G15580.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 170.6 bits (431), Expect = 7.4e-43
Identity = 80/114 (70.18%), Postives = 98/114 (85.96%), Query Frame = 0


Query: 5   KSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIH 64
           KSFK +++ ++R  ES EI+ KYP R+PVI E+Y K +LP +EKKK+L+PRDMSVGQFI+
Sbjct: 2   KSFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIY 61

Query: 65  VLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           +LS RL L+PGKALFVFV NTLPQTA+LM + YESYKDDDGF+YMCYSSEKTFG
Sbjct: 62  ILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115

[Close]

BLAST of CmoCh08G004870 vs. TAIR 10
Match: AT3G06420.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 2.0e-40
Identity = 74/114 (64.91%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 5   KSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIH 64
           KSFK++FS ++R +ES  I+ KYPDR+PVI+E+Y   +LP+MEK KYL+PRDM+VG FIH
Sbjct: 6   KSFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIH 65

Query: 65  VLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           +LS R++L P KALFVFV NTLPQTAS M + Y ++K++DGFLYMCYS+EKTFG
Sbjct: 66  MLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119

[Close]

BLAST of CmoCh08G004870 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-34
Identity = 65/113 (57.52%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 6   SFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIHV 65
           SFK+E   E+R  E+  I  KYPDR+PVIVER EK ++P++++KKYL+P D++VGQF++V
Sbjct: 5   SFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYV 64

Query: 66  LSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           +  R++L+P KA+F+FVKN LP TA++MS  YE +KD+DGFLYM YS E TFG
Sbjct: 65  VRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of CmoCh08G004870 vs. TAIR 10
Match: AT1G62040.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 4.1e-33
Identity = 66/113 (58.41%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 6   SFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIHV 65
           SFK E   E+R  ES  I  KYPDR+PVIVER E+ ++P ++KKKYL+P D++VGQF++V
Sbjct: 5   SFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYV 64

Query: 66  LSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           +  R++L+  KA+FVFVKNTLP TA++MS  Y+  KD+DGFLYM YS E TFG
Sbjct: 65  VRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of CmoCh08G004870 vs. TAIR 10
Match: AT1G62040.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 4.1e-33
Identity = 66/113 (58.41%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 6   SFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIHV 65
           SFK E   E+R  ES  I  KYPDR+PVIVER E+ ++P ++KKKYL+P D++VGQF++V
Sbjct: 19  SFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYV 78

Query: 66  LSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 119
           +  R++L+  KA+FVFVKNTLP TA++MS  Y+  KD+DGFLYM YS E TFG
Sbjct: 79  VRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 131

The following BLAST results are available for this feature:

BLAST of CmoCh08G004870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRP7	1.0e-41	70.18	Autophagy-related protein 8i OS=Arabidopsis thaliana OX=3702 GN=ATG8I PE=1 SV=1	[more]
Q8S925	2.8e-39	64.91	Autophagy-related protein 8h OS=Arabidopsis thaliana OX=3702 GN=ATG8H PE=1 SV=1	[more]
Q2RBS4	9.1e-38	64.10	Autophagy-related protein 8D OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8D P...	[more]
Q9SL04	1.8e-33	57.52	Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1	[more]
Q2XPP5	2.3e-33	61.06	Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=...	[more]

BLAST of CmoCh08G004870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7R2	4.4e-59	100.00	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111461254 PE=3 SV=...	[more]
A0A6J1L0B7	1.8e-57	97.46	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111497916 PE=3 SV=1	[more]
A0A6J1GQC4	3.2e-54	92.37	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111456510 PE=3 SV=...	[more]
A0A6J1CW54	5.5e-54	90.68	Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111014838 PE=3 SV...	[more]
A0A5D3CGI6	9.4e-54	90.68	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of CmoCh08G004870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960552.1	9.0e-59	100.00	autophagy-related protein 8i-like [Cucurbita moschata]	[more]
KAG6593267.1	2.6e-58	99.15	Autophagy-related protein 8i, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7025617.1	4.5e-58	98.31	Autophagy-related protein 8i [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023004698.1	3.8e-57	97.46	autophagy-related protein 8i-like [Cucurbita maxima]	[more]
XP_023513717.1	4.9e-57	97.46	autophagy-related protein 8i-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh08G004870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15580.1	7.4e-43	70.18	Ubiquitin-like superfamily protein	[more]
AT3G06420.1	2.0e-40	64.91	Ubiquitin-like superfamily protein	[more]
AT2G05630.1	1.3e-34	57.52	Ubiquitin-like superfamily protein	[more]
AT1G62040.1	4.1e-33	58.41	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	4.1e-33	58.41	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 15..118 e-value: 4.8E-43 score: 145.6
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..118
None	No IPR available	GENE3D	3.10.20.90		coord: 1..118 e-value: 7.3E-49 score: 166.8
None	No IPR available	PANTHER	PTHR10969:SF81	AUTOPHAGY-RELATED PROTEIN	coord: 1..118
None	No IPR available	CDD	cd16108	Ubl_ATG8_like	coord: 29..113 e-value: 1.14178E-46 score: 143.103
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 5..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G004870.1	CmoCh08G004870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule