CmoCh08G002640 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAACAAATTGGTCTACTACCGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACAAGGGGGACTCAACCGTCTTCTGAAAGGGATGCTGCTATGTTGAAGAGACAATTATCTCACTTCCAAACATATCTGGGCTGGATTACCCGGTATTGTAATAATCGTTGATCAACAAGAAGAATATCAGGCTCTTCAAGGATGTATCACGTTCGAAATTCCAACTATTTGTTTAATAGATACAAATTGTGACCCAGATCTCGAATATTTTGATTCCAACATTATCCAGTGCTTCCAAAATGGACTTTCTTCCTTCTCTTCAATAAAATCTCGAGTCGATAAATAA ATGTTAACAAATTGGTCTACTACCGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACAAGGGGGACTCAACCGTCTTCTGAAAGGGATGCTGCTATAGACAATTATCTCACTTCCAAACATATCTGGGCTGGATTACCCGGTATTGTAATAATCGTTGATCAACAAGAAGAATATCAGGCTCTTCAAGGATGTATCACGTTCGAAATTCCAACTATTTGTTTAATAGATACAAATTGTGACCCAGATCTCGAATATTTTGATTCCAACATTATCCAGTGCTTCCAAAATGGACTTTCTTCCTTCTCTTCAATAAAATCTCGAGTCGATAAATAA ATGTTAACAAATTGGTCTACTACCGAAACGAGACTTCATAAGTTCAGGGACTTGAGAACGGAACAAAAGACAAGGGGGACTCAACCGTCTTCTGAAAGGGATGCTGCTATAGACAATTATCTCACTTCCAAACATATCTGGGCTGGATTACCCGGTATTGTAATAATCGTTGATCAACAAGAAGAATATCAGGCTCTTCAAGGATGTATCACGTTCGAAATTCCAACTATTTGTTTAATAGATACAAATTGTGACCCAGATCTCGAATATTTTGATTCCAACATTATCCAGTGCTTCCAAAATGGACTTTCTTCCTTCTCTTCAATAAAATCTCGAGTCGATAAATAA MLTNWSTTETRLHKFRDLRTEQKTRGTQPSSERDAAIDNYLTSKHIWAGLPGIVIIVDQQEEYQALQGCITFEIPTICLIDTNCDPDLEYFDSNIIQCFQNGLSSFSSIKSRVDK Homology
BLAST of CmoCh08G002640 vs. ExPASy Swiss-Prot
Match: Q4VZP4 (30S ribosomal protein S2, chloroplastic OS=Cucumis sativus OX=3659 GN=rps2 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 4.9e-28 Identity = 66/96 (68.75%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh08G002640 vs. ExPASy Swiss-Prot
Match: Q1KXW9 (30S ribosomal protein S2, chloroplastic OS=Helianthus annuus OX=4232 GN=rps2 PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 3.2e-27 Identity = 65/96 (67.71%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of CmoCh08G002640 vs. ExPASy Swiss-Prot
Match: Q56P10 (30S ribosomal protein S2, chloroplastic OS=Lactuca sativa OX=4236 GN=rps2 PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 3.2e-27 Identity = 65/96 (67.71%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of CmoCh08G002640 vs. ExPASy Swiss-Prot
Match: B2LMI3 (30S ribosomal protein S2, chloroplastic OS=Guizotia abyssinica OX=4230 GN=rps2 PE=3 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.2e-26 Identity = 64/96 (66.67%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of CmoCh08G002640 vs. ExPASy Swiss-Prot
Match: Q09X28 (30S ribosomal protein S2, chloroplastic OS=Morus indica OX=248361 GN=rps2 PE=3 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.2e-26 Identity = 64/96 (66.67%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of CmoCh08G002640 vs. ExPASy TrEMBL
Match: A0A218KG32 (30S ribosomal protein S2, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rps2 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.8e-25 Identity = 66/96 (68.75%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh08G002640 vs. ExPASy TrEMBL
Match: A0A1X9Q1S8 (30S ribosomal protein S2, chloroplastic OS=Cucumis sativus OX=3659 GN=rps2 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.8e-25 Identity = 66/96 (68.75%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh08G002640 vs. ExPASy TrEMBL
Match: A0A249RZA5 (30S ribosomal protein S2, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rps2 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.8e-25 Identity = 66/96 (68.75%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh08G002640 vs. ExPASy TrEMBL
Match: A0A1P8LE54 (Ribosomal protein S2 OS=Citrullus mucosospermus OX=519315 GN=rps2 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.8e-25 Identity = 66/96 (68.75%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh08G002640 vs. ExPASy TrEMBL
Match: A0A2Z2CQF0 (30S ribosomal protein S2, chloroplastic OS=Coccinia grandis OX=387127 GN=rps2 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.8e-25 Identity = 66/96 (68.75%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh08G002640 vs. NCBI nr
Match: QJS52344.1 (ribosomal protein S2 [Indofevillea khasiana]) HSP 1 Score: 125.2 bits (313), Expect = 3.7e-25 Identity = 66/96 (68.75%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh08G002640 vs. NCBI nr
Match: AHM88761.1 (ribosomal protein S2, partial [Lagenaria siceraria]) HSP 1 Score: 125.2 bits (313), Expect = 3.7e-25 Identity = 66/96 (68.75%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh08G002640 vs. NCBI nr
Match: YP_009674380.1 (ribosomal protein S2 [Siraitia grosvenorii] >QDK59378.1 ribosomal protein S2 [Siraitia grosvenorii] >QDK99936.1 ribosomal protein S2 [Siraitia grosvenorii] >QIB71494.1 ribosomal protein S2 [Siraitia grosvenorii] >QJA16133.1 ribosomal protein S2 [Siraitia grosvenorii]) HSP 1 Score: 125.2 bits (313), Expect = 3.7e-25 Identity = 66/96 (68.75%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh08G002640 vs. NCBI nr
Match: YP_009751474.1 (ribosomal protein S2 [Thladiantha dubia] >QIT03955.1 ribosomal protein S2 [Thladiantha dubia]) HSP 1 Score: 125.2 bits (313), Expect = 3.7e-25 Identity = 66/96 (68.75%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh08G002640 vs. NCBI nr
Match: YP_009752064.1 (ribosomal protein S2 [Dendrosicyos socotranus] >QIT05474.1 ribosomal protein S2 [Dendrosicyos socotranus]) HSP 1 Score: 125.2 bits (313), Expect = 3.7e-25 Identity = 66/96 (68.75%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of CmoCh08G002640 vs. TAIR 10
Match: ATCG00160.1 (ribosomal protein S2 ) HSP 1 Score: 115.2 bits (287), Expect = 3.6e-26 Identity = 61/96 (63.54%), Postives = 67/96 (69.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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