CmoCh06G012120 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G012120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr06: 9233501 .. 9234439 (+)
RNA-Seq Expression	CmoCh06G012120
Synteny	CmoCh06G012120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTGCAAGAAGCACCAGTTTGACTGCAGCAGTAGCATCGGCGTCTGTGCTTCCTGTTTACGGGAGCGTCTTTTTTTGATTATCGCTGCTCAGGCACAAGCGGAGAAGCAATCGGAGATCCGTGCCGCCGCTGCCGGTGATAATCGTGCGGCGGACGATAGACCTCTTCCGCCACCGCCGCTTGTTTTTCTTCGTTCTGTTTCTCCTTTTGATCATCGTTTGAAATCGGATGAAGGTTTGTTGAGCGATCTCGATCGCGAAGGAAATCGCCATCAGCGATTTTACAGTACTCCGCAAATCGGACCTGATTACAGAACGAATAACACTGCGAACTCTACATTCGTTACAACAGGTTCGTTCGATCGGAAAAAGAGGAGTAAATTTTCGCTCTGGTCGAAGCTTTTTAAATCTAGATCCGAGAAATTCGAGAAGAAGCATAAAAGTCCTTCTCACGAATCGCACGGTTCTGATTCGGCTTCTTTATCGCCGTCGTGGTTCTCGACGATCTTGAACGGCCGTCGGATTAAGCAGCAATCGAGCCTTGCGACAGTCGAGGAATCGATCGCTGGTGCCGAACGGAGGCATCATTGTCAAACGATTAAACGCGGAATGTCGCCGGCGATAATATCGGAATCGGATGAAGAAGAGTGCGAAAGTCACGGTCGTTCTCCAATTTCTCAGAAGTTTCAACAATCTCCAATGACGATTCCTGGATCGGCTAAACGAGAGAAATTAGGGCACAAACAGAACGTTTCAGGATTCGCATTTTGTTTGAGTCCTCTGGTACGAGCAAGTCCCAACCGGAATTGGAATCAGAAGGTAATTCCGCCGGAAGTTTCTTTCTCCGGCAATCTTAGGGTTCCGGGGAAGCCTCATCTCTGTGCGAATCGGTCGAGGAAGATAGCGGACTTTGGAAGAGTCAATCACAACCGTTGA

mRNA sequence

ATGAGGTGCAAGAAGCACCAGTTTGACTGCAGCAGTAGCATCGGCGTCTGTGCTTCCTGTTTACGGGAGCGTCTTTTTTTGATTATCGCTGCTCAGGCACAAGCGGAGAAGCAATCGGAGATCCGTGCCGCCGCTGCCGGTGATAATCGTGCGGCGGACGATAGACCTCTTCCGCCACCGCCGCTTGTTTTTCTTCGTTCTGTTTCTCCTTTTGATCATCGTTTGAAATCGGATGAAGGTTTGTTGAGCGATCTCGATCGCGAAGGAAATCGCCATCAGCGATTTTACAGTACTCCGCAAATCGGACCTGATTACAGAACGAATAACACTGCGAACTCTACATTCGTTACAACAGGTTCGTTCGATCGGAAAAAGAGGAGTAAATTTTCGCTCTGGTCGAAGCTTTTTAAATCTAGATCCGAGAAATTCGAGAAGAAGCATAAAAGTCCTTCTCACGAATCGCACGGTTCTGATTCGGCTTCTTTATCGCCGTCGTGGTTCTCGACGATCTTGAACGGCCGTCGGATTAAGCAGCAATCGAGCCTTGCGACAGTCGAGGAATCGATCGCTGGTGCCGAACGGAGGCATCATTGTCAAACGATTAAACGCGGAATGTCGCCGGCGATAATATCGGAATCGGATGAAGAAGAGTGCGAAAGTCACGGTCGTTCTCCAATTTCTCAGAAGTTTCAACAATCTCCAATGACGATTCCTGGATCGGCTAAACGAGAGAAATTAGGGCACAAACAGAACGTTTCAGGATTCGCATTTTGTTTGAGTCCTCTGGTACGAGCAAGTCCCAACCGGAATTGGAATCAGAAGGTAATTCCGCCGGAAGTTTCTTTCTCCGGCAATCTTAGGGTTCCGGGGAAGCCTCATCTCTGTGCGAATCGGTCGAGGAAGATAGCGGACTTTGGAAGAGTCAATCACAACCGTTGA

Coding sequence (CDS)

ATGAGGTGCAAGAAGCACCAGTTTGACTGCAGCAGTAGCATCGGCGTCTGTGCTTCCTGTTTACGGGAGCGTCTTTTTTTGATTATCGCTGCTCAGGCACAAGCGGAGAAGCAATCGGAGATCCGTGCCGCCGCTGCCGGTGATAATCGTGCGGCGGACGATAGACCTCTTCCGCCACCGCCGCTTGTTTTTCTTCGTTCTGTTTCTCCTTTTGATCATCGTTTGAAATCGGATGAAGGTTTGTTGAGCGATCTCGATCGCGAAGGAAATCGCCATCAGCGATTTTACAGTACTCCGCAAATCGGACCTGATTACAGAACGAATAACACTGCGAACTCTACATTCGTTACAACAGGTTCGTTCGATCGGAAAAAGAGGAGTAAATTTTCGCTCTGGTCGAAGCTTTTTAAATCTAGATCCGAGAAATTCGAGAAGAAGCATAAAAGTCCTTCTCACGAATCGCACGGTTCTGATTCGGCTTCTTTATCGCCGTCGTGGTTCTCGACGATCTTGAACGGCCGTCGGATTAAGCAGCAATCGAGCCTTGCGACAGTCGAGGAATCGATCGCTGGTGCCGAACGGAGGCATCATTGTCAAACGATTAAACGCGGAATGTCGCCGGCGATAATATCGGAATCGGATGAAGAAGAGTGCGAAAGTCACGGTCGTTCTCCAATTTCTCAGAAGTTTCAACAATCTCCAATGACGATTCCTGGATCGGCTAAACGAGAGAAATTAGGGCACAAACAGAACGTTTCAGGATTCGCATTTTGTTTGAGTCCTCTGGTACGAGCAAGTCCCAACCGGAATTGGAATCAGAAGGTAATTCCGCCGGAAGTTTCTTTCTCCGGCAATCTTAGGGTTCCGGGGAAGCCTCATCTCTGTGCGAATCGGTCGAGGAAGATAGCGGACTTTGGAAGAGTCAATCACAACCGTTGA

Protein sequence

MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAAAGDNRAADDRPLPPPPLVFLRSVSPFDHRLKSDEGLLSDLDREGNRHQRFYSTPQIGPDYRTNNTANSTFVTTGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIKQQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTIPGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVIPPEVSFSGNLRVPGKPHLCANRSRKIADFGRVNHNR

Homology

[Close]

BLAST of CmoCh06G012120 vs. ExPASy TrEMBL
Match: A0A6J1FWR4 (uncharacterized protein LOC111447641 OS=Cucurbita moschata OX=3662 GN=LOC111447641 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 2.8e-174
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAAAGDNRAADDRPLPPP 60
           MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAAAGDNRAADDRPLPPP
Sbjct: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAAAGDNRAADDRPLPPP 60

Query: 61  PLVFLRSVSPFDHRLKSDEGLLSDLDREGNRHQRFYSTPQIGPDYRTNNTANSTFVTTGS 120
           PLVFLRSVSPFDHRLKSDEGLLSDLDREGNRHQRFYSTPQIGPDYRTNNTANSTFVTTGS
Sbjct: 61  PLVFLRSVSPFDHRLKSDEGLLSDLDREGNRHQRFYSTPQIGPDYRTNNTANSTFVTTGS 120

Query: 121 FDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIKQQS 180
           FDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIKQQS
Sbjct: 121 FDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIKQQS 180

Query: 181 SLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTIPGS 240
           SLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTIPGS
Sbjct: 181 SLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTIPGS 240

Query: 241 AKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVIPPEVSFSGNLRVPGKPHLCANRSR 300
           AKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVIPPEVSFSGNLRVPGKPHLCANRSR
Sbjct: 241 AKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVIPPEVSFSGNLRVPGKPHLCANRSR 300

Query: 301 KIADFGRVNHNR 313
           KIADFGRVNHNR
Sbjct: 301 KIADFGRVNHNR 312

[Close]

BLAST of CmoCh06G012120 vs. ExPASy TrEMBL
Match: A0A6J1IG75 (uncharacterized protein LOC111473474 OS=Cucurbita maxima OX=3661 GN=LOC111474358 PE=4 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 1.1e-170
Identity = 308/315 (97.78%), Postives = 311/315 (98.73%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAAAGDNRAADDRPLPPP 60
           MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAAAGDNRAADDRPLPPP
Sbjct: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAAAGDNRAADDRPLPPP 60

Query: 61  PLVFLRSVSPFDHRLKSDEGLLSDLDREG---NRHQRFYSTPQIGPDYRTNNTANSTFVT 120
           PLVFLRSVSP+DHRLKSDEGLLSDLDREG   NRHQRFYSTPQIGPDYRTNNTANSTFVT
Sbjct: 61  PLVFLRSVSPYDHRLKSDEGLLSDLDREGNRRNRHQRFYSTPQIGPDYRTNNTANSTFVT 120

Query: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180
           TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK
Sbjct: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRRIK 180

Query: 181 QQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240
           QQSSLATVEESIAGAERRHHC+TIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI
Sbjct: 181 QQSSLATVEESIAGAERRHHCETIKRGMSPAIISESDEEECESHGRSPISQKFQQSPMTI 240

Query: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVIPPEVSFSGNLRVPGKPHLCAN 300
           PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKV+ PEVSFSGNLRVPGKPHLCAN
Sbjct: 241 PGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVMSPEVSFSGNLRVPGKPHLCAN 300

Query: 301 RSRKIADFGRVNHNR 313
           RSRKIADFGRVNHNR
Sbjct: 301 RSRKIADFGRVNHNR 315

[Close]

BLAST of CmoCh06G012120 vs. ExPASy TrEMBL
Match: A0A5D3D3J1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003230 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 2.0e-119
Identity = 240/317 (75.71%), Postives = 266/317 (83.91%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEK-QSEIRAAAAGDNRAADDRPLPP 60
           MRCKKH  D +S++GVCASCLRERL  IIAAQAQAEK QS++    +G  R+ADD PL P
Sbjct: 1   MRCKKHHSDFTSTVGVCASCLRERLLSIIAAQAQAEKNQSQL---TSGGIRSADD-PL-P 60

Query: 61  PPLVFLRSVSPFDHRLKSDEGLLSDLDREGN---RHQRFYSTPQIGPDYRTNNTANSTFV 120
           PPL+FL SVSP  H  KS+E L ++LDREGN   RHQRFYSTPQIGP+ RTNN+AN+TFV
Sbjct: 61  PPLLFLHSVSP--HATKSNEDLWTNLDREGNLRSRHQRFYSTPQIGPNCRTNNSANTTFV 120

Query: 121 TTGSFDRKKRS-KFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRR 180
           TTGSFDRK+RS KFSLWSKLF+SRSEKFEK HKSPS ESHG  S+S SPSWFSTI +GRR
Sbjct: 121 TTGSFDRKQRSKKFSLWSKLFRSRSEKFEKNHKSPSRESHGPGSSSSSPSWFSTIFHGRR 180

Query: 181 IKQQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPM 240
           IK+QSSL  VEESI  AERR HCQ I+RGMSP  +S+SD EECE   RSPISQKFQ SPM
Sbjct: 181 IKRQSSLTPVEESIPVAERR-HCQAIERGMSPVRVSDSD-EECEGPDRSPISQKFQLSPM 240

Query: 241 TIPGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVIPPEVSFSGNLRVPGKPHLC 300
             PGSAKR +LGH QNVSGFAFCLSPLVRASPNRNWNQKVIPPE +FSGN++VP KPHLC
Sbjct: 241 AAPGSAKRGRLGHNQNVSGFAFCLSPLVRASPNRNWNQKVIPPETAFSGNIKVPAKPHLC 300

Query: 301 ANRSRKIADFGRVNHNR 313
           ANRSRKIADFGRVNHNR
Sbjct: 301 ANRSRKIADFGRVNHNR 308

[Close]

BLAST of CmoCh06G012120 vs. ExPASy TrEMBL
Match: A0A1S3AVZ2 (uncharacterized protein LOC103483430 OS=Cucumis melo OX=3656 GN=LOC103483430 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 2.0e-119
Identity = 240/317 (75.71%), Postives = 266/317 (83.91%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEK-QSEIRAAAAGDNRAADDRPLPP 60
           MRCKKH  D +S++GVCASCLRERL  IIAAQAQAEK QS++    +G  R+ADD PL P
Sbjct: 1   MRCKKHHSDFTSTVGVCASCLRERLLSIIAAQAQAEKNQSQL---TSGGIRSADD-PL-P 60

Query: 61  PPLVFLRSVSPFDHRLKSDEGLLSDLDREGN---RHQRFYSTPQIGPDYRTNNTANSTFV 120
           PPL+FL SVSP  H  KS+E L ++LDREGN   RHQRFYSTPQIGP+ RTNN+AN+TFV
Sbjct: 61  PPLLFLHSVSP--HATKSNEDLWTNLDREGNLRSRHQRFYSTPQIGPNCRTNNSANTTFV 120

Query: 121 TTGSFDRKKRS-KFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRR 180
           TTGSFDRK+RS KFSLWSKLF+SRSEKFEK HKSPS ESHG  S+S SPSWFSTI +GRR
Sbjct: 121 TTGSFDRKQRSKKFSLWSKLFRSRSEKFEKNHKSPSRESHGPGSSSSSPSWFSTIFHGRR 180

Query: 181 IKQQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPM 240
           IK+QSSL  VEESI  AERR HCQ I+RGMSP  +S+SD EECE   RSPISQKFQ SPM
Sbjct: 181 IKRQSSLTPVEESIPVAERR-HCQAIERGMSPVRVSDSD-EECEGPDRSPISQKFQLSPM 240

Query: 241 TIPGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVIPPEVSFSGNLRVPGKPHLC 300
             PGSAKR +LGH QNVSGFAFCLSPLVRASPNRNWNQKVIPPE +FSGN++VP KPHLC
Sbjct: 241 AAPGSAKRGRLGHNQNVSGFAFCLSPLVRASPNRNWNQKVIPPETAFSGNIKVPAKPHLC 300

Query: 301 ANRSRKIADFGRVNHNR 313
           ANRSRKIADFGRVNHNR
Sbjct: 301 ANRSRKIADFGRVNHNR 308

[Close]

BLAST of CmoCh06G012120 vs. ExPASy TrEMBL
Match: A0A0A0L4I6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128830 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 4.2e-117
Identity = 235/317 (74.13%), Postives = 263/317 (82.97%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEK-QSEIRAAAAGDNRAADDRPLPP 60
           MRCKKH  D +S++GVCASCLRERL  IIAAQAQAEK QS++     G  R+ADD PL P
Sbjct: 1   MRCKKHHSDFTSTVGVCASCLRERLLSIIAAQAQAEKNQSQL---TYGGIRSADD-PL-P 60

Query: 61  PPLVFLRSVSPFDHRLKSDEGLLSDLDREGNR---HQRFYSTPQIGPDYRTNNTANSTFV 120
           PPL+F+ SVSP  H  KSDE L S+LDREGNR   HQRFYSTPQIGP+ RTNN+AN+TFV
Sbjct: 61  PPLLFIHSVSP--HATKSDEDLWSNLDREGNRRFLHQRFYSTPQIGPNGRTNNSANTTFV 120

Query: 121 TTGSFDRKKRS-KFSLWSKLFKSRSEKFEKKHKSPSHESHGSDSASLSPSWFSTILNGRR 180
           TTGSFDRK+RS KFSLWSKLF+SRS+KFEK HKSPS ESHG  S+S SPSWFSTI +G R
Sbjct: 121 TTGSFDRKQRSKKFSLWSKLFRSRSDKFEKNHKSPSRESHGPGSSSSSPSWFSTIFHGHR 180

Query: 181 IKQQSSLATVEESIAGAERRHHCQTIKRGMSPAIISESDEEECESHGRSPISQKFQQSPM 240
            K+QSSL+ VEESI+ AERR HC  I+RGMSP  +S+SD EECE   RSPISQKFQ SPM
Sbjct: 181 TKRQSSLSPVEESISVAERR-HCHAIERGMSPVRVSDSD-EECEGPDRSPISQKFQLSPM 240

Query: 241 TIPGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKVIPPEVSFSGNLRVPGKPHLC 300
             PGSAKR +LGH QNVSGFAFCLSPL+RASPNRNWNQK IPPE +FSGN++VP KPHLC
Sbjct: 241 AAPGSAKRGRLGHNQNVSGFAFCLSPLMRASPNRNWNQKAIPPETAFSGNIKVPAKPHLC 300

Query: 301 ANRSRKIADFGRVNHNR 313
           ANRSRKIADFGRVNHNR
Sbjct: 301 ANRSRKIADFGRVNHNR 308

[Close]

BLAST of CmoCh06G012120 vs. TAIR 10
Match: AT2G44600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60200.1); Has 56 Blast hits to 55 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 178.3 bits (451), Expect = 9.4e-45
Identity = 131/333 (39.34%), Postives = 182/333 (54.65%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAAAGDNRAADDRPLPPP 60
           MRCK+H  D SSSIGVCASCLRERLF +  + A +E           DN     R + PP
Sbjct: 1   MRCKRHTVDFSSSIGVCASCLRERLFTLAVSTAASEND---------DNDHRHSR-ISPP 60

Query: 61  PLVFLRSVSPFDHRLKSDEGL---LSDLDREGNRHQRFYSTPQIGPDYRTNNTANSTFVT 120
           PL+F RSVSP+    KSD G        D   + + RF++TPQ+      ++++   F +
Sbjct: 61  PLLFPRSVSPYVAPRKSDAGTGTGAGGRDSVASSNNRFFATPQV---VVQSSSSEKVFES 120

Query: 121 TGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPSHESHGS--DSASLSPSWFSTILNGRR 180
             SF +KK+S  S +S  F++RS+ ++ +  S    +  S   SA+ S SWFS +++ R 
Sbjct: 121 DRSF-KKKKSGLSRFSSFFRTRSDDYDSRRDSCDASTVFSQPSSATTSRSWFSKVISVRS 180

Query: 181 IKQQSSLATVEESIAGAERRHH-------CQTIKRGMSPAIISESDEEECESHGRSPISQ 240
            KQ ++     E +  +E  HH        Q   RGMSPA  S +++E  E    SP   
Sbjct: 181 KKQSTTNTCYIEDLIASESDHHHHNQNRPRQRYCRGMSPAGDSTTNDESVE---ESP--G 240

Query: 241 KFQQSP-MTIPGSAKREKLGHKQNVSGFAFCLSPLVRASPN--RNWNQKVIPPEVSFSGN 300
           + +++P M  PG  K   +G  ++VSG AFCLSPLVRA PN   NW  K  PP+  +SG 
Sbjct: 241 RLRRTPVMGTPGRKKTATIGIGRSVSGMAFCLSPLVRAKPNCSSNWKAK-FPPDFGYSGE 300

Query: 301 LRVPGKPHL------CANRSRKIADFGRVNHNR 313
           L+ P KPHL      C NRS+K+ D GRV+H R
Sbjct: 301 LKSPAKPHLSTAASFCGNRSKKLVDLGRVDHRR 313

[Close]

BLAST of CmoCh06G012120 vs. TAIR 10
Match: AT3G60200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44600.1); Has 60 Blast hits to 60 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 154.5 bits (389), Expect = 1.4e-37
Identity = 129/334 (38.62%), Postives = 179/334 (53.59%), Query Frame = 0


Query: 1   MRCKKHQFDCSSSIGVCASCLRERLFLIIAAQAQAEKQSEIRAAAAGDNRAADDRPLPPP 60
           MRCK+H  D SSS GVCASCLRERL  + A+ A       + AA   +     +    PP
Sbjct: 1   MRCKRHTVDLSSSNGVCASCLRERLLSLAASAA-------VSAAVEDNQSKKSNNNNHPP 60

Query: 61  PLVFLRSVSPFDHRLKSDEGLLSDLDREGNRHQRFYSTPQIG------PDYRTNNTANST 120
            L+F RSVSP+  R KSD G     D   + ++RF +TPQI        D+ +N +  S 
Sbjct: 61  LLIFPRSVSPYVTRRKSDAG-AGGGDPLVSSNRRFITTPQIDLVGYSCKDFESNRSNKS- 120

Query: 121 FVTTGSFDRKKRSKFSLWSKLFKSRSEKFEKKHKSPS------HESHGSDSASLSPSWFS 180
                    K+  K S +S LF++RSE F+   KS +        S  S S+S S SW S
Sbjct: 121 ---------KQGKKVSRFSNLFRARSEDFDTNPKSNNPRFSSCDASEISSSSSSSRSWIS 180

Query: 181 TILN-GRRIKQQSSLATVEESIAGAE-RRHHCQTIKRGMSPAIISESDEEECESHGRSPI 240
           TIL+ GRR KQ ++   +E+ IA    +R +C    RGMSP   +E  E+  ES      
Sbjct: 181 TILSTGRRKKQPTTACYIEDVIAARRPQRIYC----RGMSPVRDTE-PEQSAES------ 240

Query: 241 SQKFQQSPMTIPGSAKREKLGHKQNVSGFAFCLSPLVRASPNRNWNQKV-IPPEVSFSGN 300
            ++ +++P T     ++  +G  +++SG AFCLSPLVRASPN  + +K+  P E   SG 
Sbjct: 241 IEELRRTPATKTPGRRKIAMGIGKSMSGMAFCLSPLVRASPNCPFKRKMRFPSEFGNSGE 300

Query: 301 L-RVPGKPHL------CANRSRKIADFGRVNHNR 313
           +  VP KPH+      CANRS+K+ D GRV+  R
Sbjct: 301 VTAVPEKPHISAAASFCANRSKKLVDLGRVDRRR 305

The following BLAST results are available for this feature:

BLAST of CmoCh06G012120 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh06G012120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWR4	2.8e-174	100.00	uncharacterized protein LOC111447641 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]
A0A6J1IG75	1.1e-170	97.78	uncharacterized protein LOC111473474 OS=Cucurbita maxima OX=3661 GN=LOC111474358...	[more]
A0A5D3D3J1	2.0e-119	75.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AVZ2	2.0e-119	75.71	uncharacterized protein LOC103483430 OS=Cucumis melo OX=3656 GN=LOC103483430 PE=...	[more]
A0A0A0L4I6	4.2e-117	74.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128830 PE=4 SV=1	[more]

BLAST of CmoCh06G012120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44600.1	9.4e-45	39.34	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G60200.1	1.4e-37	38.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..238
None	No IPR available	PANTHER	PTHR35486	EXPRESSED PROTEIN	coord: 1..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G012120.1	CmoCh06G012120.1	mRNA