CmoCh06G007750 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G007750
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Myeloid leukemia factor 1
Location	Cmo_Chr06: 4030461 .. 4033159 (-)
RNA-Seq Expression	CmoCh06G007750
Synteny	CmoCh06G007750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCGGAATTCCCCTTCTTTCCCAATTCTGAAATTTTTGAAACGATAGTAGATTCGCAATTCGGAATTCCCCTTCTTTCCCAATTCTGAAATTTCTTTTGAAACGATAGTGATTCTGGCGAATTTCTCCCTATCTTGTTCGCTTAAGGTACAGCTTCTCTCTCTAACAGGAACGGATGAGCTAGGGTTTGTGTTATATTTCAAGAATTTAGATGATGTTTATTTGTTCGTTGTACTTTTTTTGGACTTTGTTTCTTGGAGTACGAGTACTTTTTTATATTACTGTGTTATGCAGTCGTTTTTTTTTTTAATTTTTTATGTGGCATTGCTCATGCTAGTTTGGTTGCATGTTATGTAAATGGTGGATTTTTTAATTTCTTTGTTATTTTGAATCTTTAATTATAGGATTTCTGGCTTCTTGCATTACTGTTCTTGATATTATCTTTGGTGATTTTTGTATTCTTTTTCTGTTGATGTTCGATTCGTGAAAATCATGAAATAGTTTTGATTATGAAGTTTCAGTTTACGTGATCAAGCGGATCATACTGAATGTTATTTGTTGGCATATGTTTTTCATTGACGTGTCTTGTCTTTTTTCCAGAGCATATTTTTTGAACTGTAACGATGCATAGAAGGAGCAGAGGTGGTGGGGATGCTTTTTTTGATTTTGACGATCCCTTTGCTGGGTTTGGAGGCTTTCCGGGTCAAAGAAGCTTAATTTCTGATTTTTTTGGTGGAAGGGATCCATTTGATGATCCTTTCTTCAGGAGTCCATTTGGAAGCATGTTCGAATCAAGCTTCTTTGTTGGTTCTGGAATTCCTTTTGCTAACATGCATGCGTCTGGATTCCTTGATCATCAGCCCCCTGAGGCTAAAAGACCAAGGGGTCTAATTATTGAGGAAATAAATTCAGATGATGAAAAAGAAGCAGAAAAAGAAAGTAAAAATACAAAGAGTTCTTCCAAAGAGCCTCTTGATGAAGGCCCTGATGATGAAGGTGAGAATCAACTTGTCCGCAATGTTATGTTTGTATTCTTGCTTTTATGCATATTCAGTGCAATCTGTGTTGCAATATCAAAGGGTGTTTCCTTCTTTGTTGTTTCAGAGAAGGGGAACCAACATTTCCAGCTCGTGGATCATCATAGTAGACCAAATCAGAGGCATGTTCGACCTCAAGCTAATAGCTTCACATTTCAGAGCTCCTCTGTAACTTATGGAAGTTCGAATGGGACATATTATACTTCATCAAGAACGAGGAGGGCTGGAAGTGATGGTGTAAGTGAACTTAAATGCCACCAAGGAGTTGATTCTCTTAAATTGACTTCTTCCCTCATTTATCTATCTTCTGTAAATAGGTGGTTTTCGAAGAAAGCAAGGAAGCTGATACCGCAACCAGACAAGCAACCCATAAAGTTTCAAGAGGACTTCATTATAAGGTATGGACAAAGAAAATTTGATCCCTTGAGATTCATAATGCCTTTCTGTAGTTGTATCCATGTTGAAAATCTTGTTTGATATTCCTTTTAGGGCCATTCATTTACAAGGAAACTAAATCCTGATGGTAAGGTGGATACCATGCAAACTTTGCATAATCTTAATGGAGGTATGTAACTATTCATACCGAACTGTTTTTTGTGTTTGCCTGTAAGCTGGATGCCTACAATGTCAAACATTTTTGTTGTAAATATGCAGATGAGCTTGAAAGTTTTGAAAATGCTTGGGCAAGGAATTCAAGAAGTTTGCCTAGCTGGCCTGGTTGTTCAAATGGCTTTGATAATATTGGTAATTATTATAATCATTCTTTATTATTTTTACTTTACTATTTAATTAAACTTTACTTCTATGATCTGATTCTTTTGTCTGCCCCCTCCCACAGACCCACCTTTATTTCTATTTTGGAAACTTGAATACTAAATGTGAGATCGCACCTCAGTTGGAGAGGGGAACGAAACATGGAAACCTCTCTCTCGTTGATGCATTTTAAAACTGTGAGGGAAAGCTCAAAGAGGACAATATTTGCTAATAATGGGCATAGGGTGTTACACTAGAACTCGCGTTAGCGACCAAATTATCACTTGGATAATTTGTTTAAAGTTTAGTCTAGGGAATTCTTAAGAAGCTAATGTTCAAAACTATTACTATCTAACTCCAGATTGCTACTACTAAAATTTTATGGATACTATGAAGTGTCTGCTAACTTCATTTCCCGTCGGACAGCAGGTGGCATGGGTCTAAATGGCCAAACTAACCAAGGTGGGTTGGCAGTTCTCTCCGCTCAGCACCCTCAAGTGGCTGGAAGGACGGCCGGGGAAGGCAGCAGTAACCCGAGATCCTCCCGCGCGCAGCAAGTGAACAGAAGCAGGAAAGATGCAAGGCACATGAGTGCCTAAACTTGTGGAATCGAAAGTTCAGGCCTGATATGGAAGGTGGTCTTTGCTGCATCTTTTGTTGAATCCATTTTACTAATAGTTTCTCATATTGCAGTTTGATGAAACTGAGTAGTTGTGTTAGAAAAATGGCATTCTTAGAAATTGAATGAAGATGATACTGTTTGTATTCAGTGCGAATTCTTCACAGCCACCAAATTCAAAATGTATATTAAATTGTAGTGAAAGTCGGTTATTTGAAAGGGAAATGAAGCAAGGAAGATACAAAGTACACGTGAATGTTAATAAAGGACAAAAAAAAGACAATTTTAG

mRNA sequence

AATTCGGAATTCCCCTTCTTTCCCAATTCTGAAATTTTTGAAACGATAGTAGATTCGCAATTCGGAATTCCCCTTCTTTCCCAATTCTGAAATTTCTTTTGAAACGATAGTGATTCTGGCGAATTTCTCCCTATCTTGTTCGCTTAAGAGCATATTTTTTGAACTGTAACGATGCATAGAAGGAGCAGAGGTGGTGGGGATGCTTTTTTTGATTTTGACGATCCCTTTGCTGGGTTTGGAGGCTTTCCGGGTCAAAGAAGCTTAATTTCTGATTTTTTTGGTGGAAGGGATCCATTTGATGATCCTTTCTTCAGGAGTCCATTTGGAAGCATGTTCGAATCAAGCTTCTTTGTTGGTTCTGGAATTCCTTTTGCTAACATGCATGCGTCTGGATTCCTTGATCATCAGCCCCCTGAGGCTAAAAGACCAAGGGGTCTAATTATTGAGGAAATAAATTCAGATGATGAAAAAGAAGCAGAAAAAGAAAGTAAAAATACAAAGAGTTCTTCCAAAGAGCCTCTTGATGAAGGCCCTGATGATGAAGAGAAGGGGAACCAACATTTCCAGCTCGTGGATCATCATAGTAGACCAAATCAGAGGCATGTTCGACCTCAAGCTAATAGCTTCACATTTCAGAGCTCCTCTGTAACTTATGGAAGTTCGAATGGGACATATTATACTTCATCAAGAACGAGGAGGGCTGGAAGTGATGGTGTGGTTTTCGAAGAAAGCAAGGAAGCTGATACCGCAACCAGACAAGCAACCCATAAAGTTTCAAGAGGACTTCATTATAAGGGCCATTCATTTACAAGGAAACTAAATCCTGATGGTAAGGTGGATACCATGCAAACTTTGCATAATCTTAATGGAGATGAGCTTGAAAGTTTTGAAAATGCTTGGGCAAGGAATTCAAGAAGTTTGCCTAGCTGGCCTGGTTGTTCAAATGGCTTTGATAATATTGCAGGTGGCATGGGTCTAAATGGCCAAACTAACCAAGGTGGGTTGGCAGTTCTCTCCGCTCAGCACCCTCAAGTGGCTGGAAGGACGGCCGGGGAAGGCAGCAGTAACCCGAGATCCTCCCGCGCGCAGCAAGTGAACAGAAGCAGGAAAGATGCAAGGCACATGAGTGCCTAAACTTGTGGAATCGAAAGTTCAGGCCTGATATGGAAGGTGGTCTTTGCTGCATCTTTTGTTGAATCCATTTTACTAATAGTTTCTCATATTGCAGTTTGATGAAACTGAGTAGTTGTGTTAGAAAAATGGCATTCTTAGAAATTGAATGAAGATGATACTGTTTGTATTCAGTGCGAATTCTTCACAGCCACCAAATTCAAAATGTATATTAAATTGTAGTGAAAGTCGGTTATTTGAAAGGGAAATGAAGCAAGGAAGATACAAAGTACACGTGAATGTTAATAAAGGACAAAAAAAAGACAATTTTAG

Coding sequence (CDS)

ATGCATAGAAGGAGCAGAGGTGGTGGGGATGCTTTTTTTGATTTTGACGATCCCTTTGCTGGGTTTGGAGGCTTTCCGGGTCAAAGAAGCTTAATTTCTGATTTTTTTGGTGGAAGGGATCCATTTGATGATCCTTTCTTCAGGAGTCCATTTGGAAGCATGTTCGAATCAAGCTTCTTTGTTGGTTCTGGAATTCCTTTTGCTAACATGCATGCGTCTGGATTCCTTGATCATCAGCCCCCTGAGGCTAAAAGACCAAGGGGTCTAATTATTGAGGAAATAAATTCAGATGATGAAAAAGAAGCAGAAAAAGAAAGTAAAAATACAAAGAGTTCTTCCAAAGAGCCTCTTGATGAAGGCCCTGATGATGAAGAGAAGGGGAACCAACATTTCCAGCTCGTGGATCATCATAGTAGACCAAATCAGAGGCATGTTCGACCTCAAGCTAATAGCTTCACATTTCAGAGCTCCTCTGTAACTTATGGAAGTTCGAATGGGACATATTATACTTCATCAAGAACGAGGAGGGCTGGAAGTGATGGTGTGGTTTTCGAAGAAAGCAAGGAAGCTGATACCGCAACCAGACAAGCAACCCATAAAGTTTCAAGAGGACTTCATTATAAGGGCCATTCATTTACAAGGAAACTAAATCCTGATGGTAAGGTGGATACCATGCAAACTTTGCATAATCTTAATGGAGATGAGCTTGAAAGTTTTGAAAATGCTTGGGCAAGGAATTCAAGAAGTTTGCCTAGCTGGCCTGGTTGTTCAAATGGCTTTGATAATATTGCAGGTGGCATGGGTCTAAATGGCCAAACTAACCAAGGTGGGTTGGCAGTTCTCTCCGCTCAGCACCCTCAAGTGGCTGGAAGGACGGCCGGGGAAGGCAGCAGTAACCCGAGATCCTCCCGCGCGCAGCAAGTGAACAGAAGCAGGAAAGATGCAAGGCACATGAGTGCCTAA

Protein sequence

MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFFVGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEGPDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSDGVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFENAWARNSRSLPSWPGCSNGFDNIAGGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNPRSSRAQQVNRSRKDARHMSA

Homology

[Close]

BLAST of CmoCh06G007750 vs. ExPASy TrEMBL
Match: A0A6J1FWW2 (uncharacterized protein LOC111448181 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448181 PE=3 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 2.2e-177
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF 60
           MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF
Sbjct: 1   MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF 60

Query: 61  VGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEG 120
           VGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEG
Sbjct: 61  VGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEG 120

Query: 121 PDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD 180
           PDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD
Sbjct: 121 PDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD 180

Query: 181 GVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFE 240
           GVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFE
Sbjct: 181 GVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFE 240

Query: 241 NAWARNSRSLPSWPGCSNGFDNIAGGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP 300
           NAWARNSRSLPSWPGCSNGFDNIAGGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP
Sbjct: 241 NAWARNSRSLPSWPGCSNGFDNIAGGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP 300

Query: 301 RSSRAQQVNRSRKDARHMSA 321
           RSSRAQQVNRSRKDARHMSA
Sbjct: 301 RSSRAQQVNRSRKDARHMSA 320

[Close]

BLAST of CmoCh06G007750 vs. ExPASy TrEMBL
Match: A0A6J1FUA0 (uncharacterized protein LOC111448181 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448181 PE=3 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 1.5e-175
Identity = 319/320 (99.69%), Postives = 319/320 (99.69%), Query Frame = 0


Query: 1   MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF 60
           MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF
Sbjct: 1   MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF 60

Query: 61  VGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEG 120
           VGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEG
Sbjct: 61  VGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEG 120

Query: 121 PDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD 180
           PDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD
Sbjct: 121 PDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD 180

Query: 181 GVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFE 240
           GVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFE
Sbjct: 181 GVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFE 240

Query: 241 NAWARNSRSLPSWPGCSNGFDNIAGGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP 300
           NAWARNSRSLPSWPGCSNGFDNI GGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP
Sbjct: 241 NAWARNSRSLPSWPGCSNGFDNI-GGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP 300

Query: 301 RSSRAQQVNRSRKDARHMSA 321
           RSSRAQQVNRSRKDARHMSA
Sbjct: 301 RSSRAQQVNRSRKDARHMSA 319

[Close]

BLAST of CmoCh06G007750 vs. ExPASy TrEMBL
Match: A0A6J1KZA1 (uncharacterized protein LOC111498450 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498450 PE=3 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 2.5e-170
Identity = 309/320 (96.56%), Postives = 313/320 (97.81%), Query Frame = 0


Query: 1   MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF 60
           MHRRSRGGG+AFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF
Sbjct: 1   MHRRSRGGGEAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF 60

Query: 61  VGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEG 120
            GSGIPFANMHASGFLDHQPPE KRPRGLIIEEINSDDEKEAEKESKNTKSSSKEP+ EG
Sbjct: 61  GGSGIPFANMHASGFLDHQPPEPKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPIVEG 120

Query: 121 PDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD 180
           PDDEEKGNQH QLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD
Sbjct: 121 PDDEEKGNQHLQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD 180

Query: 181 GVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFE 240
           GVVFEESKEADTATRQATHKVSRGLH KGHSFTRKLNPDGKV+TMQTLHNLNGDELESFE
Sbjct: 181 GVVFEESKEADTATRQATHKVSRGLHNKGHSFTRKLNPDGKVNTMQTLHNLNGDELESFE 240

Query: 241 NAWARNSRSLPSWPGCSNGFDNIAGGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP 300
           NAWARNSRSLP WPGCSNGFDNIAGGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP
Sbjct: 241 NAWARNSRSLPGWPGCSNGFDNIAGGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP 300

Query: 301 RSSRAQQVNRSRKDARHMSA 321
           RSSRAQQ NRSRKDAR+MSA
Sbjct: 301 RSSRAQQANRSRKDARYMSA 320

[Close]

BLAST of CmoCh06G007750 vs. ExPASy TrEMBL
Match: A0A6J1FT13 (uncharacterized protein LOC111448181 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111448181 PE=3 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 3.7e-169
Identity = 311/320 (97.19%), Postives = 311/320 (97.19%), Query Frame = 0


Query: 1   MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF 60
           MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF
Sbjct: 1   MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF 60

Query: 61  VGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEG 120
           VGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEG
Sbjct: 61  VGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEG 120

Query: 121 PDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD 180
           PDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD
Sbjct: 121 PDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD 180

Query: 181 GVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFE 240
           GVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFE
Sbjct: 181 GVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFE 240

Query: 241 NAWARNSRSLPSWPGCSNGFDNIAGGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP 300
           NAWARNSRSLPSWP         AGGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP
Sbjct: 241 NAWARNSRSLPSWP---------AGGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP 300

Query: 301 RSSRAQQVNRSRKDARHMSA 321
           RSSRAQQVNRSRKDARHMSA
Sbjct: 301 RSSRAQQVNRSRKDARHMSA 311

[Close]

BLAST of CmoCh06G007750 vs. ExPASy TrEMBL
Match: A0A6J1FWX6 (uncharacterized protein LOC111448181 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111448181 PE=3 SV=1)

HSP 1 Score: 602.1 bits (1551), Expect = 1.4e-168
Identity = 310/320 (96.88%), Postives = 310/320 (96.88%), Query Frame = 0


Query: 1   MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF 60
           MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF
Sbjct: 1   MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFF 60

Query: 61  VGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEG 120
           VGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEG
Sbjct: 61  VGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEG 120

Query: 121 PDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD 180
           PDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD
Sbjct: 121 PDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSD 180

Query: 181 GVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFE 240
           GVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFE
Sbjct: 181 GVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFE 240

Query: 241 NAWARNSRSLPSWPGCSNGFDNIAGGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP 300
           NAWARNSRSLPSWP          GGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP
Sbjct: 241 NAWARNSRSLPSWP----------GGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNP 300

Query: 301 RSSRAQQVNRSRKDARHMSA 321
           RSSRAQQVNRSRKDARHMSA
Sbjct: 301 RSSRAQQVNRSRKDARHMSA 310

[Close]

BLAST of CmoCh06G007750 vs. TAIR 10
Match: AT4G22740.1 (glycine-rich protein )

HSP 1 Score: 220.3 bits (560), Expect = 2.2e-57
Identity = 141/292 (48.29%), Postives = 176/292 (60.27%), Query Frame = 0


Query: 8   GGDAFFDFD-DPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPF-GSMFESSFFVGSGI 67
           GG +F  F    F GFGG  G  SL+S+FFGGRDPFDDPFF  PF G MF+S+FF  S  
Sbjct: 22  GGGSFGGFGRGSFGGFGGPNGPPSLMSNFFGGRDPFDDPFFTQPFGGGMFQSNFFGPSMN 81

Query: 68  PFANMH--ASGFLD-HQPPEAKRPRGLIIEEINSDDEKEAE--KESKNT-----KSSSKE 127
           PFA MH    GF++ +QPP   R RG +IEEI+SDDEKE E  KE K +     +SSS+ 
Sbjct: 82  PFAEMHRLPQGFIENNQPPGPSRSRGPVIEEIDSDDEKEGEGDKEKKGSLGKHGRSSSEA 141

Query: 128 PLDEGPDDE---------------------------EKGNQHFQLVDHHSRPNQRHVRPQ 187
             ++    E                           E+ N   Q ++ ++  N    +PQ
Sbjct: 142 ETEDARVRERRNRQMQSMNVNAERRNREMQNMNVNAERRNPQMQNMNVNAMVNNGQWQPQ 201

Query: 188 ANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSDGVVFEESKEADTATRQATHKVSRGLHYK 247
             S++FQSS+VTYG  NG YYTSS+TRR GSDG+  EES+EA+TATR+A H +SRGLH K
Sbjct: 202 TGSYSFQSSTVTYGGQNGNYYTSSKTRRTGSDGLTLEESREANTATREAAHMISRGLHNK 261

Query: 248 GHSFTRKLNPDGKVDTMQTLHNLNGDELESFENAWARNSRSLPSWPGCSNGF 261
           GH+  RKLN DG+VDT QTLHNLN DEL  FE +W+ N+R     P  S  F
Sbjct: 262 GHTVARKLNSDGRVDTTQTLHNLNEDELAGFEQSWSGNARRQMQLPSRSGSF 313

[Close]

BLAST of CmoCh06G007750 vs. TAIR 10
Match: AT4G22740.2 (glycine-rich protein )

HSP 1 Score: 220.3 bits (560), Expect = 2.2e-57
Identity = 141/292 (48.29%), Postives = 176/292 (60.27%), Query Frame = 0


Query: 8   GGDAFFDFD-DPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPF-GSMFESSFFVGSGI 67
           GG +F  F    F GFGG  G  SL+S+FFGGRDPFDDPFF  PF G MF+S+FF  S  
Sbjct: 22  GGGSFGGFGRGSFGGFGGPNGPPSLMSNFFGGRDPFDDPFFTQPFGGGMFQSNFFGPSMN 81

Query: 68  PFANMH--ASGFLD-HQPPEAKRPRGLIIEEINSDDEKEAE--KESKNT-----KSSSKE 127
           PFA MH    GF++ +QPP   R RG +IEEI+SDDEKE E  KE K +     +SSS+ 
Sbjct: 82  PFAEMHRLPQGFIENNQPPGPSRSRGPVIEEIDSDDEKEGEGDKEKKGSLGKHGRSSSEA 141

Query: 128 PLDEGPDDE---------------------------EKGNQHFQLVDHHSRPNQRHVRPQ 187
             ++    E                           E+ N   Q ++ ++  N    +PQ
Sbjct: 142 ETEDARVRERRNRQMQSMNVNAERRNREMQNMNVNAERRNPQMQNMNVNAMVNNGQWQPQ 201

Query: 188 ANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSDGVVFEESKEADTATRQATHKVSRGLHYK 247
             S++FQSS+VTYG  NG YYTSS+TRR GSDG+  EES+EA+TATR+A H +SRGLH K
Sbjct: 202 TGSYSFQSSTVTYGGQNGNYYTSSKTRRTGSDGLTLEESREANTATREAAHMISRGLHNK 261

Query: 248 GHSFTRKLNPDGKVDTMQTLHNLNGDELESFENAWARNSRSLPSWPGCSNGF 261
           GH+  RKLN DG+VDT QTLHNLN DEL  FE +W+ N+R     P  S  F
Sbjct: 262 GHTVARKLNSDGRVDTTQTLHNLNEDELAGFEQSWSGNARRQMQLPSRSGSF 313

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BLAST of CmoCh06G007750 vs. TAIR 10
Match: AT2G45380.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-43
Identity = 112/237 (47.26%), Postives = 139/237 (58.65%), Query Frame = 0


Query: 17  DPFAG-FGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFFVGSGIPFANMHASGF 76
           DPF G FGGF G        FGGRDPFDDPFF  PF  + E S    SG  F+N H +  
Sbjct: 222 DPFGGRFGGFRG------SLFGGRDPFDDPFFSRPFEDLLEPSNTFSSGASFSNAHKN-- 281

Query: 77  LDHQPPEAKRPRGLIIEEINSDDEKEAEK----ESKNTKSSSKEPLDEGPDDEEKGNQHF 136
                      RGL IEE+ SD+E E  K    + +   SS  +P  E P+D+    +  
Sbjct: 282 --------NGGRGLTIEELPSDEEVEERKDIGIDDQEHASSVNKPSVEHPEDDSDAERKI 341

Query: 137 QLVDHHSRPNQRH-VRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSDGVVFEESKEA 196
           Q V+  S  N+R   + +AN+F    S VTYG  +G YYTS+RTRR   DG+V EESKEA
Sbjct: 342 QNVNQRSDFNRREGTQSRANTFRHHISKVTYGGIHGAYYTSTRTRRKDGDGMVVEESKEA 401

Query: 197 DTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFENAWARNS 248
           D  T +ATH++SRG++ KGHS TRKLN  G V++ QTLHNL+ DEL  FE AW  NS
Sbjct: 402 DKTTGEATHRISRGINDKGHSVTRKLNSSGGVESTQTLHNLDEDELSGFEEAWKGNS 442

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BLAST of CmoCh06G007750 vs. TAIR 10
Match: AT2G45380.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G22740.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-27
Identity = 65/117 (55.56%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 132 QLVDHHSRPNQRH-VRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSDGVVFEESKEA 191
           Q V+  S  N+R   + +AN+F    S VTYG  +G YYTS+RTRR   DG+V EESKEA
Sbjct: 18  QNVNQRSDFNRREGTQSRANTFRHHISKVTYGGIHGAYYTSTRTRRKDGDGMVVEESKEA 77

Query: 192 DTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFENAWARNS 248
           D  T +ATH++SRG++ KGHS TRKLN  G V++ QTLHNL+ DEL  FE AW  NS
Sbjct: 78  DKTTGEATHRISRGINDKGHSVTRKLNSSGGVESTQTLHNLDEDELSGFEEAWKGNS 134

The following BLAST results are available for this feature:

BLAST of CmoCh06G007750 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh06G007750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWW2	2.2e-177	100.00	uncharacterized protein LOC111448181 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FUA0	1.5e-175	99.69	uncharacterized protein LOC111448181 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KZA1	2.5e-170	96.56	uncharacterized protein LOC111498450 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FT13	3.7e-169	97.19	uncharacterized protein LOC111448181 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FWX6	1.4e-168	96.88	uncharacterized protein LOC111448181 isoform X4 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CmoCh06G007750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22740.1	2.2e-57	48.29	glycine-rich protein	[more]
AT4G22740.2	2.2e-57	48.29	glycine-rich protein	[more]
AT2G45380.1	3.1e-43	47.26	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G45380.2	4.1e-27	55.56	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019376	Myeloid leukemia factor	PFAM	PF10248	Mlf1IP	coord: 67..245 e-value: 3.6E-15 score: 56.3
IPR019376	Myeloid leukemia factor	PANTHER	PTHR13105	MYELOID LEUKEMIA FACTOR	coord: 4..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..320

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G007750.1	CmoCh06G007750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm