
CmoCh06G007750 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTCGGAATTCCCCTTCTTTCCCAATTCTGAAATTTTTGAAACGATAGTAGATTCGCAATTCGGAATTCCCCTTCTTTCCCAATTCTGAAATTTCTTTTGAAACGATAGTGATTCTGGCGAATTTCTCCCTATCTTGTTCGCTTAAGGTACAGCTTCTCTCTCTAACAGGAACGGATGAGCTAGGGTTTGTGTTATATTTCAAGAATTTAGATGATGTTTATTTGTTCGTTGTACTTTTTTTGGACTTTGTTTCTTGGAGTACGAGTACTTTTTTATATTACTGTGTTATGCAGTCGTTTTTTTTTTTAATTTTTTATGTGGCATTGCTCATGCTAGTTTGGTTGCATGTTATGTAAATGGTGGATTTTTTAATTTCTTTGTTATTTTGAATCTTTAATTATAGGATTTCTGGCTTCTTGCATTACTGTTCTTGATATTATCTTTGGTGATTTTTGTATTCTTTTTCTGTTGATGTTCGATTCGTGAAAATCATGAAATAGTTTTGATTATGAAGTTTCAGTTTACGTGATCAAGCGGATCATACTGAATGTTATTTGTTGGCATATGTTTTTCATTGACGTGTCTTGTCTTTTTTCCAGAGCATATTTTTTGAACTGTAACGATGCATAGAAGGAGCAGAGGTGGTGGGGATGCTTTTTTTGATTTTGACGATCCCTTTGCTGGGTTTGGAGGCTTTCCGGGTCAAAGAAGCTTAATTTCTGATTTTTTTGGTGGAAGGGATCCATTTGATGATCCTTTCTTCAGGAGTCCATTTGGAAGCATGTTCGAATCAAGCTTCTTTGTTGGTTCTGGAATTCCTTTTGCTAACATGCATGCGTCTGGATTCCTTGATCATCAGCCCCCTGAGGCTAAAAGACCAAGGGGTCTAATTATTGAGGAAATAAATTCAGATGATGAAAAAGAAGCAGAAAAAGAAAGTAAAAATACAAAGAGTTCTTCCAAAGAGCCTCTTGATGAAGGCCCTGATGATGAAGGTGAGAATCAACTTGTCCGCAATGTTATGTTTGTATTCTTGCTTTTATGCATATTCAGTGCAATCTGTGTTGCAATATCAAAGGGTGTTTCCTTCTTTGTTGTTTCAGAGAAGGGGAACCAACATTTCCAGCTCGTGGATCATCATAGTAGACCAAATCAGAGGCATGTTCGACCTCAAGCTAATAGCTTCACATTTCAGAGCTCCTCTGTAACTTATGGAAGTTCGAATGGGACATATTATACTTCATCAAGAACGAGGAGGGCTGGAAGTGATGGTGTAAGTGAACTTAAATGCCACCAAGGAGTTGATTCTCTTAAATTGACTTCTTCCCTCATTTATCTATCTTCTGTAAATAGGTGGTTTTCGAAGAAAGCAAGGAAGCTGATACCGCAACCAGACAAGCAACCCATAAAGTTTCAAGAGGACTTCATTATAAGGTATGGACAAAGAAAATTTGATCCCTTGAGATTCATAATGCCTTTCTGTAGTTGTATCCATGTTGAAAATCTTGTTTGATATTCCTTTTAGGGCCATTCATTTACAAGGAAACTAAATCCTGATGGTAAGGTGGATACCATGCAAACTTTGCATAATCTTAATGGAGGTATGTAACTATTCATACCGAACTGTTTTTTGTGTTTGCCTGTAAGCTGGATGCCTACAATGTCAAACATTTTTGTTGTAAATATGCAGATGAGCTTGAAAGTTTTGAAAATGCTTGGGCAAGGAATTCAAGAAGTTTGCCTAGCTGGCCTGGTTGTTCAAATGGCTTTGATAATATTGGTAATTATTATAATCATTCTTTATTATTTTTACTTTACTATTTAATTAAACTTTACTTCTATGATCTGATTCTTTTGTCTGCCCCCTCCCACAGACCCACCTTTATTTCTATTTTGGAAACTTGAATACTAAATGTGAGATCGCACCTCAGTTGGAGAGGGGAACGAAACATGGAAACCTCTCTCTCGTTGATGCATTTTAAAACTGTGAGGGAAAGCTCAAAGAGGACAATATTTGCTAATAATGGGCATAGGGTGTTACACTAGAACTCGCGTTAGCGACCAAATTATCACTTGGATAATTTGTTTAAAGTTTAGTCTAGGGAATTCTTAAGAAGCTAATGTTCAAAACTATTACTATCTAACTCCAGATTGCTACTACTAAAATTTTATGGATACTATGAAGTGTCTGCTAACTTCATTTCCCGTCGGACAGCAGGTGGCATGGGTCTAAATGGCCAAACTAACCAAGGTGGGTTGGCAGTTCTCTCCGCTCAGCACCCTCAAGTGGCTGGAAGGACGGCCGGGGAAGGCAGCAGTAACCCGAGATCCTCCCGCGCGCAGCAAGTGAACAGAAGCAGGAAAGATGCAAGGCACATGAGTGCCTAAACTTGTGGAATCGAAAGTTCAGGCCTGATATGGAAGGTGGTCTTTGCTGCATCTTTTGTTGAATCCATTTTACTAATAGTTTCTCATATTGCAGTTTGATGAAACTGAGTAGTTGTGTTAGAAAAATGGCATTCTTAGAAATTGAATGAAGATGATACTGTTTGTATTCAGTGCGAATTCTTCACAGCCACCAAATTCAAAATGTATATTAAATTGTAGTGAAAGTCGGTTATTTGAAAGGGAAATGAAGCAAGGAAGATACAAAGTACACGTGAATGTTAATAAAGGACAAAAAAAAGACAATTTTAG AATTCGGAATTCCCCTTCTTTCCCAATTCTGAAATTTTTGAAACGATAGTAGATTCGCAATTCGGAATTCCCCTTCTTTCCCAATTCTGAAATTTCTTTTGAAACGATAGTGATTCTGGCGAATTTCTCCCTATCTTGTTCGCTTAAGAGCATATTTTTTGAACTGTAACGATGCATAGAAGGAGCAGAGGTGGTGGGGATGCTTTTTTTGATTTTGACGATCCCTTTGCTGGGTTTGGAGGCTTTCCGGGTCAAAGAAGCTTAATTTCTGATTTTTTTGGTGGAAGGGATCCATTTGATGATCCTTTCTTCAGGAGTCCATTTGGAAGCATGTTCGAATCAAGCTTCTTTGTTGGTTCTGGAATTCCTTTTGCTAACATGCATGCGTCTGGATTCCTTGATCATCAGCCCCCTGAGGCTAAAAGACCAAGGGGTCTAATTATTGAGGAAATAAATTCAGATGATGAAAAAGAAGCAGAAAAAGAAAGTAAAAATACAAAGAGTTCTTCCAAAGAGCCTCTTGATGAAGGCCCTGATGATGAAGAGAAGGGGAACCAACATTTCCAGCTCGTGGATCATCATAGTAGACCAAATCAGAGGCATGTTCGACCTCAAGCTAATAGCTTCACATTTCAGAGCTCCTCTGTAACTTATGGAAGTTCGAATGGGACATATTATACTTCATCAAGAACGAGGAGGGCTGGAAGTGATGGTGTGGTTTTCGAAGAAAGCAAGGAAGCTGATACCGCAACCAGACAAGCAACCCATAAAGTTTCAAGAGGACTTCATTATAAGGGCCATTCATTTACAAGGAAACTAAATCCTGATGGTAAGGTGGATACCATGCAAACTTTGCATAATCTTAATGGAGATGAGCTTGAAAGTTTTGAAAATGCTTGGGCAAGGAATTCAAGAAGTTTGCCTAGCTGGCCTGGTTGTTCAAATGGCTTTGATAATATTGCAGGTGGCATGGGTCTAAATGGCCAAACTAACCAAGGTGGGTTGGCAGTTCTCTCCGCTCAGCACCCTCAAGTGGCTGGAAGGACGGCCGGGGAAGGCAGCAGTAACCCGAGATCCTCCCGCGCGCAGCAAGTGAACAGAAGCAGGAAAGATGCAAGGCACATGAGTGCCTAAACTTGTGGAATCGAAAGTTCAGGCCTGATATGGAAGGTGGTCTTTGCTGCATCTTTTGTTGAATCCATTTTACTAATAGTTTCTCATATTGCAGTTTGATGAAACTGAGTAGTTGTGTTAGAAAAATGGCATTCTTAGAAATTGAATGAAGATGATACTGTTTGTATTCAGTGCGAATTCTTCACAGCCACCAAATTCAAAATGTATATTAAATTGTAGTGAAAGTCGGTTATTTGAAAGGGAAATGAAGCAAGGAAGATACAAAGTACACGTGAATGTTAATAAAGGACAAAAAAAAGACAATTTTAG ATGCATAGAAGGAGCAGAGGTGGTGGGGATGCTTTTTTTGATTTTGACGATCCCTTTGCTGGGTTTGGAGGCTTTCCGGGTCAAAGAAGCTTAATTTCTGATTTTTTTGGTGGAAGGGATCCATTTGATGATCCTTTCTTCAGGAGTCCATTTGGAAGCATGTTCGAATCAAGCTTCTTTGTTGGTTCTGGAATTCCTTTTGCTAACATGCATGCGTCTGGATTCCTTGATCATCAGCCCCCTGAGGCTAAAAGACCAAGGGGTCTAATTATTGAGGAAATAAATTCAGATGATGAAAAAGAAGCAGAAAAAGAAAGTAAAAATACAAAGAGTTCTTCCAAAGAGCCTCTTGATGAAGGCCCTGATGATGAAGAGAAGGGGAACCAACATTTCCAGCTCGTGGATCATCATAGTAGACCAAATCAGAGGCATGTTCGACCTCAAGCTAATAGCTTCACATTTCAGAGCTCCTCTGTAACTTATGGAAGTTCGAATGGGACATATTATACTTCATCAAGAACGAGGAGGGCTGGAAGTGATGGTGTGGTTTTCGAAGAAAGCAAGGAAGCTGATACCGCAACCAGACAAGCAACCCATAAAGTTTCAAGAGGACTTCATTATAAGGGCCATTCATTTACAAGGAAACTAAATCCTGATGGTAAGGTGGATACCATGCAAACTTTGCATAATCTTAATGGAGATGAGCTTGAAAGTTTTGAAAATGCTTGGGCAAGGAATTCAAGAAGTTTGCCTAGCTGGCCTGGTTGTTCAAATGGCTTTGATAATATTGCAGGTGGCATGGGTCTAAATGGCCAAACTAACCAAGGTGGGTTGGCAGTTCTCTCCGCTCAGCACCCTCAAGTGGCTGGAAGGACGGCCGGGGAAGGCAGCAGTAACCCGAGATCCTCCCGCGCGCAGCAAGTGAACAGAAGCAGGAAAGATGCAAGGCACATGAGTGCCTAA MHRRSRGGGDAFFDFDDPFAGFGGFPGQRSLISDFFGGRDPFDDPFFRSPFGSMFESSFFVGSGIPFANMHASGFLDHQPPEAKRPRGLIIEEINSDDEKEAEKESKNTKSSSKEPLDEGPDDEEKGNQHFQLVDHHSRPNQRHVRPQANSFTFQSSSVTYGSSNGTYYTSSRTRRAGSDGVVFEESKEADTATRQATHKVSRGLHYKGHSFTRKLNPDGKVDTMQTLHNLNGDELESFENAWARNSRSLPSWPGCSNGFDNIAGGMGLNGQTNQGGLAVLSAQHPQVAGRTAGEGSSNPRSSRAQQVNRSRKDARHMSA Homology
BLAST of CmoCh06G007750 vs. ExPASy TrEMBL
Match: A0A6J1FWW2 (uncharacterized protein LOC111448181 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448181 PE=3 SV=1) HSP 1 Score: 631.3 bits (1627), Expect = 2.2e-177 Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0
BLAST of CmoCh06G007750 vs. ExPASy TrEMBL
Match: A0A6J1FUA0 (uncharacterized protein LOC111448181 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448181 PE=3 SV=1) HSP 1 Score: 625.2 bits (1611), Expect = 1.5e-175 Identity = 319/320 (99.69%), Postives = 319/320 (99.69%), Query Frame = 0
BLAST of CmoCh06G007750 vs. ExPASy TrEMBL
Match: A0A6J1KZA1 (uncharacterized protein LOC111498450 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498450 PE=3 SV=1) HSP 1 Score: 607.8 bits (1566), Expect = 2.5e-170 Identity = 309/320 (96.56%), Postives = 313/320 (97.81%), Query Frame = 0
BLAST of CmoCh06G007750 vs. ExPASy TrEMBL
Match: A0A6J1FT13 (uncharacterized protein LOC111448181 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111448181 PE=3 SV=1) HSP 1 Score: 604.0 bits (1556), Expect = 3.7e-169 Identity = 311/320 (97.19%), Postives = 311/320 (97.19%), Query Frame = 0
BLAST of CmoCh06G007750 vs. ExPASy TrEMBL
Match: A0A6J1FWX6 (uncharacterized protein LOC111448181 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111448181 PE=3 SV=1) HSP 1 Score: 602.1 bits (1551), Expect = 1.4e-168 Identity = 310/320 (96.88%), Postives = 310/320 (96.88%), Query Frame = 0
BLAST of CmoCh06G007750 vs. TAIR 10
Match: AT4G22740.1 (glycine-rich protein ) HSP 1 Score: 220.3 bits (560), Expect = 2.2e-57 Identity = 141/292 (48.29%), Postives = 176/292 (60.27%), Query Frame = 0
BLAST of CmoCh06G007750 vs. TAIR 10
Match: AT4G22740.2 (glycine-rich protein ) HSP 1 Score: 220.3 bits (560), Expect = 2.2e-57 Identity = 141/292 (48.29%), Postives = 176/292 (60.27%), Query Frame = 0
BLAST of CmoCh06G007750 vs. TAIR 10
Match: AT2G45380.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 173.3 bits (438), Expect = 3.1e-43 Identity = 112/237 (47.26%), Postives = 139/237 (58.65%), Query Frame = 0
BLAST of CmoCh06G007750 vs. TAIR 10
Match: AT2G45380.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G22740.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 119.8 bits (299), Expect = 4.1e-27 Identity = 65/117 (55.56%), Postives = 81/117 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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