CmoCh06G007570 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G007570
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Copper chaperone for superoxide dismutase
Location	Cmo_Chr06: 3930697 .. 3937632 (+)
RNA-Seq Expression	CmoCh06G007570
Synteny	CmoCh06G007570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCATAACAATACCTACAGTACCTCTGAAGCTGGGAAGAATCTCGCTGGTCGTCGTTAATGGAGGTCGGGCCCAAGATTAGTGGTGAAGATGTTATCGAAAAGCTCAAGGATGATGGCGACTTCGATAAGCTCCGTCTCAAGATCATTCGCAAGCTGAAAGACAATGTATGTTCATTTTTATATTTCATTTCCATCTTGATTTCCTCTATTTCTTAGGTTTTTGTTCTTCATTTGATTTCTGCTTAGTATTTTTGTTAATTCTAATTCCAATAGTCAAAATTTTTATCTAATCGCATCTCTTTGTTGTGGAATTTGTTGATTCGTTTGAGCTATTAGTTCTTTCGTTCTTCCTGTTCCAAATTAAGCACATTTGTTCAGGGTATCAAGGGAGATAAATCGATGGTAGTATTTTTAGAAGTTCTATAAACATTGACGTTCTGTTGGATTTTGGGGTTTAATAGAAAATGTTTTTTTAACTGTAGGAAGAATTGCGCAATAATATAGTTGCAATAGTGAAGCAATCGGCAGCTCTTAATCGAGCAGGGGCTGAAAATGTAAAACCTCGGCAACTTTCTGATGCAATATTTGACGAGGTTGGGTAAGACCAAATTTCTGCTGTCCCATGTTCTTCATTGTTTCTTTTTGACATAATCATATTGTCATTATAGTGTACTTTCTCGAGTTCTCTAGCTAAAGTAGGTTGTGGAGTTCATATGAACTCTTCTTATAATGGGAGGTGAAAGGTTTATCTCATCCGGATCAACTCACATGAAGAAATTTCTACTTTGAAACTCTGTAAAATCCCCAAACCAAACAGAAAAATGCAAAAATCTCTATATATTATAAGAGACAAAAAATAAAATATCAAAGAACAAAATGTAGCGTGGGCGCTTGTTTGGGAGATTTGTAAGGAAAGAAATAGGAGGATCTTCGAGGATTAGTCTAATACTTTTGATATATTTCTTGCAATACTGTACAAATTATGTCTTCTTTGTAGTGACTTAGAAACAGGAAATTCTTTTGTGAGTATAGCCTAGCTCAAATCCTCCATAATTGAGAGGTTGTGCTTCATTAGTTTTTGTGTGGGAGGGAGCTTCTCGCCCCCTGCTCTTTGACTGTTGCTTTTTCTTGGTTTATAGATCTATCTCAACCAATGGACGAGCGAAAGCATACAAAACTACTCCCACCAAGCTACTTTGTAATGACCCAAGCCCACCGCTAGCCGATATTGTCTTGTTTGAGCTTTCCCTTTCGGGCTTCTCCTTAAGGTTTTTAAAACACGTCTATTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCCCAACTGATGCGGGATCTCACGTACTTCCAACATCAAAAACCTATTTTCAAGTCCACAAACTCCTTCACATGACTCTCATATAACCCTTCTGATGCCAATTCTTGAAATAAGTCAACTCCTCATCGTTACTACTAACACTAACATCAGAGTTATCATCAAATCCTTCTTCTTCTAAAGCGCATCTACTTCTTTTCTTGTTGATTAAATCGTTTCAAAAGATAGAGAAATACGCTCACTTGAGTTTGATGATTTCTCGAATTCTTGACTTAGCGAACTTTAAAAAACTCAGTGAATGAGTGACTTAAGTTATCTATGTTACAATCAAATATTTTGGATGCCTATGTTTGTTGTTTCCTTATTTTATTGTCCATACTAAAATTTTCTTTTGAAGAAAAGTAAAGTATCTACTGAGAGATAATAAGGTAATAATATATTTGCCTTGTCTTCAGGGATGAAATAATGAGCAAGGTTTCTGATAACTTATGGGAGATAATCAGATCAGATGATGGCATGAAAAATGAAATCACAGAAACTGTACAATCAATATACGATAACTTAGCGAACCCGAAAGCGAAGGAAGACGCCGAAGCATCCACCCACCATGCTATACCAGTTTGGAAGGAAGCTGACAACAATGGTTCTATGAAGGCCTCCACCAGTCAATCTGAACACACTGAGTCCAATCCTATAGAACCTTCAGGTTATTCTTTTGCTGGTAATCATACAAACAAGGAAAAACAACACGTAGATGAGCTGCAGTTTATTAAACGTGACAACGATAGTCGAAACGACATGTCTGATGCAGATAATGTCGATCCAGCACCAGGCTTTGTTTCAAACACGAAGCACAACCAAATGTGTATAGATGATGACAGCGATGAAGACCCAGATGTGCCCCCTGGTTTCGGTTGAAGAACTACATTTATGCAGTAACCAGTTCCTGAGCATTTTGCAACAAGTCTTCGGTCGAATCCTGTGCGACACAACAAGAAAGTCGGGACTAATCAACCGATCATTTCTTCTGCCATGGTTCATAATGTGATTACAATGTATCAAGTTTGTGTTCCATTTGGTAGAAAGCCACAAATTTAGAGAACTTCGACCAGATATCCAAACACACATGATTCTGCTATTATAAGTTAGTGTGAGCTTTCCTTGAACTTTAAAGTTTAAGCTAATAGCAAAAGTTTGTTTTTGGTGAAAAATCTTATATCTGAATAGGAATTTTCTTAAATTTTCTTTATTTTTAAGCCATTTTAAGACTAATTTATATTTAGATGACAACTATGATATTTACTTATTATTAGCCAACAATCATGTTTTCTTTTATTATTTTAATTAAAAAAAAAAGACTTTATTCTAAAGATATAGATGAAAATAATAATTATAAAAAATTTAACTATACTTCAAAGAAAATTTAAAAAAAAAATCCCACCGCTCAAATTTATAGAAATTTTAAAAAGATTATTATTTTGCAAAAGAAAAAAGATTTTGGTATATTGGGTGTGTTGTTTTTTGCCGTTTCGTTGACAAATGTTGAAAGAGAAAACAGCAACGAAGAGAATCGTTCTTAATGGCGTTTCTAAGGTCCGCAGCAACAACCACTAGCCTTGCCATAACAGCGTCTGCTCTATCTGCAGCTTTCATCTTCCCCAGCCCTTCTTCTTCTTCTCCTCCTCATTTTCATCTCCCTCAATCCTTCAAACCCATTTCCCTCTCTTTACATTCGTCTCGAAATTCCTCTGGATTTTCCCGAATCTCTGCCTATTCCCCCTCTACTGTTCCCATGGAGAAACCCACTTCGGAACCTATCTCCTCCTATCAGGTTTCCTCTGATTTCTTAAACCCATAGCTAATTTTACTGTTTTCTATCGTGTATCAGTTCTAATGCCCCTTAATTGCTTTCGATTGATGCAGAGCACCGTTGATTTGCCCGAACTTTTGGTGAGTCTAGTTCTTTGAATTCTTTTTCTCCTGATTTGTGTATTATCTTGAAGCTTTCTGGTTCATATTGGTGTAGTTTTCTAATGAGGATCTTTGTTGGTTAAATTGCTCAAGGGGTTGTTGTTTTGTTATGGTTTAATATGAGAATTCGAGTCTATGTTTGGAATTTACTTAGTTGATTGTGTTCGAGTGACAGACAGAGTTTATGGTGGATATGAAATGTGAGGGCTGCGTTAATGCCGTCAAGAACAAGTTACAGGGCGTTGATGGTAAGTGTTTTAGGTGAAGATTTATCTTATTTGATGTTCGTGTTTCATGTTTCAATTGATAATTGTTTCACCTTTTGGTTGGTTTATAACCTCTTGTTAACCTATGTTTGGGAGTTTTTTGGGCATTTTCATAGCTAAAAGCACTTCCCCCCAATTGTGAGTGCTTTCTTAGAGTATGAACCAAGTCTTAAAATGATTTCTCATTGAACACCTTTCACTAAACTGCTTGTAATTAAACTAATTCTACCAATAGCATCCTCATTCATGTTTTGTATACTAGTTCCAAAACTTTAAACTGTTGTTTCAGGCGTGAAGAGTGTTGATGTGGACTTGAGCAATCAAGTGGTTAGGATACTGGGTACAACACCTGTGAAGACAATGACTGAAGCTTTGGAGCAGACGGGTCGAAAAACCCGGTTAATTGGGCAAGGGGTTCCTGAGGGTACGTTGAATTAAACCCGCCCTCTCTCTTTTTCTGAATCTGATACTTAGCTGTTAAGATGATAAAAGCTTCTTTGAGTTCTTTAGATTTCTGAATGTTTTATCAAGTTCTATGTTGCTTCTGGAAACCATTTGAATTTATAGGTAAAAACACAAGGTGAGGACAAAGGAGAGCCATCGAAATGTAGAATATAAATTATCAGAACTTGATCTTGTTCTGAATCAATAAAGAAGGAAAATCAAAATAGAACTTGGTTGAAATAGTTTAAGGGGTGGGTTAAAAGTGAGCCGAACCCCAAATCTCCTGCGAATTCCTCTCTATATCCACAAATCTTCTGGTTCCTTTCTGGCTAAGGGCATCCTCCATCGTGTTATGACGAATCTCGATTTTTGGACTGGTGGGCAACAATAATCCGATGAAACTTTCACCGAATCTTTTGAGGGAAAAACAAGTCCAAAGGATGGGATTTAAATTTTTTGAAGTATGCCCTTACATAACACACCATTGTGGATTAAGAACCTAAGGAGGACATGTGAATAGATTCAATGGGGTTATTCGAGATTTTAGCCGTCCACATTCAACGTGATTATATGCTTTTTGGAAATCAATTTGAAGATGATAGCCCTCCACTTTACTAGCCCTAAATTCTCTGTGCTATCATTTGTAATCAAATCTTTGTTGAGTATTTGTCTACTCAATGGAAAATCATCTTGAGTCTCGGAGATGGTACATGACAACGTTGTTTAACCTATTCGCCAGAAAGGGGTGCTAGGGTTATTGAAAATGGTATAGGTCGATTCCTTTTCAATCCATTTGTTATGACCTAGACCATCATTCGGTGCTATCTGATGACTGCATTAACAAATCGAAAACATAGGCATTTTGACTCTCGGGAGAAATATGACAGTTTCATCTCCAGTTCATTTTCTAAGCCTATTGGGTCAAACTGGGATTAGAGCACGTGGCTACGAACCACGGTGTCAGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAAGGGAAGGACTTTCCTTTTTGGGTAGGAAGGTGTTGAGAGCGTATGTTGTTTGTAGATCAAGAGTAGGTTCTTGGACTGGCCCCCTTCGCATGACCTAGAAAGAAAAATCAATCCGTGACAGCCAATCAAAAATATCACCAAATCTCCCGCCCTCTGGGGATGCCCTCAGCGTCGAGGAACATGTACCTTTTTAAGTTGCTGAGTTTGTATATAGAGAATTATGAAGAACATGACAAACACTAAGAAGCATCCAGTCTATTTCGAAAAGGCTGGTAACCTCTCCTCCACAAACATAGTTCTATACAAAAGAAAGCCTGCCTACCCAAAGCACTCCCCTCTAATATCTAGTCCTCATGCCCACACCAACCACCCGACTTCCCCACGAGCTAATTTTCTGGTGCTTATTTCCCTTACTACCCCTCCTAGTGTACGTATGTCAAATTAGAGGCCTAACAGAGAATACGATAAAGCATGCACGTGACGGGAAACTGGTGTGGTTTGGATGAAACATATCTCTTTGGCACTTTAATTCGAACAATTCTTTAATGATCCGTTTCTTTTGTTAATAACTAGTTGAGAGCCCATCTTAGTTCTCTCTAGTTCTGGATTGGATCTGGACGCCAAGTCTCCCCTTTCTCTTGTAATTCCTTTTGTTAGATTGTTTGGGTTTTTTTAAAAGAGGAATCTGATTGACCCGTTGAAAGAATAGGAGTGAGAAAGTTATTAATCTGATAAACCACTGCCCTCTCTTTGCAGATTTCTTAGTTTCTGCTGCTGTCTCCGAATTTAAAGGCCCGAATATATTTGGCGTGGTTCGATTGGCTCAAGTAAGTATGGAACTAGCCAGGGTTGAAGCCAATTTTAGTGGATTGTCACCTGGAAAACATGGTTGGTCAATCAATGAATTTGGTGACCTGACTAGAGGTGCTGCTAGCACAGGGAAAGTGTTTGATTCTGCAGATTCTGGCCCTAGTAATGAGGTTAACTTTCAACTTATAGCTTTTGAAGTCATTCCTTTTCCTGTTCATCCATAAATTTCATATGCCTGTTCATAGAGACCATGCTTCTGCTGTTGTTTTTTTGTTAGTGTCTGGGATGATTAGTGTAAACTTGTAACCAGCAATAGGTCTGTTCATGAGCATATTATAATTGTTGTCGGGTCTCGGGTTTAGTTTCGATCTAGTCCTACAATTTGGTTAAACCTCACGAATCTTTCGAAATCGGTTTTGAACCTATTTGAAAACATCTTCCCTTTCCTCTAGTTTAATCCTACCCTAAACCATCAAACCATACTAAGCAACTTGACATGATTTCTATGTGGTTATGAGTCTCTGAAAGATTAATATAGTGTCACAATGTATTTTCAGCCATTGGGCGACCTGGGAACATTAGAGGCCGATGAAAATGGCGAAGCGTTTTTCTCTGGTGTGAAACAGAACCTGCGTGTGTGTGATCTCATCGGACGATCGATAGCGGTGTATGAGACCGAAGATAAATCAGTTCCGGGCATCGCAGCAGCAGTAGTAGCTCGAAGCGCGGGTGTCGGAGAGAACTACAAGAAGCTATGCACCTGTGATGGGACTACCATATGGGAATCAAGTGACAGGGATTTTGTCACCAGCAAAGTCTAATAAGGGCATCTAGAAGGAAGCTAAGATCCATCATTCTCATGTAAGATTTTGTGTTTGGAACCTATATTTCACCTTTGTTTACTATTCGGAGCCGGAATAAATCTTGGAAAGGTCTGGTCGTAGTTGGAAAGTTATGAGATGGGTTAACATTTACGACGACTTGATTAAAGACCAAGTTGTCTTGGTAATAAGAGACGACGATAAAGATAAATAGGTCAAAATTATGAATTTCGATATCGAGTCTTGGACGTGTAGATTTCTTAATCGAGTTAAACTTAAAGAATATGAATA

mRNA sequence

CAGCATAACAATACCTACAGTACCTCTGAAGCTGGGAAGAATCTCGCTGGTCGTCGTTAATGGAGGTCGGGCCCAAGATTAGTGGTGAAGATGTTATCGAAAAGCTCAAGGATGATGGCGACTTCGATAAGCTCCGTCTCAAGATCATTCGCAAGCTGAAAGACAATGAAGAATTGCGCAATAATATAGTTGCAATAGTGAAGCAATCGGCAGCTCTTAATCGAGCAGGGGCTGAAAATGTAAAACCTCGGCAACTTTCTGATGCAATATTTGACGAGGTTGGGGATGAAATAATGAGCAAGGTTTCTGATAACTTATGGGAGATAATCAGATCAGATGATGGCATGAAAAATGAAATCACAGAAACTGTACAATCAATATACGATAACTTAGCGAACCCGAAAGCGAAGGAAGACGCCGAAGCATCCACCCACCATGCTATACCAGTTTGGAAGGAAGCTGACAACAATGGTTCTATGAAGGCCTCCACCAGTCAATCTGAACACACTGAGTCCAATCCTATAGAACCTTCAGGTTATTCTTTTGCTGGTAATCATACAAACAAGGAAAAACAACACGTAGATGAGCTGCAGTTTATTAAACGTGACAACGATAGTCGAAACGACATGTCTGATGCAGATAATGTCGATCCAGCACCAGGCTTTGTTTCAAACACGAAGCACAACCAAATGTGTATAGATGATGACAGCGATGAAGACCCAGATGTGCCCCCTGGTTTCGCTAATTTTACTGTTTTCTATCGTGTATCAGTTCTAATGCCCCTTAATTGCTTTCGATTGATGCAGAGCACCGTTGATTTGCCCGAACTTTTGTTTTCTAATGAGGATCTTTGTTGGTTAAATTGCTCAAGGGGTTGTTGTTTTGTTATGACAGAGTTTATGGTGGATATGAAATGTGAGGGCTGCGTTAATGCCGTCAAGAACAAGTTACAGGGCGTTGATGGCGTGAAGAGTGTTGATGTGGACTTGAGCAATCAAGTGGTTAGGATACTGGGTACAACACCTGTGAAGACAATGACTGAAGCTTTGGAGCAGACGGGTCGAAAAACCCGGTTAATTGGGCAAGGGGTTCCTGAGGATTTCTTAGTTTCTGCTGCTGTCTCCGAATTTAAAGGCCCGAATATATTTGGCGTGGTTCGATTGGCTCAAGTAAGTATGGAACTAGCCAGGGTTGAAGCCAATTTTAGTGGATTGTCACCTGGAAAACATGGTTGGTCAATCAATGAATTTGGTGACCTGACTAGAGGTGCTGCTAGCACAGGGAAAGTGTTTGATTCTGCAGATTCTGGCCCTAGTAATGAGCCATTGGGCGACCTGGGAACATTAGAGGCCGATGAAAATGGCGAAGCGTTTTTCTCTGGTGTGAAACAGAACCTGCGTGTGTGTGATCTCATCGGACGATCGATAGCGGTGTATGAGACCGAAGATAAATCAGTTCCGGGCATCGCAGCAGCAGTAGTAGCTCGAAGCGCGGGTGTCGGAGAGAACTACAAGAAGCTATGCACCTGTGATGGGACTACCATATGGGAATCAAGTGACAGGGATTTTGTCACCAGCAAAGTCTAATAAGGGCATCTAGAAGGAAGCTAAGATCCATCATTCTCATGTAAGATTTTGTGTTTGGAACCTATATTTCACCTTTGTTTACTATTCGGAGCCGGAATAAATCTTGGAAAGGTCTGGTCGTAGTTGGAAAGTTATGAGATGGGTTAACATTTACGACGACTTGATTAAAGACCAAGTTGTCTTGGTAATAAGAGACGACGATAAAGATAAATAGGTCAAAATTATGAATTTCGATATCGAGTCTTGGACGTGTAGATTTCTTAATCGAGTTAAACTTAAAGAATATGAATA

Coding sequence (CDS)

ATGGAGGTCGGGCCCAAGATTAGTGGTGAAGATGTTATCGAAAAGCTCAAGGATGATGGCGACTTCGATAAGCTCCGTCTCAAGATCATTCGCAAGCTGAAAGACAATGAAGAATTGCGCAATAATATAGTTGCAATAGTGAAGCAATCGGCAGCTCTTAATCGAGCAGGGGCTGAAAATGTAAAACCTCGGCAACTTTCTGATGCAATATTTGACGAGGTTGGGGATGAAATAATGAGCAAGGTTTCTGATAACTTATGGGAGATAATCAGATCAGATGATGGCATGAAAAATGAAATCACAGAAACTGTACAATCAATATACGATAACTTAGCGAACCCGAAAGCGAAGGAAGACGCCGAAGCATCCACCCACCATGCTATACCAGTTTGGAAGGAAGCTGACAACAATGGTTCTATGAAGGCCTCCACCAGTCAATCTGAACACACTGAGTCCAATCCTATAGAACCTTCAGGTTATTCTTTTGCTGGTAATCATACAAACAAGGAAAAACAACACGTAGATGAGCTGCAGTTTATTAAACGTGACAACGATAGTCGAAACGACATGTCTGATGCAGATAATGTCGATCCAGCACCAGGCTTTGTTTCAAACACGAAGCACAACCAAATGTGTATAGATGATGACAGCGATGAAGACCCAGATGTGCCCCCTGGTTTCGCTAATTTTACTGTTTTCTATCGTGTATCAGTTCTAATGCCCCTTAATTGCTTTCGATTGATGCAGAGCACCGTTGATTTGCCCGAACTTTTGTTTTCTAATGAGGATCTTTGTTGGTTAAATTGCTCAAGGGGTTGTTGTTTTGTTATGACAGAGTTTATGGTGGATATGAAATGTGAGGGCTGCGTTAATGCCGTCAAGAACAAGTTACAGGGCGTTGATGGCGTGAAGAGTGTTGATGTGGACTTGAGCAATCAAGTGGTTAGGATACTGGGTACAACACCTGTGAAGACAATGACTGAAGCTTTGGAGCAGACGGGTCGAAAAACCCGGTTAATTGGGCAAGGGGTTCCTGAGGATTTCTTAGTTTCTGCTGCTGTCTCCGAATTTAAAGGCCCGAATATATTTGGCGTGGTTCGATTGGCTCAAGTAAGTATGGAACTAGCCAGGGTTGAAGCCAATTTTAGTGGATTGTCACCTGGAAAACATGGTTGGTCAATCAATGAATTTGGTGACCTGACTAGAGGTGCTGCTAGCACAGGGAAAGTGTTTGATTCTGCAGATTCTGGCCCTAGTAATGAGCCATTGGGCGACCTGGGAACATTAGAGGCCGATGAAAATGGCGAAGCGTTTTTCTCTGGTGTGAAACAGAACCTGCGTGTGTGTGATCTCATCGGACGATCGATAGCGGTGTATGAGACCGAAGATAAATCAGTTCCGGGCATCGCAGCAGCAGTAGTAGCTCGAAGCGCGGGTGTCGGAGAGAACTACAAGAAGCTATGCACCTGTGATGGGACTACCATATGGGAATCAAGTGACAGGGATTTTGTCACCAGCAAAGTCTAA

Protein sequence

MEVGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKQSAALNRAGAENVKPRQLSDAIFDEVGDEIMSKVSDNLWEIIRSDDGMKNEITETVQSIYDNLANPKAKEDAEASTHHAIPVWKEADNNGSMKASTSQSEHTESNPIEPSGYSFAGNHTNKEKQHVDELQFIKRDNDSRNDMSDADNVDPAPGFVSNTKHNQMCIDDDSDEDPDVPPGFANFTVFYRVSVLMPLNCFRLMQSTVDLPELLFSNEDLCWLNCSRGCCFVMTEFMVDMKCEGCVNAVKNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGPSNEPLGDLGTLEADENGEAFFSGVKQNLRVCDLIGRSIAVYETEDKSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWESSDRDFVTSKV

Homology

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BLAST of CmoCh06G007570 vs. ExPASy Swiss-Prot
Match: Q9LD47 (Copper chaperone for superoxide dismutase, chloroplastic/cytosolic OS=Arabidopsis thaliana OX=3702 GN=CCS PE=1 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 7.5e-97
Identity = 171/234 (73.08%), Postives = 205/234 (87.61%), Query Frame = 0


Query: 276 VMTEFMVDMKCEGCVNAVKNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGR 335
           ++TEFMVDM CEGCVNAVKNKL+ ++G++ V+VDLSNQVVRILG++PVK MT+ALEQTGR
Sbjct: 87  LLTEFMVDMTCEGCVNAVKNKLETIEGIEKVEVDLSNQVVRILGSSPVKAMTQALEQTGR 146

Query: 336 KTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSIN 395
           K RLIGQGVP+DFLVSAAV+EFKGP+IFGVVR AQVSMELAR+EANF+GLSPG H W IN
Sbjct: 147 KARLIGQGVPQDFLVSAAVAEFKGPDIFGVVRFAQVSMELARIEANFTGLSPGTHSWCIN 206

Query: 396 EFGDLTRGAASTGKVFDSADSGPSNEPLGDLGTLEADENGEAFFSGVKQNLRVCDLIGRS 455
           E+GDLT GAASTG +++        EPLGDLGTLEAD+NGEAF+SG K+ L+V DLIGR+
Sbjct: 207 EYGDLTNGAASTGSLYNPFQDQTGTEPLGDLGTLEADKNGEAFYSGKKEKLKVADLIGRA 266

Query: 456 IAVYETED-KSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWESSDRDFVTSKV 509
           + VY+T+D KS PG+ AAV+ARSAGVGENYKKLC+CDGT IWE+++ DFV SKV
Sbjct: 267 VVVYKTDDNKSGPGLTAAVIARSAGVGENYKKLCSCDGTVIWEATNSDFVASKV 320

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BLAST of CmoCh06G007570 vs. ExPASy Swiss-Prot
Match: Q7XTY9 (Copper chaperone for superoxide dismutase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CCS PE=2 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.9e-92
Identity = 171/224 (76.34%), Postives = 194/224 (86.61%), Query Frame = 0


Query: 276 VMTEFMVDMKCEGCVNAVKNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGR 335
           +MTEFMVDMKC+GCV AVKNK Q ++G+K+++VDL+NQVVR+LG+ PV TM + L QTGR
Sbjct: 90  LMTEFMVDMKCDGCVTAVKNKFQTLEGIKNIEVDLNNQVVRVLGSLPVNTMLDTLHQTGR 149

Query: 336 KTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSIN 395
             RLIGQG P DFLVSAAV+EFKGP IFGVVRLAQV+MELA VEA FSGLSPGKHGWSIN
Sbjct: 150 DARLIGQGNPNDFLVSAAVAEFKGPVIFGVVRLAQVNMELAIVEATFSGLSPGKHGWSIN 209

Query: 396 EFGDLTRGAASTGKVFDSADSGPSNEPLGDLGTLEADENGEAFFSGVKQNLRVCDLIGRS 455
           EFGDLTRGA STGKV++ +D   SN+PLGDLGTLEA E GEA FS  K+ L+V DLIGRS
Sbjct: 210 EFGDLTRGAESTGKVYNPSDY-RSNKPLGDLGTLEAGEKGEAQFSASKEKLKVVDLIGRS 269

Query: 456 IAVYETEDKSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWESS 500
           IA+Y TED+S PGIAAAV+ARSAGVGENYKKLCTCDG TIWESS
Sbjct: 270 IALYATEDRSDPGIAAAVIARSAGVGENYKKLCTCDGVTIWESS 312

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BLAST of CmoCh06G007570 vs. ExPASy Swiss-Prot
Match: Q9WU84 (Copper chaperone for superoxide dismutase OS=Mus musculus OX=10090 GN=Ccs PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.5e-38
Identity = 97/243 (39.92%), Postives = 138/243 (56.79%), Query Frame = 0


Query: 279 EFMVDMKCEGCVNAVKNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRKTR 338
           EF V M C+ CV+AV   L+GV GV++VDV L NQ+V +  T P + +   LE TGR+  
Sbjct: 15  EFAVQMSCQSCVDAVHKTLKGVAGVQNVDVQLENQMVLVQTTLPSQEVQALLESTGRQAV 74

Query: 339 LIGQGVPEDFLVSAAVSEFKG-PNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSINEF 398
           L G G  +   + AAV+  +G  +I GVVR  Q+S EL  +E    GL PG HG  ++++
Sbjct: 75  LKGMGSSQLQNLGAAVAILEGCGSIQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQY 134

Query: 399 GDLTRGAASTGKVFD---SADSGP--SNEPLGDLGTLEADENGEAFFSGVKQNLRVCDLI 458
           GDLTR   S G  F+   ++  GP  ++   GDLG + A+  G A F    + L+V D+I
Sbjct: 135 GDLTRDCNSCGDHFNPDGASHGGPQDTDRHRGDLGNVRAEAGGRATFRIEDKQLKVWDVI 194

Query: 459 GRSIAVYETED--------------KSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWES 502
           GRS+ + E ED               S   +A  ++ARSAG+ +N K++C+CDG TIWE 
Sbjct: 195 GRSLVIDEGEDDLGRGGHPLSKITGNSGKRLACGIIARSAGLFQNPKQICSCDGLTIWEE 254

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BLAST of CmoCh06G007570 vs. ExPASy Swiss-Prot
Match: Q6PWT7 (Copper chaperone for superoxide dismutase OS=Sus scrofa OX=9823 GN=CCS PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 7.9e-38
Identity = 98/245 (40.00%), Postives = 135/245 (55.10%), Query Frame = 0


Query: 277 MTEFMVDMKCEGCVNAVKNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRK 336
           M EF V M C+ CV+AV   LQGV G++SV+V L NQ+V +  T P + +   LE TGR+
Sbjct: 13  MLEFAVQMTCQSCVDAVSRSLQGVAGIQSVEVQLENQMVLVQTTLPSQVVQALLEDTGRQ 72

Query: 337 TRLIGQGVPEDFLVSAAVSEFKGPN-IFGVVRLAQVSMELARVEANFSGLSPGKHGWSIN 396
             L G G      + AAV+   G   + GVVR  Q++ E   +E    GL PG HG  ++
Sbjct: 73  AVLKGMGSGRWQNLEAAVAILGGSGPVQGVVRFLQLTPERCLIEGTIDGLKPGLHGLHVH 132

Query: 397 EFGDLTRGAASTGKVFD---SADSGP--SNEPLGDLGTLEADENGEAFFSGVKQNLRVCD 456
           +FGDLTR   S G  F+    +  GP  S+   GDLG + AD +G A F    + L+V D
Sbjct: 133 QFGDLTRNCNSCGDHFNPDGMSHGGPQDSDRHRGDLGNVCADADGRAVFRMEDELLKVWD 192

Query: 457 LIGRSIAVYETED--------------KSVPGIAAAVVARSAGVGENYKKLCTCDGTTIW 502
           +IGRS+ + E ED               S   +A  ++ARSAG+ +N K++C+CDG TIW
Sbjct: 193 VIGRSLVIDEGEDDLGRGGHPLSKITGNSGERLACGIIARSAGLFQNPKQICSCDGLTIW 252

[Close]

BLAST of CmoCh06G007570 vs. ExPASy Swiss-Prot
Match: O14618 (Copper chaperone for superoxide dismutase OS=Homo sapiens OX=9606 GN=CCS PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.8e-37
Identity = 95/243 (39.09%), Postives = 136/243 (55.97%), Query Frame = 0


Query: 279 EFMVDMKCEGCVNAVKNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRKTR 338
           EF V M C+ CV+AV+  LQGV GV+ V+V L +Q+V +  T P + +   LE TGR+  
Sbjct: 15  EFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAV 74

Query: 339 LIGQGVPEDFLVSAAVSEFKGP-NIFGVVRLAQVSMELARVEANFSGLSPGKHGWSINEF 398
           L G G  +   + AAV+   GP  + GVVR  Q++ E   +E    GL PG HG  ++++
Sbjct: 75  LKGMGSGQLQNLGAAVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQY 134

Query: 399 GDLTRGAASTGKVFD---SADSGP--SNEPLGDLGTLEADENGEAFFSGVKQNLRVCDLI 458
           GDLT    S G  F+   ++  GP  S+   GDLG + AD +G A F    + L+V D+I
Sbjct: 135 GDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVWDVI 194

Query: 459 GRSIAVYETED--------------KSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWES 502
           GRS+ + E ED               S   +A  ++ARSAG+ +N K++C+CDG TIWE 
Sbjct: 195 GRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGIIARSAGLFQNPKQICSCDGLTIWEE 254

[Close]

BLAST of CmoCh06G007570 vs. ExPASy TrEMBL
Match: M4EDV8 (HMA domain-containing protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 2.0e-137
Identity = 282/527 (53.51%), Postives = 358/527 (67.93%), Query Frame = 0


Query: 6   KISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKQSAALNRAGAENVKPRQ 65
           KIS E+VIEKLKDDGDFD LRLKIIR+LKDNEELRN ++++VK+S ALNR  A+ +K RQ
Sbjct: 9   KISKEEVIEKLKDDGDFDSLRLKIIRRLKDNEELRNKMISVVKESRALNRPDAQTMKTRQ 68

Query: 66  LSDAIFDEVGDEIMSKVSDNLWEIIRSDDGMKNEITETVQSIYDNLANPKAKEDAEASTH 125
           LSDAIF EVG +++S++SD LW IIRS+DGMKNEI +TVQS+Y  L+NP   ++      
Sbjct: 69  LSDAIFQEVGSKMLSQLSDGLWGIIRSEDGMKNEIRDTVQSVYTTLSNPGGVQE------ 128

Query: 126 HAIPVWKEADNNGSMKASTSQSEHTESNPIEPSGYSFAGNHTNKEKQHVDELQFIKRDND 185
                         +K ST +SEH   N    S     GN      +   EL +++ +  
Sbjct: 129 --------------VKPSTRESEH---NIPTSSSLLHLGNEFGPSSKQKQELIYVQENKG 188

Query: 186 SRNDMSDADNVDPAPGFVSNTKHNQMCIDDDSDEDPDVPPGFANFTVFYRVSVLMPLNCF 245
                S  +N       VS T HN   I+ D DEDP++PP  A  T    + + +  +  
Sbjct: 189 EAACSSSTNN------RVSYTDHNNN-INCDDDEDPELPP-VATTTAASAIPIAIAFSSS 248

Query: 246 RLMQSTVDLPELL-FSNEDLCWLNCSRGCCF----------------------VMTEFMV 305
                T   P+ L FS      L  +R                          ++TEFMV
Sbjct: 249 SSSSPTNPNPQSLNFSRPSPRGLGLARSFASSPMTTVPASDSNLSQEDGVMPQLLTEFMV 308

Query: 306 DMKCEGCVNAVKNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQ 365
           +MKCEGCVNAVK+KL+ ++G++ VDVDL+NQVVRILG++PVKTM++ALEQTGRK RLIGQ
Sbjct: 309 NMKCEGCVNAVKSKLETIEGIEKVDVDLANQVVRILGSSPVKTMSQALEQTGRKARLIGQ 368

Query: 366 GVPEDFLVSAAVSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSINEFGDLTR 425
           GVP+DFLVSAAV+EFKGP+IFGVVR AQVSMELAR+EANF+GLSPG H WSINE+GDLT 
Sbjct: 369 GVPQDFLVSAAVAEFKGPDIFGVVRFAQVSMELARIEANFTGLSPGNHSWSINEYGDLTN 428

Query: 426 GAASTGKVFDSADSGPSNEPLGDLGTLEADENGEAFFSGVKQNLRVCDLIGRSIAVYETE 485
           GAASTG +++  +     EPLGDLGTLEAD++GEAF+SG K+ L+V DLIGR++ VY+TE
Sbjct: 429 GAASTGNLYNPFEDHTITEPLGDLGTLEADQSGEAFYSGKKEKLKVADLIGRAVVVYKTE 488

Query: 486 DKSV-PGIAAAVVARSAGVGENYKKLCTCDGTTIWESSDRDFVTSKV 509
           DK + P + AAV+ARSAGVGENYKKLCTCDGT IWE+++ DF+TSKV
Sbjct: 489 DKKLGPRLTAAVIARSAGVGENYKKLCTCDGTVIWEATNSDFMTSKV 504

[Close]

BLAST of CmoCh06G007570 vs. ExPASy TrEMBL
Match: A0A3P5Y9A1 (HMA domain-containing protein OS=Brassica campestris OX=3711 GN=BRAA09T41728Z PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 8.0e-134
Identity = 282/532 (53.01%), Postives = 355/532 (66.73%), Query Frame = 0


Query: 6   KISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKQSAALNRAGAENVKPRQ 65
           KIS E+VIEKLKDDGDFD LRL+IIR+LKDNEELRN ++++VK+S ALN   A+ +K RQ
Sbjct: 11  KISKEEVIEKLKDDGDFDSLRLQIIRRLKDNEELRNKMISVVKESRALNEPDAQKMKTRQ 70

Query: 66  LSDAIFDEVGDEIMSKVSDNLWEIIRSDDGMKNEITETVQSIYDNLANPKAKEDAEASTH 125
           LSDAIF EVG +++S++SD LW IIRS+DGMK EI ETVQS+Y  L+NP   ++      
Sbjct: 71  LSDAIFQEVGSKMLSQLSDGLWGIIRSEDGMKKEIRETVQSVYTTLSNPGGVQEG----- 130

Query: 126 HAIPVWKEADNNGSMKASTSQSEHTESNPIEPSGYSFAGNHTNKEKQHVDELQFIKRDND 185
              P  +EA++N      TS S     N   PS         +K+KQ   EL +++ +  
Sbjct: 131 ---PSTREAEHN----IPTSSSLLHLGNEFGPS---------SKQKQ---ELIYVQENKG 190

Query: 186 SRNDMSDADNVDPAPGFVSNTKHNQMCIDDDSDEDPDVPPGFANFTVFYRVSVLMPLNCF 245
                S  +N       V  T HN   I+ D +EDP++PP           S +  LN  
Sbjct: 191 EAACSSSTNN------RVGYTDHNNN-INCDDEEDPELPPVATTTATVVAASAI--LNAI 250

Query: 246 RLMQSTVDLP------ELLFSNEDLCWLNCSRGCCF----------------------VM 305
               S+   P       L+FS      L  +R                          ++
Sbjct: 251 AFSSSSSSSPTNPKPQSLIFSRPSPRGLELARSFASSPMTTVPASDSNLSQEDGVMPQLL 310

Query: 306 TEFMVDMKCEGCVNAVKNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRKT 365
           TEFMVDMKCEGCVNAVK+KL+ ++G++ VDVDL+NQVVRILG++PVKTM++AL QTG K 
Sbjct: 311 TEFMVDMKCEGCVNAVKSKLETIEGIEKVDVDLANQVVRILGSSPVKTMSQALSQTGGKA 370

Query: 366 RLIGQGVPEDFLVSAAVSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSINEF 425
           RLIGQ VP+DFLV AAV+EFKGP+IFGVVR AQVSMELAR+EANF+GLSPG H WSINE+
Sbjct: 371 RLIGQAVPQDFLVPAAVAEFKGPDIFGVVRFAQVSMELARIEANFTGLSPGNHSWSINEY 430

Query: 426 GDLTRGAASTGKVFDSADSGPSNEPLGDLGTLEADENGEAFFSGVKQNLRVCDLIGRSIA 485
           GDLT GAASTG +++        EPLGDLGTLEAD++GEAF+SG K+ L+V DLIGR++ 
Sbjct: 431 GDLTNGAASTGNLYNPFQDHTITEPLGDLGTLEADQSGEAFYSGKKEKLKVADLIGRAVV 490

Query: 486 VYETED-KSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWESSDRDFVTSKV 509
           VY+TED KS PG+ AAV+ARSAGVGENYKKLCTCDGT IWE+++ DFVTSKV
Sbjct: 491 VYKTEDKKSGPGLTAAVIARSAGVGENYKKLCTCDGTVIWEATNSDFVTSKV 509

[Close]

BLAST of CmoCh06G007570 vs. ExPASy TrEMBL
Match: A0A6J1GCG2 (copper chaperone for superoxide dismutase, chloroplastic/cytosolic OS=Cucurbita moschata OX=3662 GN=LOC111452696 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 1.9e-127
Identity = 241/260 (92.69%), Postives = 241/260 (92.69%), Query Frame = 0


Query: 249 QSTVDLPELLFSNEDLCWLNCSRGCCFVMTEFMVDMKCEGCVNAVKNKLQGVDGVKSVDV 308
           QSTVDLPELL                   TEFMVDMKCEGCVNAVKNKLQGVDGVKSVDV
Sbjct: 84  QSTVDLPELL-------------------TEFMVDMKCEGCVNAVKNKLQGVDGVKSVDV 143

Query: 309 DLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRL 368
           DLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRL
Sbjct: 144 DLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRL 203

Query: 369 AQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGPSNEPLGDLGT 428
           AQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGPSNEPLGDLGT
Sbjct: 204 AQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGPSNEPLGDLGT 263

Query: 429 LEADENGEAFFSGVKQNLRVCDLIGRSIAVYETEDKSVPGIAAAVVARSAGVGENYKKLC 488
           LEADENGEAFFSGVKQNLRVCDLIGRSIAVYETEDKSVPGIAAAVVARSAGVGENYKKLC
Sbjct: 264 LEADENGEAFFSGVKQNLRVCDLIGRSIAVYETEDKSVPGIAAAVVARSAGVGENYKKLC 323

Query: 489 TCDGTTIWESSDRDFVTSKV 509
           TCDGTTIWESSDRDFVTSKV
Sbjct: 324 TCDGTTIWESSDRDFVTSKV 324

[Close]

BLAST of CmoCh06G007570 vs. ExPASy TrEMBL
Match: A0A6J1KZ99 (copper chaperone for superoxide dismutase, chloroplastic/cytosolic OS=Cucurbita maxima OX=3661 GN=LOC111498447 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 2.1e-126
Identity = 239/260 (91.92%), Postives = 240/260 (92.31%), Query Frame = 0


Query: 249 QSTVDLPELLFSNEDLCWLNCSRGCCFVMTEFMVDMKCEGCVNAVKNKLQGVDGVKSVDV 308
           QSTVDLPELL                   TEFMVDMKCEGCVNAVKNKLQGVDGVKSVDV
Sbjct: 85  QSTVDLPELL-------------------TEFMVDMKCEGCVNAVKNKLQGVDGVKSVDV 144

Query: 309 DLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRL 368
           DLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRL
Sbjct: 145 DLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRL 204

Query: 369 AQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGPSNEPLGDLGT 428
           AQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGPSNEPLGDLGT
Sbjct: 205 AQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGPSNEPLGDLGT 264

Query: 429 LEADENGEAFFSGVKQNLRVCDLIGRSIAVYETEDKSVPGIAAAVVARSAGVGENYKKLC 488
           LEADENGEAFFSGVKQ LRVCDLIGRSIAVYETEDKSVPG+AAAVVARSAGVGENYKKLC
Sbjct: 265 LEADENGEAFFSGVKQKLRVCDLIGRSIAVYETEDKSVPGMAAAVVARSAGVGENYKKLC 324

Query: 489 TCDGTTIWESSDRDFVTSKV 509
           TCDGTTIWESSDRDFVTSKV
Sbjct: 325 TCDGTTIWESSDRDFVTSKV 325

[Close]

BLAST of CmoCh06G007570 vs. ExPASy TrEMBL
Match: A0A2Z4GTA1 (Superoxide dismutase [Cu-Zn] 3 OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 3.6e-126
Identity = 238/260 (91.54%), Postives = 240/260 (92.31%), Query Frame = 0


Query: 249 QSTVDLPELLFSNEDLCWLNCSRGCCFVMTEFMVDMKCEGCVNAVKNKLQGVDGVKSVDV 308
           QSTVDLPELL                   TEFMVDMKCEGCVNAVKNKLQGVDGVKSVDV
Sbjct: 83  QSTVDLPELL-------------------TEFMVDMKCEGCVNAVKNKLQGVDGVKSVDV 142

Query: 309 DLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRL 368
           DLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRL
Sbjct: 143 DLSNQVVRILGTTPVKTMTEALEQTGRKTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRL 202

Query: 369 AQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGPSNEPLGDLGT 428
           AQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGPSNEPLGDLGT
Sbjct: 203 AQVSMELARVEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFDSADSGPSNEPLGDLGT 262

Query: 429 LEADENGEAFFSGVKQNLRVCDLIGRSIAVYETEDKSVPGIAAAVVARSAGVGENYKKLC 488
           +EA+ENGEAFFSGVKQNLRVCDLIGRSIAVYETEDKSVPGIA AVVARSAGVGENYKKLC
Sbjct: 263 IEANENGEAFFSGVKQNLRVCDLIGRSIAVYETEDKSVPGIAVAVVARSAGVGENYKKLC 322

Query: 489 TCDGTTIWESSDRDFVTSKV 509
           TCDGTTIWESSDRDFVTSKV
Sbjct: 323 TCDGTTIWESSDRDFVTSKV 323

[Close]

BLAST of CmoCh06G007570 vs. TAIR 10
Match: AT1G12520.1 (copper chaperone for SOD1 )

HSP 1 Score: 355.9 bits (912), Expect = 5.3e-98
Identity = 171/234 (73.08%), Postives = 205/234 (87.61%), Query Frame = 0


Query: 276 VMTEFMVDMKCEGCVNAVKNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGR 335
           ++TEFMVDM CEGCVNAVKNKL+ ++G++ V+VDLSNQVVRILG++PVK MT+ALEQTGR
Sbjct: 87  LLTEFMVDMTCEGCVNAVKNKLETIEGIEKVEVDLSNQVVRILGSSPVKAMTQALEQTGR 146

Query: 336 KTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSIN 395
           K RLIGQGVP+DFLVSAAV+EFKGP+IFGVVR AQVSMELAR+EANF+GLSPG H W IN
Sbjct: 147 KARLIGQGVPQDFLVSAAVAEFKGPDIFGVVRFAQVSMELARIEANFTGLSPGTHSWCIN 206

Query: 396 EFGDLTRGAASTGKVFDSADSGPSNEPLGDLGTLEADENGEAFFSGVKQNLRVCDLIGRS 455
           E+GDLT GAASTG +++        EPLGDLGTLEAD+NGEAF+SG K+ L+V DLIGR+
Sbjct: 207 EYGDLTNGAASTGSLYNPFQDQTGTEPLGDLGTLEADKNGEAFYSGKKEKLKVADLIGRA 266

Query: 456 IAVYETED-KSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWESSDRDFVTSKV 509
           + VY+T+D KS PG+ AAV+ARSAGVGENYKKLC+CDGT IWE+++ DFV SKV
Sbjct: 267 VVVYKTDDNKSGPGLTAAVIARSAGVGENYKKLCSCDGTVIWEATNSDFVASKV 320

[Close]

BLAST of CmoCh06G007570 vs. TAIR 10
Match: AT1G12520.2 (copper chaperone for SOD1 )

HSP 1 Score: 348.2 bits (892), Expect = 1.1e-95
Identity = 168/229 (73.36%), Postives = 200/229 (87.34%), Query Frame = 0


Query: 281 MVDMKCEGCVNAVKNKLQGVDGVKSVDVDLSNQVVRILGTTPVKTMTEALEQTGRKTRLI 340
           MVDM CEGCVNAVKNKL+ ++G++ V+VDLSNQVVRILG++PVK MT+ALEQTGRK RLI
Sbjct: 1   MVDMTCEGCVNAVKNKLETIEGIEKVEVDLSNQVVRILGSSPVKAMTQALEQTGRKARLI 60

Query: 341 GQGVPEDFLVSAAVSEFKGPNIFGVVRLAQVSMELARVEANFSGLSPGKHGWSINEFGDL 400
           GQGVP+DFLVSAAV+EFKGP+IFGVVR AQVSMELAR+EANF+GLSPG H W INE+GDL
Sbjct: 61  GQGVPQDFLVSAAVAEFKGPDIFGVVRFAQVSMELARIEANFTGLSPGTHSWCINEYGDL 120

Query: 401 TRGAASTGKVFDSADSGPSNEPLGDLGTLEADENGEAFFSGVKQNLRVCDLIGRSIAVYE 460
           T GAASTG +++        EPLGDLGTLEAD+NGEAF+SG K+ L+V DLIGR++ VY+
Sbjct: 121 TNGAASTGSLYNPFQDQTGTEPLGDLGTLEADKNGEAFYSGKKEKLKVADLIGRAVVVYK 180

Query: 461 TED-KSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWESSDRDFVTSKV 509
           T+D KS PG+ AAV+ARSAGVGENYKKLC+CDGT IWE+++ DFV SKV
Sbjct: 181 TDDNKSGPGLTAAVIARSAGVGENYKKLCSCDGTVIWEATNSDFVASKV 229

[Close]

BLAST of CmoCh06G007570 vs. TAIR 10
Match: AT1G12520.3 (copper chaperone for SOD1 )

HSP 1 Score: 279.6 bits (714), Expect = 4.9e-75
Identity = 135/184 (73.37%), Postives = 159/184 (86.41%), Query Frame = 0


Query: 326 MTEALEQTGRKTRLIGQGVPEDFLVSAAVSEFKGPNIFGVVRLAQVSMELARVEANFSGL 385
           MT+ALEQTGRK RLIGQGVP+DFLVSAAV+EFKGP+IFGVVR AQVSMELAR+EANF+GL
Sbjct: 1   MTQALEQTGRKARLIGQGVPQDFLVSAAVAEFKGPDIFGVVRFAQVSMELARIEANFTGL 60

Query: 386 SPGKHGWSINEFGDLTRGAASTGKVFDSADSGPSNEPLGDLGTLEADENGEAFFSGVKQN 445
           SPG H W INE+GDLT GAASTG +++        EPLGDLGTLEAD+NGEAF+SG K+ 
Sbjct: 61  SPGTHSWCINEYGDLTNGAASTGSLYNPFQDQTGTEPLGDLGTLEADKNGEAFYSGKKEK 120

Query: 446 LRVCDLIGRSIAVYETED-KSVPGIAAAVVARSAGVGENYKKLCTCDGTTIWESSDRDFV 505
           L+V DLIGR++ VY+T+D KS PG+ AAV+ARSAGVGENYKKLC+CDGT IWE+++ DFV
Sbjct: 121 LKVADLIGRAVVVYKTDDNKSGPGLTAAVIARSAGVGENYKKLCSCDGTVIWEATNSDFV 180

Query: 506 TSKV 509
            SKV
Sbjct: 181 ASKV 184

[Close]

BLAST of CmoCh06G007570 vs. TAIR 10
Match: AT1G12530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits to 53 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 163.7 bits (413), Expect = 3.9e-40
Identity = 98/227 (43.17%), Postives = 139/227 (61.23%), Query Frame = 0


Query: 1   MEVGPKISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKQSAALNRAGAEN 60
           M +  KIS E+V+EKLKDDGDFD+LRLKIIR+LK+NE+LRNN++++VK+S +L R GA+N
Sbjct: 2   MGMARKISKEEVVEKLKDDGDFDRLRLKIIRRLKENEDLRNNMISVVKESTSLKRHGAQN 61

Query: 61  VKPRQLSDAIFDEVGDEIMSKVSDNLWEIIRSDDGMKNEITETVQSIYDNLANPKAKEDA 120
           +K RQLSDAIF+EVG +++S++SD LW IIRS+DGMKNEI ETVQS+Y  L+NP+ ++  
Sbjct: 62  MKTRQLSDAIFEEVGSKMLSQLSDGLWGIIRSEDGMKNEIRETVQSVYATLSNPRGEKRG 121

Query: 121 EASTHHAIPVWKEADNNGSMKASTSQSEHTESNPIEPSGYSFAGNHTNKEKQHVDELQFI 180
                                 S  + EH    P + +   F  +  +K+KQ     + I
Sbjct: 122 ---------------------TSAREMEHKIPTPKKEARTDFNTSPASKQKQ-----ELI 181

Query: 181 KRDNDSRNDMSDADNVDPAPGFVSNTKHNQMCIDDDSDEDPDVPPGF 228
           K   +     + +D+V    G   N          D +EDP++PPGF
Sbjct: 182 KGAVEDNKGEACSDDVQDNKGEAYN----------DDEEDPELPPGF 192

[Close]

BLAST of CmoCh06G007570 vs. TAIR 10
Match: AT1G56420.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12530.1); Has 58 Blast hits to 58 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 1.5e-15
Identity = 50/151 (33.11%), Postives = 84/151 (55.63%), Query Frame = 0


Query: 7   ISGEDVIEKLKDDGDFDKLRLKIIRKLKDNEELRNNIVAIVKQSAALNRAGAENVKPRQL 66
           I  EDV+E L +DG  D LRL+II +LK NEEL++  + + ++S  LN  GAE    R+L
Sbjct: 7   IKPEDVLEHLMNDGTIDALRLRIINQLKANEELKSTTIKMAEESKVLNTPGAEKQTKREL 66

Query: 67  SDAIFDEVGDEIMSKVSDNLWEIIRSDDGMKNEITETVQSIYDNLANPKAKEDAEASTHH 126
            DA+  E+   ++ K S ++W++I   DG+  EI ETV+ ++ +L+  +    + ++   
Sbjct: 67  FDALRQELEGPVLEKASKSVWDLIIEKDGLGKEINETVERVFCHLSGQEPPFYSSSNVEK 126

Query: 127 A-IPVWKEADNNGSMKASTSQSEHTESNPIE 157
             + + KE +   S K    +   +E N  E
Sbjct: 127 TPMEIDKETEVKDSSKTKPKKRSLSEVNSSE 157

The following BLAST results are available for this feature:

BLAST of CmoCh06G007570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LD47	7.5e-97	73.08	Copper chaperone for superoxide dismutase, chloroplastic/cytosolic OS=Arabidopsi...	[more]
Q7XTY9	1.9e-92	76.34	Copper chaperone for superoxide dismutase, chloroplastic OS=Oryza sativa subsp. ...	[more]
Q9WU84	3.5e-38	39.92	Copper chaperone for superoxide dismutase OS=Mus musculus OX=10090 GN=Ccs PE=1 S...	[more]
Q6PWT7	7.9e-38	40.00	Copper chaperone for superoxide dismutase OS=Sus scrofa OX=9823 GN=CCS PE=2 SV=1	[more]
O14618	1.8e-37	39.09	Copper chaperone for superoxide dismutase OS=Homo sapiens OX=9606 GN=CCS PE=1 SV...	[more]

BLAST of CmoCh06G007570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
M4EDV8	2.0e-137	53.51	HMA domain-containing protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 S...	[more]
A0A3P5Y9A1	8.0e-134	53.01	HMA domain-containing protein OS=Brassica campestris OX=3711 GN=BRAA09T41728Z PE...	[more]
A0A6J1GCG2	1.9e-127	92.69	copper chaperone for superoxide dismutase, chloroplastic/cytosolic OS=Cucurbita ...	[more]
A0A6J1KZ99	2.1e-126	91.92	copper chaperone for superoxide dismutase, chloroplastic/cytosolic OS=Cucurbita ...	[more]
A0A2Z4GTA1	3.6e-126	91.54	Superoxide dismutase [Cu-Zn] 3 OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]

BLAST of CmoCh06G007570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12520.1	5.3e-98	73.08	copper chaperone for SOD1	[more]
AT1G12520.2	1.1e-95	73.36	copper chaperone for SOD1	[more]
AT1G12520.3	4.9e-75	73.37	copper chaperone for SOD1	[more]
AT1G12530.1	3.9e-40	43.17	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G56420.1	1.5e-15	33.11	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..56
None	No IPR available	GENE3D	3.30.70.100		coord: 276..339 e-value: 2.0E-16 score: 62.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..166
None	No IPR available	PANTHER	PTHR10003:SF86	COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE, CHLOROPLASTIC/CYTOSOLIC	coord: 251..508
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 280..336 e-value: 9.7E-12 score: 45.1
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 276..339 score: 12.808348
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 279..338 e-value: 4.37253E-14 score: 64.9345
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	GENE3D	2.60.40.200	Superoxide dismutase, copper/zinc binding domain	coord: 346..476 e-value: 5.7E-26 score: 93.0
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	SUPERFAMILY	49329	Cu,Zn superoxide dismutase-like	coord: 341..500
IPR001424	Superoxide dismutase, copper/zinc binding domain	PFAM	PF00080	Sod_Cu	coord: 360..464 e-value: 3.4E-17 score: 62.9
IPR024134	Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone	PANTHER	PTHR10003	SUPEROXIDE DISMUTASE CU-ZN -RELATED	coord: 251..508
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 277..339

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G007570.1	CmoCh06G007570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0006801	superoxide metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0004784	superoxide dismutase activity
molecular_function	GO:0016532	superoxide dismutase copper chaperone activity
molecular_function	GO:0046872	metal ion binding