CmoCh06G000730 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G000730
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Cmo_Chr06: 453994 .. 456191 (+)
RNA-Seq Expression	CmoCh06G000730
Synteny	CmoCh06G000730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCTGCGGAGCTTCTGTTTGTACTTTCATGTCAAAGATCTATTACTCTCTCCCATCTACACATTCTCCCGCCGAATATCTATTTCTCCATCATCCAACTTGAAAACACTGTGTTCCAATGGCCAATTGAATGAAGCATTGCTGCAAATGGCAATTTTGGGCTCTGAAATGAAGTTCGAAGGTTACGATACGATCTTGAACCAATGCGTTAGCCAAAGGGCTATTAGAGAAGGCCAAAGAGTTCATGCCCATATGATCAAAACTTGTTATTTGCCTCCGGTTTACCTCAGGACGAGGCTGATTGTGTTGTACAACAAGTGCGATTGTTTGGGTGATGCACGGGAAGTGTTCGATGAAATGCCCCTCAGAAATGTGGTTTCTTGGACCGCGATGATTTCGGCTTATTCGCAGAGAGGGTTTGCCTCTCAAGCCTTGAATCTCTTTGTGGCAATGTTAAGATCAGGTACTCATTTCTTTTTCCCGTTCTATTGTGAGATGTATAATCTGGTTTCCTTTCCTTTAGATTTGGCTTTTTGTACTTTTGTTTTATGGATTAAGAGAGTTTCTACGGATACTCTGTTACTCGAGGGGCCCCAAAAAGATTGAACTCCCTCTTCTAGAATTTTAATGACAGATTAGGAATATTATTGGGATGAATCTTAGAAATTAAAGAATTGCATATTGATTAACTTACCCTATTGTCTCGAATCACATTTAACATGTTAATGATAAAAAAGGTCATTTTTTCAGGTACAGAACCAAACGAGTTCACTTTTGCTACCATACTTACTTCTTGCATAGGTAGTTTGGGATTTCAAATTGGTAGACAAATTCATTCCATCGTCATTAAAAGAAACTATGAGTCCCATATGTTTGTTGGAAGTTCACTTCTTGATATGTATGCAAAGTCTGGGAGAGTCCATGAAGCTCATGGAGTTTTCCAAAGCTTGCCCGAACGAGATGTCGTTGTGTGTACTGCTATCATCTCTGGCTATGCTCAAATGGGTCTTGATGTAGAAGCATTGAAGCTATTCCGTCAGCTCCAAAGTGAAGGAATGCATTCAAATTATGTAACTTATGCTAGTGTCTTAACTGCTCTATCCGGACTTGCTGCGCTAAATCATGGCAAGCAGGTCCACAACCATGTCCTTCGGTCTGGACAGTCTTTGAATGTGGTTCTCCTGAATTCTCTAATCGATATGTACTCAAAATGCGGTAACGTCTGCTACGCTAGGAGGATTTTCGATCACATGTCTGAGAGAACTTGTATATCATGGAATGCGATGCTCGTTGGATATAGTAAACATGGCATGGGGGGAGAGGTGCTCGAACTTTTTAAATTGATGAGAGAAGAAAATAAAGTTAAACCTGACAGCATCACGTATTTGGCTGTTTTATCTGGTTGTAGTCATGGACAACTAGAACATAAGGGGCTTGAAATATTTTACAACATGGCTGATGGAAAGGATGGGATTGAACCAGATATTGAGCATTATGGTTGTGTTGTTGATTTACTTGGACGTGTTGGCAGAATAGAAGAGGCTTTTGATTTTATAAGAAAGATGCCTTATGTGCCAACGGCTGCTATTTGGGGATCGCTGTTAGGTTCGTGTCGAGTCCACTCGAACGTCGACATCGGCATAATTGTGGGTCAGAAGCTTCTAGAAATAGAGCCTGAGAATGCAGGTAACTATGTTATTCTCTCAAATTTGCATGCTTCTGCAGGCAAATGGGAAGATATGAGAAATATAAGGGACCTGATGCAAGAGAAAGCTGTGATAAAGGAGCCAGGTCGCAGTTGGGTAGAGCTTGATCAGATTGTTCATACGTTCCATGCAAGTGATCACACTCATCCAAGAAGGGAGGAGGTGGCGAGGAAGGTGAAAGAATTAGCCATTAAATTCAAGGAAGAGGGTTATGTTCCTAACTTGAGTTGTGTGTTGTATGATGTGGATGAAGAACAGAAAGAGAAGGTACTTCTAGGCCACAGTGAAAAGCTAGCTATGGCATTTTGGTTGATTGCTGCTCCTGAAGGAGCAACGATCCGAGTCATAAAAAACCTCCGAGTTTGCGTCGATTGCCATAGTTTTGCCAAATTTGTGTCGAAGCTTTACGCAAGAACGATAATCCTAAGGGACAAAAACCGGTTCCATAATATAGTTGGGGGAATATGTTCTTGTGGAGATTACTGGTAA

mRNA sequence

ATGCTGCTGCGGAGCTTCTGTTTGTACTTTCATGTCAAAGATCTATTACTCTCTCCCATCTACACATTCTCCCGCCGAATATCTATTTCTCCATCATCCAACTTGAAAACACTGTGTTCCAATGGCCAATTGAATGAAGCATTGCTGCAAATGGCAATTTTGGGCTCTGAAATGAAGTTCGAAGGTTACGATACGATCTTGAACCAATGCGTTAGCCAAAGGGCTATTAGAGAAGGCCAAAGAGTTCATGCCCATATGATCAAAACTTGTTATTTGCCTCCGGTTTACCTCAGGACGAGGCTGATTGTGTTGTACAACAAGTGCGATTGTTTGGGTGATGCACGGGAAGTGTTCGATGAAATGCCCCTCAGAAATGTGGTTTCTTGGACCGCGATGATTTCGGCTTATTCGCAGAGAGGGTTTGCCTCTCAAGCCTTGAATCTCTTTGTGGCAATGTTAAGATCAGGTACAGAACCAAACGAGTTCACTTTTGCTACCATACTTACTTCTTGCATAGGTAGTTTGGGATTTCAAATTGGTAGACAAATTCATTCCATCGTCATTAAAAGAAACTATGAGTCCCATATGTTTGTTGGAAGTTCACTTCTTGATATGTATGCAAAGTCTGGGAGAGTCCATGAAGCTCATGGAGTTTTCCAAAGCTTGCCCGAACGAGATGTCGTTGTGTGTACTGCTATCATCTCTGGCTATGCTCAAATGGGTCTTGATGTAGAAGCATTGAAGCTATTCCGTCAGCTCCAAAGTGAAGGAATGCATTCAAATTATGTAACTTATGCTAGTGTCTTAACTGCTCTATCCGGACTTGCTGCGCTAAATCATGGCAAGCAGGTCCACAACCATGTCCTTCGGTCTGGACAGTCTTTGAATGTGGTTCTCCTGAATTCTCTAATCGATATGTACTCAAAATGCGGTAACGTCTGCTACGCTAGGAGGATTTTCGATCACATGTCTGAGAGAACTTGTATATCATGGAATGCGATGCTCGTTGGATATAGTAAACATGGCATGGGGGGAGAGGTGCTCGAACTTTTTAAATTGATGAGAGAAGAAAATAAAGTTAAACCTGACAGCATCACGTATTTGGCTGTTTTATCTGGTTGTAGTCATGGACAACTAGAACATAAGGGGCTTGAAATATTTTACAACATGGCTGATGGAAAGGATGGGATTGAACCAGATATTGAGCATTATGGTTGTGTTGTTGATTTACTTGGACGTGTTGGCAGAATAGAAGAGGCTTTTGATTTTATAAGAAAGATGCCTTATGTGCCAACGGCTGCTATTTGGGGATCGCTGTTAGGTTCGTGTCGAGTCCACTCGAACGTCGACATCGGCATAATTGTGGGTCAGAAGCTTCTAGAAATAGAGCCTGAGAATGCAGGTAACTATGTTATTCTCTCAAATTTGCATGCTTCTGCAGGCAAATGGGAAGATATGAGAAATATAAGGGACCTGATGCAAGAGAAAGCTGTGATAAAGGAGCCAGGTCGCAGTTGGGTAGAGCTTGATCAGATTGTTCATACGTTCCATGCAAGTGATCACACTCATCCAAGAAGGGAGGAGGTGGCGAGGAAGGTGAAAGAATTAGCCATTAAATTCAAGGAAGAGGGTTATGTTCCTAACTTGAGTTGTGTGTTGTATGATGTGGATGAAGAACAGAAAGAGAAGGTACTTCTAGGCCACAGTGAAAAGCTAGCTATGGCATTTTGGTTGATTGCTGCTCCTGAAGGAGCAACGATCCGAGTCATAAAAAACCTCCGAGTTTGCGTCGATTGCCATAGTTTTGCCAAATTTGTGTCGAAGCTTTACGCAAGAACGATAATCCTAAGGGACAAAAACCGGTTCCATAATATAGTTGGGGGAATATGTTCTTGTGGAGATTACTGGTAA

Coding sequence (CDS)

ATGCTGCTGCGGAGCTTCTGTTTGTACTTTCATGTCAAAGATCTATTACTCTCTCCCATCTACACATTCTCCCGCCGAATATCTATTTCTCCATCATCCAACTTGAAAACACTGTGTTCCAATGGCCAATTGAATGAAGCATTGCTGCAAATGGCAATTTTGGGCTCTGAAATGAAGTTCGAAGGTTACGATACGATCTTGAACCAATGCGTTAGCCAAAGGGCTATTAGAGAAGGCCAAAGAGTTCATGCCCATATGATCAAAACTTGTTATTTGCCTCCGGTTTACCTCAGGACGAGGCTGATTGTGTTGTACAACAAGTGCGATTGTTTGGGTGATGCACGGGAAGTGTTCGATGAAATGCCCCTCAGAAATGTGGTTTCTTGGACCGCGATGATTTCGGCTTATTCGCAGAGAGGGTTTGCCTCTCAAGCCTTGAATCTCTTTGTGGCAATGTTAAGATCAGGTACAGAACCAAACGAGTTCACTTTTGCTACCATACTTACTTCTTGCATAGGTAGTTTGGGATTTCAAATTGGTAGACAAATTCATTCCATCGTCATTAAAAGAAACTATGAGTCCCATATGTTTGTTGGAAGTTCACTTCTTGATATGTATGCAAAGTCTGGGAGAGTCCATGAAGCTCATGGAGTTTTCCAAAGCTTGCCCGAACGAGATGTCGTTGTGTGTACTGCTATCATCTCTGGCTATGCTCAAATGGGTCTTGATGTAGAAGCATTGAAGCTATTCCGTCAGCTCCAAAGTGAAGGAATGCATTCAAATTATGTAACTTATGCTAGTGTCTTAACTGCTCTATCCGGACTTGCTGCGCTAAATCATGGCAAGCAGGTCCACAACCATGTCCTTCGGTCTGGACAGTCTTTGAATGTGGTTCTCCTGAATTCTCTAATCGATATGTACTCAAAATGCGGTAACGTCTGCTACGCTAGGAGGATTTTCGATCACATGTCTGAGAGAACTTGTATATCATGGAATGCGATGCTCGTTGGATATAGTAAACATGGCATGGGGGGAGAGGTGCTCGAACTTTTTAAATTGATGAGAGAAGAAAATAAAGTTAAACCTGACAGCATCACGTATTTGGCTGTTTTATCTGGTTGTAGTCATGGACAACTAGAACATAAGGGGCTTGAAATATTTTACAACATGGCTGATGGAAAGGATGGGATTGAACCAGATATTGAGCATTATGGTTGTGTTGTTGATTTACTTGGACGTGTTGGCAGAATAGAAGAGGCTTTTGATTTTATAAGAAAGATGCCTTATGTGCCAACGGCTGCTATTTGGGGATCGCTGTTAGGTTCGTGTCGAGTCCACTCGAACGTCGACATCGGCATAATTGTGGGTCAGAAGCTTCTAGAAATAGAGCCTGAGAATGCAGGTAACTATGTTATTCTCTCAAATTTGCATGCTTCTGCAGGCAAATGGGAAGATATGAGAAATATAAGGGACCTGATGCAAGAGAAAGCTGTGATAAAGGAGCCAGGTCGCAGTTGGGTAGAGCTTGATCAGATTGTTCATACGTTCCATGCAAGTGATCACACTCATCCAAGAAGGGAGGAGGTGGCGAGGAAGGTGAAAGAATTAGCCATTAAATTCAAGGAAGAGGGTTATGTTCCTAACTTGAGTTGTGTGTTGTATGATGTGGATGAAGAACAGAAAGAGAAGGTACTTCTAGGCCACAGTGAAAAGCTAGCTATGGCATTTTGGTTGATTGCTGCTCCTGAAGGAGCAACGATCCGAGTCATAAAAAACCTCCGAGTTTGCGTCGATTGCCATAGTTTTGCCAAATTTGTGTCGAAGCTTTACGCAAGAACGATAATCCTAAGGGACAAAAACCGGTTCCATAATATAGTTGGGGGAATATGTTCTTGTGGAGATTACTGGTAA

Protein sequence

MLLRSFCLYFHVKDLLLSPIYTFSRRISISPSSNLKTLCSNGQLNEALLQMAILGSEMKFEGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGSLGFQIGRQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASAGKWEDMRNIRDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKFKEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHSFAKFVSKLYARTIILRDKNRFHNIVGGICSCGDYW

Homology

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BLAST of CmoCh06G000730 vs. ExPASy Swiss-Prot
Match: Q9LIC3 (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 877.9 bits (2267), Expect = 7.1e-254
Identity = 411/602 (68.27%), Postives = 498/602 (82.72%), Query Frame = 0


Query: 35  LKTLCSNGQLNEALLQMAILGSEMKFEGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPP 94
           +  LCSNG+L EALL+MA+LG EM F GYD +LN C+ +RA+R+GQRVHAHMIKT YLP 
Sbjct: 27  ISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPA 86

Query: 95  VYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISAYSQRGFASQALNLFVAMLR 154
            YLRTRL++ Y KCDCL DAR+V DEMP +NVVSWTAMIS YSQ G +S+AL +F  M+R
Sbjct: 87  TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146

Query: 155 SGTEPNEFTFATILTSCIGSLGFQIGRQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHE 214
           S  +PNEFTFAT+LTSCI + G  +G+QIH +++K NY+SH+FVGSSLLDMYAK+G++ E
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKE 206

Query: 215 AHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQLQSEGMHSNYVTYASVLTALSG 274
           A  +F+ LPERDVV CTAII+GYAQ+GLD EAL++F +L SEGM  NYVTYAS+LTALSG
Sbjct: 207 AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG 266

Query: 275 LAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYARRIFDHMSERTCISWNAM 334
           LA L+HGKQ H HVLR       VL NSLIDMYSKCGN+ YARR+FD+M ERT ISWNAM
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAM 326

Query: 335 LVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGK 394
           LVGYSKHG+G EVLELF+LMR+E +VKPD++T LAVLSGCSHG++E  GL IF  M  G+
Sbjct: 327 LVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGE 386

Query: 395 DGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGII 454
            G +P  EHYGC+VD+LGR GRI+EAF+FI++MP  PTA + GSLLG+CRVH +VDIG  
Sbjct: 387 YGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGES 446

Query: 455 VGQKLLEIEPENAGNYVILSNLHASAGKWEDMRNIRDLMQEKAVIKEPGRSWVELDQIVH 514
           VG++L+EIEPENAGNYVILSNL+ASAG+W D+ N+R +M +KAV KEPGRSW++ +Q +H
Sbjct: 447 VGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLH 506

Query: 515 TFHASDHTHPRREEVARKVKELAIKFKEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAM 574
            FHA+D THPRREEV  K+KE++IK K+ GYVP+LSCVLYDVDEEQKEK+LLGHSEKLA+
Sbjct: 507 YFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLAL 566

Query: 575 AFWLIAAPEGATIRVIKNLRVCVDCHSFAKFVSKLYARTIILRDKNRFHNIVGGICSCGD 634
            F LIA  EG  IRV KNLR+CVDCH+FAK  SK++ R + LRDKNRFH IV GICSCGD
Sbjct: 567 TFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGD 626

Query: 635 YW 637
           YW
Sbjct: 627 YW 628

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BLAST of CmoCh06G000730 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 7.6e-139
Identity = 239/574 (41.64%), Postives = 367/574 (63.94%), Query Frame = 0


Query: 63  YDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEMP 122
           Y+T+L +C   + + +G+ VHAH++++ +   + +   L+ +Y KC  L +AR+VF++MP
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 123 LRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGSLGFQIGRQ 182
            R+ V+WT +IS YSQ      AL  F  MLR G  PNEFT ++++ +         G Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182

Query: 183 IHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMGL 242
           +H   +K  ++S++ VGS+LLD+Y + G + +A  VF +L  R+ V   A+I+G+A+   
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242

Query: 243 DVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNS 302
             +AL+LF+ +  +G   ++ +YAS+  A S    L  GK VH ++++SG+ L     N+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302

Query: 303 LIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKP 362
           L+DMY+K G++  AR+IFD +++R  +SWN++L  Y++HG G E +  F+ MR    ++P
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG-IRP 362

Query: 363 DSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFD 422
           + I++L+VL+ CSH  L  +G   +  M   KDGI P+  HY  VVDLLGR G +  A  
Sbjct: 363 NEISFLSVLTACSHSGLLDEGWHYYELMK--KDGIVPEAWHYVTVVDLLGRAGDLNRALR 422

Query: 423 FIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASAGK 482
           FI +MP  PTAAIW +LL +CR+H N ++G    + + E++P++ G +VIL N++AS G+
Sbjct: 423 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 482

Query: 483 WEDMRNIRDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKFKE 542
           W D   +R  M+E  V KEP  SWVE++  +H F A+D  HP+REE+ARK +E+  K KE
Sbjct: 483 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 542

Query: 543 EGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHSF 602
            GYVP+ S V+  VD++++E  L  HSEK+A+AF L+  P G+TI + KN+RVC DCH+ 
Sbjct: 543 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 602

Query: 603 AKFVSKLYARTIILRDKNRFHNIVGGICSCGDYW 637
            K  SK+  R II+RD NRFH+   G CSC DYW
Sbjct: 603 IKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633

[Close]

BLAST of CmoCh06G000730 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 1.8e-132
Identity = 234/627 (37.32%), Postives = 383/627 (61.08%), Query Frame = 0


Query: 16  LLSPIYTFSRRISISPSSNLKTLCSNGQLNEALLQMAILGSEMKFEGYDTILNQCVSQRA 75
           L +P  +      IS +  +++LC  G+L +A+  ++   S  + + Y+ ++  C  + +
Sbjct: 34  LNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQ-QTYELLILCCGHRSS 93

Query: 76  IREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISA 135
           + +  RVH H++        +L T+LI +Y+    +  AR+VFD+   R +  W A+  A
Sbjct: 94  LSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRA 153

Query: 136 YSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGS----LGFQIGRQIHSIVIKRN 195
            +  G   + L L+  M R G E + FT+  +L +C+ S         G++IH+ + +R 
Sbjct: 154 LTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG 213

Query: 196 YESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFR 255
           Y SH+++ ++L+DMYA+ G V  A  VF  +P R+VV  +A+I+ YA+ G   EAL+ FR
Sbjct: 214 YSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFR 273

Query: 256 QLQSEGMHS--NYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSK 315
           ++  E   S  N VT  SVL A + LAAL  GK +H ++LR G    + ++++L+ MY +
Sbjct: 274 EMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGR 333

Query: 316 CGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSITYLA 375
           CG +   +R+FD M +R  +SWN+++  Y  HG G + +++F+ M   N   P  +T+++
Sbjct: 334 CGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML-ANGASPTPVTFVS 393

Query: 376 VLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPY 435
           VL  CSH  L  +G  +F  M     GI+P IEHY C+VDLLGR  R++EA   ++ M  
Sbjct: 394 VLGACSHEGLVEEGKRLFETMW-RDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRT 453

Query: 436 VPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASAGKWEDMRNI 495
            P   +WGSLLGSCR+H NV++     ++L  +EP+NAGNYV+L++++A A  W++++ +
Sbjct: 454 EPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRV 513

Query: 496 RDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKFKEEGYVPNL 555
           + L++ + + K PGR W+E+ + +++F + D  +P  E++   + +LA   KE+GY+P  
Sbjct: 514 KKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQT 573

Query: 556 SCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHSFAKFVSKL 615
             VLY+++ E+KE+++LGHSEKLA+AF LI   +G  IR+ KNLR+C DCH F KF+SK 
Sbjct: 574 KGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKF 633

Query: 616 YARTIILRDKNRFHNIVGGICSCGDYW 637
             + I++RD NRFH    G+CSCGDYW
Sbjct: 634 MEKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]

BLAST of CmoCh06G000730 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 6.9e-132
Identity = 247/617 (40.03%), Postives = 372/617 (60.29%), Query Frame = 0


Query: 32  SSNLKTLCSNGQLNEALL---QMAILGSEMKFEGYDTILNQCVSQRAIREGQRVHAHMIK 91
           +S +  L  +G   EALL    M  L        +   +  C S   I  G++ H     
Sbjct: 45  NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104

Query: 92  TCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISAYSQRGFASQALNL 151
             Y   +++ + LIV+Y+ C  L DAR+VFDE+P RN+VSWT+MI  Y   G A  A++L
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSL 164

Query: 152 FVAMLRSGTEPNEFTF------ATILTSCIGSLGFQIGRQIHSIVIKRNYESHMFVGSSL 211
           F  +L    + ++  F       +++++C       +   IHS VIKR ++  + VG++L
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTL 224

Query: 212 LDMYAKSGR--VHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQL-QSEGMH 271
           LD YAK G   V  A  +F  + ++D V   +I+S YAQ G+  EA ++FR+L +++ + 
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284

Query: 272 SNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYARRI 331
            N +T ++VL A+S   AL  GK +H+ V+R G   +V++  S+IDMY KCG V  AR+ 
Sbjct: 285 FNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKA 344

Query: 332 FDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSHGQL 391
           FD M  +   SW AM+ GY  HG   + LELF  M +   V+P+ IT+++VL+ CSH  L
Sbjct: 345 FDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYITFVSVLAACSHAGL 404

Query: 392 EHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIWGSL 451
             +G   ++N   G+ G+EP +EHYGC+VDLLGR G +++A+D I++M   P + IW SL
Sbjct: 405 HVEGWR-WFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSL 464

Query: 452 LGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASAGKWEDMRNIRDLMQEKAVI 511
           L +CR+H NV++  I   +L E++  N G Y++LS+++A AG+W+D+  +R +M+ + ++
Sbjct: 465 LAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLV 524

Query: 512 KEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKFKEEGYVPNLSCVLYDVDEE 571
           K PG S +EL+  VH F   D  HP+RE++   + EL  K  E GYV N S V +DVDEE
Sbjct: 525 KPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEE 584

Query: 572 QKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHSFAKFVSKLYARTIILRDK 631
           +KE  L  HSEKLA+AF ++    G+T+ V+KNLRVC DCH+  K +SK+  R  ++RD 
Sbjct: 585 EKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDA 644

Query: 632 NRFHNIVGGICSCGDYW 637
            RFH+   G CSCGDYW
Sbjct: 645 KRFHHFKDGGCSCGDYW 659

[Close]

BLAST of CmoCh06G000730 vs. ExPASy Swiss-Prot
Match: Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 1.5e-131
Identity = 243/607 (40.03%), Postives = 364/607 (59.97%), Query Frame = 0


Query: 33  SNLKTLCSNGQLNEALLQMAILGSEMKFEG---YDTILNQCVSQRAIREGQRVHAHMIKT 92
           S    LC    L  A+  M  L S   +     Y  ++  C+S RA+ EG  +  H+   
Sbjct: 31  SEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFN 90

Query: 93  CYLPPVYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISAYSQRGFASQALNLF 152
            + P ++L   LI +Y K + L DA ++FD+MP RNV+SWT MISAYS+     +AL L 
Sbjct: 91  GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL 150

Query: 153 VAMLRSGTEPNEFTFATILTSCIGSLGFQIGRQIHSIVIKRNYESHMFVGSSLLDMYAKS 212
           V MLR    PN +T++++L SC G       R +H  +IK   ES +FV S+L+D++AK 
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKL 210

Query: 213 GRVHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQLQSEGMHSNYVTYASVL 272
           G   +A  VF  +   D +V  +II G+AQ      AL+LF++++  G  +   T  SVL
Sbjct: 211 GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL 270

Query: 273 TALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYARRIFDHMSERTCI 332
            A +GLA L  G Q H H+++  Q L  +L N+L+DMY KCG++  A R+F+ M ER  I
Sbjct: 271 RACTGLALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVI 330

Query: 333 SWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEHKGLEIFYN 392
           +W+ M+ G +++G   E L+LF+ M+     KP+ IT + VL  CSH  L   G   F +
Sbjct: 331 TWSTMISGLAQNGYSQEALKLFERMKSSG-TKPNYITIVGVLFACSHAGLLEDGWYYFRS 390

Query: 393 MADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIWGSLLGSCRVHSNV 452
           M     GI+P  EHYGC++DLLG+ G++++A   + +M   P A  W +LLG+CRV  N+
Sbjct: 391 MKK-LYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 450

Query: 453 DIGIIVGQKLLEIEPENAGNYVILSNLHASAGKWEDMRNIRDLMQEKAVIKEPGRSWVEL 512
            +     +K++ ++PE+AG Y +LSN++A++ KW+ +  IR  M+++ + KEPG SW+E+
Sbjct: 451 VLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 510

Query: 513 DQIVHTFHASDHTHPRREEVARKVKELAIKFKEEGYVPNLSCVLYDVDEEQKEKVLLGHS 572
           ++ +H F   D++HP+  EV++K+ +L  +    GYVP  + VL D++ EQ E  L  HS
Sbjct: 511 NKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHS 570

Query: 573 EKLAMAFWLIAAPEGATIRVIKNLRVCVDCHSFAKFVSKLYARTIILRDKNRFHNIVGGI 632
           EKLA+AF L+  P    IR+ KNLR+C DCH F K  SKL  R+I++RD  R+H+   G 
Sbjct: 571 EKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGK 630

Query: 633 CSCGDYW 637
           CSCGDYW
Sbjct: 631 CSCGDYW 630

[Close]

BLAST of CmoCh06G000730 vs. ExPASy TrEMBL
Match: A0A6J1ETZ1 (putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111437677 PE=3 SV=1)

HSP 1 Score: 1293.1 bits (3345), Expect = 0.0e+00
Identity = 636/636 (100.00%), Postives = 636/636 (100.00%), Query Frame = 0


Query: 1   MLLRSFCLYFHVKDLLLSPIYTFSRRISISPSSNLKTLCSNGQLNEALLQMAILGSEMKF 60
           MLLRSFCLYFHVKDLLLSPIYTFSRRISISPSSNLKTLCSNGQLNEALLQMAILGSEMKF
Sbjct: 1   MLLRSFCLYFHVKDLLLSPIYTFSRRISISPSSNLKTLCSNGQLNEALLQMAILGSEMKF 60

Query: 61  EGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDE 120
           EGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDE
Sbjct: 61  EGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDE 120

Query: 121 MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGSLGFQIG 180
           MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGSLGFQIG
Sbjct: 121 MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGSLGFQIG 180

Query: 181 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQM 240
           RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQM
Sbjct: 181 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQM 240

Query: 241 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL 300
           GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL
Sbjct: 241 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL 300

Query: 301 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKV 360
           NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKV
Sbjct: 301 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKV 360

Query: 361 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA 420
           KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA
Sbjct: 361 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA 420

Query: 421 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASA 480
           FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASA
Sbjct: 421 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASA 480

Query: 481 GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKF 540
           GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKF
Sbjct: 481 GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKF 540

Query: 541 KEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH 600
           KEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH
Sbjct: 541 KEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH 600

Query: 601 SFAKFVSKLYARTIILRDKNRFHNIVGGICSCGDYW 637
           SFAKFVSKLYARTIILRDKNRFHNIVGGICSCGDYW
Sbjct: 601 SFAKFVSKLYARTIILRDKNRFHNIVGGICSCGDYW 636

[Close]

BLAST of CmoCh06G000730 vs. ExPASy TrEMBL
Match: A0A6J1I7X7 (putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111470004 PE=3 SV=1)

HSP 1 Score: 1267.3 bits (3278), Expect = 0.0e+00
Identity = 621/636 (97.64%), Postives = 630/636 (99.06%), Query Frame = 0


Query: 1   MLLRSFCLYFHVKDLLLSPIYTFSRRISISPSSNLKTLCSNGQLNEALLQMAILGSEMKF 60
           ML RSFCLYFHVKDLLLSPIYTFSR+IS+SPS NLKTLCSNGQLNEALLQMAILGSEMKF
Sbjct: 1   MLRRSFCLYFHVKDLLLSPIYTFSRQISLSPSPNLKTLCSNGQLNEALLQMAILGSEMKF 60

Query: 61  EGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDE 120
           EGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKC+CLGDAREVFDE
Sbjct: 61  EGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCECLGDAREVFDE 120

Query: 121 MPLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGSLGFQIG 180
           MPLRNVVSWTAMISAYSQRGFASQALNLFV MLRSGTEPNEFTFATILTSCIGSLGF+IG
Sbjct: 121 MPLRNVVSWTAMISAYSQRGFASQALNLFVEMLRSGTEPNEFTFATILTSCIGSLGFKIG 180

Query: 181 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQM 240
           RQIHSIVIKRNYESHMFVGSSLLDMYAKSGR+HEAHGVFQSLPERDVVVCTAIISGYAQM
Sbjct: 181 RQIHSIVIKRNYESHMFVGSSLLDMYAKSGRIHEAHGVFQSLPERDVVVCTAIISGYAQM 240

Query: 241 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLL 300
           GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSL VVLL
Sbjct: 241 GLDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLYVVLL 300

Query: 301 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKV 360
           NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMG EVLELFKLMREENKV
Sbjct: 301 NSLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGREVLELFKLMREENKV 360

Query: 361 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEA 420
           KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEP+IEHYGCVVDLLGRVGRIEEA
Sbjct: 361 KPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPEIEHYGCVVDLLGRVGRIEEA 420

Query: 421 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASA 480
           FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNL+ASA
Sbjct: 421 FDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLYASA 480

Query: 481 GKWEDMRNIRDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKF 540
           GKWEDMRNIRD+MQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKF
Sbjct: 481 GKWEDMRNIRDVMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKF 540

Query: 541 KEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCH 600
           KEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLI APEGATIRVIKNLRVCVDCH
Sbjct: 541 KEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIDAPEGATIRVIKNLRVCVDCH 600

Query: 601 SFAKFVSKLYARTIILRDKNRFHNIVGGICSCGDYW 637
           SFAKFVSKLYART+ILRDKNRFHNIVGGICSCGDYW
Sbjct: 601 SFAKFVSKLYARTVILRDKNRFHNIVGGICSCGDYW 636

[Close]

BLAST of CmoCh06G000730 vs. ExPASy TrEMBL
Match: A0A5A7TNQ9 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005710 PE=3 SV=1)

HSP 1 Score: 1150.6 bits (2975), Expect = 0.0e+00
Identity = 560/635 (88.19%), Postives = 592/635 (93.23%), Query Frame = 0


Query: 4   RSFCLYFHVKDLLLSPI--YTFSRRISISPSSNLKTLCSNGQLNEALLQMAILGSEMKFE 63
           +SFC+Y HV+ L LSP+  YTFSR+IS+SPS NLKTLCS+GQL EALLQMAILG E+KFE
Sbjct: 4   KSFCVYSHVRHLFLSPVSQYTFSRQISLSPSPNLKTLCSSGQLTEALLQMAILGPEVKFE 63

Query: 64  GYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEM 123
           GYDTILN+CVSQRAIREGQRVH HMIKTCYLP VYLRTRLIVLYNKCDCLGDARE+FDEM
Sbjct: 64  GYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEM 123

Query: 124 PLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGSLGFQIGR 183
           P RNVVSWTAMISAYSQRGFA +ALNLFV MLRS TEPN FTFATILTSC GSLGF+ GR
Sbjct: 124 PQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGR 183

Query: 184 QIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMG 243
           QIHSI IKRNYESHMFVGSSLLDMYAKSGR+ +AHGVF  LPERDVV CTAIISGYAQMG
Sbjct: 184 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRIRDAHGVFHCLPERDVVACTAIISGYAQMG 243

Query: 244 LDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLN 303
           LD EALKLFRQLQ EGM+SN VTYASVLTALSGLAALNHGKQVH+HVLRSGQ   VVLLN
Sbjct: 244 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQCSYVVLLN 303

Query: 304 SLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVK 363
           SLIDMYSKCGNVCYARRIFD M ERTCISWNAMLVGYSKHGM  EVLELFKLMREENKVK
Sbjct: 304 SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 363

Query: 364 PDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAF 423
           PDSITYLAVLSGCSHGQLE  GLEIFYNM +GKDGIEPD+ HYGCVVDLLGR GR+EEAF
Sbjct: 364 PDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDMGHYGCVVDLLGRAGRVEEAF 423

Query: 424 DFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASAG 483
           DFI+KMP+VP A IWGSLLGSCRVHSNV+IGIIVGQKLLE+EPENAGNYVILSNL+ASAG
Sbjct: 424 DFIKKMPFVPAAPIWGSLLGSCRVHSNVEIGIIVGQKLLELEPENAGNYVILSNLYASAG 483

Query: 484 KWEDMRNIRDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKFK 543
           KWEDMRNIRDLMQEKAV KEPGRSWVELDQIVHTFHASDHTHPRREEVA+KVKEL+IKFK
Sbjct: 484 KWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFK 543

Query: 544 EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHS 603
           E+GYVP+LSCVLYDVDEEQKEKVLLGHSEKLA+AF LIA PEG TIRVIKNLR+CVDCHS
Sbjct: 544 EDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHS 603

Query: 604 FAKFVSKLYARTIILRDKNRFHNIVGGICSCGDYW 637
           FAKFVSKLYART+ILRDKNRFHNIVGG+CSCGDYW
Sbjct: 604 FAKFVSKLYARTVILRDKNRFHNIVGGVCSCGDYW 638

[Close]

BLAST of CmoCh06G000730 vs. ExPASy TrEMBL
Match: A0A1S3B6T6 (putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486794 PE=3 SV=1)

HSP 1 Score: 1150.6 bits (2975), Expect = 0.0e+00
Identity = 560/635 (88.19%), Postives = 592/635 (93.23%), Query Frame = 0


Query: 4   RSFCLYFHVKDLLLSPI--YTFSRRISISPSSNLKTLCSNGQLNEALLQMAILGSEMKFE 63
           +SFC+Y HV+ L LSP+  YTFSR+IS+SPS NLKTLCS+GQL EALLQMAILG E+KFE
Sbjct: 4   KSFCVYSHVRHLFLSPVSQYTFSRQISLSPSPNLKTLCSSGQLTEALLQMAILGPEVKFE 63

Query: 64  GYDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEM 123
           GYDTILN+CVSQRAIREGQRVH HMIKTCYLP VYLRTRLIVLYNKCDCLGDARE+FDEM
Sbjct: 64  GYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEM 123

Query: 124 PLRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGSLGFQIGR 183
           P RNVVSWTAMISAYSQRGFA +ALNLFV MLRS TEPN FTFATILTSC GSLGF+ GR
Sbjct: 124 PQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGR 183

Query: 184 QIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMG 243
           QIHSI IKRNYESHMFVGSSLLDMYAKSGR+ +AHGVF  LPERDVV CTAIISGYAQMG
Sbjct: 184 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRIRDAHGVFHCLPERDVVACTAIISGYAQMG 243

Query: 244 LDVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLN 303
           LD EALKLFRQLQ EGM+SN VTYASVLTALSGLAALNHGKQVH+HVLRSGQ   VVLLN
Sbjct: 244 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQCSYVVLLN 303

Query: 304 SLIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVK 363
           SLIDMYSKCGNVCYARRIFD M ERTCISWNAMLVGYSKHGM  EVLELFKLMREENKVK
Sbjct: 304 SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 363

Query: 364 PDSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAF 423
           PDSITYLAVLSGCSHGQLE  GLEIFYNM +GKDGIEPD+ HYGCVVDLLGR GR+EEAF
Sbjct: 364 PDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDMGHYGCVVDLLGRAGRVEEAF 423

Query: 424 DFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASAG 483
           DFI+KMP+VP A IWGSLLGSCRVHSNV+IGIIVGQKLLE+EPENAGNYVILSNL+ASAG
Sbjct: 424 DFIKKMPFVPAAPIWGSLLGSCRVHSNVEIGIIVGQKLLELEPENAGNYVILSNLYASAG 483

Query: 484 KWEDMRNIRDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKFK 543
           KWEDMRNIRDLMQEKAV KEPGRSWVELDQIVHTFHASDHTHPRREEVA+KVKEL+IKFK
Sbjct: 484 KWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFK 543

Query: 544 EEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHS 603
           E+GYVP+LSCVLYDVDEEQKEKVLLGHSEKLA+AF LIA PEG TIRVIKNLR+CVDCHS
Sbjct: 544 EDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHS 603

Query: 604 FAKFVSKLYARTIILRDKNRFHNIVGGICSCGDYW 637
           FAKFVSKLYART+ILRDKNRFHNIVGG+CSCGDYW
Sbjct: 604 FAKFVSKLYARTVILRDKNRFHNIVGGVCSCGDYW 638

[Close]

BLAST of CmoCh06G000730 vs. ExPASy TrEMBL
Match: A0A6J1DLD3 (putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111021523 PE=3 SV=1)

HSP 1 Score: 1141.7 bits (2952), Expect = 0.0e+00
Identity = 551/631 (87.32%), Postives = 595/631 (94.29%), Query Frame = 0


Query: 8   LYFHVKDLLLSPI--YTFSRRISISPSSNLKTLCSNGQLNEALLQMAILGSEMKFEGYDT 67
           LY + K +  S +  Y+F+R++S+S S NLKTLCSNG+  EALLQMAILG+EMKFEGYDT
Sbjct: 8   LYSNGKQIFFSSVSHYSFTRQLSLSSSPNLKTLCSNGEFKEALLQMAILGAEMKFEGYDT 67

Query: 68  ILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEMPLRN 127
           ILN+CVSQRA REGQRVHAHMIKTCYLPPVYLRTRL+VLYNKC CLG+AR+VFDEMP RN
Sbjct: 68  ILNECVSQRATREGQRVHAHMIKTCYLPPVYLRTRLLVLYNKCGCLGEARKVFDEMPQRN 127

Query: 128 VVSWTAMISAYSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGSLGFQIGRQIHS 187
           VVSWTAMISAYSQRGFAS+ALNLFV M+RSGTEPNEFTFATILTSCIGSLG++IGRQ+HS
Sbjct: 128 VVSWTAMISAYSQRGFASEALNLFVGMIRSGTEPNEFTFATILTSCIGSLGYEIGRQVHS 187

Query: 188 IVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVE 247
           I IKRNYESHMFVGSSLLDMYAKSGR+HEAHGVF+ LPERDVVVCTAIISGYAQMGLD E
Sbjct: 188 IAIKRNYESHMFVGSSLLDMYAKSGRIHEAHGVFRYLPERDVVVCTAIISGYAQMGLDEE 247

Query: 248 ALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLID 307
           AL LFRQLQSEGM SNYVTYAS+LTALSGLAALNHGKQVHNHVLR GQS  VVLLNSLID
Sbjct: 248 ALGLFRQLQSEGMKSNYVTYASILTALSGLAALNHGKQVHNHVLRLGQSSYVVLLNSLID 307

Query: 308 MYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSI 367
           MYSKCGNVCYARRIFD M ERTCISWNAMLVGYSKHGMG +VLELFKLMREENKVKPDSI
Sbjct: 308 MYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMGNDVLELFKLMREENKVKPDSI 367

Query: 368 TYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIR 427
           T+LAVLSGCSHG+LE +GLEIFYNMADG DG+EPDI HYGCVVDLLGR GR++EAFDFI+
Sbjct: 368 TFLAVLSGCSHGKLEDRGLEIFYNMADGVDGVEPDIGHYGCVVDLLGRAGRVKEAFDFIK 427

Query: 428 KMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASAGKWED 487
           KMP+VPTAAIWGSLLGSCRVH NVDIGIIVGQ+LLEIEPENAGNYVILSNL+ASAG+WED
Sbjct: 428 KMPFVPTAAIWGSLLGSCRVHLNVDIGIIVGQQLLEIEPENAGNYVILSNLYASAGRWED 487

Query: 488 MRNIRDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKFKEEGY 547
           MRNIRD MQEKAVIKEPGRSWVELDQ+VHTFHASDHTHPRREEVA+KVKEL+IKFKE+GY
Sbjct: 488 MRNIRDSMQEKAVIKEPGRSWVELDQVVHTFHASDHTHPRREEVAKKVKELSIKFKEDGY 547

Query: 548 VPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHSFAKF 607
           VP+LSCVLYDVD+EQKEKVLLGHSEKLA+AF LIA P+ ATIRVIKNLRVCVDCHSFAKF
Sbjct: 548 VPDLSCVLYDVDDEQKEKVLLGHSEKLALAFGLIATPDRATIRVIKNLRVCVDCHSFAKF 607

Query: 608 VSKLYARTIILRDKNRFHNIVGGICSCGDYW 637
           VSKLYART+ILRDKNRFHNIVGG+CSCGDYW
Sbjct: 608 VSKLYARTVILRDKNRFHNIVGGVCSCGDYW 638

[Close]

BLAST of CmoCh06G000730 vs. TAIR 10
Match: AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 877.9 bits (2267), Expect = 5.1e-255
Identity = 411/602 (68.27%), Postives = 498/602 (82.72%), Query Frame = 0


Query: 35  LKTLCSNGQLNEALLQMAILGSEMKFEGYDTILNQCVSQRAIREGQRVHAHMIKTCYLPP 94
           +  LCSNG+L EALL+MA+LG EM F GYD +LN C+ +RA+R+GQRVHAHMIKT YLP 
Sbjct: 27  ISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPA 86

Query: 95  VYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISAYSQRGFASQALNLFVAMLR 154
            YLRTRL++ Y KCDCL DAR+V DEMP +NVVSWTAMIS YSQ G +S+AL +F  M+R
Sbjct: 87  TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146

Query: 155 SGTEPNEFTFATILTSCIGSLGFQIGRQIHSIVIKRNYESHMFVGSSLLDMYAKSGRVHE 214
           S  +PNEFTFAT+LTSCI + G  +G+QIH +++K NY+SH+FVGSSLLDMYAK+G++ E
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKE 206

Query: 215 AHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQLQSEGMHSNYVTYASVLTALSG 274
           A  +F+ LPERDVV CTAII+GYAQ+GLD EAL++F +L SEGM  NYVTYAS+LTALSG
Sbjct: 207 AREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG 266

Query: 275 LAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYARRIFDHMSERTCISWNAM 334
           LA L+HGKQ H HVLR       VL NSLIDMYSKCGN+ YARR+FD+M ERT ISWNAM
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAM 326

Query: 335 LVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEHKGLEIFYNMADGK 394
           LVGYSKHG+G EVLELF+LMR+E +VKPD++T LAVLSGCSHG++E  GL IF  M  G+
Sbjct: 327 LVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGE 386

Query: 395 DGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIWGSLLGSCRVHSNVDIGII 454
            G +P  EHYGC+VD+LGR GRI+EAF+FI++MP  PTA + GSLLG+CRVH +VDIG  
Sbjct: 387 YGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGES 446

Query: 455 VGQKLLEIEPENAGNYVILSNLHASAGKWEDMRNIRDLMQEKAVIKEPGRSWVELDQIVH 514
           VG++L+EIEPENAGNYVILSNL+ASAG+W D+ N+R +M +KAV KEPGRSW++ +Q +H
Sbjct: 447 VGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLH 506

Query: 515 TFHASDHTHPRREEVARKVKELAIKFKEEGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAM 574
            FHA+D THPRREEV  K+KE++IK K+ GYVP+LSCVLYDVDEEQKEK+LLGHSEKLA+
Sbjct: 507 YFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLAL 566

Query: 575 AFWLIAAPEGATIRVIKNLRVCVDCHSFAKFVSKLYARTIILRDKNRFHNIVGGICSCGD 634
            F LIA  EG  IRV KNLR+CVDCH+FAK  SK++ R + LRDKNRFH IV GICSCGD
Sbjct: 567 TFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGD 626

Query: 635 YW 637
           YW
Sbjct: 627 YW 628

[Close]

BLAST of CmoCh06G000730 vs. TAIR 10
Match: AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 478.4 bits (1230), Expect = 8.9e-135
Identity = 232/562 (41.28%), Postives = 360/562 (64.06%), Query Frame = 0


Query: 63  YDTILNQCVSQRAIREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEMP 122
           Y+T+L +C   + + +G+ VHAH++++ +   + +   L+ +Y KC  L +AR+VF++MP
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 123 LRNVVSWTAMISAYSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGSLGFQIGRQ 182
            R+ V+WT +IS YSQ      AL  F  MLR G  PNEFT ++++ +         G Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182

Query: 183 IHSIVIKRNYESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMGL 242
           +H   +K  ++S++ VGS+LLD+Y + G + +A  VF +L  R+ V   A+I+G+A+   
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242

Query: 243 DVEALKLFRQLQSEGMHSNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNS 302
             +AL+LF+ +  +G   ++ +YAS+  A S    L  GK VH ++++SG+ L     N+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302

Query: 303 LIDMYSKCGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKP 362
           L+DMY+K G++  AR+IFD +++R  +SWN++L  Y++HG G E +  F+ MR    ++P
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG-IRP 362

Query: 363 DSITYLAVLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFD 422
           + I++L+VL+ CSH  L  +G   +  M   KDGI P+  HY  VVDLLGR G +  A  
Sbjct: 363 NEISFLSVLTACSHSGLLDEGWHYYELMK--KDGIVPEAWHYVTVVDLLGRAGDLNRALR 422

Query: 423 FIRKMPYVPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASAGK 482
           FI +MP  PTAAIW +LL +CR+H N ++G    + + E++P++ G +VIL N++AS G+
Sbjct: 423 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 482

Query: 483 WEDMRNIRDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKFKE 542
           W D   +R  M+E  V KEP  SWVE++  +H F A+D  HP+REE+ARK +E+  K KE
Sbjct: 483 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 542

Query: 543 EGYVPNLSCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHSF 602
            GYVP+ S V+  VD++++E  L  HSEK+A+AF L+  P G+TI + KN+RVC DCH+ 
Sbjct: 543 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 602

Query: 603 AKFVSKLYARTIILRDKNRFHN 625
            K  SK+  R II+RD NRFH+
Sbjct: 603 IKLASKVVGREIIVRDTNRFHH 621

[Close]

BLAST of CmoCh06G000730 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 474.6 bits (1220), Expect = 1.3e-133
Identity = 234/627 (37.32%), Postives = 383/627 (61.08%), Query Frame = 0


Query: 16  LLSPIYTFSRRISISPSSNLKTLCSNGQLNEALLQMAILGSEMKFEGYDTILNQCVSQRA 75
           L +P  +      IS +  +++LC  G+L +A+  ++   S  + + Y+ ++  C  + +
Sbjct: 34  LNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQ-QTYELLILCCGHRSS 93

Query: 76  IREGQRVHAHMIKTCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISA 135
           + +  RVH H++        +L T+LI +Y+    +  AR+VFD+   R +  W A+  A
Sbjct: 94  LSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRA 153

Query: 136 YSQRGFASQALNLFVAMLRSGTEPNEFTFATILTSCIGS----LGFQIGRQIHSIVIKRN 195
            +  G   + L L+  M R G E + FT+  +L +C+ S         G++IH+ + +R 
Sbjct: 154 LTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG 213

Query: 196 YESHMFVGSSLLDMYAKSGRVHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFR 255
           Y SH+++ ++L+DMYA+ G V  A  VF  +P R+VV  +A+I+ YA+ G   EAL+ FR
Sbjct: 214 YSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFR 273

Query: 256 QLQSEGMHS--NYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSK 315
           ++  E   S  N VT  SVL A + LAAL  GK +H ++LR G    + ++++L+ MY +
Sbjct: 274 EMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGR 333

Query: 316 CGNVCYARRIFDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSITYLA 375
           CG +   +R+FD M +R  +SWN+++  Y  HG G + +++F+ M   N   P  +T+++
Sbjct: 334 CGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML-ANGASPTPVTFVS 393

Query: 376 VLSGCSHGQLEHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPY 435
           VL  CSH  L  +G  +F  M     GI+P IEHY C+VDLLGR  R++EA   ++ M  
Sbjct: 394 VLGACSHEGLVEEGKRLFETMW-RDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRT 453

Query: 436 VPTAAIWGSLLGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASAGKWEDMRNI 495
            P   +WGSLLGSCR+H NV++     ++L  +EP+NAGNYV+L++++A A  W++++ +
Sbjct: 454 EPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRV 513

Query: 496 RDLMQEKAVIKEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKFKEEGYVPNL 555
           + L++ + + K PGR W+E+ + +++F + D  +P  E++   + +LA   KE+GY+P  
Sbjct: 514 KKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQT 573

Query: 556 SCVLYDVDEEQKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHSFAKFVSKL 615
             VLY+++ E+KE+++LGHSEKLA+AF LI   +G  IR+ KNLR+C DCH F KF+SK 
Sbjct: 574 KGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKF 633

Query: 616 YARTIILRDKNRFHNIVGGICSCGDYW 637
             + I++RD NRFH    G+CSCGDYW
Sbjct: 634 MEKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]

BLAST of CmoCh06G000730 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 472.6 bits (1215), Expect = 4.9e-133
Identity = 247/617 (40.03%), Postives = 372/617 (60.29%), Query Frame = 0


Query: 32  SSNLKTLCSNGQLNEALL---QMAILGSEMKFEGYDTILNQCVSQRAIREGQRVHAHMIK 91
           +S +  L  +G   EALL    M  L        +   +  C S   I  G++ H     
Sbjct: 45  NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104

Query: 92  TCYLPPVYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISAYSQRGFASQALNL 151
             Y   +++ + LIV+Y+ C  L DAR+VFDE+P RN+VSWT+MI  Y   G A  A++L
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSL 164

Query: 152 FVAMLRSGTEPNEFTF------ATILTSCIGSLGFQIGRQIHSIVIKRNYESHMFVGSSL 211
           F  +L    + ++  F       +++++C       +   IHS VIKR ++  + VG++L
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTL 224

Query: 212 LDMYAKSGR--VHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQL-QSEGMH 271
           LD YAK G   V  A  +F  + ++D V   +I+S YAQ G+  EA ++FR+L +++ + 
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284

Query: 272 SNYVTYASVLTALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYARRI 331
            N +T ++VL A+S   AL  GK +H+ V+R G   +V++  S+IDMY KCG V  AR+ 
Sbjct: 285 FNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKA 344

Query: 332 FDHMSERTCISWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSHGQL 391
           FD M  +   SW AM+ GY  HG   + LELF  M +   V+P+ IT+++VL+ CSH  L
Sbjct: 345 FDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYITFVSVLAACSHAGL 404

Query: 392 EHKGLEIFYNMADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIWGSL 451
             +G   ++N   G+ G+EP +EHYGC+VDLLGR G +++A+D I++M   P + IW SL
Sbjct: 405 HVEGWR-WFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSL 464

Query: 452 LGSCRVHSNVDIGIIVGQKLLEIEPENAGNYVILSNLHASAGKWEDMRNIRDLMQEKAVI 511
           L +CR+H NV++  I   +L E++  N G Y++LS+++A AG+W+D+  +R +M+ + ++
Sbjct: 465 LAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLV 524

Query: 512 KEPGRSWVELDQIVHTFHASDHTHPRREEVARKVKELAIKFKEEGYVPNLSCVLYDVDEE 571
           K PG S +EL+  VH F   D  HP+RE++   + EL  K  E GYV N S V +DVDEE
Sbjct: 525 KPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEE 584

Query: 572 QKEKVLLGHSEKLAMAFWLIAAPEGATIRVIKNLRVCVDCHSFAKFVSKLYARTIILRDK 631
           +KE  L  HSEKLA+AF ++    G+T+ V+KNLRVC DCH+  K +SK+  R  ++RD 
Sbjct: 585 EKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDA 644

Query: 632 NRFHNIVGGICSCGDYW 637
            RFH+   G CSCGDYW
Sbjct: 645 KRFHHFKDGGCSCGDYW 659

[Close]

BLAST of CmoCh06G000730 vs. TAIR 10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 471.5 bits (1212), Expect = 1.1e-132
Identity = 243/607 (40.03%), Postives = 364/607 (59.97%), Query Frame = 0


Query: 33  SNLKTLCSNGQLNEALLQMAILGSEMKFEG---YDTILNQCVSQRAIREGQRVHAHMIKT 92
           S    LC    L  A+  M  L S   +     Y  ++  C+S RA+ EG  +  H+   
Sbjct: 31  SEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFN 90

Query: 93  CYLPPVYLRTRLIVLYNKCDCLGDAREVFDEMPLRNVVSWTAMISAYSQRGFASQALNLF 152
            + P ++L   LI +Y K + L DA ++FD+MP RNV+SWT MISAYS+     +AL L 
Sbjct: 91  GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL 150

Query: 153 VAMLRSGTEPNEFTFATILTSCIGSLGFQIGRQIHSIVIKRNYESHMFVGSSLLDMYAKS 212
           V MLR    PN +T++++L SC G       R +H  +IK   ES +FV S+L+D++AK 
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKL 210

Query: 213 GRVHEAHGVFQSLPERDVVVCTAIISGYAQMGLDVEALKLFRQLQSEGMHSNYVTYASVL 272
           G   +A  VF  +   D +V  +II G+AQ      AL+LF++++  G  +   T  SVL
Sbjct: 211 GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL 270

Query: 273 TALSGLAALNHGKQVHNHVLRSGQSLNVVLLNSLIDMYSKCGNVCYARRIFDHMSERTCI 332
            A +GLA L  G Q H H+++  Q L  +L N+L+DMY KCG++  A R+F+ M ER  I
Sbjct: 271 RACTGLALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVI 330

Query: 333 SWNAMLVGYSKHGMGGEVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEHKGLEIFYN 392
           +W+ M+ G +++G   E L+LF+ M+     KP+ IT + VL  CSH  L   G   F +
Sbjct: 331 TWSTMISGLAQNGYSQEALKLFERMKSSG-TKPNYITIVGVLFACSHAGLLEDGWYYFRS 390

Query: 393 MADGKDGIEPDIEHYGCVVDLLGRVGRIEEAFDFIRKMPYVPTAAIWGSLLGSCRVHSNV 452
           M     GI+P  EHYGC++DLLG+ G++++A   + +M   P A  W +LLG+CRV  N+
Sbjct: 391 MKK-LYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 450

Query: 453 DIGIIVGQKLLEIEPENAGNYVILSNLHASAGKWEDMRNIRDLMQEKAVIKEPGRSWVEL 512
            +     +K++ ++PE+AG Y +LSN++A++ KW+ +  IR  M+++ + KEPG SW+E+
Sbjct: 451 VLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 510

Query: 513 DQIVHTFHASDHTHPRREEVARKVKELAIKFKEEGYVPNLSCVLYDVDEEQKEKVLLGHS 572
           ++ +H F   D++HP+  EV++K+ +L  +    GYVP  + VL D++ EQ E  L  HS
Sbjct: 511 NKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHS 570

Query: 573 EKLAMAFWLIAAPEGATIRVIKNLRVCVDCHSFAKFVSKLYARTIILRDKNRFHNIVGGI 632
           EKLA+AF L+  P    IR+ KNLR+C DCH F K  SKL  R+I++RD  R+H+   G 
Sbjct: 571 EKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGK 630

Query: 633 CSCGDYW 637
           CSCGDYW
Sbjct: 631 CSCGDYW 630

The following BLAST results are available for this feature:

BLAST of CmoCh06G000730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIC3	7.1e-254	68.27	Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS...	[more]
Q9LIQ7	7.6e-139	41.64	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop...	[more]
Q9STF3	1.8e-132	37.32	Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop...	[more]
Q9LW32	6.9e-132	40.03	Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop...	[more]
Q9SI53	1.5e-131	40.03	Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop...	[more]

BLAST of CmoCh06G000730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ETZ1	0.0e+00	100.00	putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS...	[more]
A0A6J1I7X7	0.0e+00	97.64	putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS...	[more]
A0A5A7TNQ9	0.0e+00	88.19	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A1S3B6T6	0.0e+00	88.19	putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS...	[more]
A0A6J1DLD3	0.0e+00	87.32	putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS...	[more]

BLAST of CmoCh06G000730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13770.1	5.1e-255	68.27	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G24000.1	8.9e-135	41.28	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G46790.1	1.3e-133	37.32	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G26782.1	4.9e-133	40.03	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G03880.1	1.1e-132	40.03	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 124..171 e-value: 6.1E-11 score: 42.3 coord: 329..375 e-value: 5.8E-9 score: 36.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 127..161 e-value: 2.5E-5 score: 22.2 coord: 201..228 e-value: 0.0026 score: 15.8 coord: 228..259 e-value: 2.9E-4 score: 18.8 coord: 329..363 e-value: 3.1E-7 score: 28.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 403..427 e-value: 0.076 score: 13.3 coord: 300..326 e-value: 0.064 score: 13.5 coord: 200..226 e-value: 0.011 score: 15.9 coord: 228..257 e-value: 1.8E-4 score: 21.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 226..260 score: 9.930995
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 125..159 score: 11.575191
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 296..330 score: 9.503505
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 502..624 e-value: 3.8E-37 score: 127.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 383..563 e-value: 5.1E-13 score: 51.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 33..175 e-value: 7.5E-23 score: 82.8 coord: 278..382 e-value: 3.1E-24 score: 87.3 coord: 176..277 e-value: 1.3E-18 score: 69.0
None	No IPR available	PANTHER	PTHR47928:SF23	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, MITOCHONDRIAL-RELATED	coord: 31..612
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 31..612

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G000730.1	CmoCh06G000730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding